AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414480 MtrunA17_Chr3g0107511 94.154 479 28 0 3 481 4 482 0.0 939
Msa0414480 MtrunA17_Chr3g0107501 80.417 480 94 0 1 480 2 481 0.0 804
Msa0414480 MtrunA17_Chr5g0443731 42.316 449 255 4 29 476 26 471 8.81e-122 364
Msa0414480 MtrunA17_Chr8g0388921 35.729 473 294 5 6 476 13 477 2.03e-104 320
Msa0414480 MtrunA17_Chr5g0443401 34.375 480 303 5 3 476 4 477 2.74e-104 319
Msa0414480 MtrunA17_Chr8g0380471 37.317 477 283 9 7 475 7 475 3.63e-102 314
Msa0414480 MtrunA17_Chr5g0408181 33.403 479 290 13 7 476 5 463 4.69e-74 241
Msa0414480 MtrunA17_Chr4g0044851 31.448 442 290 5 32 472 37 466 4.63e-69 228
Msa0414480 MtrunA17_Chr5g0403931 30.515 485 323 7 3 479 5 483 1.00e-68 227
Msa0414480 MtrunA17_Chr1g0153371 31.838 468 306 7 7 472 9 465 2.47e-68 226
Msa0414480 MtrunA17_Chr1g0164371 31.277 470 309 6 5 473 17 473 3.76e-68 226
Msa0414480 MtrunA17_Chr8g0369791 33.261 460 283 12 19 473 22 462 5.11e-68 225
Msa0414480 MtrunA17_Chr8g0380931 29.956 454 299 9 29 473 59 502 4.83e-67 223
Msa0414480 MtrunA17_Chr4g0044841 30.937 459 302 8 18 473 23 469 1.16e-63 214
Msa0414480 MtrunA17_Chr8g0341951 28.728 456 314 5 7 461 12 457 1.22e-60 206
Msa0414480 MtrunA17_Chr2g0293411 28.216 482 332 8 6 479 15 490 3.99e-59 202
Msa0414480 MtrunA17_Chr5g0397971 26.115 471 337 5 8 473 3 467 2.90e-58 199
Msa0414480 MtrunA17_Chr3g0141801 29.087 471 308 9 4 462 13 469 2.58e-57 197
Msa0414480 MtrunA17_Chr8g0381541 28.829 444 300 8 32 466 43 479 1.84e-56 195
Msa0414480 MtrunA17_Chr5g0400421 28.352 455 315 8 24 473 39 487 3.88e-56 194
Msa0414480 MtrunA17_Chr5g0400411 28.414 454 315 7 24 473 39 486 1.36e-55 192
Msa0414480 MtrunA17_Chr7g0226771 28.194 454 309 8 1 448 1 443 5.17e-54 188
Msa0414480 MtrunA17_Chr8g0373441 30.075 399 264 6 12 404 15 404 8.00e-54 186
Msa0414480 MtrunA17_Chr2g0293421 27.876 452 316 7 31 478 44 489 1.02e-53 187
Msa0414480 MtrunA17_Chr8g0381571 29.216 421 282 8 32 443 43 456 1.15e-53 187
Msa0414480 MtrunA17_Chr3g0113321 28.540 452 291 9 32 467 29 464 1.90e-53 187
Msa0414480 MtrunA17_Chr7g0219961 27.389 471 318 13 6 473 11 460 1.44e-50 178
Msa0414480 MtrunA17_Chr3g0078411 26.793 474 316 11 6 472 11 460 8.31e-49 174
Msa0414480 MtrunA17_Chr8g0372711 26.949 449 311 9 7 449 20 457 8.34e-49 174
Msa0414480 MtrunA17_Chr8g0372411 28.235 425 284 8 33 448 40 452 1.38e-48 174
Msa0414480 MtrunA17_Chr8g0339861 29.955 444 290 9 32 466 45 476 3.66e-48 172
Msa0414480 MtrunA17_Chr6g0455461 26.793 474 316 12 6 472 11 460 4.57e-48 172
Msa0414480 MtrunA17_Chr3g0089361 26.240 484 319 14 4 472 13 473 3.70e-40 150
Msa0414480 MtrunA17_Chr6g0478161 25.821 457 312 10 7 451 25 466 2.65e-38 145
Msa0414480 MtrunA17_Chr3g0089351 25.672 409 279 11 71 472 1 391 2.88e-38 144
Msa0414480 MtrunA17_Chr8g0381551 26.282 312 205 9 32 334 43 338 4.62e-25 105
Msa0414480 MtrunA17_Chr1g0161671 25.868 317 213 8 6 311 6 311 7.02e-24 102
Msa0414480 MtrunA17_Chr5g0404881 30.870 230 141 7 6 225 8 229 5.45e-22 94.7
Msa0414480 MtrunA17_Chr8g0334891 24.890 454 294 17 23 453 30 459 1.64e-21 97.4
Msa0414480 MtrunA17_Chr4g0000171 26.056 284 200 6 26 304 37 315 6.83e-21 93.6
Msa0414480 MtrunA17_Chr6g0463551 35.393 178 108 3 198 369 13 189 8.23e-21 90.5
Msa0414480 MtrunA17_Chr4g0013471 26.537 309 195 6 26 318 37 329 8.81e-20 91.3
Msa0414480 MtrunA17_Chr4g0047631 23.779 471 317 16 6 448 22 478 9.91e-20 92.0
Msa0414480 MtrunA17_Chr8g0334941 26.978 278 178 9 192 453 36 304 1.23e-19 90.1
Msa0414480 MtrunA17_Chr6g0458561 24.224 483 297 17 5 439 25 486 1.39e-19 91.7
Msa0414480 MtrunA17_Chr4g0000161 25.818 275 194 6 23 292 34 303 1.61e-19 89.7
Msa0414480 MtrunA17_Chr5g0436981 30.435 138 87 1 32 160 28 165 4.19e-19 85.5
Msa0414480 MtrunA17_Chr2g0286091 22.268 485 326 15 27 478 36 502 5.78e-19 89.7
Msa0414480 MtrunA17_Chr0c19g0493771 30.256 195 121 4 255 444 430 614 1.51e-18 89.0
Msa0414480 MtrunA17_Chr4g0047691 23.301 412 286 12 61 448 76 481 5.72e-18 86.7
Msa0414480 MtrunA17_Chr5g0404861 33.083 133 89 0 316 448 1 133 6.17e-18 80.9
Msa0414480 MtrunA17_Chr1g0205361 24.684 474 306 16 6 448 10 463 1.24e-17 85.5
Msa0414480 MtrunA17_Chr4g0058231 24.025 487 305 18 6 448 2 467 1.51e-17 85.1
Msa0414480 MtrunA17_Chr2g0314721 24.797 492 311 15 7 462 19 487 2.15e-17 84.7
Msa0414480 MtrunA17_Chr1g0160851 23.555 467 320 13 6 448 10 463 3.76e-17 84.0
Msa0414480 MtrunA17_Chr8g0339331 23.786 412 266 14 67 439 71 473 8.59e-17 82.8
Msa0414480 MtrunA17_Chr6g0466901 24.324 518 322 20 14 476 13 515 1.52e-16 82.0
Msa0414480 MtrunA17_Chr2g0314731 23.770 488 321 18 6 462 9 476 2.56e-16 81.3
Msa0414480 MtrunA17_Chr5g0409051 22.851 477 320 18 13 449 10 478 2.98e-16 81.3
Msa0414480 MtrunA17_Chr6g0466941 24.046 524 317 21 14 476 13 516 1.35e-15 79.3
Msa0414480 MtrunA17_Chr4g0000151 32.558 129 84 2 337 465 6 131 1.39e-15 73.9
Msa0414480 MtrunA17_Chr4g0047661 28.502 207 139 4 247 448 281 483 1.99e-15 78.6
Msa0414480 MtrunA17_Chr6g0451681 22.382 487 321 14 2 475 32 474 2.50e-15 78.2
Msa0414480 MtrunA17_Chr3g0116741 27.586 203 132 6 254 448 286 481 2.67e-15 78.2
Msa0414480 MtrunA17_Chr6g0463541 34.783 92 57 1 366 457 3 91 2.75e-15 72.0
Msa0414480 MtrunA17_Chr5g0437001 36.111 108 68 1 337 443 1 108 2.99e-15 73.2
Msa0414480 MtrunA17_Chr3g0101731 23.673 452 309 14 4 431 11 450 4.48e-15 77.4
Msa0414480 MtrunA17_Chr3g0101601 22.650 468 310 16 14 448 15 463 9.93e-15 76.3
Msa0414480 MtrunA17_Chr3g0104351 24.671 304 203 9 156 434 171 473 1.31e-14 76.3
Msa0414480 MtrunA17_Chr1g0164321 21.867 375 238 14 151 478 183 549 1.81e-14 75.9
Msa0414480 MtrunA17_Chr7g0260831 25.587 383 221 16 100 431 85 454 1.91e-14 75.5
Msa0414480 MtrunA17_Chr6g0472311 28.922 204 132 5 253 449 286 483 3.15e-14 75.1
Msa0414480 MtrunA17_Chr4g0047641 27.363 201 137 4 253 448 286 482 3.49e-14 74.7
Msa0414480 MtrunA17_Chr6g0463561 30.714 140 95 2 7 145 14 152 3.80e-14 71.2
Msa0414480 MtrunA17_Chr8g0381561 32.407 108 71 1 336 443 2 107 5.25e-14 68.9
Msa0414480 MtrunA17_Chr2g0310391 20.127 472 325 13 6 442 3 457 6.38e-14 73.9
Msa0414480 MtrunA17_Chr4g0058281 28.655 171 113 4 282 448 314 479 9.92e-14 73.6
Msa0414480 MtrunA17_Chr8g0382901 21.749 446 310 12 25 452 21 445 1.19e-13 73.6
Msa0414480 MtrunA17_Chr5g0401691 22.222 513 333 21 6 478 25 511 1.42e-13 72.8
Msa0414480 MtrunA17_Chr8g0351801 28.372 215 130 5 251 448 277 484 1.56e-13 72.8
Msa0414480 MtrunA17_Chr3g0101671 24.169 451 285 18 27 439 33 464 2.34e-13 72.0
Msa0414480 MtrunA17_Chr4g0039901 24.826 431 287 13 22 427 26 444 2.95e-13 72.0
Msa0414480 MtrunA17_Chr3g0094171 23.395 483 303 20 12 448 14 475 3.39e-13 71.6
Msa0414480 MtrunA17_Chr4g0030701 29.891 184 119 2 283 460 311 490 3.62e-13 71.6
Msa0414480 MtrunA17_Chr2g0313821 21.497 521 320 18 7 461 8 505 4.77e-13 71.2
Msa0414480 MtrunA17_Chr3g0089381 25.287 174 122 3 196 369 27 192 9.63e-13 67.4
Msa0414480 MtrunA17_Chr3g0094231 23.491 464 309 16 23 455 27 475 1.07e-12 70.1
Msa0414480 MtrunA17_Chr8g0344191 21.237 485 317 17 6 448 43 504 1.14e-12 70.1
Msa0414480 MtrunA17_Chr3g0101711 22.294 462 300 16 12 431 9 453 1.32e-12 69.7
Msa0414480 MtrunA17_Chr4g0053621 21.687 498 319 17 1 455 1 470 1.44e-12 69.7
Msa0414480 MtrunA17_Chr2g0280121 23.312 459 289 21 66 476 66 509 1.46e-12 69.7
Msa0414480 MtrunA17_Chr1g0174441 19.960 501 345 12 6 467 30 513 1.60e-12 69.7
Msa0414480 MtrunA17_Chr3g0101611 22.708 480 322 18 26 474 32 493 1.94e-12 69.3
Msa0414480 MtrunA17_Chr1g0161651 21.519 316 190 6 6 266 6 318 2.00e-12 68.2
Msa0414480 MtrunA17_Chr4g0004481 25.806 186 133 3 254 434 264 449 2.01e-12 69.3
Msa0414480 MtrunA17_Chr4g0038271 22.605 261 180 8 234 476 304 560 2.48e-12 68.9
Msa0414480 MtrunA17_Chr4g0004601 22.500 400 271 15 61 434 102 488 2.52e-12 68.9
Msa0414480 MtrunA17_Chr1g0151221 26.172 256 163 10 215 457 265 507 2.92e-12 68.9
Msa0414480 MtrunA17_Chr5g0445451 20.788 457 312 18 8 431 10 449 4.12e-12 68.2
Msa0414480 MtrunA17_Chr3g0101571 21.477 447 312 13 32 452 36 469 4.26e-12 68.2
Msa0414480 MtrunA17_Chr7g0235261 22.785 395 264 12 67 434 87 467 6.22e-12 67.8
Msa0414480 MtrunA17_Chr7g0235551 19.552 491 324 12 6 448 7 474 7.15e-12 67.4
Msa0414480 MtrunA17_Chr2g0334021 20.825 485 317 16 38 479 41 501 8.71e-12 67.4
Msa0414480 MtrunA17_Chr2g0313791 24.896 241 156 7 214 439 243 473 8.90e-12 67.4
Msa0414480 MtrunA17_Chr2g0307291 26.009 223 140 8 228 435 264 476 9.17e-12 67.4
Msa0414480 MtrunA17_Chr4g0074581 23.624 436 281 13 29 425 66 488 9.81e-12 67.0
Msa0414480 MtrunA17_Chr2g0313751 25.182 274 181 8 205 461 266 532 1.29e-11 66.6
Msa0414480 MtrunA17_Chr4g0035921 21.397 458 310 16 33 452 38 483 1.37e-11 66.6
Msa0414480 MtrunA17_Chr8g0344181 23.413 504 294 21 31 476 37 506 1.38e-11 66.6
Msa0414480 MtrunA17_Chr5g0403351 22.041 490 324 17 4 455 10 479 2.04e-11 66.2
Msa0414480 MtrunA17_Chr7g0258221 22.505 511 294 17 1 448 1 472 2.27e-11 65.9
Msa0414480 MtrunA17_Chr7g0265611 20.667 450 310 13 16 431 30 466 2.39e-11 65.9
Msa0414480 MtrunA17_Chr6g0451781 26.122 245 161 8 221 453 291 527 2.80e-11 65.9
Msa0414480 MtrunA17_Chr1g0160861 24.194 310 211 9 165 455 10 314 3.04e-11 64.7
Msa0414480 MtrunA17_Chr3g0101831 22.467 454 305 13 8 431 15 451 3.87e-11 65.1
Msa0414480 MtrunA17_Chr5g0429651 20.557 467 302 17 18 434 18 465 3.92e-11 65.1
Msa0414480 MtrunA17_Chr8g0372251 25.114 219 145 3 224 427 236 450 3.95e-11 65.1
Msa0414480 MtrunA17_Chr7g0260821 27.805 205 127 7 236 431 263 455 4.51e-11 65.1
Msa0414480 MtrunA17_Chr1g0205371 23.251 486 317 16 6 455 9 474 4.83e-11 64.7
Msa0414480 MtrunA17_Chr4g0046681 26.027 219 128 8 282 481 31 234 4.85e-11 62.8
Msa0414480 MtrunA17_Chr7g0248991 29.333 150 95 3 255 403 212 351 5.02e-11 64.3
Msa0414480 MtrunA17_Chr4g0030711 29.121 182 117 3 283 457 314 490 6.40e-11 64.7
Msa0414480 MtrunA17_Chr8g0370651 25.676 222 154 4 235 449 275 492 7.25e-11 64.3
Msa0414480 MtrunA17_Chr2g0313761 24.506 253 161 8 229 461 258 500 8.17e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414480 AT5G36110.1 37.284 464 273 8 21 476 23 476 3.52e-91 286
Msa0414480 AT2G42850.1 32.809 445 291 5 35 478 48 485 1.22e-87 277
Msa0414480 AT5G45340.1 32.976 467 292 9 10 474 13 460 2.68e-76 247
Msa0414480 AT4G19230.1 33.404 470 290 9 6 471 7 457 1.08e-74 243
Msa0414480 AT4G19230.2 33.778 450 275 9 6 451 7 437 2.84e-71 234
Msa0414480 AT5G45340.2 33.486 436 269 9 10 443 13 429 5.93e-71 232
Msa0414480 AT2G29090.2 30.549 455 295 6 26 475 43 481 2.23e-67 224
Msa0414480 AT2G29090.1 30.549 455 295 6 26 475 43 481 2.23e-67 224
Msa0414480 AT3G19270.2 30.213 470 305 9 4 469 9 459 1.66e-65 219
Msa0414480 AT3G19270.1 30.180 444 287 9 4 443 9 433 1.99e-61 207
Msa0414480 AT5G36110.2 35.890 365 219 6 21 378 23 379 4.50e-59 199
Msa0414480 AT1G12740.1 27.191 445 313 7 32 473 31 467 1.10e-58 201
Msa0414480 AT1G05160.2 27.178 482 337 8 2 473 10 487 1.87e-56 195
Msa0414480 AT1G05160.1 27.178 482 337 8 2 473 10 487 1.87e-56 195
Msa0414480 AT2G32440.2 28.750 480 324 10 5 473 12 484 2.26e-56 195
Msa0414480 AT2G32440.1 28.750 480 324 10 5 473 12 484 2.26e-56 195
Msa0414480 AT3G13730.1 29.851 469 291 12 23 474 42 489 2.70e-56 195
Msa0414480 AT1G12740.4 26.829 451 313 8 32 473 31 473 3.78e-56 194
Msa0414480 AT1G12740.2 26.608 451 314 8 32 473 31 473 5.85e-56 194
Msa0414480 AT1G19630.1 27.451 459 318 10 7 459 8 457 2.40e-55 192
Msa0414480 AT4G36380.1 27.594 424 296 5 32 449 69 487 2.91e-55 193
Msa0414480 AT3G13730.2 30.137 438 270 11 23 443 42 460 7.38e-55 190
Msa0414480 AT3G50660.1 26.987 478 308 6 31 473 38 509 2.80e-54 190
Msa0414480 AT1G19630.3 27.716 451 311 10 7 451 8 449 6.60e-54 187
Msa0414480 AT2G29090.3 29.219 397 264 5 84 475 2 386 7.60e-54 186
Msa0414480 AT5G38970.1 28.661 478 314 12 7 475 5 464 8.05e-54 187
Msa0414480 AT5G05690.1 28.731 449 290 9 31 465 30 462 1.04e-53 187
Msa0414480 AT5G14400.2 27.840 449 280 11 37 475 1 415 3.75e-52 182
Msa0414480 AT2G42850.2 30.435 345 235 4 35 378 48 388 9.11e-52 180
Msa0414480 AT5G14400.3 28.537 417 255 10 37 443 1 384 3.59e-51 179
Msa0414480 AT3G30180.1 27.004 474 319 10 7 475 13 464 2.43e-49 176
Msa0414480 AT1G19630.2 28.000 425 293 10 7 425 8 425 8.10e-48 171
Msa0414480 AT3G50660.2 27.384 409 267 4 31 414 38 441 4.87e-46 166
Msa0414480 AT5G38970.3 29.238 407 263 10 6 403 4 394 9.17e-46 165
Msa0414480 AT5G05690.2 28.646 384 249 7 31 405 30 397 1.05e-45 164
Msa0414480 AT5G36140.1 33.333 303 189 6 16 313 17 311 4.54e-45 160
Msa0414480 AT1G73340.1 25.577 477 326 10 12 476 21 480 2.97e-42 157
Msa0414480 AT3G44970.1 27.740 447 310 7 32 473 35 473 1.09e-41 155
Msa0414480 AT5G14400.4 29.446 343 219 8 37 369 1 330 2.76e-41 150
Msa0414480 AT5G36130.1 46.099 141 73 2 337 476 1 139 2.85e-41 144
Msa0414480 AT1G55940.2 26.452 465 325 12 8 462 21 478 3.07e-41 154
Msa0414480 AT1G12740.3 27.353 340 239 4 32 369 31 364 1.36e-40 149
Msa0414480 AT1G55940.1 26.682 446 311 11 8 443 21 460 3.00e-40 151
Msa0414480 AT5G48000.2 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.4 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.7 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.6 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.5 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.3 26.754 456 303 12 32 473 35 473 9.91e-40 150
Msa0414480 AT5G48000.1 26.754 456 303 12 32 473 76 514 2.90e-39 149
Msa0414480 AT1G78490.1 27.500 440 296 13 32 461 35 461 2.22e-38 146
Msa0414480 AT5G38970.2 27.110 391 267 9 90 475 6 383 7.02e-38 142
Msa0414480 AT5G38970.4 27.110 391 267 9 90 475 6 383 7.02e-38 142
Msa0414480 AT1G65670.1 24.503 453 316 7 1 444 1 436 3.91e-37 142
Msa0414480 AT4G36380.2 26.531 343 242 4 32 369 69 406 4.83e-37 141
Msa0414480 AT4G15300.2 25.207 484 330 12 4 473 2 467 4.17e-35 137
Msa0414480 AT5G14400.1 26.142 394 247 11 92 475 2 361 4.94e-35 134
Msa0414480 AT4G15300.3 25.111 450 312 10 32 473 25 457 5.95e-35 136
Msa0414480 AT4G15393.2 24.018 433 311 11 32 460 35 453 2.96e-31 125
Msa0414480 AT4G15396.1 23.950 476 325 13 1 460 1 455 3.12e-30 123
Msa0414480 AT4G15396.3 23.696 460 316 11 1 444 1 441 1.54e-29 120
Msa0414480 AT1G78490.2 26.632 383 259 10 32 404 35 405 5.34e-29 118
Msa0414480 AT5G05690.3 26.611 357 232 9 123 465 3 343 5.76e-29 117
Msa0414480 AT4G15300.1 23.305 472 315 12 32 473 25 479 4.12e-26 111
Msa0414480 AT4G15396.2 23.319 476 307 14 1 460 1 434 8.56e-25 107
Msa0414480 AT2G29090.4 26.259 278 187 5 26 298 43 307 1.07e-23 102
Msa0414480 AT4G15310.1 22.395 451 325 14 32 473 36 470 9.33e-23 101
Msa0414480 AT5G04630.1 23.422 491 321 18 6 457 11 485 2.59e-22 100
Msa0414480 AT4G15393.1 22.546 377 277 8 32 405 35 399 6.97e-22 97.8
Msa0414480 AT4G15396.4 23.150 419 288 11 1 404 1 400 9.60e-22 97.4
Msa0414480 AT3G10560.1 23.760 484 318 15 7 454 18 486 2.15e-21 97.4
Msa0414480 AT2G34490.1 23.260 503 332 18 5 476 13 492 6.75e-21 95.9
Msa0414480 AT1G11680.1 22.436 468 322 13 7 453 14 461 1.61e-20 94.7
Msa0414480 AT2G28860.1 21.429 476 331 14 26 476 31 488 2.84e-20 94.0
Msa0414480 AT3G30290.1 22.705 414 287 10 72 473 5 397 1.70e-19 90.9
Msa0414480 AT2G28850.1 21.610 472 327 14 30 476 35 488 2.95e-19 90.9
Msa0414480 AT2G34500.1 23.614 487 327 16 16 476 20 487 3.03e-19 90.9
Msa0414480 AT2G26170.2 29.707 239 142 10 215 440 175 400 1.44e-17 85.5
Msa0414480 AT5G57220.1 24.074 486 314 20 8 461 4 466 1.63e-17 85.5
Msa0414480 AT1G31800.1 23.649 444 283 14 39 444 110 535 1.77e-17 85.9
Msa0414480 AT3G44970.2 25.625 320 230 4 32 348 35 349 1.91e-17 84.3
Msa0414480 AT2G26170.1 29.707 239 142 10 215 440 258 483 2.67e-17 85.1
Msa0414480 AT1G11600.1 23.353 501 310 17 25 472 28 507 4.04e-17 84.3
Msa0414480 AT3G10570.1 23.025 443 276 14 59 457 68 489 7.75e-16 80.5
Msa0414480 AT5G24950.1 24.896 482 307 20 2 448 1 462 2.60e-15 78.6
Msa0414480 AT3G53130.1 25.105 239 158 7 229 458 293 519 2.97e-15 78.6
Msa0414480 AT5G04660.1 23.843 432 287 13 59 457 66 488 3.80e-15 78.2
Msa0414480 AT4G37370.1 22.059 476 312 17 12 454 13 462 5.36e-15 77.8
Msa0414480 AT5G06905.1 22.938 497 311 20 12 457 11 486 6.34e-15 77.4
Msa0414480 AT2G23180.1 22.794 272 183 9 228 479 251 515 1.69e-14 76.3
Msa0414480 AT1G13140.1 26.639 244 160 8 211 437 243 484 2.38e-14 75.9
Msa0414480 AT5G47990.1 23.188 414 279 15 66 448 72 477 2.41e-14 75.9
Msa0414480 AT3G28740.1 22.222 405 268 13 77 451 81 468 2.64e-14 75.5
Msa0414480 AT3G26180.1 22.453 481 321 17 4 448 3 467 4.08e-14 75.1
Msa0414480 AT1G13140.2 29.469 207 129 7 246 437 254 458 5.17e-14 74.7
Msa0414480 AT1G33720.1 22.385 478 322 15 6 448 10 473 5.20e-14 74.7
Msa0414480 AT2G22330.1 22.746 488 322 17 13 457 36 511 5.33e-14 74.7
Msa0414480 AT2G22330.2 22.965 479 314 17 13 448 59 525 5.96e-14 74.7
Msa0414480 AT5G23190.1 23.552 259 176 9 236 476 286 540 1.22e-13 73.6
Msa0414480 AT3G20110.1 22.642 477 316 16 6 449 12 468 1.69e-13 73.2
Msa0414480 AT4G13770.1 24.078 461 299 16 1 427 1 444 1.86e-13 72.8
Msa0414480 AT2G45550.1 22.757 457 304 16 6 427 10 452 2.13e-13 72.8
Msa0414480 AT3G26280.1 23.241 469 309 19 16 449 18 470 2.57e-13 72.4
Msa0414480 AT2G45580.2 25.312 320 202 11 146 440 1 308 2.81e-13 71.6
Msa0414480 AT5G08250.1 21.751 354 247 10 108 431 77 430 3.22e-13 72.0
Msa0414480 AT3G26280.2 23.241 469 309 19 16 449 35 487 3.26e-13 72.0
Msa0414480 AT4G37360.1 24.272 206 146 4 253 456 268 465 3.85e-13 72.0
Msa0414480 AT5G58860.1 25.168 298 201 9 156 431 165 462 4.00e-13 72.0
Msa0414480 AT3G26170.1 22.062 485 318 18 4 448 3 467 4.05e-13 72.0
Msa0414480 AT5G08250.2 21.751 354 247 10 108 431 139 492 4.15e-13 72.0
Msa0414480 AT1G64930.1 23.319 476 308 20 24 456 24 485 4.97e-13 71.6
Msa0414480 AT4G39480.1 22.302 278 189 10 221 477 243 514 9.24e-13 70.9
Msa0414480 AT1G16400.1 21.212 495 322 18 6 448 17 495 1.38e-12 70.1
Msa0414480 AT1G13150.1 24.476 286 192 8 211 476 236 517 1.53e-12 70.1
Msa0414480 AT1G64940.1 24.056 503 316 21 2 456 1 485 1.64e-12 70.1
Msa0414480 AT4G37340.1 23.052 308 219 8 155 456 170 465 2.07e-12 69.7
Msa0414480 AT4G15110.1 25.000 220 118 8 255 439 332 539 2.14e-12 69.7
Msa0414480 AT3G48280.1 24.138 493 293 21 7 456 6 460 2.29e-12 69.3
Msa0414480 AT5G63450.1 22.201 518 336 21 4 476 7 502 4.35e-12 68.6
Msa0414480 AT5G63450.2 22.201 518 336 21 4 476 65 560 4.56e-12 68.6
Msa0414480 AT5G35715.1 21.814 408 274 13 80 452 9 406 5.38e-12 68.2
Msa0414480 AT4G12300.1 22.175 469 321 16 12 448 21 477 5.59e-12 68.2
Msa0414480 AT1G13110.1 23.077 481 317 17 7 448 3 469 5.71e-12 68.2
Msa0414480 AT5G10610.1 20.868 484 344 11 1 459 1 470 9.69e-12 67.4
Msa0414480 AT4G39500.2 22.305 269 179 11 228 477 260 517 1.01e-11 67.4
Msa0414480 AT4G39500.1 22.305 269 179 11 228 477 210 467 1.12e-11 67.4
Msa0414480 AT3G20960.2 23.131 428 282 14 66 456 71 488 1.17e-11 67.4
Msa0414480 AT4G15360.1 22.360 483 333 16 6 456 14 486 1.78e-11 66.6
Msa0414480 AT1G16410.1 20.833 504 321 17 5 448 11 496 2.25e-11 66.6
Msa0414480 AT4G32170.1 22.388 268 180 12 228 478 249 505 2.56e-11 66.2
Msa0414480 AT1G47620.1 24.364 275 180 12 224 478 251 517 4.01e-11 65.5
Msa0414480 AT1G13100.1 28.090 178 122 3 282 456 297 471 4.56e-11 65.5
Msa0414480 AT4G13290.1 25.690 471 273 24 21 448 20 456 5.16e-11 65.1
Msa0414480 AT4G39490.1 22.074 299 186 12 219 477 226 517 5.35e-11 65.1

Find 105 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTCTTGTTTAGGTATAT+TGG 0.193849 3_2:-60017964 Msa0414480:intron
TCCCCTACAGTGTTTATTAT+TGG 0.217404 3_2:-60022170 Msa0414480:CDS
CTCCCTTGTTTGGTGGATTT+AGG 0.221627 3_2:-60018127 Msa0414480:CDS
ATTTCCCTGGCACCTCATTT+TGG 0.224462 3_2:-60018836 Msa0414480:CDS
TCTTTGGGGTATCCTATTAT+TGG 0.246365 3_2:-60022299 Msa0414480:CDS
CAATTCTTGCCCTAGCCTTT+TGG 0.252995 3_2:+60018808 None:intergenic
AAATGTTCCAAAAGGGTCTT+TGG 0.266253 3_2:-60022315 Msa0414480:CDS
TCTCTCATCTAATTTCTAAA+TGG 0.268085 3_2:-60022423 Msa0414480:exon
CAAACCCTAGCTGAACTTAT+AGG 0.271100 3_2:-60022059 Msa0414480:CDS
CTCTTATGACCTTGATGATA+TGG 0.274959 3_2:-60018599 Msa0414480:CDS
CTTCCTTAGGTCTACAAGTT+AGG 0.275168 3_2:-60017688 Msa0414480:CDS
CAAGGATATGACATCCAAAA+AGG 0.281190 3_2:-60018080 Msa0414480:CDS
CAAGGAAACAAGTTTATTCT+TGG 0.285786 3_2:-60022143 Msa0414480:CDS
GTTTCTTGTTTAGGTATATT+GGG 0.287130 3_2:-60017963 Msa0414480:intron
TCAAGTGTTTCTCCAATAAT+AGG 0.290870 3_2:+60022287 None:intergenic
TTCTTGTCTTCTTGCCATAA+GGG 0.303216 3_2:-60018706 Msa0414480:CDS
GAAGAAACTGTCCTATTATA+TGG 0.306669 3_2:-60018955 Msa0414480:CDS
TTGATCTATACAATTTATAC+TGG 0.310575 3_2:+60017549 None:intergenic
CCCTTTACTTACCTTCCATT+TGG 0.318147 3_2:-60017848 Msa0414480:CDS
CGAGATGGTTCAAACTTGTA+TGG 0.363230 3_2:+60017899 None:intergenic
GGATACCCCAAAGACCCTTT+TGG 0.372327 3_2:+60022308 None:intergenic
TTTCTTGTCTTCTTGCCATA+AGG 0.376527 3_2:-60018707 Msa0414480:CDS
TTAGTTTGCTTTAATGTACT+TGG 0.387012 3_2:+60017607 None:intergenic
TACATTGGAAGCCATATAAT+AGG 0.391018 3_2:+60018944 None:intergenic
AATGTTCCAAAAGGGTCTTT+GGG 0.394589 3_2:-60022314 Msa0414480:CDS
CTTCCTTTATGTAGAACAAA+TGG 0.398316 3_2:-60018255 Msa0414480:intron
AGGATGATCCCTCCCTTGTT+TGG 0.399326 3_2:-60018137 Msa0414480:CDS
ACTTACCTTCCATTTGGTGC+AGG 0.402034 3_2:-60017842 Msa0414480:CDS
AGTTAACAGAATATTACTTA+AGG 0.412817 3_2:-60019018 Msa0414480:CDS
TGTAGACCTAAGGAAGGATA+TGG 0.415745 3_2:+60017695 None:intergenic
GAAGAAAGGGTATCTAAATA+TGG 0.423206 3_2:-60022221 Msa0414480:CDS
TAAGAAGATATATTACATCT+TGG 0.430086 3_2:+60017659 None:intergenic
TTCCTATTATGAACAAAAGA+AGG 0.431903 3_2:-60018773 Msa0414480:CDS
ATGATCCCTCCCTTGTTTGG+TGG 0.435807 3_2:-60018134 Msa0414480:CDS
GCATAGGAAATGAGTTTGCC+AGG 0.442163 3_2:-60017808 Msa0414480:CDS
AGGTAAGTAAAGGGTGGGAT+TGG 0.449267 3_2:+60017857 None:intergenic
CCTACCATTCAAAAGATACT+TGG 0.452384 3_2:-60022086 Msa0414480:CDS
TGACGAGTAATAGTTTCCTC+TGG 0.457822 3_2:+60017725 None:intergenic
AGTAAAGGGTGGGATTGGCT+TGG 0.462672 3_2:+60017862 None:intergenic
TTATGAAGCCCTGCACCAAA+TGG 0.466953 3_2:+60017833 None:intergenic
CCTATGCCATATCCTTCCTT+AGG 0.469443 3_2:-60017701 Msa0414480:CDS
GTCCAATAATAAACACTGTA+GGG 0.471515 3_2:+60022168 None:intergenic
TAAAGCACAAAGGCAAGATA+AGG 0.473516 3_2:-60022258 Msa0414480:CDS
CTTACCTTCCATTTGGTGCA+GGG 0.476598 3_2:-60017841 Msa0414480:CDS
AGAAGGGAGGATTTGTCAAA+AGG 0.477197 3_2:-60018756 Msa0414480:CDS
TTTGGAGAGGCCAAAAGGCT+AGG 0.490275 3_2:-60018818 Msa0414480:CDS
GAGGTGCCAGGGAAATTGAT+TGG 0.495782 3_2:+60018843 None:intergenic
CCTCTCCAAAATGAGGTGCC+AGG 0.496307 3_2:+60018831 None:intergenic
AAAGGAAAGGAAATGAAGAA+AGG 0.502314 3_2:-60018220 Msa0414480:CDS
AAAGCACAAAGGCAAGATAA+GGG 0.503390 3_2:-60022257 Msa0414480:CDS
TTGATCCTATAAGTTCAGCT+AGG 0.507385 3_2:+60022054 None:intergenic
AATCCTAACTTGTAGACCTA+AGG 0.510863 3_2:+60017685 None:intergenic
GCTCTGAGTGGATAGAAGAA+AGG 0.519240 3_2:-60022235 Msa0414480:CDS
TTGGAGAGGCCAAAAGGCTA+GGG 0.519737 3_2:-60018817 Msa0414480:CDS
CTCTGAGTGGATAGAAGAAA+GGG 0.520937 3_2:-60022234 Msa0414480:CDS
TTTCCTAAATCCACCAAACA+AGG 0.523989 3_2:+60018124 None:intergenic
CATCTTCACAAAATTGTGAA+TGG 0.527167 3_2:+60017769 None:intergenic
ACCAAATGGAAGGTAAGTAA+AGG 0.529962 3_2:+60017847 None:intergenic
GAAATGAAGAAAGGCTAACA+TGG 0.532003 3_2:-60018211 Msa0414480:CDS
TGTACTTGGATAAATAATAC+AGG 0.532307 3_2:+60017621 None:intergenic
TAGCTGAACTTATAGGATCA+AGG 0.533992 3_2:-60022052 Msa0414480:intron
TCTCTTCCAATCAATTTCCC+TGG 0.538523 3_2:-60018849 Msa0414480:CDS
TGTCCAATAATAAACACTGT+AGG 0.541231 3_2:+60022167 None:intergenic
GTGCAGGCACAGGTTAGTGA+AGG 0.541453 3_2:-60019105 Msa0414480:intron
CCAAATGGAAGGTAAGTAAA+GGG 0.546848 3_2:+60017848 None:intergenic
ATCTATGTCAAACAATACAT+TGG 0.547338 3_2:+60018929 None:intergenic
CTCTCCAAAATGAGGTGCCA+GGG 0.550512 3_2:+60018832 None:intergenic
TGATCCTATAAGTTCAGCTA+GGG 0.551541 3_2:+60022055 None:intergenic
AGTGCACATAATACAATGAA+AGG 0.555641 3_2:+60022392 None:intergenic
CACTGTAGGGGAACCCAGCA+AGG 0.556256 3_2:+60022181 None:intergenic
TAGGTATATTGGGCATCAAG+TGG 0.569167 3_2:-60017953 Msa0414480:CDS
CAGGCACAGGTTAGTGAAGG+GGG 0.578610 3_2:-60019102 Msa0414480:CDS
ATAAAACAATTGAAGTTGTG+AGG 0.580685 3_2:-60018983 Msa0414480:CDS
GAAGTTGTCTAGAGATCAAG+AGG 0.582468 3_2:-60018577 Msa0414480:CDS
TCCTATTATGAACAAAAGAA+GGG 0.587101 3_2:-60018772 Msa0414480:CDS
CTAACTTGTAGACCTAAGGA+AGG 0.588301 3_2:+60017689 None:intergenic
CCTAAGGAAGGATATGGCAT+AGG 0.589890 3_2:+60017701 None:intergenic
AGACAACTTCCATATCATCA+AGG 0.594289 3_2:+60018590 None:intergenic
GCAGGGCTTCATAATTGCAT+AGG 0.597715 3_2:-60017824 Msa0414480:CDS
GAAGCCCTGCACCAAATGGA+AGG 0.601532 3_2:+60017837 None:intergenic
TAAATCCACCAAACAAGGGA+GGG 0.610091 3_2:+60018129 None:intergenic
CATAGGAAATGAGTTTGCCA+GGG 0.611766 3_2:-60017807 Msa0414480:CDS
TGCAGGCACAGGTTAGTGAA+GGG 0.612093 3_2:-60019104 Msa0414480:intron
CTTAAAGATACTAGCTACCA+AGG 0.614804 3_2:-60018098 Msa0414480:CDS
ATGTTCCAAAAGGGTCTTTG+GGG 0.618224 3_2:-60022313 Msa0414480:CDS
TCCAATAATAAACACTGTAG+GGG 0.619302 3_2:+60022169 None:intergenic
GCAGGCACAGGTTAGTGAAG+GGG 0.621107 3_2:-60019103 Msa0414480:intron
AAATGAAGAAAGGCTAACAT+GGG 0.624787 3_2:-60018210 Msa0414480:CDS
GTAATTATGTCATCAGCTAG+AGG 0.627210 3_2:+60018669 None:intergenic
GTGTTTATTATTGGACAACA+AGG 0.637606 3_2:-60022161 Msa0414480:CDS
ATGGAAGGTAAGTAAAGGGT+GGG 0.637679 3_2:+60017852 None:intergenic
TATTATGAACAAAAGAAGGG+AGG 0.641657 3_2:-60018769 Msa0414480:CDS
AGCAGACAAAACATCATCTG+AGG 0.643135 3_2:+60022118 None:intergenic
GGTAGTTAATGTCTCAACCC+TGG 0.644929 3_2:+60017790 None:intergenic
AATGGAAGGTAAGTAAAGGG+TGG 0.648522 3_2:+60017851 None:intergenic
TACAAAAGATGAAATACACA+TGG 0.649342 3_2:-60018181 Msa0414480:CDS
TTCCTAAATCCACCAAACAA+GGG 0.651412 3_2:+60018125 None:intergenic
CTAAATCCACCAAACAAGGG+AGG 0.656656 3_2:+60018128 None:intergenic
TTGACATAGATGATCACACA+AGG 0.668771 3_2:-60018917 Msa0414480:CDS
ATGGTCTCAATTGAATCCAG+AGG 0.672228 3_2:-60017741 Msa0414480:CDS
GGCAAGATAAGGGCTCTGAG+TGG 0.693628 3_2:-60022247 Msa0414480:CDS
GAGTTGCTCAAGAATTGATG+AGG 0.701801 3_2:-60018157 Msa0414480:CDS
AATGAAGAAAGGCTAACATG+GGG 0.726923 3_2:-60018209 Msa0414480:CDS
TGTAGGGGAACCCAGCAAGG+AGG 0.735918 3_2:+60022184 None:intergenic
TGACATAGATGATCACACAA+GGG 0.752127 3_2:-60018916 Msa0414480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATGAATAAATAATGTAT+CGG - chr3_2:60018153-60018172 Msa0414480:CDS 10.0%
!! TATTAAAAAACTATAACAAA+CGG + chr3_2:60021511-60021530 None:intergenic 10.0%
!! ATAATACAAAATTAAAACTA+TGG + chr3_2:60021885-60021904 None:intergenic 10.0%
!!! AAGAGAAATCATATTTTTAA+GGG - chr3_2:60017969-60017988 Msa0414480:intron 15.0%
!!! TAAGAAAAGATTCTTTTTTA+AGG - chr3_2:60018125-60018144 Msa0414480:CDS 15.0%
!!! TAAATTAGTCTGTTAAAAAT+AGG + chr3_2:60018352-60018371 None:intergenic 15.0%
!!! TAAAAAATTATTTTGACAAG+AGG + chr3_2:60020576-60020595 None:intergenic 15.0%
!!! CTTTATATTATGCAAAATTT+TGG + chr3_2:60020640-60020659 None:intergenic 15.0%
!!! CAAAATTTTGCATAATATAA+AGG - chr3_2:60020638-60020657 Msa0414480:intron 15.0%
!! AAAAAAAATACTAATGGAAA+TGG - chr3_2:60021612-60021631 Msa0414480:intron 15.0%
!!! TTTTTGAGAGAATTTTTTTG+AGG + chr3_2:60017575-60017594 None:intergenic 20.0%
!! AAACAAAAAATGTTCCAAAA+GGG - chr3_2:60017598-60017617 Msa0414480:three_prime_UTR 20.0%
!!! GAAGAGAAATCATATTTTTA+AGG - chr3_2:60017968-60017987 Msa0414480:intron 20.0%
!!! TAAGAAAAGATTCATTTTTC+AGG + chr3_2:60018233-60018252 None:intergenic 20.0%
!! AGAAACAATTGTATAAAAGA+TGG + chr3_2:60018602-60018621 None:intergenic 20.0%
!!! TCTTTTATACAATTGTTTCT+TGG - chr3_2:60018602-60018621 Msa0414480:CDS 20.0%
!! ATTGTATTTCAAACTCAAAT+TGG - chr3_2:60020053-60020072 Msa0414480:intron 20.0%
!! AGAAACAATTGTATAAAAGA+TGG + chr3_2:60018602-60018621 None:intergenic 20.0%
!!! TCTTTTATACAATTGTTTCT+TGG - chr3_2:60018602-60018621 Msa0414480:CDS 20.0%
!! TTGAATCAAGATTATAATCA+AGG + chr3_2:60020701-60020720 None:intergenic 20.0%
!! TATAATCTTGATTCAAACAA+TGG - chr3_2:60020705-60020724 Msa0414480:intron 20.0%
!!! ATGAGTCTTATGTTTATTTT+TGG - chr3_2:60020793-60020812 Msa0414480:intron 20.0%
!! AGTTAACAGAATATTACTTA+AGG - chr3_2:60020902-60020921 Msa0414480:intron 20.0%
!!! GTTTACAATAAAGTTTTAGA+AGG - chr3_2:60021365-60021384 Msa0414480:intron 20.0%
!!! AGAACAAATGGAAATTTTAA+AGG - chr3_2:60021677-60021696 Msa0414480:intron 20.0%
!!! AAATGGAAATTTTAAAGGAA+AGG - chr3_2:60021682-60021701 Msa0414480:intron 20.0%
!!! ATCAGTGACATATATATTTT+TGG - chr3_2:60021913-60021932 Msa0414480:intron 20.0%
!!! TCAGTGACATATATATTTTT+GGG - chr3_2:60021914-60021933 Msa0414480:intron 20.0%
!! TAAGAAGATATATTACATCT+TGG + chr3_2:60022264-60022283 None:intergenic 20.0%
!! TTGATCTATACAATTTATAC+TGG + chr3_2:60022374-60022393 None:intergenic 20.0%
! CAAACAAAAAATGTTCCAAA+AGG - chr3_2:60017597-60017616 Msa0414480:three_prime_UTR 25.0%
!! TTGATTTTCTTAAAGCACAA+AGG - chr3_2:60017652-60017671 Msa0414480:exon 25.0%
!!! GAGAATTTTCAAGTGTTTTT+TGG - chr3_2:60018067-60018086 Msa0414480:intron 25.0%
!! TCAAGTGTTTTCTTTTGTAT+TGG - chr3_2:60018278-60018297 Msa0414480:intron 25.0%
!!! TGTTTTCTTTTGTATTGGTT+AGG - chr3_2:60018283-60018302 Msa0414480:intron 25.0%
! AATAAACTAGAGTTACTTAG+TGG - chr3_2:60018499-60018518 Msa0414480:intron 25.0%
! ACTATAGTAGAAAGTTAGTT+AGG - chr3_2:60018524-60018543 Msa0414480:intron 25.0%
! CTATAGTAGAAAGTTAGTTA+GGG - chr3_2:60018525-60018544 Msa0414480:intron 25.0%
! AATAAACTAGAGTTACTTAG+TGG - chr3_2:60018499-60018518 Msa0414480:intron 25.0%
! ACTATAGTAGAAAGTTAGTT+AGG - chr3_2:60018524-60018543 Msa0414480:intron 25.0%
! CTATAGTAGAAAGTTAGTTA+GGG - chr3_2:60018525-60018544 Msa0414480:intron 25.0%
! CAAATATACATGATATTCAC+CGG + chr3_2:60020415-60020434 None:intergenic 25.0%
! ATTAACCATTCACTTTAACA+CGG + chr3_2:60020463-60020482 None:intergenic 25.0%
!!! TCTTTTTCACATAGTTTTGA+AGG + chr3_2:60020872-60020891 None:intergenic 25.0%
! TCAAAACTATGTGAAAAAGA+TGG - chr3_2:60020872-60020891 Msa0414480:intron 25.0%
! ATAAAACAATTGAAGTTGTG+AGG - chr3_2:60020937-60020956 Msa0414480:intron 25.0%
! ATCTATGTCAAACAATACAT+TGG + chr3_2:60020994-60021013 None:intergenic 25.0%
! TTCCTATTATGAACAAAAGA+AGG - chr3_2:60021147-60021166 Msa0414480:intron 25.0%
! TCCTATTATGAACAAAAGAA+GGG - chr3_2:60021148-60021167 Msa0414480:intron 25.0%
! TCCATAATCCAGAATAAAAA+TGG - chr3_2:60021429-60021448 Msa0414480:intron 25.0%
!!! AAACAAAGCCATTTTTATTC+TGG + chr3_2:60021440-60021459 None:intergenic 25.0%
! AAAAAACTATAACAAACGGA+TGG + chr3_2:60021507-60021526 None:intergenic 25.0%
! TTTCCATTTGTTCTACATAA+AGG + chr3_2:60021671-60021690 None:intergenic 25.0%
!!! GAAATTTTAAAGGAAAGGAA+AGG - chr3_2:60021687-60021706 Msa0414480:intron 25.0%
! TACAAAAGATGAAATACACA+TGG - chr3_2:60021739-60021758 Msa0414480:intron 25.0%
!! GTTTCTTGTTTAGGTATATT+GGG - chr3_2:60021957-60021976 Msa0414480:intron 25.0%
! TGTACTTGGATAAATAATAC+AGG + chr3_2:60022302-60022321 None:intergenic 25.0%
!!! TTAGTTTGCTTTAATGTACT+TGG + chr3_2:60022316-60022335 None:intergenic 25.0%
AGTGCACATAATACAATGAA+AGG + chr3_2:60017531-60017550 None:intergenic 30.0%
TCAAGTGTTTCTCCAATAAT+AGG + chr3_2:60017636-60017655 None:intergenic 30.0%
!! GAAGAAAGGGTATCTAAATA+TGG - chr3_2:60017699-60017718 Msa0414480:CDS 30.0%
TCCAATAATAAACACTGTAG+GGG + chr3_2:60017754-60017773 None:intergenic 30.0%
GTCCAATAATAAACACTGTA+GGG + chr3_2:60017755-60017774 None:intergenic 30.0%
TGTCCAATAATAAACACTGT+AGG + chr3_2:60017756-60017775 None:intergenic 30.0%
GTGTTTATTATTGGACAACA+AGG - chr3_2:60017759-60017778 Msa0414480:CDS 30.0%
CAAGGAAACAAGTTTATTCT+TGG - chr3_2:60017777-60017796 Msa0414480:CDS 30.0%
! AAGTATCTTTTGAATGGTAG+GGG + chr3_2:60017835-60017854 None:intergenic 30.0%
! CAAGTATCTTTTGAATGGTA+GGG + chr3_2:60017836-60017855 None:intergenic 30.0%
! CTTTCCAAGTATCTTTTGAA+TGG + chr3_2:60017841-60017860 None:intergenic 30.0%
! TGAAAAGTCCTTTGAAAAAC+CGG + chr3_2:60018030-60018049 None:intergenic 30.0%
! GATTAGTTGATATACTCACT+CGG - chr3_2:60018093-60018112 Msa0414480:CDS 30.0%
! ATAAATGATGCATTTGAGAC+CGG + chr3_2:60018202-60018221 None:intergenic 30.0%
GTAGCTTATTTATAGTGACT+TGG + chr3_2:60018562-60018581 None:intergenic 30.0%
AAGATGGTGAAATAGTACAT+AGG + chr3_2:60018586-60018605 None:intergenic 30.0%
TAGATTGTGTAATTCTCTCT+AGG + chr3_2:60018636-60018655 None:intergenic 30.0%
TTATGAATTAGAGGATTCCA+TGG + chr3_2:60018684-60018703 None:intergenic 30.0%
GAATCCTCTAATTCATAACA+TGG - chr3_2:60018686-60018705 Msa0414480:CDS 30.0%
GATACCATGTTATGAATTAG+AGG + chr3_2:60018693-60018712 None:intergenic 30.0%
! AATCAAGAATACGAGTTTTC+TGG + chr3_2:60019001-60019020 None:intergenic 30.0%
ATGTGTCGAATTCTTTGATT+TGG + chr3_2:60019042-60019061 None:intergenic 30.0%
AGGATAATCTGAACTGAAAA+CGG + chr3_2:60019396-60019415 None:intergenic 30.0%
! GTTCAGATTATCCTTTCTTT+TGG - chr3_2:60019402-60019421 Msa0414480:intron 30.0%
TAGATAAGTGATTCTGATCA+TGG - chr3_2:60019729-60019748 Msa0414480:intron 30.0%
AGCAAATGGCAAAAAATGAT+AGG + chr3_2:60019976-60019995 None:intergenic 30.0%
TGAAGTAACGAAGTAAAATG+GGG + chr3_2:60020010-60020029 None:intergenic 30.0%
CTGAAGTAACGAAGTAAAAT+GGG + chr3_2:60020011-60020030 None:intergenic 30.0%
ACTGAAGTAACGAAGTAAAA+TGG + chr3_2:60020012-60020031 None:intergenic 30.0%
GTAGCTTATTTATAGTGACT+TGG + chr3_2:60018562-60018581 None:intergenic 30.0%
AAGATGGTGAAATAGTACAT+AGG + chr3_2:60018586-60018605 None:intergenic 30.0%
TAGATTGTGTAATTCTCTCT+AGG + chr3_2:60018636-60018655 None:intergenic 30.0%
TTATGAATTAGAGGATTCCA+TGG + chr3_2:60018684-60018703 None:intergenic 30.0%
GAGTAAGTGTTATGAATTAG+AGG + chr3_2:60020318-60020337 None:intergenic 30.0%
! TTTGAAACTCAAATTGTTGC+CGG - chr3_2:60020393-60020412 Msa0414480:intron 30.0%
GTTATCACAATTCAAATTCG+TGG + chr3_2:60020517-60020536 None:intergenic 30.0%
AAATTTGACATCAGCTTAGA+TGG + chr3_2:60020539-60020558 None:intergenic 30.0%
!!! CTTATGTTTATTTTTGGTGC+AGG - chr3_2:60020799-60020818 Msa0414480:intron 30.0%
GAAGAAACTGTCCTATTATA+TGG - chr3_2:60020965-60020984 Msa0414480:intron 30.0%
TACATTGGAAGCCATATAAT+AGG + chr3_2:60020979-60020998 None:intergenic 30.0%
! TCCCTTCTTTTGTTCATAAT+AGG + chr3_2:60021152-60021171 None:intergenic 30.0%
TATTATGAACAAAAGAAGGG+AGG - chr3_2:60021151-60021170 Msa0414480:intron 30.0%
!! TTGATGATTTTCATCCCTTA+TGG + chr3_2:60021231-60021250 None:intergenic 30.0%
!!! GCCATTTTTATTCTGGATTA+TGG + chr3_2:60021433-60021452 None:intergenic 30.0%
AAACTTCAAAGAGAGACTAA+GGG + chr3_2:60021639-60021658 None:intergenic 30.0%
AAAACTTCAAAGAGAGACTA+AGG + chr3_2:60021640-60021659 None:intergenic 30.0%
CTTCCTTTATGTAGAACAAA+TGG - chr3_2:60021665-60021684 Msa0414480:intron 30.0%
AAAGGAAAGGAAATGAAGAA+AGG - chr3_2:60021700-60021719 Msa0414480:intron 30.0%
AAATGAAGAAAGGCTAACAT+GGG - chr3_2:60021710-60021729 Msa0414480:intron 30.0%
AAGGATATGACATCCAAAAA+GGG - chr3_2:60021841-60021860 Msa0414480:intron 30.0%
GGCTAACAATAATGTCAAAT+TGG - chr3_2:60021935-60021954 Msa0414480:intron 30.0%
! GTCAAATTGGTTTCTTGTTT+AGG - chr3_2:60021948-60021967 Msa0414480:intron 30.0%
! GGTTTCTTGTTTAGGTATAT+TGG - chr3_2:60021956-60021975 Msa0414480:intron 30.0%
!! GTTTGATTTTCAAAACGAGA+TGG + chr3_2:60022039-60022058 None:intergenic 30.0%
CATCTTCACAAAATTGTGAA+TGG + chr3_2:60022154-60022173 None:intergenic 30.0%
! ATTTTGTGAAGATGTGTGAA+TGG - chr3_2:60022160-60022179 Msa0414480:CDS 30.0%
AAATGTTCCAAAAGGGTCTT+TGG - chr3_2:60017605-60017624 Msa0414480:three_prime_UTR 35.0%
AATGTTCCAAAAGGGTCTTT+GGG - chr3_2:60017606-60017625 Msa0414480:three_prime_UTR 35.0%
!! TCTTTGGGGTATCCTATTAT+TGG - chr3_2:60017621-60017640 Msa0414480:three_prime_UTR 35.0%
TAAAGCACAAAGGCAAGATA+AGG - chr3_2:60017662-60017681 Msa0414480:CDS 35.0%
AAAGCACAAAGGCAAGATAA+GGG - chr3_2:60017663-60017682 Msa0414480:CDS 35.0%
TCCCCTACAGTGTTTATTAT+TGG - chr3_2:60017750-60017769 Msa0414480:CDS 35.0%
! AGTATCTTTTGAATGGTAGG+GGG + chr3_2:60017834-60017853 None:intergenic 35.0%
! CCAAGTATCTTTTGAATGGT+AGG + chr3_2:60017837-60017856 None:intergenic 35.0%
CCTACCATTCAAAAGATACT+TGG - chr3_2:60017834-60017853 Msa0414480:CDS 35.0%
TGATCCTATAAGTTCAGCTA+GGG + chr3_2:60017868-60017887 None:intergenic 35.0%
TTGATCCTATAAGTTCAGCT+AGG + chr3_2:60017869-60017888 None:intergenic 35.0%
TAGCTGAACTTATAGGATCA+AGG - chr3_2:60017868-60017887 Msa0414480:CDS 35.0%
TTAAGGGAAATGCTTCTCTA+TGG - chr3_2:60017985-60018004 Msa0414480:intron 35.0%
! ATTAGTTGATATACTCCCTC+CGG - chr3_2:60018180-60018199 Msa0414480:CDS 35.0%
TTTCTTATATTCGAGACCGA+AGG - chr3_2:60018246-60018265 Msa0414480:intron 35.0%
TTCTTATATTCGAGACCGAA+GGG - chr3_2:60018247-60018266 Msa0414480:intron 35.0%
TCTTCTTCTTCATCAGAAAC+TGG + chr3_2:60018744-60018763 None:intergenic 35.0%
GATGAAGAAGAAGATTCCAA+TGG - chr3_2:60018750-60018769 Msa0414480:CDS 35.0%
ATCTTCTTCTTCATCACCAT+TGG + chr3_2:60018769-60018788 None:intergenic 35.0%
! CAGAGCATGAGAAATTTTTG+TGG + chr3_2:60019124-60019143 None:intergenic 35.0%
CACAAAAATTTCTCATGCTC+TGG - chr3_2:60019122-60019141 Msa0414480:intron 35.0%
!! ACTTCTGGAATCCAAAAGAA+AGG + chr3_2:60019416-60019435 None:intergenic 35.0%
! CTTTTGGATTCCAGAAGTTA+TGG - chr3_2:60019418-60019437 Msa0414480:intron 35.0%
ATAACTTCTGCAGTGTGATT+CGG + chr3_2:60019646-60019665 None:intergenic 35.0%
!! GAAAGAAAAGCTGTTTTCGA+TGG - chr3_2:60019667-60019686 Msa0414480:intron 35.0%
ACGTGAATCTTGTTGCAAAA+GGG + chr3_2:60019840-60019859 None:intergenic 35.0%
AACGTGAATCTTGTTGCAAA+AGG + chr3_2:60019841-60019860 None:intergenic 35.0%
! ATTCCACATTTTCACGTCTT+TGG - chr3_2:60019873-60019892 Msa0414480:intron 35.0%
ATCTCCACTTCTTTCAAGAT+TGG - chr3_2:60019898-60019917 Msa0414480:intron 35.0%
!! ACTTCTTTCAAGATTGGTCT+GGG - chr3_2:60019904-60019923 Msa0414480:intron 35.0%
GGCTTCATCAGAATTTCATT+GGG - chr3_2:60019925-60019944 Msa0414480:intron 35.0%
AAGTAACGAAGTAAAATGGG+GGG + chr3_2:60020008-60020027 None:intergenic 35.0%
GAAGTAACGAAGTAAAATGG+GGG + chr3_2:60020009-60020028 None:intergenic 35.0%
TAGTAACGTTCGATATTGTC+TGG + chr3_2:60020352-60020371 None:intergenic 35.0%
CAAAACCGTGTTAAAGTGAA+TGG - chr3_2:60020455-60020474 Msa0414480:intron 35.0%
!!! ACATAGTTTTGAAGGCATTC+AGG + chr3_2:60020864-60020883 None:intergenic 35.0%
TTGACATAGATGATCACACA+AGG - chr3_2:60021003-60021022 Msa0414480:intron 35.0%
TGACATAGATGATCACACAA+GGG - chr3_2:60021004-60021023 Msa0414480:intron 35.0%
TTTCTTGTCTTCTTGCCATA+AGG - chr3_2:60021213-60021232 Msa0414480:intron 35.0%
TTCTTGTCTTCTTGCCATAA+GGG - chr3_2:60021214-60021233 Msa0414480:intron 35.0%
GTAATTATGTCATCAGCTAG+AGG + chr3_2:60021254-60021273 None:intergenic 35.0%
! CTCTTATGACCTTGATGATA+TGG - chr3_2:60021321-60021340 Msa0414480:intron 35.0%
AGACAACTTCCATATCATCA+AGG + chr3_2:60021333-60021352 None:intergenic 35.0%
GAAATGAAGAAAGGCTAACA+TGG - chr3_2:60021709-60021728 Msa0414480:intron 35.0%
AATGAAGAAAGGCTAACATG+GGG - chr3_2:60021711-60021730 Msa0414480:intron 35.0%
TTCCTAAATCCACCAAACAA+GGG + chr3_2:60021798-60021817 None:intergenic 35.0%
TTTCCTAAATCCACCAAACA+AGG + chr3_2:60021799-60021818 None:intergenic 35.0%
CTTAAAGATACTAGCTACCA+AGG - chr3_2:60021822-60021841 Msa0414480:intron 35.0%
! CTTTTTGGATGTCATATCCT+TGG + chr3_2:60021842-60021861 None:intergenic 35.0%
CAAGGATATGACATCCAAAA+AGG - chr3_2:60021840-60021859 Msa0414480:intron 35.0%
CCAAATGGAAGGTAAGTAAA+GGG + chr3_2:60022075-60022094 None:intergenic 35.0%
ACCAAATGGAAGGTAAGTAA+AGG + chr3_2:60022076-60022095 None:intergenic 35.0%
! AATCCTAACTTGTAGACCTA+AGG + chr3_2:60022238-60022257 None:intergenic 35.0%
ATGTTCCAAAAGGGTCTTTG+GGG - chr3_2:60017607-60017626 Msa0414480:three_prime_UTR 40.0%
CTCTGAGTGGATAGAAGAAA+GGG - chr3_2:60017686-60017705 Msa0414480:CDS 40.0%
!!! AGCAAGGAGGTTTTGAAAAC+AGG + chr3_2:60017726-60017745 None:intergenic 40.0%
! TGTTTTCAAAACCTCCTTGC+TGG - chr3_2:60017725-60017744 Msa0414480:CDS 40.0%
! GTTTTCAAAACCTCCTTGCT+GGG - chr3_2:60017726-60017745 Msa0414480:CDS 40.0%
AGCAGACAAAACATCATCTG+AGG + chr3_2:60017805-60017824 None:intergenic 40.0%
CAAACCCTAGCTGAACTTAT+AGG - chr3_2:60017861-60017880 Msa0414480:CDS 40.0%
! CACTTGATAACCAATCCCTT+CGG + chr3_2:60018265-60018284 None:intergenic 40.0%
!! TGGTTCTAGGTCAAATGCAA+TGG + chr3_2:60018664-60018683 None:intergenic 40.0%
TTGCATTTGACCTAGAACCA+TGG - chr3_2:60018664-60018683 Msa0414480:CDS 40.0%
TTAGAGGATTCCATGGTTCT+AGG + chr3_2:60018677-60018696 None:intergenic 40.0%
!! CAAGTTGTTTTCGGTAGCTT+TGG - chr3_2:60018831-60018850 Msa0414480:CDS 40.0%
TGAAGAAACAGGAGTGGAAA+CGG + chr3_2:60018862-60018881 None:intergenic 40.0%
ATGGTGAATCCATCAGTTTC+TGG + chr3_2:60018897-60018916 None:intergenic 40.0%
CTTGAATCAACCAGAGAACA+GGG + chr3_2:60018936-60018955 None:intergenic 40.0%
ACTTGAATCAACCAGAGAAC+AGG + chr3_2:60018937-60018956 None:intergenic 40.0%
CAATTCTGCCATTGATGCTT+CGG - chr3_2:60018968-60018987 Msa0414480:CDS 40.0%
!! GTTTTCTTCCGAAGCATCAA+TGG + chr3_2:60018979-60018998 None:intergenic 40.0%
!! TCAATTGTCGATTTCGATCC+CGG - chr3_2:60019239-60019258 Msa0414480:intron 40.0%
TCTGAACTGAAAACGGAATG+AGG + chr3_2:60019389-60019408 None:intergenic 40.0%
ACAACACGTACCATAACTTC+TGG + chr3_2:60019431-60019450 None:intergenic 40.0%
GCAGAAGAATTTCTTGTTCC+TGG - chr3_2:60019598-60019617 Msa0414480:intron 40.0%
GATCAAAGGTGAATTAAGCC+AGG + chr3_2:60019619-60019638 None:intergenic 40.0%
AAAGAAGCAACAACGCGTTT+GGG - chr3_2:60019780-60019799 Msa0414480:intron 40.0%
!! CGTTTGGGTTAAGCTGTTTT+AGG - chr3_2:60019795-60019814 Msa0414480:intron 40.0%
GTGAATCTTGTTGCAAAAGG+GGG + chr3_2:60019838-60019857 None:intergenic 40.0%
CGTGAATCTTGTTGCAAAAG+GGG + chr3_2:60019839-60019858 None:intergenic 40.0%
TTGCCAAAGACGTGAAAATG+TGG + chr3_2:60019879-60019898 None:intergenic 40.0%
CAGACCAATCTTGAAAGAAG+TGG + chr3_2:60019905-60019924 None:intergenic 40.0%
! CACTTCTTTCAAGATTGGTC+TGG - chr3_2:60019903-60019922 Msa0414480:intron 40.0%
GGGCTTCATCAGAATTTCAT+TGG - chr3_2:60019924-60019943 Msa0414480:intron 40.0%
AGTAACGAAGTAAAATGGGG+GGG + chr3_2:60020007-60020026 None:intergenic 40.0%
!! TTTTCCCCACTTTGAGTTTG+AGG - chr3_2:60020079-60020098 Msa0414480:intron 40.0%
! TTTCCCCACTTTGAGTTTGA+GGG - chr3_2:60020080-60020099 Msa0414480:intron 40.0%
!! TGGTTCTAGGTCAAATGCAA+TGG + chr3_2:60018664-60018683 None:intergenic 40.0%
TTGCATTTGACCTAGAACCA+TGG - chr3_2:60018664-60018683 Msa0414480:CDS 40.0%
TTAGAGGATTCCATGGTTCT+AGG + chr3_2:60018677-60018696 None:intergenic 40.0%
AACAATGGCGCTGTGAAATA+AGG - chr3_2:60020720-60020739 Msa0414480:intron 40.0%
!!! TTTATTTTTGGTGCAGGCAC+AGG - chr3_2:60020805-60020824 Msa0414480:intron 40.0%
TCTCTTCCAATCAATTTCCC+TGG - chr3_2:60021071-60021090 Msa0414480:intron 40.0%
AGAAGGGAGGATTTGTCAAA+AGG - chr3_2:60021164-60021183 Msa0414480:intron 40.0%
GAAGTTGTCTAGAGATCAAG+AGG - chr3_2:60021343-60021362 Msa0414480:intron 40.0%
GAGTTGCTCAAGAATTGATG+AGG - chr3_2:60021763-60021782 Msa0414480:intron 40.0%
TAAATCCACCAAACAAGGGA+GGG + chr3_2:60021794-60021813 None:intergenic 40.0%
GATATGACATCCAAAAAGGG+TGG - chr3_2:60021844-60021863 Msa0414480:intron 40.0%
TAGGTATATTGGGCATCAAG+TGG - chr3_2:60021967-60021986 Msa0414480:intron 40.0%
CGAGATGGTTCAAACTTGTA+TGG + chr3_2:60022024-60022043 None:intergenic 40.0%
ATGGAAGGTAAGTAAAGGGT+GGG + chr3_2:60022071-60022090 None:intergenic 40.0%
AATGGAAGGTAAGTAAAGGG+TGG + chr3_2:60022072-60022091 None:intergenic 40.0%
CCCTTTACTTACCTTCCATT+TGG - chr3_2:60022072-60022091 Msa0414480:CDS 40.0%
CATAGGAAATGAGTTTGCCA+GGG - chr3_2:60022113-60022132 Msa0414480:CDS 40.0%
ATGGTCTCAATTGAATCCAG+AGG - chr3_2:60022179-60022198 Msa0414480:CDS 40.0%
TGACGAGTAATAGTTTCCTC+TGG + chr3_2:60022198-60022217 None:intergenic 40.0%
TGTAGACCTAAGGAAGGATA+TGG + chr3_2:60022228-60022247 None:intergenic 40.0%
! CTAACTTGTAGACCTAAGGA+AGG + chr3_2:60022234-60022253 None:intergenic 40.0%
CTTCCTTAGGTCTACAAGTT+AGG - chr3_2:60022232-60022251 Msa0414480:CDS 40.0%
! GCTCTGAGTGGATAGAAGAA+AGG - chr3_2:60017685-60017704 Msa0414480:CDS 45.0%
! CCTTTGAAAAACCGGCTGAA+CGG + chr3_2:60018022-60018041 None:intergenic 45.0%
! ATGATGCATTTGAGACCGGA+GGG + chr3_2:60018198-60018217 None:intergenic 45.0%
! AATGATGCATTTGAGACCGG+AGG + chr3_2:60018199-60018218 None:intergenic 45.0%
ATATTCGAGACCGAAGGGAT+TGG - chr3_2:60018252-60018271 Msa0414480:intron 45.0%
! AACATGGTATCAGAGCGCTA+TGG - chr3_2:60018702-60018721 Msa0414480:CDS 45.0%
AGAACACAAGGTTGCTGATG+CGG + chr3_2:60018802-60018821 None:intergenic 45.0%
!! TCCGCTTCGCAAGTTGTTTT+CGG - chr3_2:60018822-60018841 Msa0414480:CDS 45.0%
ACCGAAAACAACTTGCGAAG+CGG + chr3_2:60018826-60018845 None:intergenic 45.0%
!!! GTTGTTTTCGGTAGCTTTGG+CGG - chr3_2:60018834-60018853 Msa0414480:CDS 45.0%
! GATGGATTCACCATCACGAT+CGG - chr3_2:60018903-60018922 Msa0414480:CDS 45.0%
ATCAACCAGAGAACAGGGAA+CGG + chr3_2:60018931-60018950 None:intergenic 45.0%
AAGGCAGAAACGTCGTAAAC+AGG + chr3_2:60019149-60019168 None:intergenic 45.0%
! TTGTTCCTGTTTTCCGACGA+AGG + chr3_2:60019168-60019187 None:intergenic 45.0%
CGTCGGAAAACAGGAACAAA+CGG - chr3_2:60019169-60019188 Msa0414480:intron 45.0%
! GCAAGCGAAAATGGATTCGT+CGG + chr3_2:60019310-60019329 None:intergenic 45.0%
! GAATCCATTTTCGCTTGCGA+TGG - chr3_2:60019312-60019331 Msa0414480:intron 45.0%
GTTTCCATCGCAAGCGAAAA+TGG + chr3_2:60019319-60019338 None:intergenic 45.0%
AGTTTCTTTCCTCTGTCCCA+TGG + chr3_2:60019341-60019360 None:intergenic 45.0%
CACGTTTCACCCTTAGTTGT+TGG - chr3_2:60019484-60019503 Msa0414480:intron 45.0%
CGCGCTTATCCAACAACTAA+GGG + chr3_2:60019496-60019515 None:intergenic 45.0%
ACGCGCTTATCCAACAACTA+AGG + chr3_2:60019497-60019516 None:intergenic 45.0%
AGTTGTTGGATAAGCGCGTT+TGG - chr3_2:60019498-60019517 Msa0414480:intron 45.0%
AAGTGCTTCTCAAAGAAGCG+TGG - chr3_2:60019523-60019542 Msa0414480:intron 45.0%
! CTTCTCAAAGAAGCGTGGTT+TGG - chr3_2:60019528-60019547 Msa0414480:intron 45.0%
GTTACGTTCAGAATCCTGCT+TGG - chr3_2:60019550-60019569 Msa0414480:intron 45.0%
GCTGCAAATCAAATCCAAGC+AGG + chr3_2:60019567-60019586 None:intergenic 45.0%
!! TGTGATTCGGTGAGGATCAA+AGG + chr3_2:60019633-60019652 None:intergenic 45.0%
!! ATCATGGAAGCGTGCGTTTT+CGG - chr3_2:60019745-60019764 Msa0414480:intron 45.0%
GAAAGAAGCAACAACGCGTT+TGG - chr3_2:60019779-60019798 Msa0414480:intron 45.0%
AATTTCATTGGGCCTCACTC+TGG - chr3_2:60019936-60019955 Msa0414480:intron 45.0%
ATTTCATTGGGCCTCACTCT+GGG - chr3_2:60019937-60019956 Msa0414480:intron 45.0%
AACATAGAAAGCCCAGAGTG+AGG + chr3_2:60019951-60019970 None:intergenic 45.0%
! TTCCCCACTTTGAGTTTGAG+GGG - chr3_2:60020081-60020100 Msa0414480:intron 45.0%
! ATTTCCCTGGCACCTCATTT+TGG - chr3_2:60021084-60021103 Msa0414480:intron 45.0%
! CTTTTGGCCTCTCCAAAATG+AGG + chr3_2:60021099-60021118 None:intergenic 45.0%
!! CTCATTTTGGAGAGGCCAAA+AGG - chr3_2:60021097-60021116 Msa0414480:intron 45.0%
!! CAATTCTTGCCCTAGCCTTT+TGG + chr3_2:60021115-60021134 None:intergenic 45.0%
CTAAATCCACCAAACAAGGG+AGG + chr3_2:60021795-60021814 None:intergenic 45.0%
!! CTCCCTTGTTTGGTGGATTT+AGG - chr3_2:60021793-60021812 Msa0414480:intron 45.0%
! ATATCACCTGCCACCCTTTT+TGG + chr3_2:60021857-60021876 None:intergenic 45.0%
AGGTAAGTAAAGGGTGGGAT+TGG + chr3_2:60022066-60022085 None:intergenic 45.0%
!! ACTTACCTTCCATTTGGTGC+AGG - chr3_2:60022078-60022097 Msa0414480:CDS 45.0%
!! CTTACCTTCCATTTGGTGCA+GGG - chr3_2:60022079-60022098 Msa0414480:CDS 45.0%
TTATGAAGCCCTGCACCAAA+TGG + chr3_2:60022090-60022109 None:intergenic 45.0%
GCAGGGCTTCATAATTGCAT+AGG - chr3_2:60022096-60022115 Msa0414480:CDS 45.0%
GCATAGGAAATGAGTTTGCC+AGG - chr3_2:60022112-60022131 Msa0414480:CDS 45.0%
GGTAGTTAATGTCTCAACCC+TGG + chr3_2:60022133-60022152 None:intergenic 45.0%
CCTAAGGAAGGATATGGCAT+AGG + chr3_2:60022222-60022241 None:intergenic 45.0%
CCTATGCCATATCCTTCCTT+AGG - chr3_2:60022219-60022238 Msa0414480:CDS 45.0%
!! AAAAAAAAAAAAAATACTAA+TGG - chr3_2:60021606-60021625 Msa0414480:intron 5.0%
! GGATACCCCAAAGACCCTTT+TGG + chr3_2:60017615-60017634 None:intergenic 50.0%
! TTTCATACGTGCCGTTCAGC+CGG - chr3_2:60018008-60018027 Msa0414480:intron 50.0%
!! CCGTTCAGCCGGTTTTTCAA+AGG - chr3_2:60018019-60018038 Msa0414480:intron 50.0%
ACAGTGTGTAGAGCACAGCA+TGG - chr3_2:60018316-60018335 Msa0414480:intron 50.0%
TTGCGAAGCGGAAGAACACA+AGG + chr3_2:60018814-60018833 None:intergenic 50.0%
CCATGGTGAAGAAACAGGAG+TGG + chr3_2:60018868-60018887 None:intergenic 50.0%
! CCACTCCTGTTTCTTCACCA+TGG - chr3_2:60018865-60018884 Msa0414480:CDS 50.0%
GCGATCCATGGTGAAGAAAC+AGG + chr3_2:60018873-60018892 None:intergenic 50.0%
!! TCAGTTTCTGGTGCGATCCA+TGG + chr3_2:60018885-60018904 None:intergenic 50.0%
TGGATCGCACCAGAAACTGA+TGG - chr3_2:60018885-60018904 Msa0414480:CDS 50.0%
TACGACGTTTCTGCCTTCGT+CGG - chr3_2:60019152-60019171 Msa0414480:intron 50.0%
TTCTGCCTTCGTCGGAAAAC+AGG - chr3_2:60019160-60019179 Msa0414480:intron 50.0%
!! ATTGTCGATTTCGATCCCGG+CGG - chr3_2:60019242-60019261 Msa0414480:intron 50.0%
AACGAACCAATTCTTCCGCC+GGG + chr3_2:60019260-60019279 None:intergenic 50.0%
GAACGAACCAATTCTTCCGC+CGG + chr3_2:60019261-60019280 None:intergenic 50.0%
TTCGCTTGCGATGGAAACCA+TGG - chr3_2:60019321-60019340 Msa0414480:intron 50.0%
TCGCTTGCGATGGAAACCAT+GGG - chr3_2:60019322-60019341 Msa0414480:intron 50.0%
TGAGGAAGAACGCGACTCAA+TGG + chr3_2:60019371-60019390 None:intergenic 50.0%
!! TTCTGCAGTGTGATTCGGTG+AGG + chr3_2:60019641-60019660 None:intergenic 50.0%
GGGGGGTTAAGACTAGCAAA+TGG + chr3_2:60019990-60020009 None:intergenic 50.0%
! TCCCCACTTTGAGTTTGAGG+GGG - chr3_2:60020082-60020101 Msa0414480:intron 50.0%
TCCCCCTCAAACTCAAAGTG+GGG + chr3_2:60020086-60020105 None:intergenic 50.0%
GTCCCCCTCAAACTCAAAGT+GGG + chr3_2:60020087-60020106 None:intergenic 50.0%
AGTCCCCCTCAAACTCAAAG+TGG + chr3_2:60020088-60020107 None:intergenic 50.0%
TGCAGGCACAGGTTAGTGAA+GGG - chr3_2:60020816-60020835 Msa0414480:intron 50.0%
! GAGGTGCCAGGGAAATTGAT+TGG + chr3_2:60021080-60021099 None:intergenic 50.0%
! CTCTCCAAAATGAGGTGCCA+GGG + chr3_2:60021091-60021110 None:intergenic 50.0%
TTTGGAGAGGCCAAAAGGCT+AGG - chr3_2:60021102-60021121 Msa0414480:intron 50.0%
TTGGAGAGGCCAAAAGGCTA+GGG - chr3_2:60021103-60021122 Msa0414480:intron 50.0%
AGGATGATCCCTCCCTTGTT+TGG - chr3_2:60021783-60021802 Msa0414480:intron 50.0%
! ATGATCCCTCCCTTGTTTGG+TGG - chr3_2:60021786-60021805 Msa0414480:intron 50.0%
TGACATCCAAAAAGGGTGGC+AGG - chr3_2:60021848-60021867 Msa0414480:intron 50.0%
!! AGTAAAGGGTGGGATTGGCT+TGG + chr3_2:60022061-60022080 None:intergenic 50.0%
!! GGCAAGATAAGGGCTCTGAG+TGG - chr3_2:60017673-60017692 Msa0414480:CDS 55.0%
TTCGATCCCGGCGGAAGAAT+TGG - chr3_2:60019251-60019270 Msa0414480:intron 55.0%
CGATGGAAACCATGGGACAG+AGG - chr3_2:60019329-60019348 Msa0414480:intron 55.0%
GTGCAGGCACAGGTTAGTGA+AGG - chr3_2:60020815-60020834 Msa0414480:intron 55.0%
GCAGGCACAGGTTAGTGAAG+GGG - chr3_2:60020817-60020836 Msa0414480:intron 55.0%
CAGGCACAGGTTAGTGAAGG+GGG - chr3_2:60020818-60020837 Msa0414480:intron 55.0%
! CCTCTCCAAAATGAGGTGCC+AGG + chr3_2:60021092-60021111 None:intergenic 55.0%
!! CCTGGCACCTCATTTTGGAG+AGG - chr3_2:60021089-60021108 Msa0414480:intron 55.0%
GAAGCCCTGCACCAAATGGA+AGG + chr3_2:60022086-60022105 None:intergenic 55.0%
TGTAGGGGAACCCAGCAAGG+AGG + chr3_2:60017739-60017758 None:intergenic 60.0%
CACTGTAGGGGAACCCAGCA+AGG + chr3_2:60017742-60017761 None:intergenic 60.0%
!! GGGAACGGTACCGATCGTGA+TGG + chr3_2:60018916-60018935 None:intergenic 60.0%
CGGTACCGTTCCCTGTTCTC+TGG - chr3_2:60018923-60018942 Msa0414480:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60017500 60022442 60017500 ID=Msa0414480;Name=Msa0414480
chr3_2 mRNA 60017500 60022442 60017500 ID=Msa0414480-mRNA-1;Parent=Msa0414480;Name=Msa0414480-mRNA-1;_AED=0.03;_eAED=0.03;_QI=16|1|1|1|1|1|4|158|481
chr3_2 exon 60017500 60017972 60017500 ID=Msa0414480-mRNA-1:exon:12502;Parent=Msa0414480-mRNA-1
chr3_2 exon 60018073 60018263 60018073 ID=Msa0414480-mRNA-1:exon:12501;Parent=Msa0414480-mRNA-1
chr3_2 exon 60018556 60019121 60018556 ID=Msa0414480-mRNA-1:exon:12500;Parent=Msa0414480-mRNA-1
chr3_2 exon 60022053 60022442 60022053 ID=Msa0414480-mRNA-1:exon:12499;Parent=Msa0414480-mRNA-1
chr3_2 five_prime_UTR 60022427 60022442 60022427 ID=Msa0414480-mRNA-1:five_prime_utr;Parent=Msa0414480-mRNA-1
chr3_2 CDS 60022053 60022426 60022053 ID=Msa0414480-mRNA-1:cds;Parent=Msa0414480-mRNA-1
chr3_2 CDS 60018556 60019121 60018556 ID=Msa0414480-mRNA-1:cds;Parent=Msa0414480-mRNA-1
chr3_2 CDS 60018073 60018263 60018073 ID=Msa0414480-mRNA-1:cds;Parent=Msa0414480-mRNA-1
chr3_2 CDS 60017658 60017972 60017658 ID=Msa0414480-mRNA-1:cds;Parent=Msa0414480-mRNA-1
chr3_2 three_prime_UTR 60017500 60017657 60017500 ID=Msa0414480-mRNA-1:three_prime_utr;Parent=Msa0414480-mRNA-1
Gene Sequence

>Msa0414480

ATGGTTGATATACCTTTCATTGTATTATGTGCACTCACTTTGAGTTTAGTTTTTCTCCTCAAAAAAATTCTCTCAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCTTTGGGGTATCCTATTATTGGAGAAACACTTGATTTTCTTAAAGCACAAAGGCAAGATAAGGGCTCTGAGTGGATAGAAGAAAGGGTATCTAAATATGGTCCTGTTTTCAAAACCTCCTTGCTGGGTTCCCCTACAGTGTTTATTATTGGACAACAAGGAAACAAGTTTATTCTTGGTTCCTCAGATGATGTTTTGTCTGCTAACAAACCCCCTACCATTCAAAAGATACTTGGAAAGCAAACCCTAGCTGAACTTATAGGATCAAGGCACAGGTTAGTGAAGGGGGAAATGTTGAAATTCTTGAAACCTGAATGCCTTCAAAACTATGTGAAAAAGATGGATGAATTAGTTAACAGAATATTACTTAAGGAAATGAAAGAGAATAAAACAATTGAAGTTGTGAGGTTGATGAAGAAACTGTCCTATTATATGGCTTCCAATGTATTGTTTGACATAGATGATCACACAAGGGAAATTCTGTTTGAAGATTTTATCACAGCATTTAAAGCAATTCACTCTCTTCCAATCAATTTCCCTGGCACCTCATTTTGGAGAGGCCAAAAGGCTAGGGCAAGAATTGTAGCAAAGATACTTCCTATTATGAACAAAAGAAGGGAGGATTTGTCAAAAGGAGTTCTAAGCTCTACTAATGATATGCTTTCTTGTCTTCTTGCCATAAGGGATGAAAATCATCAACCTCTAGCTGATGACATAATTACAGACAATTTTATTTTTCTATTTGTTGCAAGTCATGACACATCTGCTACTCTTATGACCTTGATGATATGGAAGTTGTCTAGAGATCAAGAGGTTTACAATAAAGTTTTAGAAGAACAAATGGAAATTTTAAAGGAAAGGAAAGGAAATGAAGAAAGGCTAACATGGGGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCTCCCTTGTTTGGTGGATTTAGGAAAGCACTTAAAGATACTAGCTACCAAGGATATGACATCCAAAAAGGGTGGCAGGTATATTGGGCATCAAGTGGAACACATGAGAACAAAGATATATTTGAGAATCCATACAAGTTTGAACCATCTCGTTTTGAAAATCAAACCAAGCCAATCCCACCCTTTACTTACCTTCCATTTGGTGCAGGGCTTCATAATTGCATAGGAAATGAGTTTGCCAGGGTTGAGACATTAACTACCATTCACAATTTTGTGAAGATGTGTGAATGGTCTCAATTGAATCCAGAGGAAACTATTACTCGTCAACCTATGCCATATCCTTCCTTAGGTCTACAAGTTAGGATTAAACCAAGATGTAATATATCTTCTTAA
Protein sequence

>Msa0414480

MVDIPFIVLCALTLSLVFLLKKILSKSQTKNVPKGSLGYPIIGETLDFLKAQRQDKGSEWIEERVSKYGPVFKTSLLGSPTVFIIGQQGNKFILGSSDDVLSANKPPTIQKILGKQTLAELIGSRHRLVKGEMLKFLKPECLQNYVKKMDELVNRILLKEMKENKTIEVVRLMKKLSYYMASNVLFDIDDHTREILFEDFITAFKAIHSLPINFPGTSFWRGQKARARIVAKILPIMNKRREDLSKGVLSSTNDMLSCLLAIRDENHQPLADDIITDNFIFLFVASHDTSATLMTLMIWKLSRDQEVYNKVLEEQMEILKERKGNEERLTWGEIQKMKYTWRVAQELMRMIPPLFGGFRKALKDTSYQGYDIQKGWQVYWASSGTHENKDIFENPYKFEPSRFENQTKPIPPFTYLPFGAGLHNCIGNEFARVETLTTIHNFVKMCEWSQLNPEETITRQPMPYPSLGLQVRIKPRCNISS*