AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0591490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591490 MtrunA17_Chr4g0009461 97.260 292 8 0 1 292 16 307 0.0 595
Msa0591490 MtrunA17_Chr3g0112181 34.495 287 106 11 21 290 33 254 9.69e-32 119
Msa0591490 MtrunA17_Chr5g0435711 54.737 95 36 2 20 107 23 117 1.15e-27 108
Msa0591490 MtrunA17_Chr5g0400571 40.678 177 67 9 20 190 58 202 2.95e-26 104
Msa0591490 MtrunA17_Chr2g0315591 79.070 43 8 1 36 77 41 83 3.45e-19 85.1
Msa0591490 MtrunA17_Chr1g0184381 82.051 39 7 0 38 76 29 67 3.42e-17 78.6
Msa0591490 MtrunA17_Chr7g0239441 66.667 42 14 0 44 85 37 78 6.40e-14 68.6
Msa0591490 MtrunA17_Chr4g0032111 75.000 36 9 0 43 78 20 55 6.79e-14 68.9
Msa0591490 MtrunA17_Chr1g0187231 69.444 36 11 0 44 79 18 53 5.21e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591490 AT2G37740.1 31.023 303 171 8 13 291 10 298 1.35e-27 110
Msa0591490 AT5G06070.1 45.038 131 57 4 6 121 13 143 2.81e-25 102
Msa0591490 AT4G17810.2 70.370 54 15 1 20 73 21 73 2.09e-21 90.1
Msa0591490 AT4G17810.1 70.370 54 15 1 20 73 21 73 2.30e-21 90.9
Msa0591490 AT2G42410.2 67.273 55 15 1 37 91 40 91 4.00e-19 84.7
Msa0591490 AT2G42410.1 67.273 55 15 1 37 91 40 91 4.00e-19 84.7
Msa0591490 AT2G42410.3 67.273 55 15 1 37 91 66 117 4.91e-19 85.1
Msa0591490 AT3G23130.1 81.395 43 8 0 36 78 37 79 3.13e-18 82.0
Msa0591490 AT3G09290.1 66.667 39 13 0 44 82 33 71 1.28e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACCTCCTCAATTGAATT+AGG 0.148497 4_2:+15857641 None:intergenic
AAGAATTGAAAGGAGAAATT+AGG 0.164252 4_2:+15857993 None:intergenic
AAACCACAAGTAGGAGAATT+AGG 0.187380 4_2:+15858115 None:intergenic
AAATGATCAAGATGAGAATT+AGG 0.217599 4_2:+15858073 None:intergenic
ATCACCGTCGTCGGCTTCTA+AGG 0.240586 4_2:-15858035 Msa0591490:CDS
AGAATTGAAAGGAGAAATTA+GGG 0.284723 4_2:+15857994 None:intergenic
AACCCTTCTTCTTCTTGTTA+TGG 0.304635 4_2:-15858436 Msa0591490:CDS
CCAAAGGTATAATAGATTCT+AGG 0.312053 4_2:-15857883 Msa0591490:CDS
TGTAGCTATGAGTTTGAATT+TGG 0.323022 4_2:-15857825 Msa0591490:CDS
GATGCAGCTGCTGGGTCACT+TGG 0.326814 4_2:-15858382 Msa0591490:CDS
CTTTCAATTCTTCTGAATCA+TGG 0.333118 4_2:-15857982 Msa0591490:CDS
TAATTCTCCTACTTGTGGTT+TGG 0.335006 4_2:-15858113 Msa0591490:CDS
CTTCTTGTTATGGTGATTCA+TGG 0.338824 4_2:-15858426 Msa0591490:CDS
CTACCTCCTCAATTGAATTA+GGG 0.346783 4_2:+15857642 None:intergenic
TTTAGGTCAGCACAAGCATT+AGG 0.361635 4_2:-15858307 Msa0591490:CDS
CCTAGAATCTATTATACCTT+TGG 0.378017 4_2:+15857883 None:intergenic
TCGGCTTCTAAGGCTTTATT+CGG 0.401138 4_2:-15858025 Msa0591490:CDS
TTCAATTGAGGAGGTAGATC+TGG 0.403141 4_2:-15857636 Msa0591490:CDS
GAACATAATATATCATTTCC+AGG 0.405382 4_2:+15857950 None:intergenic
GATTCTAGGTTTCGAGGTAA+AGG 0.408364 4_2:-15857869 Msa0591490:CDS
ATTCTAGGTTTCGAGGTAAA+GGG 0.409155 4_2:-15857868 Msa0591490:CDS
AACCACAAGTAGGAGAATTA+GGG 0.432833 4_2:+15858116 None:intergenic
TTTGCTGAAGATGCAGCTGC+TGG 0.433991 4_2:-15858391 Msa0591490:CDS
AATGATCAAGATGAGAATTA+GGG 0.437932 4_2:+15858074 None:intergenic
AAGTAGGAGAATTAGGGAAT+AGG 0.457191 4_2:+15858122 None:intergenic
AAGCTACAAGAATATGATCT+TGG 0.459400 4_2:+15858343 None:intergenic
TTCCCTAATTCTCCTACTTG+TGG 0.462438 4_2:-15858118 Msa0591490:CDS
AGGAGGTAGATCTGGAGTTA+AGG 0.476987 4_2:-15857628 Msa0591490:CDS
ATGCAGCTGCTGGGTCACTT+GGG 0.477889 4_2:-15858381 Msa0591490:CDS
CGATTTCAAGCTCGTGATGA+TGG 0.481881 4_2:+15858194 None:intergenic
GTTCAACCCTAATTCAATTG+AGG 0.483460 4_2:-15857648 Msa0591490:CDS
TTCTTGTTATGGTGATTCAT+GGG 0.486889 4_2:-15858425 Msa0591490:CDS
AAGATTTCAATTGCAAGAAG+AGG 0.493658 4_2:-15857754 Msa0591490:CDS
GAATCATGGCTGAATTTACC+TGG 0.500114 4_2:-15857968 Msa0591490:CDS
TGCAGCTGCTGGGTCACTTG+GGG 0.517099 4_2:-15858380 Msa0591490:CDS
GTACTCTCAAATTCAACAAG+TGG 0.518666 4_2:+15857785 None:intergenic
TCACCATAACAAGAAGAAGA+AGG 0.520396 4_2:+15858433 None:intergenic
TTCAACTTCATCACCGTCGT+CGG 0.528179 4_2:-15858044 Msa0591490:CDS
GCAGCTGCTGGGTCACTTGG+GGG 0.531991 4_2:-15858379 Msa0591490:CDS
TTGCTGAAGATGCAGCTGCT+GGG 0.542515 4_2:-15858390 Msa0591490:CDS
CTACAAGAATATGATCTTGG+TGG 0.544295 4_2:+15858346 None:intergenic
TGGAGTTAAGGCTTGGTACA+AGG 0.549906 4_2:-15857616 Msa0591490:intron
CATGATTCAGAAGAATTGAA+AGG 0.564867 4_2:+15857983 None:intergenic
GTAGATCTGGAGTTAAGGCT+TGG 0.574970 4_2:-15857623 Msa0591490:CDS
TTTGATCATAAAGTCTCCAA+AGG 0.581337 4_2:-15857899 Msa0591490:CDS
ATAATAGATTCTAGGTTTCG+AGG 0.582395 4_2:-15857875 Msa0591490:CDS
CACCATAACAAGAAGAAGAA+GGG 0.582469 4_2:+15858434 None:intergenic
TTCTAGGTTTCGAGGTAAAG+GGG 0.591482 4_2:-15857867 Msa0591490:CDS
CAACCCTAATTCAATTGAGG+AGG 0.592265 4_2:-15857645 Msa0591490:CDS
TTATAAACCAAACCACAAGT+AGG 0.601660 4_2:+15858106 None:intergenic
TTTACTGCAACTATATACAC+AGG 0.614043 4_2:-15857364 Msa0591490:CDS
TCTAGGTTTCGAGGTAAAGG+GGG 0.621509 4_2:-15857866 Msa0591490:CDS
AGGTCAGCACAAGCATTAGG+TGG 0.642240 4_2:-15858304 Msa0591490:CDS
AACAACTTTGCAGATATCTG+AGG 0.662909 4_2:+15857400 None:intergenic
AAAGCCTTAGAAGCCGACGA+CGG 0.693193 4_2:+15858031 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAACATTTTGAATAAG+TGG + chr4_2:15857660-15857679 None:intergenic 15.0%
!!! TTATAAACATTTTGAATAAG+TGG + chr4_2:15857660-15857679 None:intergenic 15.0%
!!! CATATTTTGTTGTTTATCAA+AGG + chr4_2:15858123-15858142 None:intergenic 20.0%
!!! TTGATTTGTTTTTTTTCATG+AGG - chr4_2:15858379-15858398 Msa0591490:CDS 20.0%
!!! TGATTTGTTTTTTTTCATGA+GGG - chr4_2:15858380-15858399 Msa0591490:CDS 20.0%
!!! CATATTTTGTTGTTTATCAA+AGG + chr4_2:15858123-15858142 None:intergenic 20.0%
!!! TTGATTTGTTTTTTTTCATG+AGG - chr4_2:15858379-15858398 Msa0591490:CDS 20.0%
!!! TGATTTGTTTTTTTTCATGA+GGG - chr4_2:15858380-15858399 Msa0591490:CDS 20.0%
!! TAAAGAATCTGATCATTTTG+TGG + chr4_2:15857576-15857595 None:intergenic 25.0%
! AATGATCAAGATGAGAATTA+GGG + chr4_2:15857737-15857756 None:intergenic 25.0%
! AAATGATCAAGATGAGAATT+AGG + chr4_2:15857738-15857757 None:intergenic 25.0%
! AGAATTGAAAGGAGAAATTA+GGG + chr4_2:15857817-15857836 None:intergenic 25.0%
! AAGAATTGAAAGGAGAAATT+AGG + chr4_2:15857818-15857837 None:intergenic 25.0%
! GAACATAATATATCATTTCC+AGG + chr4_2:15857861-15857880 None:intergenic 25.0%
! ATGTTCATTAAGAACAATGA+AGG + chr4_2:15858269-15858288 None:intergenic 25.0%
! CTTAATTTCTTTACCTTACA+AGG - chr4_2:15858340-15858359 Msa0591490:CDS 25.0%
!! TAAAGAATCTGATCATTTTG+TGG + chr4_2:15857576-15857595 None:intergenic 25.0%
! AATGATCAAGATGAGAATTA+GGG + chr4_2:15857737-15857756 None:intergenic 25.0%
! AAATGATCAAGATGAGAATT+AGG + chr4_2:15857738-15857757 None:intergenic 25.0%
! AGAATTGAAAGGAGAAATTA+GGG + chr4_2:15857817-15857836 None:intergenic 25.0%
! AAGAATTGAAAGGAGAAATT+AGG + chr4_2:15857818-15857837 None:intergenic 25.0%
! GAACATAATATATCATTTCC+AGG + chr4_2:15857861-15857880 None:intergenic 25.0%
! ATGTTCATTAAGAACAATGA+AGG + chr4_2:15858269-15858288 None:intergenic 25.0%
! CTTAATTTCTTTACCTTACA+AGG - chr4_2:15858340-15858359 Msa0591490:CDS 25.0%
! TTCTTGTTATGGTGATTCAT+GGG - chr4_2:15857383-15857402 Msa0591490:CDS 30.0%
AAGCTACAAGAATATGATCT+TGG + chr4_2:15857468-15857487 None:intergenic 30.0%
TTATAAACCAAACCACAAGT+AGG + chr4_2:15857705-15857724 None:intergenic 30.0%
CATGATTCAGAAGAATTGAA+AGG + chr4_2:15857828-15857847 None:intergenic 30.0%
CTTTCAATTCTTCTGAATCA+TGG - chr4_2:15857826-15857845 Msa0591490:CDS 30.0%
TTTGATCATAAAGTCTCCAA+AGG - chr4_2:15857909-15857928 Msa0591490:CDS 30.0%
CCTAGAATCTATTATACCTT+TGG + chr4_2:15857928-15857947 None:intergenic 30.0%
! CCAAAGGTATAATAGATTCT+AGG - chr4_2:15857925-15857944 Msa0591490:CDS 30.0%
ATAATAGATTCTAGGTTTCG+AGG - chr4_2:15857933-15857952 Msa0591490:CDS 30.0%
TGTAGCTATGAGTTTGAATT+TGG - chr4_2:15857983-15858002 Msa0591490:CDS 30.0%
AAGATTTCAATTGCAAGAAG+AGG - chr4_2:15858054-15858073 Msa0591490:CDS 30.0%
! TATGCTACTTAACTATACCT+TGG + chr4_2:15858219-15858238 None:intergenic 30.0%
TGATGAAAAACTTCCTTGTA+AGG + chr4_2:15858356-15858375 None:intergenic 30.0%
TTTACTGCAACTATATACAC+AGG - chr4_2:15858444-15858463 Msa0591490:CDS 30.0%
! TTCTTGTTATGGTGATTCAT+GGG - chr4_2:15857383-15857402 Msa0591490:CDS 30.0%
AAGCTACAAGAATATGATCT+TGG + chr4_2:15857468-15857487 None:intergenic 30.0%
TTATAAACCAAACCACAAGT+AGG + chr4_2:15857705-15857724 None:intergenic 30.0%
CATGATTCAGAAGAATTGAA+AGG + chr4_2:15857828-15857847 None:intergenic 30.0%
CTTTCAATTCTTCTGAATCA+TGG - chr4_2:15857826-15857845 Msa0591490:CDS 30.0%
TTTGATCATAAAGTCTCCAA+AGG - chr4_2:15857909-15857928 Msa0591490:CDS 30.0%
CCTAGAATCTATTATACCTT+TGG + chr4_2:15857928-15857947 None:intergenic 30.0%
! CCAAAGGTATAATAGATTCT+AGG - chr4_2:15857925-15857944 Msa0591490:CDS 30.0%
ATAATAGATTCTAGGTTTCG+AGG - chr4_2:15857933-15857952 Msa0591490:CDS 30.0%
TGTAGCTATGAGTTTGAATT+TGG - chr4_2:15857983-15858002 Msa0591490:CDS 30.0%
AAGATTTCAATTGCAAGAAG+AGG - chr4_2:15858054-15858073 Msa0591490:CDS 30.0%
! TATGCTACTTAACTATACCT+TGG + chr4_2:15858219-15858238 None:intergenic 30.0%
TGATGAAAAACTTCCTTGTA+AGG + chr4_2:15858356-15858375 None:intergenic 30.0%
TTTACTGCAACTATATACAC+AGG - chr4_2:15858444-15858463 Msa0591490:CDS 30.0%
AACCCTTCTTCTTCTTGTTA+TGG - chr4_2:15857372-15857391 Msa0591490:CDS 35.0%
CACCATAACAAGAAGAAGAA+GGG + chr4_2:15857377-15857396 None:intergenic 35.0%
TCACCATAACAAGAAGAAGA+AGG + chr4_2:15857378-15857397 None:intergenic 35.0%
! CTTCTTGTTATGGTGATTCA+TGG - chr4_2:15857382-15857401 Msa0591490:CDS 35.0%
CTACAAGAATATGATCTTGG+TGG + chr4_2:15857465-15857484 None:intergenic 35.0%
! GCTTTTGTAGAAGAGAGTTT+AGG - chr4_2:15857484-15857503 Msa0591490:intron 35.0%
AAGTAGGAGAATTAGGGAAT+AGG + chr4_2:15857689-15857708 None:intergenic 35.0%
AACCACAAGTAGGAGAATTA+GGG + chr4_2:15857695-15857714 None:intergenic 35.0%
AAACCACAAGTAGGAGAATT+AGG + chr4_2:15857696-15857715 None:intergenic 35.0%
TAATTCTCCTACTTGTGGTT+TGG - chr4_2:15857695-15857714 Msa0591490:CDS 35.0%
ATTCTAGGTTTCGAGGTAAA+GGG - chr4_2:15857940-15857959 Msa0591490:CDS 35.0%
GTACTCTCAAATTCAACAAG+TGG + chr4_2:15858026-15858045 None:intergenic 35.0%
GTTCAACCCTAATTCAATTG+AGG - chr4_2:15858160-15858179 Msa0591490:CDS 35.0%
CTACCTCCTCAATTGAATTA+GGG + chr4_2:15858169-15858188 None:intergenic 35.0%
TCTACCTCCTCAATTGAATT+AGG + chr4_2:15858170-15858189 None:intergenic 35.0%
AACAACTTTGCAGATATCTG+AGG + chr4_2:15858411-15858430 None:intergenic 35.0%
AACCCTTCTTCTTCTTGTTA+TGG - chr4_2:15857372-15857391 Msa0591490:CDS 35.0%
CACCATAACAAGAAGAAGAA+GGG + chr4_2:15857377-15857396 None:intergenic 35.0%
TCACCATAACAAGAAGAAGA+AGG + chr4_2:15857378-15857397 None:intergenic 35.0%
! CTTCTTGTTATGGTGATTCA+TGG - chr4_2:15857382-15857401 Msa0591490:CDS 35.0%
CTACAAGAATATGATCTTGG+TGG + chr4_2:15857465-15857484 None:intergenic 35.0%
! GCTTTTGTAGAAGAGAGTTT+AGG - chr4_2:15857484-15857503 Msa0591490:intron 35.0%
AAGTAGGAGAATTAGGGAAT+AGG + chr4_2:15857689-15857708 None:intergenic 35.0%
AACCACAAGTAGGAGAATTA+GGG + chr4_2:15857695-15857714 None:intergenic 35.0%
AAACCACAAGTAGGAGAATT+AGG + chr4_2:15857696-15857715 None:intergenic 35.0%
TAATTCTCCTACTTGTGGTT+TGG - chr4_2:15857695-15857714 Msa0591490:CDS 35.0%
ATTCTAGGTTTCGAGGTAAA+GGG - chr4_2:15857940-15857959 Msa0591490:CDS 35.0%
GTACTCTCAAATTCAACAAG+TGG + chr4_2:15858026-15858045 None:intergenic 35.0%
GTTCAACCCTAATTCAATTG+AGG - chr4_2:15858160-15858179 Msa0591490:CDS 35.0%
CTACCTCCTCAATTGAATTA+GGG + chr4_2:15858169-15858188 None:intergenic 35.0%
TCTACCTCCTCAATTGAATT+AGG + chr4_2:15858170-15858189 None:intergenic 35.0%
AACAACTTTGCAGATATCTG+AGG + chr4_2:15858411-15858430 None:intergenic 35.0%
TTTAGGTCAGCACAAGCATT+AGG - chr4_2:15857501-15857520 Msa0591490:intron 40.0%
TTCCCTAATTCTCCTACTTG+TGG - chr4_2:15857690-15857709 Msa0591490:CDS 40.0%
!! TCGGCTTCTAAGGCTTTATT+CGG - chr4_2:15857783-15857802 Msa0591490:CDS 40.0%
GAATCATGGCTGAATTTACC+TGG - chr4_2:15857840-15857859 Msa0591490:CDS 40.0%
GATTCTAGGTTTCGAGGTAA+AGG - chr4_2:15857939-15857958 Msa0591490:CDS 40.0%
TTCTAGGTTTCGAGGTAAAG+GGG - chr4_2:15857941-15857960 Msa0591490:CDS 40.0%
CAACCCTAATTCAATTGAGG+AGG - chr4_2:15858163-15858182 Msa0591490:CDS 40.0%
TTCAATTGAGGAGGTAGATC+TGG - chr4_2:15858172-15858191 Msa0591490:CDS 40.0%
TTTAGGTCAGCACAAGCATT+AGG - chr4_2:15857501-15857520 Msa0591490:intron 40.0%
TTCCCTAATTCTCCTACTTG+TGG - chr4_2:15857690-15857709 Msa0591490:CDS 40.0%
!! TCGGCTTCTAAGGCTTTATT+CGG - chr4_2:15857783-15857802 Msa0591490:CDS 40.0%
GAATCATGGCTGAATTTACC+TGG - chr4_2:15857840-15857859 Msa0591490:CDS 40.0%
GATTCTAGGTTTCGAGGTAA+AGG - chr4_2:15857939-15857958 Msa0591490:CDS 40.0%
TTCTAGGTTTCGAGGTAAAG+GGG - chr4_2:15857941-15857960 Msa0591490:CDS 40.0%
CAACCCTAATTCAATTGAGG+AGG - chr4_2:15858163-15858182 Msa0591490:CDS 40.0%
TTCAATTGAGGAGGTAGATC+TGG - chr4_2:15858172-15858191 Msa0591490:CDS 40.0%
CGATTTCAAGCTCGTGATGA+TGG + chr4_2:15857617-15857636 None:intergenic 45.0%
TTCAACTTCATCACCGTCGT+CGG - chr4_2:15857764-15857783 Msa0591490:CDS 45.0%
TCTAGGTTTCGAGGTAAAGG+GGG - chr4_2:15857942-15857961 Msa0591490:CDS 45.0%
! AGGAGGTAGATCTGGAGTTA+AGG - chr4_2:15858180-15858199 Msa0591490:CDS 45.0%
! GTAGATCTGGAGTTAAGGCT+TGG - chr4_2:15858185-15858204 Msa0591490:CDS 45.0%
! TGGAGTTAAGGCTTGGTACA+AGG - chr4_2:15858192-15858211 Msa0591490:CDS 45.0%
CGATTTCAAGCTCGTGATGA+TGG + chr4_2:15857617-15857636 None:intergenic 45.0%
TTCAACTTCATCACCGTCGT+CGG - chr4_2:15857764-15857783 Msa0591490:CDS 45.0%
TCTAGGTTTCGAGGTAAAGG+GGG - chr4_2:15857942-15857961 Msa0591490:CDS 45.0%
! AGGAGGTAGATCTGGAGTTA+AGG - chr4_2:15858180-15858199 Msa0591490:CDS 45.0%
! GTAGATCTGGAGTTAAGGCT+TGG - chr4_2:15858185-15858204 Msa0591490:CDS 45.0%
! TGGAGTTAAGGCTTGGTACA+AGG - chr4_2:15858192-15858211 Msa0591490:CDS 45.0%
TTTGCTGAAGATGCAGCTGC+TGG - chr4_2:15857417-15857436 Msa0591490:CDS 50.0%
TTGCTGAAGATGCAGCTGCT+GGG - chr4_2:15857418-15857437 Msa0591490:CDS 50.0%
GGTCACTTGGGGGATGTATA+TGG - chr4_2:15857439-15857458 Msa0591490:CDS 50.0%
AGGTCAGCACAAGCATTAGG+TGG - chr4_2:15857504-15857523 Msa0591490:intron 50.0%
AAAGCCTTAGAAGCCGACGA+CGG + chr4_2:15857780-15857799 None:intergenic 50.0%
! AAGGCTTGGTACAAGGTCCA+AGG - chr4_2:15858199-15858218 Msa0591490:CDS 50.0%
TTTGCTGAAGATGCAGCTGC+TGG - chr4_2:15857417-15857436 Msa0591490:CDS 50.0%
TTGCTGAAGATGCAGCTGCT+GGG - chr4_2:15857418-15857437 Msa0591490:CDS 50.0%
GGTCACTTGGGGGATGTATA+TGG - chr4_2:15857439-15857458 Msa0591490:CDS 50.0%
AGGTCAGCACAAGCATTAGG+TGG - chr4_2:15857504-15857523 Msa0591490:intron 50.0%
AAAGCCTTAGAAGCCGACGA+CGG + chr4_2:15857780-15857799 None:intergenic 50.0%
! AAGGCTTGGTACAAGGTCCA+AGG - chr4_2:15858199-15858218 Msa0591490:CDS 50.0%
ATGCAGCTGCTGGGTCACTT+GGG - chr4_2:15857427-15857446 Msa0591490:CDS 55.0%
!! ATCACCGTCGTCGGCTTCTA+AGG - chr4_2:15857773-15857792 Msa0591490:CDS 55.0%
ATGCAGCTGCTGGGTCACTT+GGG - chr4_2:15857427-15857446 Msa0591490:CDS 55.0%
!! ATCACCGTCGTCGGCTTCTA+AGG - chr4_2:15857773-15857792 Msa0591490:CDS 55.0%
GATGCAGCTGCTGGGTCACT+TGG - chr4_2:15857426-15857445 Msa0591490:CDS 60.0%
TGCAGCTGCTGGGTCACTTG+GGG - chr4_2:15857428-15857447 Msa0591490:CDS 60.0%
GATGCAGCTGCTGGGTCACT+TGG - chr4_2:15857426-15857445 Msa0591490:CDS 60.0%
TGCAGCTGCTGGGTCACTTG+GGG - chr4_2:15857428-15857447 Msa0591490:CDS 60.0%
GCAGCTGCTGGGTCACTTGG+GGG - chr4_2:15857429-15857448 Msa0591490:CDS 65.0%
GCAGCTGCTGGGTCACTTGG+GGG - chr4_2:15857429-15857448 Msa0591490:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 15857339 15858491 15857339 ID=Msa0591490;Name=Msa0591490
chr4_2 mRNA 15857339 15858491 15857339 ID=Msa0591490-mRNA-1;Parent=Msa0591490;Name=Msa0591490-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0|0|2|0|334
chr4_2 exon 15857617 15858491 15857617 ID=Msa0591490-mRNA-1:exon:4582;Parent=Msa0591490-mRNA-1
chr4_2 exon 15857339 15857468 15857339 ID=Msa0591490-mRNA-1:exon:4581;Parent=Msa0591490-mRNA-1
chr4_2 CDS 15857617 15858491 15857617 ID=Msa0591490-mRNA-1:cds;Parent=Msa0591490-mRNA-1
chr4_2 CDS 15857339 15857468 15857339 ID=Msa0591490-mRNA-1:cds;Parent=Msa0591490-mRNA-1
Gene Sequence

>Msa0591490

ATGAGTAATTCAAATCTTGCTAGTTCACTAACTAACCCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCATTTGCTGAAGATGCAGCTGCTGGGTCACTTGGGGGATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTCAAACAACAACCACAAAATGATCAGATTCTTTATCATAATCATCATCATCACCATCATCACGAGCTTGAAATCGCTACTCATCATGTTCAAAAGCCACTTATTCAAAATGTTTATAATAATAACCTATTCCCTAATTCTCCTACTTGTGGTTTGGTTTATAATAAAACTAACCCTAATTCTCATCTTGATCATTTCATATCTTCAACTTCATCACCGTCGTCGGCTTCTAAGGCTTTATTCGGAGATGAAACCCTAATTTCTCCTTTCAATTCTTCTGAATCATGGCTGAATTTACCTGGAAATGATATATTATGTTCAACAAAGTTTCAACTTGCTGTTGATAATTTTGATCATAAAGTCTCCAAAGGTATAATAGATTCTAGGTTTCGAGGTAAAGGGGGAAACGACAACGAAAGTGATGTAGCTATGAGTTTGAATTTGGTTTTGTGTAGAACTCATCCACTTGTTGAATTTGAGAGTACTAAAGAAGAAGATTTCAATTGCAAGAAGAGGAAAAAAGATTCTTCATCAAATCAATTATTCTCTAACTCAAGCACCTTTGATAAACAACAAAATATGCAAGCAAAGATGTTTGAGTTCAACCCTAATTCAATTGAGGAGGTAGATCTGGAGTTAAGGCTTGGTACAAGGAAGTTTTTCATCATGTTTGATTTGTTTTTTTTCATGAGGGTTCAGCCTCAGATATCTGCAAAGTTGTTTGTCATGATAGCATTTACTGCAACTATATACACAGGCTTTTGTAAACTTCTTCTTCTTTGA

Protein sequence

>Msa0591490

MSNSNLASSLTNPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQPQNDQILYHNHHHHHHHELEIATHHVQKPLIQNVYNNNLFPNSPTCGLVYNKTNPNSHLDHFISSTSSPSSASKALFGDETLISPFNSSESWLNLPGNDILCSTKFQLAVDNFDHKVSKGIIDSRFRGKGGNDNESDVAMSLNLVLCRTHPLVEFESTKEEDFNCKKRKKDSSSNQLFSNSSTFDKQQNMQAKMFEFNPNSIEEVDLELRLGTRKFFIMFDLFFFMRVQPQISAKLFVMIAFTATIYTGFCKLLLL*