Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959160 | XP_004497487.1 | 26.437 | 261 | 179 | 6 | 670 | 925 | 298 | 550 | 2.36e-20 | 108 |
Msa0959160 | XP_004497487.1 | 72.433 | 526 | 145 | 0 | 1 | 526 | 1 | 526 | 0.0 | 822 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959160 | sp|Q6Q3H3|TPSGD_VITVI | 52.562 | 527 | 246 | 1 | 17 | 543 | 22 | 544 | 0.0 | 590 |
Msa0959160 | sp|Q6Q3H3|TPSGD_VITVI | 22.993 | 461 | 264 | 11 | 527 | 906 | 80 | 530 | 1.06e-28 | 125 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959160 | A0A1S2Y0Q7 | 26.437 | 261 | 179 | 6 | 670 | 925 | 298 | 550 | 1.13e-20 | 108 |
Msa0959160 | A0A1S2Y0Q7 | 72.433 | 526 | 145 | 0 | 1 | 526 | 1 | 526 | 0.0 | 822 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0920760 | Msa0959160 | 0.807032 | 6.160702e-50 | -8.615850e-47 |
Msa0959160 | Msa0959170 | 0.826866 | 2.144512e-54 | -8.615850e-47 |
Msa0959160 | Msa0959180 | 0.858168 | 9.912459e-63 | -8.615850e-47 |
Msa0959160 | Msa0959190 | 0.815371 | 9.568263e-52 | -8.615850e-47 |
Msa0959160 | Msa0959280 | 0.803359 | 3.619230e-49 | -8.615850e-47 |
Msa0959160 | Msa0995420 | 0.801456 | 8.927205e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959160 | MtrunA17_Chr7g0236991 | 68.927 | 531 | 161 | 2 | 1 | 531 | 1 | 527 | 0.0 | 778 |
Msa0959160 | MtrunA17_Chr7g0236991 | 29.388 | 245 | 162 | 7 | 670 | 911 | 295 | 531 | 2.46e-25 | 111 |
Msa0959160 | MtrunA17_Chr7g0237001 | 68.738 | 531 | 162 | 2 | 1 | 531 | 1 | 527 | 0.0 | 776 |
Msa0959160 | MtrunA17_Chr7g0237001 | 29.388 | 245 | 162 | 7 | 670 | 911 | 295 | 531 | 2.44e-25 | 111 |
Msa0959160 | MtrunA17_Chr7g0237041 | 68.738 | 531 | 162 | 2 | 1 | 531 | 1 | 527 | 0.0 | 776 |
Msa0959160 | MtrunA17_Chr7g0237041 | 29.388 | 245 | 162 | 7 | 670 | 911 | 295 | 531 | 2.44e-25 | 111 |
Msa0959160 | MtrunA17_Chr7g0237081 | 68.738 | 531 | 162 | 2 | 1 | 531 | 1 | 527 | 0.0 | 776 |
Msa0959160 | MtrunA17_Chr7g0237081 | 29.388 | 245 | 162 | 7 | 670 | 911 | 295 | 531 | 2.44e-25 | 111 |
Msa0959160 | MtrunA17_Chr7g0237051 | 68.738 | 531 | 162 | 2 | 1 | 531 | 1 | 527 | 0.0 | 776 |
Msa0959160 | MtrunA17_Chr7g0237051 | 29.388 | 245 | 162 | 7 | 670 | 911 | 295 | 531 | 2.44e-25 | 111 |
Msa0959160 | MtrunA17_Chr6g0466051 | 69.202 | 526 | 159 | 1 | 1 | 526 | 1 | 523 | 0.0 | 765 |
Msa0959160 | MtrunA17_Chr6g0466051 | 25.523 | 239 | 167 | 6 | 676 | 911 | 301 | 531 | 9.06e-21 | 97.4 |
Msa0959160 | MtrunA17_Chr6g0465911 | 69.011 | 526 | 160 | 1 | 1 | 526 | 1 | 523 | 0.0 | 763 |
Msa0959160 | MtrunA17_Chr6g0465911 | 21.915 | 470 | 272 | 14 | 527 | 911 | 72 | 531 | 3.38e-21 | 99.0 |
Msa0959160 | MtrunA17_Chr5g0425371 | 68.441 | 526 | 163 | 1 | 1 | 526 | 1 | 523 | 0.0 | 759 |
Msa0959160 | MtrunA17_Chr5g0425371 | 24.803 | 508 | 277 | 16 | 505 | 925 | 58 | 547 | 1.41e-26 | 115 |
Msa0959160 | MtrunA17_Chr6g0451711 | 65.789 | 532 | 180 | 2 | 1 | 531 | 1 | 531 | 0.0 | 745 |
Msa0959160 | MtrunA17_Chr6g0451711 | 28.679 | 265 | 176 | 8 | 666 | 925 | 295 | 551 | 8.23e-26 | 113 |
Msa0959160 | MtrunA17_Chr6g0465441 | 66.920 | 526 | 171 | 1 | 1 | 526 | 1 | 523 | 0.0 | 745 |
Msa0959160 | MtrunA17_Chr6g0465441 | 24.793 | 242 | 177 | 4 | 670 | 911 | 295 | 531 | 1.64e-21 | 99.8 |
Msa0959160 | MtrunA17_Chr3g0105071 | 65.977 | 532 | 179 | 2 | 1 | 531 | 1 | 531 | 0.0 | 738 |
Msa0959160 | MtrunA17_Chr3g0105071 | 24.754 | 509 | 273 | 16 | 492 | 911 | 48 | 535 | 1.86e-24 | 108 |
Msa0959160 | MtrunA17_Chr4g0024691 | 63.838 | 542 | 196 | 0 | 8 | 549 | 13 | 554 | 0.0 | 726 |
Msa0959160 | MtrunA17_Chr4g0024691 | 27.203 | 261 | 177 | 8 | 670 | 925 | 303 | 555 | 1.33e-25 | 112 |
Msa0959160 | MtrunA17_Chr3g0082691 | 63.321 | 548 | 198 | 2 | 12 | 558 | 8 | 553 | 0.0 | 724 |
Msa0959160 | MtrunA17_Chr3g0082691 | 28.571 | 245 | 164 | 6 | 670 | 911 | 295 | 531 | 1.67e-22 | 102 |
Msa0959160 | MtrunA17_Chr6g0477111 | 75.967 | 491 | 35 | 3 | 524 | 932 | 5 | 494 | 0.0 | 724 |
Msa0959160 | MtrunA17_Chr6g0477111 | 29.032 | 465 | 322 | 7 | 68 | 525 | 1 | 464 | 2.07e-62 | 219 |
Msa0959160 | MtrunA17_Chr6g0465851 | 70.226 | 487 | 145 | 0 | 40 | 526 | 2 | 488 | 0.0 | 720 |
Msa0959160 | MtrunA17_Chr6g0465851 | 21.915 | 470 | 272 | 14 | 527 | 911 | 37 | 496 | 2.47e-21 | 99.0 |
Msa0959160 | MtrunA17_Chr7g0236961 | 70.402 | 473 | 139 | 1 | 59 | 531 | 1 | 472 | 0.0 | 715 |
Msa0959160 | MtrunA17_Chr7g0236961 | 29.388 | 245 | 162 | 7 | 670 | 911 | 240 | 476 | 1.23e-25 | 112 |
Msa0959160 | MtrunA17_Chr7g0237011 | 70.402 | 473 | 139 | 1 | 59 | 531 | 1 | 472 | 0.0 | 714 |
Msa0959160 | MtrunA17_Chr7g0237011 | 29.388 | 245 | 162 | 7 | 670 | 911 | 240 | 476 | 1.23e-25 | 112 |
Msa0959160 | MtrunA17_Chr3g0108941 | 74.899 | 494 | 40 | 4 | 522 | 932 | 28 | 520 | 0.0 | 713 |
Msa0959160 | MtrunA17_Chr3g0108941 | 29.375 | 480 | 329 | 8 | 54 | 525 | 13 | 490 | 1.10e-64 | 227 |
Msa0959160 | MtrunA17_Chr3g0109001 | 75.101 | 494 | 39 | 4 | 522 | 932 | 28 | 520 | 0.0 | 712 |
Msa0959160 | MtrunA17_Chr3g0109001 | 29.668 | 482 | 325 | 8 | 54 | 525 | 13 | 490 | 2.79e-64 | 226 |
Msa0959160 | MtrunA17_Chr5g0431571 | 66.279 | 516 | 173 | 1 | 12 | 526 | 4 | 519 | 0.0 | 708 |
Msa0959160 | MtrunA17_Chr5g0431571 | 28.689 | 244 | 156 | 7 | 688 | 925 | 308 | 539 | 1.80e-21 | 99.8 |
Msa0959160 | MtrunA17_Chr5g0431651 | 63.265 | 539 | 196 | 2 | 13 | 549 | 7 | 545 | 0.0 | 703 |
Msa0959160 | MtrunA17_Chr5g0431651 | 23.191 | 470 | 267 | 13 | 527 | 911 | 70 | 530 | 3.18e-19 | 92.4 |
Msa0959160 | MtrunA17_Chr3g0108981 | 73.887 | 494 | 45 | 4 | 522 | 932 | 3 | 495 | 0.0 | 698 |
Msa0959160 | MtrunA17_Chr3g0108981 | 28.908 | 467 | 321 | 5 | 68 | 525 | 1 | 465 | 8.90e-62 | 218 |
Msa0959160 | MtrunA17_Chr3g0108961 | 73.887 | 494 | 45 | 4 | 522 | 932 | 3 | 495 | 0.0 | 698 |
Msa0959160 | MtrunA17_Chr3g0108961 | 28.908 | 467 | 321 | 5 | 68 | 525 | 1 | 465 | 8.90e-62 | 218 |
Msa0959160 | MtrunA17_Chr3g0108991 | 72.819 | 493 | 51 | 3 | 522 | 932 | 28 | 519 | 0.0 | 696 |
Msa0959160 | MtrunA17_Chr3g0108991 | 28.810 | 479 | 332 | 8 | 54 | 525 | 13 | 489 | 3.41e-61 | 217 |
Msa0959160 | MtrunA17_Chr3g0108951 | 72.819 | 493 | 51 | 3 | 522 | 932 | 28 | 519 | 0.0 | 696 |
Msa0959160 | MtrunA17_Chr3g0108951 | 28.810 | 479 | 332 | 8 | 54 | 525 | 13 | 489 | 3.41e-61 | 217 |
Msa0959160 | MtrunA17_Chr3g0109021 | 72.709 | 491 | 51 | 3 | 522 | 930 | 28 | 517 | 0.0 | 696 |
Msa0959160 | MtrunA17_Chr3g0109021 | 29.522 | 481 | 326 | 8 | 54 | 525 | 13 | 489 | 1.59e-63 | 223 |
Msa0959160 | MtrunA17_Chr3g0108971 | 72.819 | 493 | 51 | 3 | 522 | 932 | 3 | 494 | 0.0 | 695 |
Msa0959160 | MtrunA17_Chr3g0108971 | 28.387 | 465 | 325 | 7 | 68 | 525 | 1 | 464 | 7.54e-60 | 213 |
Msa0959160 | MtrunA17_Chr3g0109011 | 72.819 | 493 | 51 | 3 | 522 | 932 | 3 | 494 | 0.0 | 694 |
Msa0959160 | MtrunA17_Chr3g0109011 | 28.266 | 467 | 323 | 7 | 68 | 525 | 1 | 464 | 1.84e-59 | 211 |
Msa0959160 | MtrunA17_Chr3g0105691 | 72.617 | 493 | 52 | 3 | 522 | 932 | 61 | 552 | 0.0 | 693 |
Msa0959160 | MtrunA17_Chr3g0105691 | 29.707 | 478 | 329 | 6 | 54 | 525 | 46 | 522 | 2.65e-64 | 226 |
Msa0959160 | MtrunA17_Chr3g0109031 | 72.008 | 493 | 55 | 3 | 522 | 932 | 28 | 519 | 0.0 | 689 |
Msa0959160 | MtrunA17_Chr3g0109031 | 29.522 | 481 | 326 | 8 | 54 | 525 | 13 | 489 | 7.74e-65 | 227 |
Msa0959160 | MtrunA17_Chr4g0042111 | 56.341 | 552 | 236 | 4 | 9 | 558 | 14 | 562 | 0.0 | 645 |
Msa0959160 | MtrunA17_Chr4g0042111 | 28.906 | 256 | 175 | 5 | 670 | 925 | 304 | 552 | 7.04e-29 | 122 |
Msa0959160 | MtrunA17_Chr6g0477121 | 82.400 | 375 | 27 | 2 | 581 | 917 | 49 | 422 | 0.0 | 614 |
Msa0959160 | MtrunA17_Chr6g0477121 | 28.928 | 401 | 274 | 6 | 133 | 525 | 10 | 407 | 2.79e-53 | 192 |
Msa0959160 | MtrunA17_Chr3g0099031 | 63.202 | 481 | 94 | 3 | 527 | 925 | 33 | 512 | 0.0 | 598 |
Msa0959160 | MtrunA17_Chr3g0099031 | 29.854 | 479 | 327 | 8 | 54 | 525 | 13 | 489 | 1.77e-62 | 220 |
Msa0959160 | MtrunA17_Chr7g0236971 | 69.149 | 376 | 115 | 1 | 156 | 531 | 1 | 375 | 0.0 | 563 |
Msa0959160 | MtrunA17_Chr7g0236971 | 29.388 | 245 | 162 | 7 | 670 | 911 | 143 | 379 | 2.91e-26 | 112 |
Msa0959160 | MtrunA17_Chr6g0465981 | 71.011 | 376 | 106 | 1 | 1 | 376 | 1 | 373 | 0.0 | 557 |
Msa0959160 | MtrunA17_Chr6g0465871 | 71.011 | 376 | 106 | 1 | 1 | 376 | 1 | 373 | 0.0 | 557 |
Msa0959160 | MtrunA17_Chr6g0466081 | 71.011 | 376 | 106 | 1 | 1 | 376 | 1 | 373 | 0.0 | 557 |
Msa0959160 | MtrunA17_Chr2g0280581 | 58.471 | 484 | 117 | 4 | 527 | 927 | 37 | 519 | 0.0 | 546 |
Msa0959160 | MtrunA17_Chr2g0280581 | 28.743 | 501 | 332 | 8 | 42 | 525 | 2 | 494 | 3.16e-67 | 234 |
Msa0959160 | MtrunA17_Chr6g0466111 | 72.997 | 337 | 91 | 0 | 40 | 376 | 2 | 338 | 1.87e-176 | 514 |
Msa0959160 | MtrunA17_Chr6g0465931 | 72.700 | 337 | 92 | 0 | 40 | 376 | 2 | 338 | 2.78e-175 | 511 |
Msa0959160 | MtrunA17_Chr7g0236951 | 72.204 | 313 | 87 | 0 | 59 | 371 | 1 | 313 | 2.27e-165 | 485 |
Msa0959160 | MtrunA17_Chr7g0237031 | 72.204 | 313 | 87 | 0 | 59 | 371 | 1 | 313 | 5.05e-165 | 484 |
Msa0959160 | MtrunA17_Chr2g0319041 | 43.633 | 534 | 295 | 6 | 15 | 543 | 12 | 544 | 3.09e-159 | 479 |
Msa0959160 | MtrunA17_Chr2g0319041 | 22.128 | 470 | 265 | 11 | 527 | 906 | 72 | 530 | 1.41e-22 | 103 |
Msa0959160 | MtrunA17_Chr8g0336181 | 44.894 | 519 | 280 | 4 | 13 | 526 | 9 | 526 | 8.68e-158 | 475 |
Msa0959160 | MtrunA17_Chr8g0336181 | 24.291 | 494 | 268 | 17 | 525 | 925 | 70 | 550 | 4.69e-23 | 104 |
Msa0959160 | MtrunA17_Chr2g0319051 | 43.149 | 489 | 274 | 4 | 48 | 533 | 4 | 491 | 4.75e-148 | 448 |
Msa0959160 | MtrunA17_Chr2g0319051 | 26.616 | 263 | 176 | 10 | 670 | 925 | 256 | 508 | 3.85e-20 | 95.1 |
Msa0959160 | MtrunA17_Chr4g0008621 | 44.500 | 400 | 218 | 4 | 15 | 410 | 19 | 418 | 2.45e-115 | 360 |
Msa0959160 | MtrunA17_Chr5g0445511 | 65.546 | 238 | 82 | 0 | 152 | 389 | 2 | 239 | 2.03e-108 | 334 |
Msa0959160 | MtrunA17_Chr4g0023911 | 35.146 | 515 | 323 | 4 | 13 | 523 | 41 | 548 | 1.37e-105 | 339 |
Msa0959160 | MtrunA17_Chr4g0023911 | 36.402 | 239 | 147 | 4 | 670 | 908 | 323 | 556 | 2.30e-40 | 157 |
Msa0959160 | MtrunA17_Chr2g0319071 | 35.119 | 504 | 277 | 9 | 43 | 543 | 20 | 476 | 3.42e-100 | 322 |
Msa0959160 | MtrunA17_Chr2g0319071 | 22.196 | 428 | 270 | 11 | 527 | 906 | 50 | 462 | 1.95e-17 | 86.7 |
Msa0959160 | MtrunA17_Chr6g0466031 | 64.348 | 230 | 82 | 0 | 297 | 526 | 1 | 230 | 1.72e-99 | 311 |
Msa0959160 | MtrunA17_Chr6g0466031 | 25.523 | 239 | 167 | 6 | 676 | 911 | 8 | 238 | 1.73e-22 | 98.2 |
Msa0959160 | MtrunA17_Chr4g0048911 | 38.223 | 484 | 209 | 7 | 527 | 928 | 82 | 557 | 1.54e-98 | 320 |
Msa0959160 | MtrunA17_Chr4g0048911 | 30.962 | 478 | 317 | 6 | 55 | 525 | 61 | 532 | 2.34e-76 | 260 |
Msa0959160 | MtrunA17_Chr2g0310331 | 36.685 | 537 | 326 | 9 | 17 | 549 | 53 | 579 | 5.25e-98 | 320 |
Msa0959160 | MtrunA17_Chr2g0310331 | 26.708 | 483 | 259 | 10 | 527 | 925 | 109 | 580 | 3.36e-44 | 169 |
Msa0959160 | MtrunA17_Chr2g0323151 | 35.518 | 473 | 290 | 4 | 71 | 539 | 4 | 465 | 3.31e-96 | 311 |
Msa0959160 | MtrunA17_Chr2g0323151 | 28.041 | 485 | 245 | 8 | 527 | 925 | 8 | 474 | 1.24e-55 | 200 |
Msa0959160 | MtrunA17_Chr2g0323131 | 34.476 | 496 | 308 | 6 | 49 | 539 | 67 | 550 | 4.98e-96 | 313 |
Msa0959160 | MtrunA17_Chr2g0323131 | 28.601 | 486 | 242 | 9 | 527 | 925 | 92 | 559 | 3.41e-56 | 204 |
Msa0959160 | MtrunA17_Chr7g0237071 | 70.792 | 202 | 59 | 0 | 59 | 260 | 1 | 202 | 2.98e-94 | 296 |
Msa0959160 | MtrunA17_Chr6g0466021 | 69.608 | 204 | 59 | 1 | 1 | 204 | 1 | 201 | 1.10e-93 | 294 |
Msa0959160 | MtrunA17_Chr7g0237061 | 60.426 | 235 | 69 | 3 | 297 | 531 | 1 | 211 | 2.22e-89 | 284 |
Msa0959160 | MtrunA17_Chr7g0237061 | 27.347 | 245 | 144 | 9 | 670 | 911 | 2 | 215 | 7.11e-20 | 89.7 |
Msa0959160 | MtrunA17_Chr8g0357411 | 34.469 | 499 | 319 | 5 | 7 | 503 | 45 | 537 | 5.19e-88 | 293 |
Msa0959160 | MtrunA17_Chr8g0357411 | 25.103 | 486 | 264 | 11 | 527 | 925 | 111 | 583 | 6.96e-35 | 141 |
Msa0959160 | MtrunA17_Chr4g0048921 | 33.402 | 485 | 315 | 5 | 56 | 536 | 72 | 552 | 1.97e-82 | 277 |
Msa0959160 | MtrunA17_Chr4g0048921 | 35.729 | 487 | 219 | 9 | 524 | 925 | 88 | 565 | 1.48e-74 | 255 |
Msa0959160 | MtrunA17_Chr7g0237021 | 67.785 | 149 | 48 | 0 | 385 | 533 | 1 | 149 | 5.66e-68 | 224 |
Msa0959160 | MtrunA17_Chr7g0237021 | 25.974 | 154 | 110 | 3 | 758 | 911 | 1 | 150 | 6.05e-12 | 65.1 |
Msa0959160 | MtrunA17_Chr7g0236941 | 67.785 | 149 | 48 | 0 | 385 | 533 | 1 | 149 | 5.66e-68 | 224 |
Msa0959160 | MtrunA17_Chr7g0236941 | 25.974 | 154 | 110 | 3 | 758 | 911 | 1 | 150 | 6.05e-12 | 65.1 |
Msa0959160 | MtrunA17_Chr2g0319081 | 38.339 | 313 | 173 | 6 | 233 | 543 | 120 | 414 | 1.79e-66 | 229 |
Msa0959160 | MtrunA17_Chr2g0319081 | 24.147 | 381 | 229 | 9 | 527 | 906 | 79 | 400 | 1.37e-21 | 99.0 |
Msa0959160 | MtrunA17_Chr2g0319081 | 35.507 | 138 | 86 | 2 | 1 | 135 | 3 | 140 | 6.75e-21 | 96.7 |
Msa0959160 | MtrunA17_Chr2g0310401 | 34.127 | 378 | 245 | 3 | 130 | 504 | 5 | 381 | 1.23e-64 | 224 |
Msa0959160 | MtrunA17_Chr2g0310401 | 30.541 | 370 | 209 | 9 | 597 | 925 | 64 | 426 | 4.75e-40 | 154 |
Msa0959160 | MtrunA17_Chr5g0445501 | 62.585 | 147 | 54 | 1 | 385 | 531 | 1 | 146 | 1.03e-58 | 198 |
Msa0959160 | MtrunA17_Chr6g0465941 | 64.085 | 142 | 51 | 0 | 385 | 526 | 1 | 142 | 1.31e-58 | 198 |
Msa0959160 | MtrunA17_Chr6g0466121 | 64.085 | 142 | 51 | 0 | 385 | 526 | 1 | 142 | 1.31e-58 | 198 |
Msa0959160 | MtrunA17_Chr6g0465991 | 64.085 | 142 | 51 | 0 | 385 | 526 | 1 | 142 | 1.31e-58 | 198 |
Msa0959160 | MtrunA17_Chr6g0466091 | 64.085 | 142 | 51 | 0 | 385 | 526 | 1 | 142 | 1.31e-58 | 198 |
Msa0959160 | MtrunA17_Chr6g0465881 | 64.085 | 142 | 51 | 0 | 385 | 526 | 1 | 142 | 1.35e-58 | 198 |
Msa0959160 | MtrunA17_Chr7g0236981 | 65.185 | 135 | 44 | 1 | 1 | 135 | 1 | 132 | 3.55e-54 | 184 |
Msa0959160 | MtrunA17_Chr7g0236921 | 62.222 | 135 | 47 | 1 | 403 | 533 | 1 | 135 | 2.74e-53 | 182 |
Msa0959160 | MtrunA17_Chr7g0233861 | 63.704 | 135 | 40 | 1 | 196 | 330 | 33 | 158 | 1.25e-50 | 176 |
Msa0959160 | MtrunA17_Chr7g0236931 | 58.779 | 131 | 51 | 1 | 403 | 533 | 1 | 128 | 4.32e-50 | 173 |
Msa0959160 | MtrunA17_Chr7g0217361 | 33.333 | 270 | 179 | 1 | 255 | 523 | 8 | 277 | 1.35e-42 | 157 |
Msa0959160 | MtrunA17_Chr7g0217361 | 32.819 | 259 | 166 | 6 | 670 | 925 | 51 | 304 | 3.38e-39 | 148 |
Msa0959160 | MtrunA17_Chr8g0357231 | 33.333 | 261 | 161 | 8 | 670 | 925 | 1 | 253 | 7.59e-39 | 145 |
Msa0959160 | MtrunA17_Chr8g0357231 | 31.401 | 207 | 141 | 1 | 298 | 503 | 1 | 207 | 1.76e-30 | 121 |
Msa0959160 | MtrunA17_Chr8g0357221 | 35.743 | 249 | 153 | 4 | 10 | 257 | 48 | 290 | 1.08e-38 | 145 |
Msa0959160 | MtrunA17_Chr5g0445521 | 65.306 | 98 | 34 | 0 | 1 | 98 | 1 | 98 | 1.30e-37 | 136 |
Msa0959160 | MtrunA17_Chr3g0101681 | 28.169 | 426 | 265 | 13 | 70 | 464 | 276 | 691 | 1.22e-35 | 145 |
Msa0959160 | MtrunA17_Chr2g0310121 | 27.105 | 380 | 242 | 11 | 70 | 421 | 275 | 647 | 2.52e-34 | 141 |
Msa0959160 | MtrunA17_Chr5g0445401 | 69.474 | 95 | 25 | 2 | 166 | 257 | 1 | 94 | 1.21e-33 | 124 |
Msa0959160 | MtrunA17_Chr7g0259881 | 27.273 | 275 | 168 | 6 | 68 | 313 | 227 | 498 | 1.83e-23 | 106 |
Msa0959160 | MtrunA17_Chr7g0218001 | 29.562 | 274 | 161 | 6 | 68 | 310 | 344 | 616 | 7.50e-23 | 105 |
Msa0959160 | MtrunA17_Chr3g0082711 | 39.831 | 118 | 52 | 2 | 441 | 558 | 1 | 99 | 2.29e-20 | 87.0 |
Msa0959160 | MtrunA17_Chr7g0217351 | 29.167 | 216 | 146 | 4 | 46 | 258 | 62 | 273 | 3.96e-20 | 92.0 |
Msa0959160 | MtrunA17_Chr2g0281651 | 24.601 | 313 | 225 | 7 | 214 | 522 | 24 | 329 | 8.76e-19 | 90.1 |
Msa0959160 | MtrunA17_Chr2g0281651 | 26.126 | 222 | 153 | 6 | 667 | 886 | 104 | 316 | 1.51e-11 | 67.4 |
Msa0959160 | MtrunA17_Chr2g0310411 | 32.787 | 122 | 74 | 3 | 10 | 131 | 51 | 164 | 6.19e-14 | 70.9 |
Msa0959160 | MtrunA17_Chr7g0218041 | 30.380 | 237 | 140 | 6 | 120 | 332 | 3 | 238 | 1.00e-13 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959160 | AT5G23960.2 | 39.155 | 521 | 303 | 6 | 13 | 526 | 3 | 516 | 2.33e-132 | 409 |
Msa0959160 | AT5G23960.2 | 25.201 | 373 | 222 | 12 | 598 | 925 | 179 | 539 | 2.37e-25 | 112 |
Msa0959160 | AT5G23960.1 | 39.122 | 524 | 301 | 8 | 13 | 526 | 3 | 518 | 2.52e-131 | 406 |
Msa0959160 | AT5G23960.1 | 24.933 | 373 | 225 | 12 | 598 | 925 | 179 | 541 | 2.59e-25 | 112 |
Msa0959160 | AT1G70080.1 | 36.984 | 557 | 339 | 9 | 8 | 555 | 57 | 610 | 1.44e-122 | 385 |
Msa0959160 | AT1G70080.1 | 24.621 | 264 | 189 | 8 | 665 | 924 | 347 | 604 | 1.56e-18 | 91.3 |
Msa0959160 | AT3G14490.1 | 37.044 | 521 | 321 | 3 | 17 | 533 | 60 | 577 | 1.57e-115 | 367 |
Msa0959160 | AT3G14490.1 | 21.723 | 267 | 194 | 9 | 665 | 925 | 338 | 595 | 2.50e-13 | 74.3 |
Msa0959160 | AT3G14520.1 | 35.727 | 543 | 335 | 6 | 22 | 558 | 68 | 602 | 1.44e-113 | 362 |
Msa0959160 | AT3G14520.1 | 21.545 | 246 | 181 | 7 | 665 | 906 | 340 | 577 | 1.60e-11 | 68.6 |
Msa0959160 | AT1G31950.3 | 35.636 | 550 | 327 | 7 | 22 | 558 | 70 | 605 | 5.33e-111 | 355 |
Msa0959160 | AT1G31950.3 | 23.558 | 208 | 148 | 7 | 665 | 869 | 343 | 542 | 2.91e-15 | 80.5 |
Msa0959160 | AT1G31950.1 | 36.096 | 543 | 333 | 6 | 22 | 558 | 70 | 604 | 5.40e-111 | 355 |
Msa0959160 | AT1G31950.1 | 23.558 | 208 | 148 | 7 | 665 | 869 | 342 | 541 | 2.93e-15 | 80.5 |
Msa0959160 | AT3G14540.1 | 35.978 | 542 | 335 | 5 | 22 | 558 | 65 | 599 | 6.29e-111 | 354 |
Msa0959160 | AT3G14540.1 | 22.115 | 208 | 151 | 6 | 665 | 869 | 337 | 536 | 3.27e-12 | 70.9 |
Msa0959160 | AT3G29410.1 | 35.352 | 512 | 327 | 3 | 17 | 526 | 64 | 573 | 1.64e-105 | 340 |
Msa0959160 | AT3G29410.1 | 20.248 | 242 | 188 | 4 | 665 | 906 | 340 | 576 | 3.05e-11 | 67.8 |
Msa0959160 | AT3G32030.1 | 33.648 | 529 | 338 | 6 | 2 | 526 | 54 | 573 | 2.38e-105 | 340 |
Msa0959160 | AT5G44630.1 | 34.239 | 552 | 342 | 10 | 18 | 558 | 14 | 555 | 1.19e-102 | 331 |
Msa0959160 | AT1G33750.1 | 34.524 | 504 | 324 | 4 | 24 | 525 | 73 | 572 | 1.39e-101 | 330 |
Msa0959160 | AT1G33750.1 | 22.053 | 263 | 196 | 7 | 665 | 926 | 340 | 594 | 9.26e-16 | 82.0 |
Msa0959160 | AT4G20200.1 | 35.729 | 487 | 299 | 8 | 48 | 525 | 92 | 573 | 4.09e-101 | 328 |
Msa0959160 | AT1G31950.2 | 36.501 | 463 | 271 | 6 | 22 | 471 | 70 | 522 | 1.38e-100 | 325 |
Msa0959160 | AT1G31950.2 | 25.294 | 170 | 117 | 7 | 665 | 831 | 343 | 505 | 4.31e-12 | 70.1 |
Msa0959160 | AT3G14540.2 | 37.444 | 446 | 272 | 3 | 22 | 463 | 65 | 507 | 1.40e-100 | 324 |
Msa0959160 | AT4G20210.1 | 33.981 | 515 | 327 | 7 | 17 | 523 | 58 | 567 | 7.21e-100 | 325 |
Msa0959160 | AT3G29410.2 | 35.745 | 470 | 298 | 3 | 59 | 526 | 1 | 468 | 8.80e-100 | 322 |
Msa0959160 | AT3G29410.2 | 20.248 | 242 | 188 | 4 | 665 | 906 | 235 | 471 | 3.17e-11 | 67.4 |
Msa0959160 | AT4G13300.1 | 34.175 | 515 | 329 | 6 | 25 | 533 | 20 | 530 | 2.18e-99 | 322 |
Msa0959160 | AT4G15870.1 | 34.638 | 511 | 308 | 10 | 25 | 526 | 75 | 568 | 5.54e-95 | 312 |
Msa0959160 | AT4G13280.2 | 33.723 | 513 | 330 | 6 | 27 | 533 | 22 | 530 | 1.35e-94 | 310 |
Msa0959160 | AT4G20230.1 | 33.745 | 486 | 310 | 6 | 48 | 525 | 92 | 573 | 5.67e-94 | 310 |
Msa0959160 | AT4G20230.1 | 21.887 | 265 | 196 | 9 | 666 | 925 | 341 | 599 | 3.12e-11 | 67.8 |
Msa0959160 | AT4G20230.2 | 33.745 | 486 | 310 | 6 | 48 | 525 | 104 | 585 | 6.09e-94 | 310 |
Msa0959160 | AT4G20230.2 | 21.887 | 265 | 196 | 9 | 666 | 925 | 353 | 611 | 3.93e-11 | 67.4 |
Msa0959160 | AT3G29190.1 | 33.402 | 488 | 309 | 7 | 48 | 525 | 89 | 570 | 6.67e-94 | 309 |
Msa0959160 | AT3G29110.1 | 34.766 | 512 | 321 | 9 | 17 | 518 | 55 | 563 | 1.06e-92 | 306 |
Msa0959160 | AT2G23230.2 | 33.973 | 521 | 329 | 9 | 16 | 526 | 55 | 570 | 2.83e-91 | 302 |
Msa0959160 | AT2G23230.1 | 33.781 | 521 | 325 | 10 | 16 | 526 | 55 | 565 | 7.39e-89 | 296 |
Msa0959160 | AT1G66020.1 | 32.621 | 515 | 338 | 6 | 17 | 525 | 56 | 567 | 1.12e-88 | 295 |
Msa0959160 | AT4G16730.1 | 32.609 | 506 | 320 | 8 | 42 | 533 | 17 | 515 | 3.35e-87 | 289 |
Msa0959160 | AT4G16730.1 | 32.061 | 262 | 166 | 6 | 670 | 925 | 278 | 533 | 7.87e-37 | 147 |
Msa0959160 | AT1G48800.1 | 32.370 | 519 | 335 | 9 | 17 | 525 | 63 | 575 | 6.91e-86 | 288 |
Msa0959160 | AT4G16730.2 | 33.053 | 475 | 298 | 7 | 73 | 533 | 1 | 469 | 1.89e-84 | 280 |
Msa0959160 | AT4G16730.2 | 32.061 | 262 | 166 | 6 | 670 | 925 | 232 | 487 | 6.01e-37 | 146 |
Msa0959160 | AT1G61680.1 | 33.054 | 478 | 308 | 4 | 54 | 525 | 77 | 548 | 6.16e-84 | 281 |
Msa0959160 | AT1G61680.1 | 44.944 | 267 | 141 | 4 | 659 | 925 | 309 | 569 | 5.74e-71 | 246 |
Msa0959160 | AT2G24210.1 | 31.915 | 564 | 359 | 12 | 10 | 559 | 39 | 591 | 1.80e-83 | 281 |
Msa0959160 | AT2G24210.1 | 25.101 | 494 | 268 | 14 | 524 | 925 | 101 | 584 | 1.52e-30 | 128 |
Msa0959160 | AT4G13280.1 | 32.749 | 513 | 305 | 8 | 27 | 533 | 22 | 500 | 2.80e-83 | 278 |
Msa0959160 | AT4G16740.1 | 32.103 | 542 | 341 | 13 | 4 | 533 | 14 | 540 | 2.86e-81 | 274 |
Msa0959160 | AT4G16740.1 | 26.844 | 488 | 257 | 13 | 527 | 925 | 82 | 558 | 2.48e-36 | 145 |
Msa0959160 | AT1G61680.2 | 32.636 | 478 | 303 | 5 | 54 | 525 | 77 | 541 | 9.90e-81 | 272 |
Msa0959160 | AT1G61680.2 | 44.944 | 267 | 141 | 4 | 659 | 925 | 302 | 562 | 3.24e-71 | 246 |
Msa0959160 | AT1G48820.1 | 31.299 | 508 | 300 | 10 | 17 | 519 | 63 | 526 | 9.91e-79 | 267 |
Msa0959160 | AT5G48110.1 | 38.339 | 313 | 189 | 4 | 215 | 526 | 1 | 310 | 4.14e-77 | 255 |
Msa0959160 | AT5G48110.1 | 24.111 | 253 | 184 | 6 | 665 | 917 | 80 | 324 | 2.62e-17 | 85.1 |
Msa0959160 | AT3G25820.1 | 30.071 | 562 | 365 | 12 | 15 | 559 | 45 | 595 | 6.09e-76 | 260 |
Msa0959160 | AT3G25820.1 | 25.000 | 492 | 269 | 13 | 527 | 925 | 104 | 588 | 8.76e-32 | 132 |
Msa0959160 | AT3G25830.1 | 30.071 | 562 | 365 | 12 | 15 | 559 | 45 | 595 | 6.09e-76 | 260 |
Msa0959160 | AT3G25830.1 | 25.000 | 492 | 269 | 13 | 527 | 925 | 104 | 588 | 8.76e-32 | 132 |
Msa0959160 | AT3G25810.1 | 30.249 | 562 | 367 | 11 | 15 | 559 | 45 | 598 | 8.34e-74 | 254 |
Msa0959160 | AT3G25810.1 | 29.457 | 258 | 171 | 5 | 675 | 925 | 338 | 591 | 5.03e-29 | 124 |
Msa0959160 | AT4G16740.2 | 34.190 | 389 | 234 | 9 | 4 | 381 | 14 | 391 | 8.34e-65 | 224 |
Msa0959160 | AT1G66020.2 | 34.146 | 369 | 234 | 6 | 17 | 379 | 56 | 421 | 9.22e-65 | 224 |
Msa0959160 | AT3G25820.2 | 32.216 | 388 | 240 | 9 | 15 | 389 | 45 | 422 | 2.45e-59 | 210 |
Msa0959160 | AT4G16740.4 | 34.320 | 338 | 201 | 8 | 4 | 330 | 14 | 341 | 4.83e-55 | 196 |
Msa0959160 | AT4G16740.3 | 34.320 | 338 | 201 | 8 | 4 | 330 | 14 | 341 | 4.83e-55 | 196 |
Msa0959160 | AT3G25820.4 | 32.927 | 328 | 199 | 7 | 15 | 330 | 45 | 363 | 2.85e-52 | 188 |
Msa0959160 | AT3G25820.3 | 32.927 | 328 | 199 | 7 | 15 | 330 | 45 | 363 | 2.85e-52 | 188 |
Msa0959160 | AT1G79460.1 | 27.763 | 389 | 230 | 15 | 70 | 422 | 274 | 647 | 1.37e-26 | 117 |
Msa0959160 | AT1G61120.1 | 23.705 | 502 | 351 | 10 | 68 | 546 | 286 | 778 | 9.63e-25 | 111 |
Msa0959160 | AT1G61120.1 | 24.537 | 216 | 154 | 4 | 671 | 886 | 530 | 736 | 1.69e-11 | 68.9 |
Msa0959160 | AT4G02780.1 | 29.502 | 261 | 154 | 6 | 68 | 300 | 329 | 587 | 8.31e-23 | 105 |
Find 162 sgRNAs with CRISPR-Local
Find 778 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6_3:-75542116 | Msa0959160:CDS |
TTATGGCTTGTCAAGATTTA+TGG | 0.112776 | 6_3:-75530399 | Msa0959160:CDS |
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6_3:-75541152 | Msa0959160:CDS |
CATTCTCAGCCTTCAAATTA+TGG | 0.159152 | 6_3:+75530360 | None:intergenic |
TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6_3:-75542115 | Msa0959160:CDS |
TGCAGCATTGAGACCAAAAT+TGG | 0.215627 | 6_3:+75529082 | None:intergenic |
TTCCTGTTGGATCATGTTAA+TGG | 0.219587 | 6_3:-75529501 | Msa0959160:CDS |
GTCCTCTTCAGCAAAATTAT+TGG | 0.222518 | 6_3:+75529794 | None:intergenic |
CTTCAGAATCCACTTCATTA+TGG | 0.241107 | 6_3:-75530416 | Msa0959160:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_3:+75540879 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6_3:+75541164 | None:intergenic |
AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6_3:-75541112 | Msa0959160:CDS |
TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6_3:-75542165 | Msa0959160:CDS |
AAACTTCAGTGGTCTCATTC+TGG | 0.295174 | 6_3:+75530279 | None:intergenic |
AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6_3:-75542196 | Msa0959160:CDS |
AGTGTTCAATGTCAAACTTT+TGG | 0.307393 | 6_3:+75531079 | None:intergenic |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6_3:+75540837 | None:intergenic |
CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6_3:-75542668 | Msa0959160:CDS |
AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6_3:-75542667 | Msa0959160:CDS |
GAGGCTCGTTGGTTGAATTC+TGG | 0.329216 | 6_3:-75529603 | Msa0959160:CDS |
TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6_3:+75542702 | None:intergenic |
TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_3:-75540475 | Msa0959160:CDS |
GAATGATTTGATATGTTTAG+AGG | 0.336259 | 6_3:-75530342 | Msa0959160:CDS |
ATGCTGCTGCTATACATTGT+AGG | 0.337003 | 6_3:-75539401 | Msa0959160:CDS |
ATTTCCAAATGTCATATATT+CGG | 0.339807 | 6_3:-75529442 | Msa0959160:CDS |
TGAGGGAATATGATTTGAAT+AGG | 0.340079 | 6_3:-75539193 | Msa0959160:CDS |
ACAAACCTGCATTTACATAA+TGG | 0.342586 | 6_3:+75530926 | None:intergenic |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6_3:+75541440 | None:intergenic |
GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_3:-75540924 | Msa0959160:CDS |
CTGCTATACATTGTAGGCTT+AGG | 0.348781 | 6_3:-75539395 | Msa0959160:CDS |
TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6_3:+75542336 | None:intergenic |
AAAGGAGACAATTGATATCT+TGG | 0.357270 | 6_3:-75529472 | Msa0959160:CDS |
CGTCTCTCTGATGATTTAGA+AGG | 0.358143 | 6_3:-75529405 | Msa0959160:CDS |
TGCACTTGCATTCCGCTTGT+TGG | 0.361053 | 6_3:-75530959 | Msa0959160:CDS |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6_3:-75539225 | Msa0959160:CDS |
CTGTGCTATTTAGGGTGTTA+AGG | 0.361426 | 6_3:-75542107 | Msa0959160:CDS |
GTGCAACTTCATAGAGTTCA+TGG | 0.366667 | 6_3:+75530977 | None:intergenic |
TTCAAGTAATCTTCTGCCCT+TGG | 0.369642 | 6_3:+75529573 | None:intergenic |
AGGACGAGCAAGGAAACTTC+AGG | 0.379749 | 6_3:-75541432 | Msa0959160:CDS |
GCCACCGAATATATGACATT+TGG | 0.380960 | 6_3:+75529438 | None:intergenic |
CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6_3:-75542709 | Msa0959160:CDS |
GGTTCATGGTGAAGAAATAT+TGG | 0.385958 | 6_3:-75541350 | Msa0959160:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6_3:+75541165 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6_3:-75539211 | Msa0959160:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6_3:+75541186 | None:intergenic |
GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6_3:-75542238 | Msa0959160:CDS |
GGAGATCAAAATGGTCTTGA+TGG | 0.391215 | 6_3:-75529248 | Msa0959160:CDS |
ACGCTTATTGAACGCTTTCA+TGG | 0.397704 | 6_3:-75529628 | Msa0959160:CDS |
TCAATGACTTGACATGTTCC+TGG | 0.398779 | 6_3:+75529006 | None:intergenic |
CATATTCATCCATAATTTGA+AGG | 0.398914 | 6_3:-75530369 | Msa0959160:CDS |
ATGTCTTTGCACGTCTTCAC+TGG | 0.401485 | 6_3:+75529184 | None:intergenic |
TAAAGCAACTTCGTGTAATC+CGG | 0.404734 | 6_3:+75540456 | None:intergenic |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_3:-75540442 | Msa0959160:CDS |
GCACTTGCATTCCGCTTGTT+GGG | 0.410406 | 6_3:-75530958 | Msa0959160:CDS |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6_3:+75539540 | None:intergenic |
TGGTCTCAATGCTGCAAGAA+TGG | 0.421575 | 6_3:-75529075 | Msa0959160:CDS |
TATTCACAGATGCTATTAAC+AGG | 0.434148 | 6_3:-75529979 | Msa0959160:intron |
TGTACATGCATTCTTCCTGT+TGG | 0.435196 | 6_3:-75529514 | Msa0959160:CDS |
TGGCTACTCACAAAATCAAT+AGG | 0.436198 | 6_3:+75530997 | None:intergenic |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6_3:-75539148 | Msa0959160:CDS |
TTCTGGTCACCTTGAGTCCA+TGG | 0.446304 | 6_3:-75541308 | Msa0959160:CDS |
CTCGCATGATATCAAATGAA+TGG | 0.448566 | 6_3:-75529157 | Msa0959160:CDS |
GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6_3:-75541119 | Msa0959160:CDS |
TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_3:-75540487 | Msa0959160:CDS |
TGAATTCTGGTCACTTTCCA+AGG | 0.453499 | 6_3:-75529590 | Msa0959160:CDS |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6_3:-75539481 | Msa0959160:CDS |
TGCTATACATTGTAGGCTTA+GGG | 0.457944 | 6_3:-75539394 | Msa0959160:CDS |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6_3:+75539566 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6_3:-75541161 | Msa0959160:CDS |
GCAGAAGATTACTTGAACAA+TGG | 0.460685 | 6_3:-75529567 | Msa0959160:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6_3:-75539480 | Msa0959160:CDS |
GATGACACATATGATGCATA+TGG | 0.467097 | 6_3:-75540820 | Msa0959160:CDS |
GTTCATGAATCTAACTATGC+TGG | 0.468399 | 6_3:+75530301 | None:intergenic |
GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_3:-75540402 | Msa0959160:CDS |
CGTCTTCACTGGAAATATCT+TGG | 0.470727 | 6_3:+75529195 | None:intergenic |
ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6_3:-75542237 | Msa0959160:CDS |
GAGGGAATATGATTTGAATA+GGG | 0.475500 | 6_3:-75539192 | Msa0959160:CDS |
CGATGTTCATCACGGGACAT+TGG | 0.478802 | 6_3:-75530014 | Msa0959160:CDS |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6_3:+75541281 | None:intergenic |
TCCTTATGCTTCAGAATCTA+CGG | 0.489323 | 6_3:-75542631 | Msa0959160:intron |
ATATAGGTGGTGGAAGGAGT+TGG | 0.489574 | 6_3:-75540980 | Msa0959160:intron |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6_3:-75539132 | Msa0959160:CDS |
TTGAGAACACACGTAAGAAT+AGG | 0.491590 | 6_3:+75539080 | None:intergenic |
ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_3:+75540894 | None:intergenic |
TACCATTAACATGATCCAAC+AGG | 0.495159 | 6_3:+75529499 | None:intergenic |
TGATTCAGGTGGGAAATCAC+TGG | 0.502831 | 6_3:-75529873 | Msa0959160:intron |
ATAACATAAATTAAAGAGAT+GGG | 0.506142 | 6_3:+75530049 | None:intergenic |
ATTGAACGCTTTCATGGAAG+AGG | 0.507658 | 6_3:-75529622 | Msa0959160:CDS |
CCTGGAGATTAGAGAGGCTA+GGG | 0.509945 | 6_3:+75529024 | None:intergenic |
TCATTGATTAATGTTGGTGT+TGG | 0.511785 | 6_3:-75528990 | Msa0959160:CDS |
CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6_3:-75542081 | Msa0959160:intron |
AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6_3:+75541291 | None:intergenic |
AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6_3:-75541452 | Msa0959160:CDS |
AACATTGGTCAGAGATGTTG+AGG | 0.517806 | 6_3:-75541407 | Msa0959160:CDS |
CGACAAAAGACATCTTTGAC+TGG | 0.519009 | 6_3:-75539449 | Msa0959160:CDS |
TGGTGTTCAACATCAAATGC+AGG | 0.519731 | 6_3:+75531022 | None:intergenic |
GGCTAGGGTTGCTCTTATAG+TGG | 0.520802 | 6_3:+75529039 | None:intergenic |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6_3:+75541214 | None:intergenic |
ACTCACAAAATCAATAGGAT+TGG | 0.522171 | 6_3:+75531002 | None:intergenic |
GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6_3:-75541364 | Msa0959160:CDS |
ACCGTAGATTCTGAAGCATA+AGG | 0.522637 | 6_3:+75542630 | None:intergenic |
TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6_3:+75539492 | None:intergenic |
CCCTAGCCTCTCTAATCTCC+AGG | 0.523650 | 6_3:-75529024 | Msa0959160:CDS |
AATAACATAAATTAAAGAGA+TGG | 0.528586 | 6_3:+75530048 | None:intergenic |
GCATTCCGCTTGTTGGGACA+AGG | 0.528852 | 6_3:-75530952 | Msa0959160:CDS |
GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_3:-75540484 | Msa0959160:CDS |
ATAGGTAACGGAACTTCAGT+TGG | 0.529746 | 6_3:+75539098 | None:intergenic |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6_3:+75539586 | None:intergenic |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_3:+75540880 | None:intergenic |
GGACGAGCAAGGAAACTTCA+GGG | 0.537629 | 6_3:-75541431 | Msa0959160:CDS |
ATGCAGAGTGGAGATCAAAA+TGG | 0.538910 | 6_3:-75529257 | Msa0959160:intron |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6_3:-75539245 | Msa0959160:intron |
CTTTCATGGAAGAGGCTCGT+TGG | 0.539250 | 6_3:-75529614 | Msa0959160:CDS |
GGAGGCCATTATGTAAATGC+AGG | 0.542512 | 6_3:-75530931 | Msa0959160:intron |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6_3:+75541282 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_3:-75540882 | Msa0959160:CDS |
GTTGTGAGCTTCTACATGCA+TGG | 0.547964 | 6_3:-75530487 | Msa0959160:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6_3:-75539581 | Msa0959160:CDS |
GTCAAGTCATTGATTAATGT+TGG | 0.552813 | 6_3:-75528996 | Msa0959160:CDS |
TGCTCTTATAGTGGTACATG+AGG | 0.558159 | 6_3:+75529048 | None:intergenic |
TGGTGAAGAAATATTGGAAG+AGG | 0.558532 | 6_3:-75541344 | Msa0959160:CDS |
TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6_3:+75541271 | None:intergenic |
CTTGACAAGCCATAATGAAG+TGG | 0.560012 | 6_3:+75530407 | None:intergenic |
ATCGGGTGGCCATGGACTCA+AGG | 0.566605 | 6_3:+75541299 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6_3:-75539210 | Msa0959160:CDS |
GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6_3:-75541371 | Msa0959160:CDS |
AGGAAACTTCAGGGAAACAT+TGG | 0.570522 | 6_3:-75541422 | Msa0959160:CDS |
ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6_3:-75539505 | Msa0959160:CDS |
GAGATCAAAATGGTCTTGAT+GGG | 0.575439 | 6_3:-75529247 | Msa0959160:CDS |
TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6_3:-75539486 | Msa0959160:CDS |
TCCAAATGTCATATATTCGG+TGG | 0.588331 | 6_3:-75529439 | Msa0959160:CDS |
ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_3:+75540940 | None:intergenic |
TGATGATTTAGAAGGAGCTA+AGG | 0.590500 | 6_3:-75529397 | Msa0959160:intron |
AACATACTTGGAAACTTCAG+TGG | 0.593151 | 6_3:+75530268 | None:intergenic |
GGCCTCCTTGTCCCAACAAG+CGG | 0.593472 | 6_3:+75530947 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6_3:-75539519 | Msa0959160:CDS |
GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6_3:-75542666 | Msa0959160:CDS |
TCCTGGAGATTAGAGAGGCT+AGG | 0.598275 | 6_3:+75529023 | None:intergenic |
TTTAGGGTGTTAAGGCAACA+TGG | 0.599299 | 6_3:-75542099 | Msa0959160:CDS |
AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6_3:+75542661 | None:intergenic |
CATTGAACACTACTTTGCTG+AGG | 0.602011 | 6_3:-75531067 | Msa0959160:CDS |
CTGTATATATAGGTGGTGGA+AGG | 0.602289 | 6_3:-75540986 | Msa0959160:intron |
CATGTTCCTGGAGATTAGAG+AGG | 0.609472 | 6_3:+75529018 | None:intergenic |
AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6_3:+75539493 | None:intergenic |
GAATTCTGGTCACTTTCCAA+GGG | 0.614355 | 6_3:-75529589 | Msa0959160:CDS |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6_3:-75541442 | Msa0959160:CDS |
CTCTTATAGTGGTACATGAG+GGG | 0.624772 | 6_3:+75529050 | None:intergenic |
GCTCTTATAGTGGTACATGA+GGG | 0.626134 | 6_3:+75529049 | None:intergenic |
GACAAAAGACATCTTTGACT+GGG | 0.626667 | 6_3:-75539448 | Msa0959160:CDS |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6_3:-75539589 | Msa0959160:CDS |
TCATGTTAATGGTATAACAA+AGG | 0.647754 | 6_3:-75529490 | Msa0959160:CDS |
TTCCGCTTGTTGGGACAAGG+AGG | 0.650249 | 6_3:-75530949 | Msa0959160:CDS |
ATGCATGTACAAGCACAACA+TGG | 0.663760 | 6_3:+75529526 | None:intergenic |
CTTTGCTGAGGAGATCAAAG+TGG | 0.665427 | 6_3:-75531055 | Msa0959160:CDS |
ACCATGAACCATCATATGTG+AGG | 0.665974 | 6_3:+75541363 | None:intergenic |
GGATGAAATTGTGTCAAGCG+AGG | 0.675331 | 6_3:-75539373 | Msa0959160:intron |
ACATTGGTCAGAGATGTTGA+GGG | 0.676254 | 6_3:-75541406 | Msa0959160:CDS |
ACACACGTAAGAATAGGTAA+CGG | 0.686084 | 6_3:+75539086 | None:intergenic |
CATGTAGAAGCTCACAACAG+AGG | 0.687627 | 6_3:+75530492 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6_3:+75541285 | None:intergenic |
GGAACCTGATATGAATACTG+CGG | 0.696636 | 6_3:-75542340 | Msa0959160:CDS |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6_3:-75539550 | Msa0959160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTATAATTTATAATA+GGG | + | chr6_3:75536916-75536935 | None:intergenic | 0.0% |
!!! | TATATTTTATAATTTATAAT+AGG | + | chr6_3:75536917-75536936 | None:intergenic | 0.0% |
!!! | ATATATTTTTTTTAAAAAAA+AGG | - | chr6_3:75537617-75537636 | Msa0959160:intron | 0.0% |
!!! | CATTTTTTATGTTTTTAATT+TGG | - | chr6_3:75529592-75529611 | Msa0959160:CDS | 10.0% |
!! | TGATTATAAACTAATATTAA+TGG | - | chr6_3:75529962-75529981 | Msa0959160:intron | 10.0% |
!! | AATATAAAATAAACGTTAAT+AGG | + | chr6_3:75531982-75532001 | None:intergenic | 10.0% |
!!! | ATAATACAATTTTTTATTCA+TGG | + | chr6_3:75532917-75532936 | None:intergenic | 10.0% |
!! | TTTAAATAAATCACTAAATT+AGG | + | chr6_3:75534050-75534069 | None:intergenic | 10.0% |
!! | AATTTAGTGATTTATTTAAA+AGG | - | chr6_3:75534050-75534069 | Msa0959160:intron | 10.0% |
!! | TACTAAAACAAAATAAAATT+TGG | - | chr6_3:75536937-75536956 | Msa0959160:intron | 10.0% |
!!! | ATTTTAGTACATTTAATTAA+TGG | - | chr6_3:75537311-75537330 | Msa0959160:intron | 10.0% |
!! | TATATATTAGTTAACAAATA+TGG | - | chr6_3:75539229-75539248 | Msa0959160:CDS | 10.0% |
!!! | CACATATTTTAATTTTATTT+TGG | + | chr6_3:75539950-75539969 | None:intergenic | 10.0% |
!! | ACTTAAAAAAACAAAAAATT+GGG | + | chr6_3:75540964-75540983 | None:intergenic | 10.0% |
!!! | AATTTTTTGTTTTTTTAAGT+GGG | - | chr6_3:75540964-75540983 | Msa0959160:CDS | 10.0% |
!! | TGAGTATATATAAAATTATT+TGG | - | chr6_3:75541952-75541971 | Msa0959160:intron | 10.0% |
!! | GAGTATATATAAAATTATTT+GGG | - | chr6_3:75541953-75541972 | Msa0959160:intron | 10.0% |
!! | CTTATTAAATATTCTAATTT+GGG | + | chr6_3:75542260-75542279 | None:intergenic | 10.0% |
!! | ACTTATTAAATATTCTAATT+TGG | + | chr6_3:75542261-75542280 | None:intergenic | 10.0% |
!!! | TTGATTTTGTAATTTATATT+AGG | - | chr6_3:75542702-75542721 | Msa0959160:CDS | 10.0% |
!! | ATGAGTAAATAAATAGTATA+AGG | + | chr6_3:75529139-75529158 | None:intergenic | 15.0% |
!! | AATTGATAAACTAAAAAAGA+AGG | - | chr6_3:75529304-75529323 | Msa0959160:intron | 15.0% |
!! | TAATATGAATGTCTAAAAAA+TGG | - | chr6_3:75529725-75529744 | Msa0959160:intron | 15.0% |
!!! | ATTGTTGTTTAATATTATTG+TGG | - | chr6_3:75530124-75530143 | Msa0959160:intron | 15.0% |
!!! | ATACTTTTATATTTTGATGT+AGG | + | chr6_3:75530559-75530578 | None:intergenic | 15.0% |
!!! | TATTTTTTGTCTGTATATAT+AGG | - | chr6_3:75530621-75530640 | Msa0959160:intron | 15.0% |
!!! | ATTTCATTTTAAACTTTGTA+TGG | - | chr6_3:75531374-75531393 | Msa0959160:intron | 15.0% |
!!! | AAACATTTTTACATCATTTT+AGG | - | chr6_3:75531475-75531494 | Msa0959160:intron | 15.0% |
!! | TTGTAGAATTAATATTACAA+AGG | + | chr6_3:75531856-75531875 | None:intergenic | 15.0% |
!! | TTAACAACATTTAATTACAT+AGG | - | chr6_3:75531940-75531959 | Msa0959160:intron | 15.0% |
!!! | TTTAATTACATAGGTTTTTT+TGG | - | chr6_3:75531949-75531968 | Msa0959160:intron | 15.0% |
!! | AATTAATACTCAAATTTCTA+CGG | + | chr6_3:75532661-75532680 | None:intergenic | 15.0% |
!!! | TTTATATTTTACATTCATTG+TGG | - | chr6_3:75532828-75532847 | Msa0959160:intron | 15.0% |
!! | TTAAAATATTTAAGTGCTAT+TGG | + | chr6_3:75533075-75533094 | None:intergenic | 15.0% |
!! | GTAACAAATAAGAATAAAAA+TGG | + | chr6_3:75533196-75533215 | None:intergenic | 15.0% |
!!! | ATTTTATTGAAATTGACTAT+TGG | - | chr6_3:75533313-75533332 | Msa0959160:intron | 15.0% |
!! | TGATTAATTGAATAATTGAT+AGG | + | chr6_3:75533635-75533654 | None:intergenic | 15.0% |
!! | ATTGAAACATAAACTTAAAT+TGG | + | chr6_3:75534394-75534413 | None:intergenic | 15.0% |
!!! | CATATTTTTATATCATCATT+GGG | + | chr6_3:75535267-75535286 | None:intergenic | 15.0% |
!!! | TCATATTTTTATATCATCAT+TGG | + | chr6_3:75535268-75535287 | None:intergenic | 15.0% |
!!! | TTTCAAAATTTTGTTTTGAT+TGG | + | chr6_3:75536077-75536096 | None:intergenic | 15.0% |
!!! | TGTATTTTGACTATTTATTT+TGG | + | chr6_3:75536105-75536124 | None:intergenic | 15.0% |
!! | TAATATCCAACAAATAAATA+GGG | + | chr6_3:75536609-75536628 | None:intergenic | 15.0% |
!! | TTAATATCCAACAAATAAAT+AGG | + | chr6_3:75536610-75536629 | None:intergenic | 15.0% |
!!! | GAATTTTGATTATATTAAAG+TGG | + | chr6_3:75536838-75536857 | None:intergenic | 15.0% |
!!! | AATTCATATTCATATTTTTC+TGG | - | chr6_3:75536853-75536872 | Msa0959160:intron | 15.0% |
!!! | CTATTTTTTTATGCATTAAT+CGG | + | chr6_3:75537158-75537177 | None:intergenic | 15.0% |
!!! | ATATTTTCAATAAAAAGCAA+TGG | + | chr6_3:75537392-75537411 | None:intergenic | 15.0% |
!! | TTAACAATTGTAAATTTGTA+TGG | + | chr6_3:75537488-75537507 | None:intergenic | 15.0% |
!! | AGACTATTATATTTATATCT+TGG | - | chr6_3:75537711-75537730 | Msa0959160:intron | 15.0% |
!! | GACTATTATATTTATATCTT+GGG | - | chr6_3:75537712-75537731 | Msa0959160:intron | 15.0% |
!!! | TATTTTTTTTAGATCTTTCT+TGG | - | chr6_3:75537876-75537895 | Msa0959160:intron | 15.0% |
!!! | ATTTTTTTTAGATCTTTCTT+GGG | - | chr6_3:75537877-75537896 | Msa0959160:intron | 15.0% |
!! | ATTAAAAAAACACTAACATA+TGG | - | chr6_3:75537948-75537967 | Msa0959160:intron | 15.0% |
!! | GTAAAAAAAAAGTAAATAAG+TGG | + | chr6_3:75538977-75538996 | None:intergenic | 15.0% |
!! | AATAATTCACAATGAAAAAT+TGG | - | chr6_3:75539269-75539288 | Msa0959160:intron | 15.0% |
!! | ATAATTCACAATGAAAAATT+GGG | - | chr6_3:75539270-75539289 | Msa0959160:intron | 15.0% |
!!! | TCTATATTTTAACATAAAAG+GGG | + | chr6_3:75539631-75539650 | None:intergenic | 15.0% |
!!! | GTCTATATTTTAACATAAAA+GGG | + | chr6_3:75539632-75539651 | None:intergenic | 15.0% |
!!! | AGTCTATATTTTAACATAAA+AGG | + | chr6_3:75539633-75539652 | None:intergenic | 15.0% |
!! | TTGTTTCATATTTGATTATA+GGG | + | chr6_3:75539926-75539945 | None:intergenic | 15.0% |
!!! | ATATCCTATAATTAGTTTAA+AGG | + | chr6_3:75540515-75540534 | None:intergenic | 15.0% |
!! | CACTTAAAAAAACAAAAAAT+TGG | + | chr6_3:75540965-75540984 | None:intergenic | 15.0% |
!!! | CAATTTTTTGTTTTTTTAAG+TGG | - | chr6_3:75540963-75540982 | Msa0959160:CDS | 15.0% |
!!! | ATAATTCAAATTTTACATAG+TGG | - | chr6_3:75541403-75541422 | Msa0959160:CDS | 15.0% |
!! | ATAACATAAATTAAAGAGAT+GGG | + | chr6_3:75541571-75541590 | None:intergenic | 15.0% |
!! | AATAACATAAATTAAAGAGA+TGG | + | chr6_3:75541572-75541591 | None:intergenic | 15.0% |
!!! | ATTTTTTAAGAGTGTATATA+GGG | + | chr6_3:75541869-75541888 | None:intergenic | 15.0% |
!!! | AATTTTTTAAGAGTGTATAT+AGG | + | chr6_3:75541870-75541889 | None:intergenic | 15.0% |
!! | TATATACACTCTTAAAAAAT+TGG | - | chr6_3:75541869-75541888 | Msa0959160:intron | 15.0% |
!! | AAGACACTTAATTATTGTTA+TGG | + | chr6_3:75529212-75529231 | None:intergenic | 20.0% |
!!! | CTTTTTACTAAAAGATTTAC+AGG | + | chr6_3:75529765-75529784 | None:intergenic | 20.0% |
!! | AATATTAATGGTATACATGT+AGG | - | chr6_3:75529974-75529993 | Msa0959160:intron | 20.0% |
!! | ATACAGACAAAAAATAGTAT+AGG | + | chr6_3:75530617-75530636 | None:intergenic | 20.0% |
!!! | ATTGTTTTATCTCTAAAGTT+TGG | + | chr6_3:75530912-75530931 | None:intergenic | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | - | chr6_3:75531111-75531130 | Msa0959160:intron | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_3:75531115-75531134 | Msa0959160:intron | 20.0% |
!! | TGTAAAAAACTTATTATCCA+TGG | - | chr6_3:75531614-75531633 | Msa0959160:intron | 20.0% |
!! | AAGAAAAATGTATCATCATT+AGG | - | chr6_3:75531690-75531709 | Msa0959160:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAG+TGG | - | chr6_3:75531882-75531901 | Msa0959160:intron | 20.0% |
!! | ATTAATACTCAAATTTCTAC+GGG | + | chr6_3:75532660-75532679 | None:intergenic | 20.0% |
!! | AACAAAATAAATTACACATG+TGG | + | chr6_3:75532731-75532750 | None:intergenic | 20.0% |
!!! | AGTTTTCTATAATCTTCTTT+GGG | + | chr6_3:75533044-75533063 | None:intergenic | 20.0% |
!!! | TAGTTTTCTATAATCTTCTT+TGG | + | chr6_3:75533045-75533064 | None:intergenic | 20.0% |
!!! | TAGCACTTAAATATTTTAAG+AGG | - | chr6_3:75533076-75533095 | Msa0959160:intron | 20.0% |
!!! | TAGCTTTTTAAAAGATTTTC+CGG | - | chr6_3:75533273-75533292 | Msa0959160:intron | 20.0% |
!!! | TAATTTTGTTCATATAGGTT+TGG | + | chr6_3:75533461-75533480 | None:intergenic | 20.0% |
!!! | CATAGTAATTTTGTTCATAT+AGG | + | chr6_3:75533466-75533485 | None:intergenic | 20.0% |
!! | ATTAACTAATTCATTGAGTT+AGG | + | chr6_3:75533573-75533592 | None:intergenic | 20.0% |
!! | ATGTCATGTTTATTTATCTT+AGG | + | chr6_3:75534614-75534633 | None:intergenic | 20.0% |
!! | TAATATCCAACAATATAAAC+AGG | - | chr6_3:75534644-75534663 | Msa0959160:intron | 20.0% |
!! | AATATCCAACAATATAAACA+GGG | - | chr6_3:75534645-75534664 | Msa0959160:intron | 20.0% |
!!! | AAATTTACTTTTTACTTGTC+CGG | + | chr6_3:75534925-75534944 | None:intergenic | 20.0% |
!!! | TATTTAATTTCGAGGTTATA+AGG | - | chr6_3:75535058-75535077 | Msa0959160:intron | 20.0% |
!!! | ACGACAATATATTGTATTTT+TGG | - | chr6_3:75535091-75535110 | Msa0959160:intron | 20.0% |
!!! | CGACAATATATTGTATTTTT+GGG | - | chr6_3:75535092-75535111 | Msa0959160:intron | 20.0% |
!!! | TTTTGGGAAATTTTTACTAA+AGG | - | chr6_3:75535108-75535127 | Msa0959160:intron | 20.0% |
!!! | TTTGGGAAATTTTTACTAAA+GGG | - | chr6_3:75535109-75535128 | Msa0959160:intron | 20.0% |
!!! | TGTTTCTTACATTTAAGTTT+GGG | + | chr6_3:75535424-75535443 | None:intergenic | 20.0% |
!!! | ATGTTTCTTACATTTAAGTT+TGG | + | chr6_3:75535425-75535444 | None:intergenic | 20.0% |
!!! | TTCAATACTGAATTGATTTT+TGG | - | chr6_3:75535548-75535567 | Msa0959160:intron | 20.0% |
!! | AATATAGAATACAAGAGTTA+AGG | - | chr6_3:75536491-75536510 | Msa0959160:intron | 20.0% |
!! | ATATAGAATACAAGAGTTAA+GGG | - | chr6_3:75536492-75536511 | Msa0959160:intron | 20.0% |
!! | AATATCCAACAAATAAATAG+GGG | + | chr6_3:75536608-75536627 | None:intergenic | 20.0% |
!!! | TTGTAGATTTTAACATAAGA+GGG | + | chr6_3:75536727-75536746 | None:intergenic | 20.0% |
!!! | ATTGTAGATTTTAACATAAG+AGG | + | chr6_3:75536728-75536747 | None:intergenic | 20.0% |
!! | ATAAAAAAACTTATTAAGGG+AGG | + | chr6_3:75536753-75536772 | None:intergenic | 20.0% |
!! | CATCACTAAAATAATTGTAA+AGG | + | chr6_3:75537182-75537201 | None:intergenic | 20.0% |
!! | ATGCAAAATAAAGTTAACAA+GGG | - | chr6_3:75537334-75537353 | Msa0959160:intron | 20.0% |
!! | GCTAAGAATAAAAAAGATAT+TGG | + | chr6_3:75537675-75537694 | None:intergenic | 20.0% |
!!! | GTTAGTGTTTTTTTAATCTT+TGG | + | chr6_3:75537945-75537964 | None:intergenic | 20.0% |
!! | TTTCATTCAGATTACTAATA+TGG | - | chr6_3:75538316-75538335 | Msa0959160:intron | 20.0% |
!! | TTGTTACTGTAAATACTATT+GGG | - | chr6_3:75538625-75538644 | Msa0959160:intron | 20.0% |
!! | AGAGAAAAAAAACAATTTAG+AGG | - | chr6_3:75538905-75538924 | Msa0959160:intron | 20.0% |
!!! | GTTAATTTTACTTCATGATT+TGG | + | chr6_3:75539440-75539459 | None:intergenic | 20.0% |
!! | AATACTCCATTATTTAGTAA+AGG | + | chr6_3:75539511-75539530 | None:intergenic | 20.0% |
!! | TATTATATTTGAATGTTCCA+TGG | - | chr6_3:75539527-75539546 | Msa0959160:CDS | 20.0% |
!! | ATAATTCAAGTATCTTTGAT+GGG | + | chr6_3:75539596-75539615 | None:intergenic | 20.0% |
!! | TATAATTCAAGTATCTTTGA+TGG | + | chr6_3:75539597-75539616 | None:intergenic | 20.0% |
!!! | TAATATGTTTTGAATTTGAG+GGG | + | chr6_3:75539661-75539680 | None:intergenic | 20.0% |
!!! | CTAATATGTTTTGAATTTGA+GGG | + | chr6_3:75539662-75539681 | None:intergenic | 20.0% |
!!! | TCTAATATGTTTTGAATTTG+AGG | + | chr6_3:75539663-75539682 | None:intergenic | 20.0% |
!!! | TGTAGATTTTAACATAAAAG+GGG | + | chr6_3:75539734-75539753 | None:intergenic | 20.0% |
!!! | GTGTAGATTTTAACATAAAA+GGG | + | chr6_3:75539735-75539754 | None:intergenic | 20.0% |
!!! | AGTGTAGATTTTAACATAAA+AGG | + | chr6_3:75539736-75539755 | None:intergenic | 20.0% |
!!! | GTTGTTTCATATTTGATTAT+AGG | + | chr6_3:75539927-75539946 | None:intergenic | 20.0% |
!! | TAGTGCATATTTAGTTATTA+AGG | - | chr6_3:75540199-75540218 | Msa0959160:intron | 20.0% |
!! | AGTGCATATTTAGTTATTAA+GGG | - | chr6_3:75540200-75540219 | Msa0959160:intron | 20.0% |
!! | TGTAATTCAAACATCTTATA+AGG | - | chr6_3:75540230-75540249 | Msa0959160:intron | 20.0% |
!! | GTAATTCAAACATCTTATAA+GGG | - | chr6_3:75540231-75540250 | Msa0959160:intron | 20.0% |
!!! | TAAATTTTATTTTTCAAGGG+AGG | - | chr6_3:75540263-75540282 | Msa0959160:intron | 20.0% |
!!! | AAATTTTATTTTTCAAGGGA+GGG | - | chr6_3:75540264-75540283 | Msa0959160:intron | 20.0% |
!!! | AGTGTATATTTTAACATAAG+AGG | - | chr6_3:75540288-75540307 | Msa0959160:intron | 20.0% |
!!! | GTGTATATTTTAACATAAGA+GGG | - | chr6_3:75540289-75540308 | Msa0959160:intron | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | - | chr6_3:75540290-75540309 | Msa0959160:intron | 20.0% |
!! | TAATTTATTGCTTTAGTTGA+AGG | + | chr6_3:75540454-75540473 | None:intergenic | 20.0% |
!! | TTCTCCTTTAAACTAATTAT+AGG | - | chr6_3:75540508-75540527 | Msa0959160:intron | 20.0% |
!! | TTTAACTAGAAAAACATACT+TGG | + | chr6_3:75541364-75541383 | None:intergenic | 20.0% |
!!! | TATGAAATGATTTTTGATTC+AGG | - | chr6_3:75541730-75541749 | Msa0959160:intron | 20.0% |
!!! | AAAGATATTTTCATGAAGTT+TGG | + | chr6_3:75541783-75541802 | None:intergenic | 20.0% |
!! | ATTTCCAAATGTCATATATT+CGG | - | chr6_3:75542175-75542194 | Msa0959160:CDS | 20.0% |
!! | CATTTAACAATTGAGTTAAT+CGG | + | chr6_3:75542303-75542322 | None:intergenic | 20.0% |
! | AATGTAAGTAACTTGAATCT+GGG | + | chr6_3:75529114-75529133 | None:intergenic | 25.0% |
! | AAATGTAAGTAACTTGAATC+TGG | + | chr6_3:75529115-75529134 | None:intergenic | 25.0% |
!!! | TGTATGTTTTGAATACATAC+AGG | - | chr6_3:75529256-75529275 | Msa0959160:intron | 25.0% |
!! | AGACGAAATTAATCAAGTTT+TGG | - | chr6_3:75529421-75529440 | Msa0959160:CDS | 25.0% |
! | TACAAGAGTTATGTTCAAAA+TGG | - | chr6_3:75529452-75529471 | Msa0959160:CDS | 25.0% |
!! | TAAGTTGAGATATATATACC+AGG | + | chr6_3:75529557-75529576 | None:intergenic | 25.0% |
! | TTGAGTAAAACAAATTAGAG+TGG | - | chr6_3:75529623-75529642 | Msa0959160:CDS | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | - | chr6_3:75529696-75529715 | Msa0959160:intron | 25.0% |
! | GAGAATAATTCAAAGAAATG+AGG | + | chr6_3:75529901-75529920 | None:intergenic | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | + | chr6_3:75530455-75530474 | None:intergenic | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | + | chr6_3:75530456-75530475 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | - | chr6_3:75530456-75530475 | Msa0959160:CDS | 25.0% |
!! | TTTTTGTCTGTATATATAGG+TGG | - | chr6_3:75530624-75530643 | Msa0959160:intron | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | + | chr6_3:75530783-75530802 | None:intergenic | 25.0% |
!! | TGAATTAGAACTTTTTACTC+AGG | - | chr6_3:75530829-75530848 | Msa0959160:intron | 25.0% |
!! | TTCTTTTAACAATAGAGCAA+TGG | - | chr6_3:75531082-75531101 | Msa0959160:CDS | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | - | chr6_3:75531114-75531133 | Msa0959160:intron | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+GGG | + | chr6_3:75531260-75531279 | None:intergenic | 25.0% |
!!! | AACTCTTACTTCTTTTAAGA+AGG | + | chr6_3:75531261-75531280 | None:intergenic | 25.0% |
! | ATGAAATCTTTGTTCAATTG+TGG | + | chr6_3:75531361-75531380 | None:intergenic | 25.0% |
! | AAACTTTGTATGGTTATCAA+AGG | - | chr6_3:75531384-75531403 | Msa0959160:intron | 25.0% |
! | AACTTTGTATGGTTATCAAA+GGG | - | chr6_3:75531385-75531404 | Msa0959160:intron | 25.0% |
!! | TCATGAAGATACATTTTTCT+TGG | + | chr6_3:75531536-75531555 | None:intergenic | 25.0% |
!!! | TATCCATGGTTTTATTAACT+CGG | - | chr6_3:75531628-75531647 | Msa0959160:intron | 25.0% |
! | TGCAAAAAACTTATTATCCA+TGG | - | chr6_3:75531770-75531789 | Msa0959160:intron | 25.0% |
! | ACAAAATTATTCAAAGCACA+AGG | - | chr6_3:75532887-75532906 | Msa0959160:intron | 25.0% |
! | CAAAAAACATAATGTTTGCT+AGG | + | chr6_3:75533142-75533161 | None:intergenic | 25.0% |
!!! | TTGTTACTGTAGTTTTTTGT+TGG | - | chr6_3:75533209-75533228 | Msa0959160:intron | 25.0% |
!!! | TAGTTTTTTGTTGGTCAATA+TGG | - | chr6_3:75533218-75533237 | Msa0959160:intron | 25.0% |
!! | ATCAGTTTTTATCAAAACTC+CGG | + | chr6_3:75533295-75533314 | None:intergenic | 25.0% |
!!! | GTAATTTCATTCGTTTTTGT+GGG | - | chr6_3:75533716-75533735 | Msa0959160:intron | 25.0% |
! | TTTAGTCAAGATTTCTATCT+GGG | + | chr6_3:75533766-75533785 | None:intergenic | 25.0% |
! | ATTTAGTCAAGATTTCTATC+TGG | + | chr6_3:75533767-75533786 | None:intergenic | 25.0% |
! | TAAAAAGATTTAGTTACACC+TGG | + | chr6_3:75533931-75533950 | None:intergenic | 25.0% |
!! | AGGTGTAACTAAATCTTTTT+AGG | - | chr6_3:75533930-75533949 | Msa0959160:intron | 25.0% |
! | TATCCAACAAAAATAAACAG+AGG | + | chr6_3:75533974-75533993 | None:intergenic | 25.0% |
! | ATGTAACTGGTTAGTAATTA+GGG | - | chr6_3:75534172-75534191 | Msa0959160:intron | 25.0% |
! | ATATCCAACAATATAAACAG+GGG | - | chr6_3:75534646-75534665 | Msa0959160:intron | 25.0% |
! | CTACTTATCACTTTATTACT+TGG | - | chr6_3:75534846-75534865 | Msa0959160:intron | 25.0% |
! | ATCACTTTATTACTTGGTAA+AGG | - | chr6_3:75534852-75534871 | Msa0959160:intron | 25.0% |
! | TTATTACTTGGTAAAGGATT+TGG | - | chr6_3:75534858-75534877 | Msa0959160:intron | 25.0% |
!! | GTTTTCACATAAAAAATGCT+AGG | + | chr6_3:75535017-75535036 | None:intergenic | 25.0% |
!! | CACTAAGATATTTAATTTCG+AGG | - | chr6_3:75535050-75535069 | Msa0959160:intron | 25.0% |
! | GATTACTACATATTGTTCAT+AGG | + | chr6_3:75535198-75535217 | None:intergenic | 25.0% |
! | TTGTTTACGAAAACAGTTAA+AGG | + | chr6_3:75535244-75535263 | None:intergenic | 25.0% |
! | AGTTAAAACACCAAAATTGT+CGG | - | chr6_3:75535791-75535810 | Msa0959160:intron | 25.0% |
! | CAAAGTTAAACAATCTATTG+AGG | - | chr6_3:75535873-75535892 | Msa0959160:intron | 25.0% |
! | TTATTACTTGGTAAACGATT+TGG | + | chr6_3:75536395-75536414 | None:intergenic | 25.0% |
! | CTACTTATCACTTTATTACT+TGG | + | chr6_3:75534846-75534865 | None:intergenic | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | + | chr6_3:75536726-75536745 | None:intergenic | 25.0% |
!! | TAATAGGGTTTAAAACTAAG+AGG | + | chr6_3:75536901-75536920 | None:intergenic | 25.0% |
! | TTCATGCATATAATGTTAGT+TGG | - | chr6_3:75536961-75536980 | Msa0959160:intron | 25.0% |
! | TCATGCATATAATGTTAGTT+GGG | - | chr6_3:75536962-75536981 | Msa0959160:intron | 25.0% |
! | TAATGTTAGTTGGGTATATT+TGG | - | chr6_3:75536971-75536990 | Msa0959160:intron | 25.0% |
! | TAGTGATGTAGCAATTATTA+TGG | - | chr6_3:75537194-75537213 | Msa0959160:intron | 25.0% |
! | GATGCAAAATAAAGTTAACA+AGG | - | chr6_3:75537333-75537352 | Msa0959160:intron | 25.0% |
!! | TGAGAATATATATTCGCTTT+TGG | - | chr6_3:75537802-75537821 | Msa0959160:intron | 25.0% |
!!! | GAGAATATATATTCGCTTTT+GGG | - | chr6_3:75537803-75537822 | Msa0959160:intron | 25.0% |
! | TTTCTTGGGTAGAAAAATAA+TGG | - | chr6_3:75537891-75537910 | Msa0959160:intron | 25.0% |
! | CAGTAAAGAAAAATATGTCA+AGG | - | chr6_3:75538015-75538034 | Msa0959160:intron | 25.0% |
! | TAAGTATGTAAATAACAGCA+AGG | - | chr6_3:75538116-75538135 | Msa0959160:intron | 25.0% |
! | TTGTGTATTTCAGAATCATT+TGG | - | chr6_3:75538360-75538379 | Msa0959160:intron | 25.0% |
! | TTAAACTAAACTCTTCCTTA+TGG | - | chr6_3:75538471-75538490 | Msa0959160:intron | 25.0% |
! | TTATGGTTGAAATCAAAACA+GGG | - | chr6_3:75538488-75538507 | Msa0959160:intron | 25.0% |
! | GAGACAAAAAAAATTACAAG+TGG | + | chr6_3:75538571-75538590 | None:intergenic | 25.0% |
!!! | TTGTCTCTGTTTTTTTGTTT+TGG | - | chr6_3:75538584-75538603 | Msa0959160:intron | 25.0% |
! | CAATAGTATTTACAGTAACA+AGG | + | chr6_3:75538626-75538645 | None:intergenic | 25.0% |
! | CTTGTTACTGTAAATACTAT+TGG | - | chr6_3:75538624-75538643 | Msa0959160:intron | 25.0% |
! | GTTCACATTGTTCATTTAAT+TGG | - | chr6_3:75538797-75538816 | Msa0959160:intron | 25.0% |
! | ATTTACCCACAAATTTGTAA+AGG | - | chr6_3:75538839-75538858 | Msa0959160:intron | 25.0% |
! | ATCATCCTTTACAAATTTGT+GGG | + | chr6_3:75538847-75538866 | None:intergenic | 25.0% |
! | AAGATCTATTAATGAGCTTA+AGG | + | chr6_3:75538953-75538972 | None:intergenic | 25.0% |
! | TAATAACCAAAGTTGTGTAT+CGG | + | chr6_3:75539108-75539127 | None:intergenic | 25.0% |
! | TGAAGTAAAATTAACCAAGT+TGG | - | chr6_3:75539445-75539464 | Msa0959160:CDS | 25.0% |
! | TCTTGACCTTTACTAAATAA+TGG | - | chr6_3:75539502-75539521 | Msa0959160:CDS | 25.0% |
!!! | ATATTTTAACATAAAAGGGG+AGG | + | chr6_3:75539628-75539647 | None:intergenic | 25.0% |
! | TATTTAGTTATTAAGGGATG+AGG | - | chr6_3:75540206-75540225 | Msa0959160:intron | 25.0% |
!!! | AATTTTATTTTTCAAGGGAG+GGG | - | chr6_3:75540265-75540284 | Msa0959160:intron | 25.0% |
! | AAAACAAAGATCGATCTTAA+AGG | + | chr6_3:75540390-75540409 | None:intergenic | 25.0% |
! | ACACACTGATATATATTACT+AGG | - | chr6_3:75540746-75540765 | Msa0959160:intron | 25.0% |
! | AGAATGTTTGAAGAAAAACA+TGG | - | chr6_3:75540843-75540862 | Msa0959160:CDS | 25.0% |
!!! | TGTTTTTTTAAGTGGGTTAA+TGG | - | chr6_3:75540971-75540990 | Msa0959160:CDS | 25.0% |
!!! | GTTTTTTTAAGTGGGTTAAT+GGG | - | chr6_3:75540972-75540991 | Msa0959160:CDS | 25.0% |
! | CGTGATACTTTCTTTATATT+TGG | + | chr6_3:75541011-75541030 | None:intergenic | 25.0% |
! | CATATTCATCCATAATTTGA+AGG | - | chr6_3:75541248-75541267 | Msa0959160:CDS | 25.0% |
! | GAATGATTTGATATGTTTAG+AGG | - | chr6_3:75541275-75541294 | Msa0959160:CDS | 25.0% |
!! | NNNCAAACTTTTCAGAACAA+AGG | - | chr6_3:75541530-75541549 | Msa0959160:intron | 25.0% |
!!! | AAATGATTTTTGATTCAGGT+GGG | - | chr6_3:75541734-75541753 | Msa0959160:intron | 25.0% |
! | TCATGTTAATGGTATAACAA+AGG | - | chr6_3:75542127-75542146 | Msa0959160:CDS | 25.0% |
!! | TCATCATCATTTTCCAATTT+TGG | - | chr6_3:75542522-75542541 | Msa0959160:intron | 25.0% |
CATCAATCCTAATGAGAAAT+CGG | - | chr6_3:75528908-75528927 | Msa0959160:three_prime_UTR | 30.0% | |
!! | AATAGTGATTGAAGAGTACT+AGG | - | chr6_3:75529051-75529070 | Msa0959160:CDS | 30.0% |
! | TTTTGCTAAATGCAGTTCAT+AGG | - | chr6_3:75529181-75529200 | Msa0959160:CDS | 30.0% |
!!! | ATCAAGTTGACTTTTTCCAA+GGG | + | chr6_3:75529362-75529381 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+AGG | + | chr6_3:75529363-75529382 | None:intergenic | 30.0% |
! | ATTGACTCAATATGTCGTTT+GGG | - | chr6_3:75529380-75529399 | Msa0959160:intron | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | - | chr6_3:75529695-75529714 | Msa0959160:intron | 30.0% |
ATGTGAACATTACACAGATA+AGG | + | chr6_3:75529878-75529897 | None:intergenic | 30.0% | |
!! | TGTTTCTGAAGTACGAAAAA+GGG | + | chr6_3:75530016-75530035 | None:intergenic | 30.0% |
! | TTCCAAATTCCTTTTGATGT+AGG | + | chr6_3:75530510-75530529 | None:intergenic | 30.0% |
!!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_3:75530694-75530713 | Msa0959160:intron | 30.0% |
ATATTGGGGCTCAAAATATA+CGG | + | chr6_3:75530726-75530745 | None:intergenic | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | + | chr6_3:75530741-75530760 | None:intergenic | 30.0% | |
! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_3:75530742-75530761 | None:intergenic | 30.0% |
! | TTTTTACTCAGGCAATTGAA+AGG | - | chr6_3:75530840-75530859 | Msa0959160:intron | 30.0% |
AATTTACCCATCTTCAATCT+TGG | - | chr6_3:75530994-75531013 | Msa0959160:CDS | 30.0% | |
! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_3:75531175-75531194 | Msa0959160:intron | 30.0% |
!! | CTCTTACTTCTTTTAAGAAG+GGG | + | chr6_3:75531259-75531278 | None:intergenic | 30.0% |
! | AAAGTATCACCATAATGACT+TGG | - | chr6_3:75531510-75531529 | Msa0959160:intron | 30.0% |
TAACTATATACCAACAACAG+AGG | - | chr6_3:75532067-75532086 | Msa0959160:intron | 30.0% | |
CACATATCAACAATATCAAG+TGG | - | chr6_3:75532098-75532117 | Msa0959160:intron | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | - | chr6_3:75532407-75532426 | Msa0959160:intron | 30.0% | |
TGAGGGAATATGATTTGAAT+AGG | - | chr6_3:75532424-75532443 | Msa0959160:intron | 30.0% | |
GAGGGAATATGATTTGAATA+GGG | - | chr6_3:75532425-75532444 | Msa0959160:intron | 30.0% | |
! | TTTCTTTTGGCATTCTTGAA+TGG | + | chr6_3:75532457-75532476 | None:intergenic | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | + | chr6_3:75532470-75532489 | None:intergenic | 30.0% |
AAAAGAAAATTGACAACGCT+TGG | - | chr6_3:75532469-75532488 | Msa0959160:intron | 30.0% | |
!! | ATGCATATGAGTTTTGATGA+AGG | - | chr6_3:75532789-75532808 | Msa0959160:intron | 30.0% |
!! | TTGCTTTCTTACTTGTTGTA+GGG | + | chr6_3:75532981-75533000 | None:intergenic | 30.0% |
! | TCCAATTTCTCTTGTAGTTT+TGG | + | chr6_3:75533107-75533126 | None:intergenic | 30.0% |
!!! | GCAAACATTATGTTTTTTGC+TGG | - | chr6_3:75533143-75533162 | Msa0959160:intron | 30.0% |
!!! | AACATTATGTTTTTTGCTGG+CGG | - | chr6_3:75533146-75533165 | Msa0959160:intron | 30.0% |
!! | CGTAATTTCATTCGTTTTTG+TGG | - | chr6_3:75533715-75533734 | Msa0959160:intron | 30.0% |
TGAACTAGAAATTCTGTATG+AGG | + | chr6_3:75533799-75533818 | None:intergenic | 30.0% | |
!! | GAATTTCTAGTTCAAAACTG+TGG | - | chr6_3:75533805-75533824 | Msa0959160:intron | 30.0% |
!! | GTAATTTGTTCTTAGTTACC+AGG | - | chr6_3:75533910-75533929 | Msa0959160:intron | 30.0% |
!!! | GAACCTCTGTTTATTTTTGT+TGG | - | chr6_3:75533968-75533987 | Msa0959160:intron | 30.0% |
TAACCCTAGATTATGTACTT+AGG | - | chr6_3:75534077-75534096 | Msa0959160:intron | 30.0% | |
CAACCTAAGTACATAATCTA+GGG | + | chr6_3:75534083-75534102 | None:intergenic | 30.0% | |
ACAACCTAAGTACATAATCT+AGG | + | chr6_3:75534084-75534103 | None:intergenic | 30.0% | |
CTCTTAAGTACTTAGTACTA+GGG | + | chr6_3:75534110-75534129 | None:intergenic | 30.0% | |
GATGTAACTGGTTAGTAATT+AGG | - | chr6_3:75534171-75534190 | Msa0959160:intron | 30.0% | |
! | CTCTTAGTATTTCTACAAAC+GGG | + | chr6_3:75534278-75534297 | None:intergenic | 30.0% |
! | GCTCTTAGTATTTCTACAAA+CGG | + | chr6_3:75534279-75534298 | None:intergenic | 30.0% |
! | AAATACTAAGAGCGTAGATA+GGG | - | chr6_3:75534286-75534305 | Msa0959160:intron | 30.0% |
AGACTATACAAGTGATAAGA+CGG | + | chr6_3:75534590-75534609 | None:intergenic | 30.0% | |
TATCCAACAATATAAACAGG+GGG | - | chr6_3:75534647-75534666 | Msa0959160:intron | 30.0% | |
!! | TTACTTTTCTGCAACCAAAA+CGG | - | chr6_3:75534693-75534712 | Msa0959160:intron | 30.0% |
GTTGACGCTATAAAAGTTAA+GGG | + | chr6_3:75534765-75534784 | None:intergenic | 30.0% | |
AGTTGACGCTATAAAAGTTA+AGG | + | chr6_3:75534766-75534785 | None:intergenic | 30.0% | |
! | TGTTAGGTATGATTGATAGT+CGG | + | chr6_3:75534898-75534917 | None:intergenic | 30.0% |
GCTATCATCTTGTTAAACTT+AGG | - | chr6_3:75534984-75535003 | Msa0959160:intron | 30.0% | |
TTAATTTCGAGGTTATAAGG+AGG | - | chr6_3:75535061-75535080 | Msa0959160:intron | 30.0% | |
TGGGTAAACAATGAATAATC+AGG | - | chr6_3:75535488-75535507 | Msa0959160:intron | 30.0% | |
GGGTAAACAATGAATAATCA+GGG | - | chr6_3:75535489-75535508 | Msa0959160:intron | 30.0% | |
TATGAACTGTCAAATTCACT+AGG | + | chr6_3:75535609-75535628 | None:intergenic | 30.0% | |
! | TGATGCAGATTTTATCGTTA+TGG | - | chr6_3:75535631-75535650 | Msa0959160:intron | 30.0% |
! | ATTTTATCGTTATGGCTCAA+AGG | - | chr6_3:75535639-75535658 | Msa0959160:intron | 30.0% |
! | TTTTATCGTTATGGCTCAAA+GGG | - | chr6_3:75535640-75535659 | Msa0959160:intron | 30.0% |
TCAAATACTCACTTTCTCAT+AGG | - | chr6_3:75535667-75535686 | Msa0959160:intron | 30.0% | |
CAAATACTCACTTTCTCATA+GGG | - | chr6_3:75535668-75535687 | Msa0959160:intron | 30.0% | |
!! | TTAAGTTGAATCCTGCTATT+TGG | + | chr6_3:75535763-75535782 | None:intergenic | 30.0% |
TTTCACTTACACTATATGCA+TGG | + | chr6_3:75535820-75535839 | None:intergenic | 30.0% | |
GTGAAAATGTATCTCACATT+TGG | - | chr6_3:75535834-75535853 | Msa0959160:intron | 30.0% | |
!! | TTTTGATGATTGCAAAGTCA+AGG | + | chr6_3:75535977-75535996 | None:intergenic | 30.0% |
TTAAATCGTCAACAAATGCA+TGG | + | chr6_3:75536012-75536031 | None:intergenic | 30.0% | |
! | CATCAAATATCAGAGGTTTT+TGG | + | chr6_3:75536035-75536054 | None:intergenic | 30.0% |
ATACAATATCACCATAATGC+TGG | - | chr6_3:75536120-75536139 | Msa0959160:intron | 30.0% | |
TACAATATCACCATAATGCT+GGG | - | chr6_3:75536121-75536140 | Msa0959160:intron | 30.0% | |
CATGGAAATTATGTAGAACA+GGG | + | chr6_3:75536186-75536205 | None:intergenic | 30.0% | |
! | ACAGAACAAGTTACCTATTT+TGG | - | chr6_3:75536544-75536563 | Msa0959160:intron | 30.0% |
! | TACTTTTCTGCAACCAAAAT+AGG | + | chr6_3:75536560-75536579 | None:intergenic | 30.0% |
AATCTCCCCTATTTATTTGT+TGG | - | chr6_3:75536600-75536619 | Msa0959160:intron | 30.0% | |
TATACAAGTGATGATTCTGT+TGG | - | chr6_3:75536667-75536686 | Msa0959160:intron | 30.0% | |
ATACAAGTGATGATTCTGTT+GGG | - | chr6_3:75536668-75536687 | Msa0959160:intron | 30.0% | |
TCCGAAGAAAATTAGTATTG+TGG | - | chr6_3:75536810-75536829 | Msa0959160:intron | 30.0% | |
! | CCCACAATACTAATTTTCTT+CGG | + | chr6_3:75536814-75536833 | None:intergenic | 30.0% |
CCGAAGAAAATTAGTATTGT+GGG | - | chr6_3:75536811-75536830 | Msa0959160:intron | 30.0% | |
TTTAACAATGTTGCATTCCT+AGG | + | chr6_3:75537054-75537073 | None:intergenic | 30.0% | |
AAATCATAGAACTCGACTTT+AGG | + | chr6_3:75537574-75537593 | None:intergenic | 30.0% | |
CATTCAATTAATGCGTCTTT+AGG | + | chr6_3:75538090-75538109 | None:intergenic | 30.0% | |
CATTCAGATTACTAATATGG+CGG | - | chr6_3:75538319-75538338 | Msa0959160:intron | 30.0% | |
ATTCAGATTACTAATATGGC+GGG | - | chr6_3:75538320-75538339 | Msa0959160:intron | 30.0% | |
! | AAATACACAAGAGTTGATCT+AGG | + | chr6_3:75538350-75538369 | None:intergenic | 30.0% |
! | TAGTTTAACCTTTGCCATTT+AGG | + | chr6_3:75538459-75538478 | None:intergenic | 30.0% |
!!! | CTGTTTTGATTTCAACCATA+AGG | + | chr6_3:75538489-75538508 | None:intergenic | 30.0% |
CTTATGGTTGAAATCAAAAC+AGG | - | chr6_3:75538487-75538506 | Msa0959160:intron | 30.0% | |
!!! | TCTCTGTTTTTTTGTTTTGG+TGG | - | chr6_3:75538587-75538606 | Msa0959160:intron | 30.0% |
TTACTGTAAATACTATTGGG+TGG | - | chr6_3:75538628-75538647 | Msa0959160:intron | 30.0% | |
GATCATCCTTTACAAATTTG+TGG | + | chr6_3:75538848-75538867 | None:intergenic | 30.0% | |
ACAATTTAGAGGAATGAGTT+CGG | - | chr6_3:75538916-75538935 | Msa0959160:intron | 30.0% | |
!! | TTGGGTCATGTATTTTGAAA+CGG | - | chr6_3:75539288-75539307 | Msa0959160:intron | 30.0% |
TGGTAAAATTTCTACCAACT+TGG | + | chr6_3:75539462-75539481 | None:intergenic | 30.0% | |
TACCAAGCAAATTAACCAAA+TGG | - | chr6_3:75539477-75539496 | Msa0959160:CDS | 30.0% | |
ATTGCTTTAGTAAGTTTCCA+TGG | + | chr6_3:75539547-75539566 | None:intergenic | 30.0% | |
TCTAATTCAAGCTTCTCTTA+GGG | + | chr6_3:75539704-75539723 | None:intergenic | 30.0% | |
ATCTAATTCAAGCTTCTCTT+AGG | + | chr6_3:75539705-75539724 | None:intergenic | 30.0% | |
!! | ATTTTAACATAAAAGGGGAG+GGG | + | chr6_3:75539626-75539645 | None:intergenic | 30.0% |
!! | GATTTTAACATAAAAGGGGA+GGG | + | chr6_3:75539730-75539749 | None:intergenic | 30.0% |
!! | AGATTTTAACATAAAAGGGG+AGG | + | chr6_3:75539731-75539750 | None:intergenic | 30.0% |
ATTCAAACATCTTATAAGGG+AGG | - | chr6_3:75540234-75540253 | Msa0959160:intron | 30.0% | |
!!! | ATATTTTAACATAAGAGGGG+AGG | - | chr6_3:75540293-75540312 | Msa0959160:intron | 30.0% |
!!! | TATTTTAACATAAGAGGGGA+GGG | - | chr6_3:75540294-75540313 | Msa0959160:intron | 30.0% |
TGTAATTCAAGCTTCTCTTA+AGG | - | chr6_3:75540320-75540339 | Msa0959160:intron | 30.0% | |
TGCTTTAGTTGAAGGAAAAA+AGG | + | chr6_3:75540446-75540465 | None:intergenic | 30.0% | |
! | AGTGTTCAATGTCAAACTTT+TGG | + | chr6_3:75540541-75540560 | None:intergenic | 30.0% |
ACTCACAAAATCAATAGGAT+TGG | + | chr6_3:75540618-75540637 | None:intergenic | 30.0% | |
ACAAACCTGCATTTACATAA+TGG | + | chr6_3:75540694-75540713 | None:intergenic | 30.0% | |
!! | ATATAAAGAAAGTATCACGC+CGG | - | chr6_3:75541012-75541031 | Msa0959160:intron | 30.0% |
TAGTTGTGATGCTTTGTAAA+GGG | + | chr6_3:75541061-75541080 | None:intergenic | 30.0% | |
TTAGTTGTGATGCTTTGTAA+AGG | + | chr6_3:75541062-75541081 | None:intergenic | 30.0% | |
GAAGATCATCTTAATGATGT+AGG | - | chr6_3:75541099-75541118 | Msa0959160:intron | 30.0% | |
! | TTATGGCTTGTCAAGATTTA+TGG | - | chr6_3:75541218-75541237 | Msa0959160:CDS | 30.0% |
TATTCACAGATGCTATTAAC+AGG | - | chr6_3:75541638-75541657 | Msa0959160:intron | 30.0% | |
!! | GAAATGATTTTTGATTCAGG+TGG | - | chr6_3:75541733-75541752 | Msa0959160:intron | 30.0% |
! | TACCAATAATTTTGCTGAAG+AGG | - | chr6_3:75541821-75541840 | Msa0959160:intron | 30.0% |
GAAGAGGACTATCAAAAATA+TGG | - | chr6_3:75541837-75541856 | Msa0959160:intron | 30.0% | |
AAATTATTTGGGTGAAACAG+TGG | - | chr6_3:75541964-75541983 | Msa0959160:intron | 30.0% | |
AAAGGAGACAATTGATATCT+TGG | - | chr6_3:75542145-75542164 | Msa0959160:CDS | 30.0% | |
! | GTCAAGTCATTGATTAATGT+TGG | - | chr6_3:75542621-75542640 | Msa0959160:intron | 30.0% |
! | TCATTGATTAATGTTGGTGT+TGG | - | chr6_3:75542627-75542646 | Msa0959160:intron | 30.0% |
! | TGCAAAACCGATTTCTCATT+AGG | + | chr6_3:75528918-75528937 | None:intergenic | 35.0% |
TCCTTATGCTTCAGAATCTA+CGG | - | chr6_3:75528986-75529005 | Msa0959160:CDS | 35.0% | |
GAATCTGGGCTAATATTAAG+TGG | + | chr6_3:75529100-75529119 | None:intergenic | 35.0% | |
! | GATTGACTCAATATGTCGTT+TGG | - | chr6_3:75529379-75529398 | Msa0959160:intron | 35.0% |
!! | ATTCTCTTGCTGTGCTATTT+AGG | - | chr6_3:75529501-75529520 | Msa0959160:CDS | 35.0% |
!! | TTCTCTTGCTGTGCTATTTA+GGG | - | chr6_3:75529502-75529521 | Msa0959160:CDS | 35.0% |
AAAGATTTACAGGCTAACAG+TGG | + | chr6_3:75529755-75529774 | None:intergenic | 35.0% | |
!! | GTGTTTCTGAAGTACGAAAA+AGG | + | chr6_3:75530017-75530036 | None:intergenic | 35.0% |
AGATGTGTTCAACCAATTCA+AGG | - | chr6_3:75530165-75530184 | Msa0959160:intron | 35.0% | |
GGTTCATGGTGAAGAAATAT+TGG | - | chr6_3:75530267-75530286 | Msa0959160:intron | 35.0% | |
TGGTGAAGAAATATTGGAAG+AGG | - | chr6_3:75530273-75530292 | Msa0959160:intron | 35.0% | |
TTTACTTGTGTTGCAAGAGA+AGG | + | chr6_3:75530349-75530368 | None:intergenic | 35.0% | |
! | TCTACTTGCATTGGCAAAAT+TGG | - | chr6_3:75530465-75530484 | Msa0959160:CDS | 35.0% |
! | ATTCCTTTTGATGTAGGCTT+TGG | + | chr6_3:75530504-75530523 | None:intergenic | 35.0% |
AGCCTACATCAAAAGGAATT+TGG | - | chr6_3:75530505-75530524 | Msa0959160:intron | 35.0% | |
TTGTCTGTATATATAGGTGG+TGG | - | chr6_3:75530627-75530646 | Msa0959160:intron | 35.0% | |
!!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_3:75530693-75530712 | Msa0959160:intron | 35.0% |
TTCCTTGCTTGAGAATATTG+GGG | + | chr6_3:75530740-75530759 | None:intergenic | 35.0% | |
GATGACACATATGATGCATA+TGG | - | chr6_3:75530797-75530816 | Msa0959160:intron | 35.0% | |
! | CTAGTCATCAAGTTTAGAGT+TGG | - | chr6_3:75530950-75530969 | Msa0959160:CDS | 35.0% |
TAGCAACCAAGATTGAAGAT+GGG | + | chr6_3:75531003-75531022 | None:intergenic | 35.0% | |
TTAGCAACCAAGATTGAAGA+TGG | + | chr6_3:75531004-75531023 | None:intergenic | 35.0% | |
TAGGTGGGATATTAATTGCT+TGG | - | chr6_3:75531130-75531149 | Msa0959160:intron | 35.0% | |
TAAAGCAACTTCGTGTAATC+CGG | + | chr6_3:75531164-75531183 | None:intergenic | 35.0% | |
GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_3:75531215-75531234 | Msa0959160:intron | 35.0% | |
!! | TTCTTTTAAGAAGGGGTCAA+GGG | + | chr6_3:75531252-75531271 | None:intergenic | 35.0% |
TGGTTATCAAAGGGAAGTTT+AGG | - | chr6_3:75531394-75531413 | Msa0959160:intron | 35.0% | |
! | TTTTCTTGGCCAAGTCATTA+TGG | + | chr6_3:75531522-75531541 | None:intergenic | 35.0% |
GAACCGAGTTAATAAAACCA+TGG | + | chr6_3:75531634-75531653 | None:intergenic | 35.0% | |
GAACTGAGTTCATATAACCA+TGG | + | chr6_3:75531790-75531809 | None:intergenic | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | - | chr6_3:75532028-75532047 | Msa0959160:intron | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | - | chr6_3:75532136-75532155 | Msa0959160:intron | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | - | chr6_3:75532137-75532156 | Msa0959160:intron | 35.0% | |
GACAAAAGACATCTTTGACT+GGG | - | chr6_3:75532169-75532188 | Msa0959160:intron | 35.0% | |
! | GCAGCAGCATTAACAATTTT+TGG | + | chr6_3:75532206-75532225 | None:intergenic | 35.0% |
TGCTATACATTGTAGGCTTA+GGG | - | chr6_3:75532223-75532242 | Msa0959160:intron | 35.0% | |
AAACAGTTTGAGCAGAAAAG+AGG | - | chr6_3:75532372-75532391 | Msa0959160:intron | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | - | chr6_3:75532406-75532425 | Msa0959160:intron | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | - | chr6_3:75532485-75532504 | Msa0959160:intron | 35.0% | |
ACACACGTAAGAATAGGTAA+CGG | + | chr6_3:75532534-75532553 | None:intergenic | 35.0% | |
TTGAGAACACACGTAAGAAT+AGG | + | chr6_3:75532540-75532559 | None:intergenic | 35.0% | |
!! | CTTGCTTTCTTACTTGTTGT+AGG | + | chr6_3:75532982-75533001 | None:intergenic | 35.0% |
GCCAAAACTACAAGAGAAAT+TGG | - | chr6_3:75533103-75533122 | Msa0959160:intron | 35.0% | |
! | ACATAATGTTTGCTAGGTTC+TGG | + | chr6_3:75533136-75533155 | None:intergenic | 35.0% |
TAGATAGTTACCAAGCTAGA+GGG | - | chr6_3:75533242-75533261 | Msa0959160:intron | 35.0% | |
CAAGATTTCTATCTGGGTTT+GGG | + | chr6_3:75533760-75533779 | None:intergenic | 35.0% | |
TCAAGATTTCTATCTGGGTT+TGG | + | chr6_3:75533761-75533780 | None:intergenic | 35.0% | |
CTAGAAATTCTGTATGAGGA+AGG | + | chr6_3:75533795-75533814 | None:intergenic | 35.0% | |
CCTCTTAAGTACTTAGTACT+AGG | + | chr6_3:75534111-75534130 | None:intergenic | 35.0% | |
CCTAGTACTAAGTACTTAAG+AGG | - | chr6_3:75534108-75534127 | Msa0959160:intron | 35.0% | |
TTACTAACCAGTTACATCCT+AGG | + | chr6_3:75534169-75534188 | None:intergenic | 35.0% | |
TTCGATAAAGGTTTATTCCC+CGG | + | chr6_3:75534210-75534229 | None:intergenic | 35.0% | |
TCAAGAGAATGGTTCGATAA+AGG | + | chr6_3:75534222-75534241 | None:intergenic | 35.0% | |
TACTAAGGCTTTCAAGAGAA+TGG | + | chr6_3:75534233-75534252 | None:intergenic | 35.0% | |
TTCTCTTGAAAGCCTTAGTA+AGG | - | chr6_3:75534233-75534252 | Msa0959160:intron | 35.0% | |
AATCTACGTCTACCTTACTA+AGG | + | chr6_3:75534248-75534267 | None:intergenic | 35.0% | |
! | GAAATACTAAGAGCGTAGAT+AGG | - | chr6_3:75534285-75534304 | Msa0959160:intron | 35.0% |
AGTGTCCTAAGATTCATAGA+TGG | - | chr6_3:75534318-75534337 | Msa0959160:intron | 35.0% | |
GTGTCCTAAGATTCATAGAT+GGG | - | chr6_3:75534319-75534338 | Msa0959160:intron | 35.0% | |
TTAATAAAACCGCACACGTA+CGG | - | chr6_3:75534424-75534443 | Msa0959160:intron | 35.0% | |
TATACTATCTCGGTTGATCT+AGG | + | chr6_3:75534495-75534514 | None:intergenic | 35.0% | |
TACAAGTGATAAGACGGTTA+GGG | + | chr6_3:75534584-75534603 | None:intergenic | 35.0% | |
ATACAAGTGATAAGACGGTT+AGG | + | chr6_3:75534585-75534604 | None:intergenic | 35.0% | |
ATCCAACAATATAAACAGGG+GGG | - | chr6_3:75534648-75534667 | Msa0959160:intron | 35.0% | |
! | AAACTTGCTCTGTTGCAAAT+AGG | - | chr6_3:75534718-75534737 | Msa0959160:intron | 35.0% |
AATAAGTAACGCGAGTTGTT+TGG | - | chr6_3:75534792-75534811 | Msa0959160:intron | 35.0% | |
AGTAGATTATCGTATCCACA+AGG | + | chr6_3:75534831-75534850 | None:intergenic | 35.0% | |
CAATCATACCTAACACAATC+CGG | - | chr6_3:75534903-75534922 | Msa0959160:intron | 35.0% | |
ACAAGATGATAGCACATTGT+TGG | + | chr6_3:75534977-75534996 | None:intergenic | 35.0% | |
! | TAAGTTTGGGACATAGTGTA+AGG | + | chr6_3:75535411-75535430 | None:intergenic | 35.0% |
TTTATCGTTATGGCTCAAAG+GGG | - | chr6_3:75535641-75535660 | Msa0959160:intron | 35.0% | |
AAACATACCAACCAAATAGC+AGG | - | chr6_3:75535749-75535768 | Msa0959160:intron | 35.0% | |
AAATGTATCTCACATTTGGC+TGG | - | chr6_3:75535838-75535857 | Msa0959160:intron | 35.0% | |
TTGAGGAGCAATGAATGAAA+TGG | - | chr6_3:75535890-75535909 | Msa0959160:intron | 35.0% | |
! | AACAAATGCATGGTGATGAT+TGG | + | chr6_3:75536002-75536021 | None:intergenic | 35.0% |
! | TGCAAAGCATCAAATATCAG+AGG | + | chr6_3:75536042-75536061 | None:intergenic | 35.0% |
AAATTATGTAGAACAGGGTG+TGG | + | chr6_3:75536181-75536200 | None:intergenic | 35.0% | |
GCATGGAAATTATGTAGAAC+AGG | + | chr6_3:75536187-75536206 | None:intergenic | 35.0% | |
! | ACACCCTGAACTTCTTATTT+CGG | - | chr6_3:75536292-75536311 | Msa0959160:intron | 35.0% |
AGAAGTAACGACAAATCATG+TGG | + | chr6_3:75536440-75536459 | None:intergenic | 35.0% | |
!! | AGATTTTAACATAAGAGGGG+AGG | + | chr6_3:75536723-75536742 | None:intergenic | 35.0% |
!! | AAGAGTTTTGTCAATCACTG+TGG | - | chr6_3:75537083-75537102 | Msa0959160:intron | 35.0% |
ATAGAGACTAATCCATCGAA+CGG | + | chr6_3:75537116-75537135 | None:intergenic | 35.0% | |
TCTCTATTGTTGCACGTAAA+GGG | - | chr6_3:75537129-75537148 | Msa0959160:intron | 35.0% | |
AACATGTGCAAACTTGTACA+TGG | - | chr6_3:75537530-75537549 | Msa0959160:intron | 35.0% | |
!! | TATATTCGCTTTTGGGTACA+AGG | - | chr6_3:75537810-75537829 | Msa0959160:intron | 35.0% |
!! | ATATTCGCTTTTGGGTACAA+GGG | - | chr6_3:75537811-75537830 | Msa0959160:intron | 35.0% |
AGACGCATTAATTGAATGTG+AGG | - | chr6_3:75538092-75538111 | Msa0959160:intron | 35.0% | |
GACGCATTAATTGAATGTGA+GGG | - | chr6_3:75538093-75538112 | Msa0959160:intron | 35.0% | |
GTGACATATTTACCTCTCTT+TGG | - | chr6_3:75538234-75538253 | Msa0959160:intron | 35.0% | |
TTCAGATTACTAATATGGCG+GGG | - | chr6_3:75538321-75538340 | Msa0959160:intron | 35.0% | |
!! | AAGCCACATTTTGGAAAACA+CGG | + | chr6_3:75538424-75538443 | None:intergenic | 35.0% |
! | AAGTATCAGAAGCCACATTT+TGG | + | chr6_3:75538433-75538452 | None:intergenic | 35.0% |
TTCTGATACTTCCACCTAAA+TGG | - | chr6_3:75538442-75538461 | Msa0959160:intron | 35.0% | |
! | TTTAACCTTTGCCATTTAGG+TGG | + | chr6_3:75538456-75538475 | None:intergenic | 35.0% |
TTAGCTACAGTTATCATGAC+TGG | - | chr6_3:75538516-75538535 | Msa0959160:intron | 35.0% | |
TGGATACTCATACAAAGAAG+GGG | + | chr6_3:75538551-75538570 | None:intergenic | 35.0% | |
GTGGATACTCATACAAAGAA+GGG | + | chr6_3:75538552-75538571 | None:intergenic | 35.0% | |
AGTGGATACTCATACAAAGA+AGG | + | chr6_3:75538553-75538572 | None:intergenic | 35.0% | |
CAATTTAGAGGAATGAGTTC+GGG | - | chr6_3:75538917-75538936 | Msa0959160:intron | 35.0% | |
!! | TTGCGACATGTATTTTGGAA+CGG | + | chr6_3:75539068-75539087 | None:intergenic | 35.0% |
! | GTTGATTGCGACATGTATTT+TGG | + | chr6_3:75539073-75539092 | None:intergenic | 35.0% |
ATATTGTGTGTGTCTCAAGT+TGG | - | chr6_3:75539381-75539400 | Msa0959160:CDS | 35.0% | |
!! | AGCCATTTGGTTAATTTGCT+TGG | + | chr6_3:75539482-75539501 | None:intergenic | 35.0% |
TTCAAGTATCTTTGATGGGA+GGG | + | chr6_3:75539592-75539611 | None:intergenic | 35.0% | |
ATTCAAGTATCTTTGATGGG+AGG | + | chr6_3:75539593-75539612 | None:intergenic | 35.0% | |
CTAATTCAAGCTTCTCTTAG+GGG | + | chr6_3:75539703-75539722 | None:intergenic | 35.0% | |
!! | ATTTTAACATAAGAGGGGAG+GGG | - | chr6_3:75540295-75540314 | Msa0959160:intron | 35.0% |
AATTCAAGCTTCTCTTAAGG+AGG | - | chr6_3:75540323-75540342 | Msa0959160:intron | 35.0% | |
ATTCAAGCTTCTCTTAAGGA+GGG | - | chr6_3:75540324-75540343 | Msa0959160:intron | 35.0% | |
!!! | AAGATCGATCTTTGTTTTCG+TGG | - | chr6_3:75540392-75540411 | Msa0959160:CDS | 35.0% |
TGGCTACTCACAAAATCAAT+AGG | + | chr6_3:75540623-75540642 | None:intergenic | 35.0% | |
GTTTGAAGAAAAACATGGTG+AGG | - | chr6_3:75540848-75540867 | Msa0959160:CDS | 35.0% | |
!! | TATAAAGAAAGTATCACGCC+GGG | - | chr6_3:75541013-75541032 | Msa0959160:intron | 35.0% |
CTTTGTAAAGGGCAATGAAA+GGG | + | chr6_3:75541050-75541069 | None:intergenic | 35.0% | |
!! | GCATCACAACTAAGTATTGA+AGG | - | chr6_3:75541069-75541088 | Msa0959160:intron | 35.0% |
CTTCAGAATCCACTTCATTA+TGG | - | chr6_3:75541201-75541220 | Msa0959160:CDS | 35.0% | |
CATTCTCAGCCTTCAAATTA+TGG | + | chr6_3:75541260-75541279 | None:intergenic | 35.0% | |
GTTCATGAATCTAACTATGC+TGG | + | chr6_3:75541319-75541338 | None:intergenic | 35.0% | |
AACATACTTGGAAACTTCAG+TGG | + | chr6_3:75541352-75541371 | None:intergenic | 35.0% | |
! | GACATTTTCGATGTTCATCA+CGG | - | chr6_3:75541595-75541614 | Msa0959160:intron | 35.0% |
! | ACATTTTCGATGTTCATCAC+GGG | - | chr6_3:75541596-75541615 | Msa0959160:intron | 35.0% |
GTCCTCTTCAGCAAAATTAT+TGG | + | chr6_3:75541826-75541845 | None:intergenic | 35.0% | |
GCAGAAGATTACTTGAACAA+TGG | - | chr6_3:75542050-75542069 | Msa0959160:intron | 35.0% | |
! | AACAATGGAATTTTGAGCAC+TGG | - | chr6_3:75542065-75542084 | Msa0959160:intron | 35.0% |
TTCCTGTTGGATCATGTTAA+TGG | - | chr6_3:75542116-75542135 | Msa0959160:CDS | 35.0% | |
TACCATTAACATGATCCAAC+AGG | + | chr6_3:75542121-75542140 | None:intergenic | 35.0% | |
TCCAAATGTCATATATTCGG+TGG | - | chr6_3:75542178-75542197 | Msa0959160:CDS | 35.0% | |
TGATGATTTAGAAGGAGCTA+AGG | - | chr6_3:75542220-75542239 | Msa0959160:CDS | 35.0% | |
! | GAGATCAAAATGGTCTTGAT+GGG | - | chr6_3:75542370-75542389 | Msa0959160:intron | 35.0% |
CTCGCATGATATCAAATGAA+TGG | - | chr6_3:75542460-75542479 | Msa0959160:intron | 35.0% | |
AAAAATCTCCCCAAACGCTA+GGG | + | chr6_3:75528962-75528981 | None:intergenic | 40.0% | |
AAAAAATCTCCCCAAACGCT+AGG | + | chr6_3:75528963-75528982 | None:intergenic | 40.0% | |
!! | ACCGTAGATTCTGAAGCATA+AGG | + | chr6_3:75528990-75529009 | None:intergenic | 40.0% |
GGAACCTGATATGAATACTG+CGG | - | chr6_3:75529277-75529296 | Msa0959160:intron | 40.0% | |
CTCAAAAACAGAGAAACCCT+TGG | - | chr6_3:75529343-75529362 | Msa0959160:intron | 40.0% | |
!! | CTGTGCTATTTAGGGTGTTA+AGG | - | chr6_3:75529510-75529529 | Msa0959160:CDS | 40.0% |
! | TTTAGGGTGTTAAGGCAACA+TGG | - | chr6_3:75529518-75529537 | Msa0959160:CDS | 40.0% |
!! | AGGAGTGTCTTTCGTTTGAT+CGG | - | chr6_3:75529835-75529854 | Msa0959160:CDS | 40.0% |
AGGAAACTTCAGGGAAACAT+TGG | - | chr6_3:75530195-75530214 | Msa0959160:intron | 40.0% | |
AACATTGGTCAGAGATGTTG+AGG | - | chr6_3:75530210-75530229 | Msa0959160:intron | 40.0% | |
ACATTGGTCAGAGATGTTGA+GGG | - | chr6_3:75530211-75530230 | Msa0959160:intron | 40.0% | |
GTATGAAGCCTCACATATGA+TGG | - | chr6_3:75530246-75530265 | Msa0959160:intron | 40.0% | |
ACCATGAACCATCATATGTG+AGG | + | chr6_3:75530257-75530276 | None:intergenic | 40.0% | |
TTGCAAGAGAAGGACTCAAT+CGG | + | chr6_3:75530339-75530358 | None:intergenic | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | + | chr6_3:75530434-75530453 | None:intergenic | 40.0% | |
!! | CTGTATATATAGGTGGTGGA+AGG | - | chr6_3:75530631-75530650 | Msa0959160:intron | 40.0% |
ACTACTCTATCTCGTGCATA+CGG | + | chr6_3:75530680-75530699 | None:intergenic | 40.0% | |
GTGGGATATTAATTGCTTGG+AGG | - | chr6_3:75531133-75531152 | Msa0959160:intron | 40.0% | |
TAATTGCTTGGAGGATCTTC+CGG | - | chr6_3:75531142-75531161 | Msa0959160:intron | 40.0% | |
!! | CTTCTTTTAAGAAGGGGTCA+AGG | + | chr6_3:75531253-75531272 | None:intergenic | 40.0% |
ATAGTTAGCATTCAGCCATC+TGG | + | chr6_3:75532054-75532073 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | - | chr6_3:75532131-75532150 | Msa0959160:intron | 40.0% | |
CGACAAAAGACATCTTTGAC+TGG | - | chr6_3:75532168-75532187 | Msa0959160:intron | 40.0% | |
ATGCTGCTGCTATACATTGT+AGG | - | chr6_3:75532216-75532235 | Msa0959160:intron | 40.0% | |
CTGCTATACATTGTAGGCTT+AGG | - | chr6_3:75532222-75532241 | Msa0959160:intron | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | - | chr6_3:75532392-75532411 | Msa0959160:intron | 40.0% | |
!! | ATAGGTAACGGAACTTCAGT+TGG | + | chr6_3:75532522-75532541 | None:intergenic | 40.0% |
!! | CAATCTCTCGCGTTTTATTG+AGG | - | chr6_3:75532557-75532576 | Msa0959160:intron | 40.0% |
GATAACTACACACACTCTGA+CGG | - | chr6_3:75532597-75532616 | Msa0959160:intron | 40.0% | |
!! | AATGTTTGCTAGGTTCTGGA+AGG | + | chr6_3:75533132-75533151 | None:intergenic | 40.0% |
CTAGATAGTTACCAAGCTAG+AGG | - | chr6_3:75533241-75533260 | Msa0959160:intron | 40.0% | |
AGATAGTTACCAAGCTAGAG+GGG | - | chr6_3:75533243-75533262 | Msa0959160:intron | 40.0% | |
ATTAATCACTAGATGCGCCT+AGG | - | chr6_3:75533647-75533666 | Msa0959160:intron | 40.0% | |
TTAATCACTAGATGCGCCTA+GGG | - | chr6_3:75533648-75533667 | Msa0959160:intron | 40.0% | |
! | TTCTCACATTTGAGATGCTC+GGG | + | chr6_3:75533688-75533707 | None:intergenic | 40.0% |
! | CTTCTCACATTTGAGATGCT+CGG | + | chr6_3:75533689-75533708 | None:intergenic | 40.0% |
AAATTCTGTATGAGGAAGGC+TGG | + | chr6_3:75533791-75533810 | None:intergenic | 40.0% | |
TCAGCCCATCTATGAATCTT+AGG | + | chr6_3:75534326-75534345 | None:intergenic | 40.0% | |
!! | TCATAGATGGGCTGAACTAA+TGG | - | chr6_3:75534331-75534350 | Msa0959160:intron | 40.0% |
!!! | ATTTTTTCCCAAGGCAAGGA+AGG | + | chr6_3:75534365-75534384 | None:intergenic | 40.0% |
TTCCTTGCCTTGGGAAAAAA+TGG | - | chr6_3:75534364-75534383 | Msa0959160:intron | 40.0% | |
!!! | TTCCATTTTTTCCCAAGGCA+AGG | + | chr6_3:75534369-75534388 | None:intergenic | 40.0% |
!!! | TGGCATTCCATTTTTTCCCA+AGG | + | chr6_3:75534374-75534393 | None:intergenic | 40.0% |
AACCCCCCTGTTTATATTGT+TGG | + | chr6_3:75534653-75534672 | None:intergenic | 40.0% | |
! | CAGAGCAAGTTTAACCGTTT+TGG | + | chr6_3:75534710-75534729 | None:intergenic | 40.0% |
TTACTTGTCCGGATTGTGTT+AGG | + | chr6_3:75534914-75534933 | None:intergenic | 40.0% | |
TTTAACGCTCATGTGTGAAG+TGG | - | chr6_3:75534942-75534961 | Msa0959160:intron | 40.0% | |
TTAACGCTCATGTGTGAAGT+GGG | - | chr6_3:75534943-75534962 | Msa0959160:intron | 40.0% | |
TGTTCTCCTACCATAAGACA+AGG | - | chr6_3:75535456-75535475 | Msa0959160:intron | 40.0% | |
GTTCTCCTACCATAAGACAA+GGG | - | chr6_3:75535457-75535476 | Msa0959160:intron | 40.0% | |
TTCTCCTACCATAAGACAAG+GGG | - | chr6_3:75535458-75535477 | Msa0959160:intron | 40.0% | |
AAATCTTGCCCCTTGTCTTA+TGG | + | chr6_3:75535469-75535488 | None:intergenic | 40.0% | |
ATAAGACAAGGGGCAAGATT+TGG | - | chr6_3:75535468-75535487 | Msa0959160:intron | 40.0% | |
TAAGACAAGGGGCAAGATTT+GGG | - | chr6_3:75535469-75535488 | Msa0959160:intron | 40.0% | |
CTCATAGGGTACGCTATATT+TGG | - | chr6_3:75535682-75535701 | Msa0959160:intron | 40.0% | |
! | GTTGAATCCTGCTATTTGGT+TGG | + | chr6_3:75535759-75535778 | None:intergenic | 40.0% |
ATAAGTCTGGTAGGAATCAG+TGG | + | chr6_3:75536147-75536166 | None:intergenic | 40.0% | |
AAGTGAGACATAAGTCTGGT+AGG | + | chr6_3:75536156-75536175 | None:intergenic | 40.0% | |
GAAATAAGAAGTTCAGGGTG+TGG | + | chr6_3:75536293-75536312 | None:intergenic | 40.0% | |
! | CACCCTGAACTTCTTATTTC+GGG | - | chr6_3:75536293-75536312 | Msa0959160:intron | 40.0% |
CACCCGAAATAAGAAGTTCA+GGG | + | chr6_3:75536298-75536317 | None:intergenic | 40.0% | |
GGTTGCAGAAAAGTAAGCAA+CGG | - | chr6_3:75536565-75536584 | Msa0959160:intron | 40.0% | |
! | GTCACTTTCAGCTTAGTAAG+AGG | - | chr6_3:75537001-75537020 | Msa0959160:intron | 40.0% |
AGTAAGAGGTCGTGAGTTAT+TGG | - | chr6_3:75537015-75537034 | Msa0959160:intron | 40.0% | |
GTAAGAGGTCGTGAGTTATT+GGG | - | chr6_3:75537016-75537035 | Msa0959160:intron | 40.0% | |
TTGGGTTCGATTTCAAACCT+AGG | - | chr6_3:75537034-75537053 | Msa0959160:intron | 40.0% | |
GTCTCTATTGTTGCACGTAA+AGG | - | chr6_3:75537128-75537147 | Msa0959160:intron | 40.0% | |
GCAAGGTCAATTTGATGAGA+AGG | - | chr6_3:75538133-75538152 | Msa0959160:intron | 40.0% | |
CCAAACATGAAACCAAAGAG+AGG | + | chr6_3:75538249-75538268 | None:intergenic | 40.0% | |
! | CCTCTCTTTGGTTTCATGTT+TGG | - | chr6_3:75538246-75538265 | Msa0959160:intron | 40.0% |
! | TTTGGTTTCATGTTTGGCTC+TGG | - | chr6_3:75538252-75538271 | Msa0959160:intron | 40.0% |
!! | TTTCATGTTTGGCTCTGGTT+GGG | - | chr6_3:75538257-75538276 | Msa0959160:intron | 40.0% |
!! | TCATTTGGTTTGCCTCTGTT+TGG | - | chr6_3:75538375-75538394 | Msa0959160:intron | 40.0% |
!! | CATTTGGTTTGCCTCTGTTT+GGG | - | chr6_3:75538376-75538395 | Msa0959160:intron | 40.0% |
! | TGACCGTGTTTTCCAAAATG+TGG | - | chr6_3:75538418-75538437 | Msa0959160:intron | 40.0% |
TACTTCCACCTAAATGGCAA+AGG | - | chr6_3:75538448-75538467 | Msa0959160:intron | 40.0% | |
ATTTAATTGGTCCACATCCG+CGG | - | chr6_3:75538810-75538829 | Msa0959160:intron | 40.0% | |
!!! | TGTATTTTGGAACGGGGAAT+AGG | + | chr6_3:75539060-75539079 | None:intergenic | 40.0% |
!!! | TGCGACATGTATTTTGGAAC+GGG | + | chr6_3:75539067-75539086 | None:intergenic | 40.0% |
! | TGTGTATCGGCATATGTAAG+TGG | + | chr6_3:75539095-75539114 | None:intergenic | 40.0% |
CATATGCCGATACACAACTT+TGG | - | chr6_3:75539099-75539118 | Msa0959160:CDS | 40.0% | |
!! | TGTCTCAAGTTGGATAAGCT+CGG | - | chr6_3:75539391-75539410 | Msa0959160:CDS | 40.0% |
GTAAAGGTCAAGAAGCCATT+TGG | + | chr6_3:75539495-75539514 | None:intergenic | 40.0% | |
TCAAGTATCTTTGATGGGAG+GGG | + | chr6_3:75539591-75539610 | None:intergenic | 40.0% | |
!! | TGTTTTGAATTTGAGGGGAG+AGG | + | chr6_3:75539656-75539675 | None:intergenic | 40.0% |
TTCAAGCTTCTCTTAAGGAG+GGG | - | chr6_3:75540325-75540344 | Msa0959160:intron | 40.0% | |
GAAAACACTGTTTCCTACGA+AGG | + | chr6_3:75540424-75540443 | None:intergenic | 40.0% | |
AAAGGAGAACACGTTTCGTA+AGG | + | chr6_3:75540497-75540516 | None:intergenic | 40.0% | |
CATTGAACACTACTTTGCTG+AGG | - | chr6_3:75540550-75540569 | Msa0959160:intron | 40.0% | |
TGGTGTTCAACATCAAATGC+AGG | + | chr6_3:75540598-75540617 | None:intergenic | 40.0% | |
GTGCAACTTCATAGAGTTCA+TGG | + | chr6_3:75540643-75540662 | None:intergenic | 40.0% | |
AGAAAAACATGGTGAGGATG+TGG | - | chr6_3:75540854-75540873 | Msa0959160:CDS | 40.0% | |
! | CCAGGAATTTTATAGAGCCT+GGG | - | chr6_3:75540882-75540901 | Msa0959160:CDS | 40.0% |
!! | TGGCTCTATAATTTTTGCCC+AGG | + | chr6_3:75540902-75540921 | None:intergenic | 40.0% |
TGGGCAAAAATTATAGAGCC+AGG | - | chr6_3:75540901-75540920 | Msa0959160:CDS | 40.0% | |
!! | TAAGTGGGTTAATGGGCTAT+TGG | - | chr6_3:75540979-75540998 | Msa0959160:intron | 40.0% |
!! | AAGTGGGTTAATGGGCTATT+GGG | - | chr6_3:75540980-75540999 | Msa0959160:intron | 40.0% |
GCTTTGTAAAGGGCAATGAA+AGG | + | chr6_3:75541051-75541070 | None:intergenic | 40.0% | |
CTTGACAAGCCATAATGAAG+TGG | + | chr6_3:75541213-75541232 | None:intergenic | 40.0% | |
AAACTTCAGTGGTCTCATTC+TGG | + | chr6_3:75541341-75541360 | None:intergenic | 40.0% | |
ACGCTTATTGAACGCTTTCA+TGG | - | chr6_3:75541989-75542008 | Msa0959160:intron | 40.0% | |
ATTGAACGCTTTCATGGAAG+AGG | - | chr6_3:75541995-75542014 | Msa0959160:intron | 40.0% | |
! | TGAATTCTGGTCACTTTCCA+AGG | - | chr6_3:75542027-75542046 | Msa0959160:intron | 40.0% |
! | GAATTCTGGTCACTTTCCAA+GGG | - | chr6_3:75542028-75542047 | Msa0959160:intron | 40.0% |
TTCAAGTAATCTTCTGCCCT+TGG | + | chr6_3:75542047-75542066 | None:intergenic | 40.0% | |
ATGCATGTACAAGCACAACA+TGG | + | chr6_3:75542094-75542113 | None:intergenic | 40.0% | |
TGTACATGCATTCTTCCTGT+TGG | - | chr6_3:75542103-75542122 | Msa0959160:CDS | 40.0% | |
GCCACCGAATATATGACATT+TGG | + | chr6_3:75542182-75542201 | None:intergenic | 40.0% | |
CGTCTCTCTGATGATTTAGA+AGG | - | chr6_3:75542212-75542231 | Msa0959160:CDS | 40.0% | |
ATCCATGTATGAATGCAGAG+TGG | - | chr6_3:75542348-75542367 | Msa0959160:intron | 40.0% | |
ATGCAGAGTGGAGATCAAAA+TGG | - | chr6_3:75542360-75542379 | Msa0959160:intron | 40.0% | |
! | GGAGATCAAAATGGTCTTGA+TGG | - | chr6_3:75542369-75542388 | Msa0959160:intron | 40.0% |
CGTCTTCACTGGAAATATCT+TGG | + | chr6_3:75542425-75542444 | None:intergenic | 40.0% | |
! | TGCAGCATTGAGACCAAAAT+TGG | + | chr6_3:75542538-75542557 | None:intergenic | 40.0% |
CTCTTATAGTGGTACATGAG+GGG | + | chr6_3:75542570-75542589 | None:intergenic | 40.0% | |
GCTCTTATAGTGGTACATGA+GGG | + | chr6_3:75542571-75542590 | None:intergenic | 40.0% | |
TGCTCTTATAGTGGTACATG+AGG | + | chr6_3:75542572-75542591 | None:intergenic | 40.0% | |
TCAATGACTTGACATGTTCC+TGG | + | chr6_3:75542614-75542633 | None:intergenic | 40.0% | |
AGATTTCCACCCTAGCGTTT+GGG | - | chr6_3:75528950-75528969 | Msa0959160:three_prime_UTR | 45.0% | |
TGTGCCGCAGTATTCATATC+AGG | + | chr6_3:75529284-75529303 | None:intergenic | 45.0% | |
CATGGACTTTACGTTTCACC+TGG | - | chr6_3:75529536-75529555 | Msa0959160:CDS | 45.0% | |
AACCAATTCAAGGACGAGCA+AGG | - | chr6_3:75530175-75530194 | Msa0959160:intron | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | + | chr6_3:75530180-75530199 | None:intergenic | 45.0% | |
GCCTCACATATGATGGTTCA+TGG | - | chr6_3:75530253-75530272 | Msa0959160:intron | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | + | chr6_3:75530338-75530357 | None:intergenic | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | - | chr6_3:75530393-75530412 | Msa0959160:CDS | 45.0% | |
! | TAACTTCTTGCCACTAGCCT+AGG | + | chr6_3:75530406-75530425 | None:intergenic | 45.0% |
GCTCCAAAGCCTACATCAAA+AGG | - | chr6_3:75530498-75530517 | Msa0959160:CDS | 45.0% | |
!! | ATATAGGTGGTGGAAGGAGT+TGG | - | chr6_3:75530637-75530656 | Msa0959160:intron | 45.0% |
AGCCCCAATATTCTCAAGCA+AGG | - | chr6_3:75530735-75530754 | Msa0959160:intron | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | + | chr6_3:75532034-75532053 | None:intergenic | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | - | chr6_3:75532036-75532055 | Msa0959160:intron | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | + | chr6_3:75532080-75532099 | None:intergenic | 45.0% | |
ATCAAGTGGTTACCCAGTGT+TGG | - | chr6_3:75532112-75532131 | Msa0959160:intron | 45.0% | |
AAGAAGTCGTAGCCAACACT+GGG | + | chr6_3:75532127-75532146 | None:intergenic | 45.0% | |
TAAGAAGTCGTAGCCAACAC+TGG | + | chr6_3:75532128-75532147 | None:intergenic | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | - | chr6_3:75532244-75532263 | Msa0959160:intron | 45.0% | |
GATAGTTACCAAGCTAGAGG+GGG | - | chr6_3:75533244-75533263 | Msa0959160:intron | 45.0% | |
ATAGTTACCAAGCTAGAGGG+GGG | - | chr6_3:75533245-75533264 | Msa0959160:intron | 45.0% | |
! | TCTCACATTTGAGATGCTCG+GGG | + | chr6_3:75533687-75533706 | None:intergenic | 45.0% |
TGGGTTTGGGCTAAAAACAC+AGG | + | chr6_3:75533747-75533766 | None:intergenic | 45.0% | |
CAAAACTGTGGCAGTTCAAG+AGG | - | chr6_3:75533817-75533836 | Msa0959160:intron | 45.0% | |
GTTCAAGAGGAAGGCAACTT+TGG | - | chr6_3:75533830-75533849 | Msa0959160:intron | 45.0% | |
GTAGTAACTCTGCTGAACCT+AGG | - | chr6_3:75534149-75534168 | Msa0959160:intron | 45.0% | |
TGCTGAACCTAGGATGTAAC+TGG | - | chr6_3:75534159-75534178 | Msa0959160:intron | 45.0% | |
ATTAGGGAAACAAGCGTCTC+CGG | - | chr6_3:75534188-75534207 | Msa0959160:intron | 45.0% | |
AACCTTTACCTTCCTTGCCT+TGG | - | chr6_3:75534354-75534373 | Msa0959160:intron | 45.0% | |
ACCTTTACCTTCCTTGCCTT+GGG | - | chr6_3:75534355-75534374 | Msa0959160:intron | 45.0% | |
ATCTAGGTCTATCCCTCTGA+TGG | + | chr6_3:75534479-75534498 | None:intergenic | 45.0% | |
TAGTATAGACCCCGCACATA+AGG | - | chr6_3:75534508-75534527 | Msa0959160:intron | 45.0% | |
AGTATAGACCCCGCACATAA+GGG | - | chr6_3:75534509-75534528 | Msa0959160:intron | 45.0% | |
! | TTAGGGCGTTCTAACCTAGT+CGG | + | chr6_3:75534567-75534586 | None:intergenic | 45.0% |
TTCGAGGTTATAAGGAGGCT+AGG | - | chr6_3:75535066-75535085 | Msa0959160:intron | 45.0% | |
TCGAGGTTATAAGGAGGCTA+GGG | - | chr6_3:75535067-75535086 | Msa0959160:intron | 45.0% | |
! | TGCATGGTGACCGACAATTT+TGG | + | chr6_3:75535804-75535823 | None:intergenic | 45.0% |
GGCTAAGTGAGACATAAGTC+TGG | + | chr6_3:75536160-75536179 | None:intergenic | 45.0% | |
GCACCCGAAATAAGAAGTTC+AGG | + | chr6_3:75536299-75536318 | None:intergenic | 45.0% | |
TGTTGCATGATGGTCGGATT+AGG | - | chr6_3:75536361-75536380 | Msa0959160:intron | 45.0% | |
TGCATAGATAAAACCCGCCA+TGG | - | chr6_3:75537240-75537259 | Msa0959160:intron | 45.0% | |
GCATAGATAAAACCCGCCAT+GGG | - | chr6_3:75537241-75537260 | Msa0959160:intron | 45.0% | |
! | GAGAAGGCATGTTCTTCATC+AGG | - | chr6_3:75538149-75538168 | Msa0959160:intron | 45.0% |
ATGTTCTTCATCAGGACGAC+TGG | - | chr6_3:75538157-75538176 | Msa0959160:intron | 45.0% | |
!! | GTTTCATGTTTGGCTCTGGT+TGG | - | chr6_3:75538256-75538275 | Msa0959160:intron | 45.0% |
GCTCTGGTTGGGTATTTCTT+CGG | - | chr6_3:75538268-75538287 | Msa0959160:intron | 45.0% | |
GGTATTTCTTCGGTTTCCTC+AGG | - | chr6_3:75538278-75538297 | Msa0959160:intron | 45.0% | |
ATGTTGACGAAGATCACCTG+AGG | + | chr6_3:75538297-75538316 | None:intergenic | 45.0% | |
! | TTTGGGTCCTTTGGAAGGAA+AGG | - | chr6_3:75538393-75538412 | Msa0959160:intron | 45.0% |
GGTCATTCCTTTCCTTCCAA+AGG | + | chr6_3:75538403-75538422 | None:intergenic | 45.0% | |
GCTACAGTTATCATGACTGG+TGG | - | chr6_3:75538519-75538538 | Msa0959160:intron | 45.0% | |
ACTGTGATTTACCTCGCACA+AGG | + | chr6_3:75538669-75538688 | None:intergenic | 45.0% | |
TTTAATTGGTCCACATCCGC+GGG | - | chr6_3:75538811-75538830 | Msa0959160:intron | 45.0% | |
GAACGGGGAATAGGAATATG+TGG | + | chr6_3:75539051-75539070 | None:intergenic | 45.0% | |
!!! | GCGACATGTATTTTGGAACG+GGG | + | chr6_3:75539066-75539085 | None:intergenic | 45.0% |
!! | GTCTCAAGTTGGATAAGCTC+GGG | - | chr6_3:75539392-75539411 | Msa0959160:CDS | 45.0% |
CTTTGCTGAGGAGATCAAAG+TGG | - | chr6_3:75540562-75540581 | Msa0959160:intron | 45.0% | |
GGAGGCCATTATGTAAATGC+AGG | - | chr6_3:75540686-75540705 | Msa0959160:intron | 45.0% | |
AAAACATGGTGAGGATGTGG+CGG | - | chr6_3:75540857-75540876 | Msa0959160:CDS | 45.0% | |
! | GCCAGGAATTTTATAGAGCC+TGG | - | chr6_3:75540881-75540900 | Msa0959160:CDS | 45.0% |
CCCAGGCTCTATAAAATTCC+TGG | + | chr6_3:75540885-75540904 | None:intergenic | 45.0% | |
TGTAAAGGGCAATGAAAGGG+CGG | + | chr6_3:75541047-75541066 | None:intergenic | 45.0% | |
CATGTAGAAGCTCACAACAG+AGG | + | chr6_3:75541128-75541147 | None:intergenic | 45.0% | |
GTTGTGAGCTTCTACATGCA+TGG | - | chr6_3:75541130-75541149 | Msa0959160:CDS | 45.0% | |
TGATTCAGGTGGGAAATCAC+TGG | - | chr6_3:75541744-75541763 | Msa0959160:intron | 45.0% | |
CTCCACTCTGCATTCATACA+TGG | + | chr6_3:75542353-75542372 | None:intergenic | 45.0% | |
ATGTCTTTGCACGTCTTCAC+TGG | + | chr6_3:75542436-75542455 | None:intergenic | 45.0% | |
TGGTCTCAATGCTGCAAGAA+TGG | - | chr6_3:75542542-75542561 | Msa0959160:intron | 45.0% | |
CATGTTCCTGGAGATTAGAG+AGG | + | chr6_3:75542602-75542621 | None:intergenic | 45.0% | |
!!! | AATTTTTTTTTACATAAAAT+AGG | - | chr6_3:75529815-75529834 | Msa0959160:CDS | 5.0% |
!! | AAAATAAAAAAACTTATTAA+GGG | + | chr6_3:75536756-75536775 | None:intergenic | 5.0% |
!! | TAAAATAAAAAAACTTATTA+AGG | + | chr6_3:75536757-75536776 | None:intergenic | 5.0% |
!! | ATAAATAAAATAAAAATTGA+GGG | + | chr6_3:75539764-75539783 | None:intergenic | 5.0% |
!! | TATAAATAAAATAAAAATTG+AGG | + | chr6_3:75539765-75539784 | None:intergenic | 5.0% |
!!! | ACATATTTTAATTTTATTTT+GGG | + | chr6_3:75539949-75539968 | None:intergenic | 5.0% |
!!! | AATATAAATTTTATTTTTCA+AGG | - | chr6_3:75540259-75540278 | Msa0959160:intron | 5.0% |
!!! | ATATAAATTTTATTTTTCAA+GGG | - | chr6_3:75540260-75540279 | Msa0959160:intron | 5.0% |
CAGATTTCCACCCTAGCGTT+TGG | - | chr6_3:75528949-75528968 | Msa0959160:three_prime_UTR | 50.0% | |
GATTTCCACCCTAGCGTTTG+GGG | - | chr6_3:75528951-75528970 | Msa0959160:three_prime_UTR | 50.0% | |
AGGACGAGCAAGGAAACTTC+AGG | - | chr6_3:75530185-75530204 | Msa0959160:intron | 50.0% | |
GGACGAGCAAGGAAACTTCA+GGG | - | chr6_3:75530186-75530205 | Msa0959160:intron | 50.0% | |
!! | GAGGCGTTCGCTTTTACTTC+TGG | - | chr6_3:75530292-75530311 | Msa0959160:CDS | 50.0% |
TTCTGGTCACCTTGAGTCCA+TGG | - | chr6_3:75530309-75530328 | Msa0959160:CDS | 50.0% | |
AAGAGAAGGACTCAATCGGG+TGG | + | chr6_3:75530335-75530354 | None:intergenic | 50.0% | |
CTCTGCGCAAAAACTTGCCT+AGG | - | chr6_3:75530386-75530405 | Msa0959160:CDS | 50.0% | |
TAGTTACCAAGCTAGAGGGG+GGG | - | chr6_3:75533246-75533265 | Msa0959160:intron | 50.0% | |
ACTGTGGCAGTTCAAGAGGA+AGG | - | chr6_3:75533821-75533840 | Msa0959160:intron | 50.0% | |
!! | GAAGGCAACTTTGGAGCTTC+AGG | - | chr6_3:75533839-75533858 | Msa0959160:intron | 50.0% |
TTAGGGAAACAAGCGTCTCC+GGG | - | chr6_3:75534189-75534208 | Msa0959160:intron | 50.0% | |
TCCCAAGGCAAGGAAGGTAA+AGG | + | chr6_3:75534359-75534378 | None:intergenic | 50.0% | |
AACTGCACCTGCTAATCGCA+CGG | + | chr6_3:75534454-75534473 | None:intergenic | 50.0% | |
AGGTGCAGTTAGCCATCAGA+GGG | - | chr6_3:75534464-75534483 | Msa0959160:intron | 50.0% | |
GTGCGGGGTCTATACTATCT+CGG | + | chr6_3:75534505-75534524 | None:intergenic | 50.0% | |
TTGCAGCTTGACAACCGACT+AGG | - | chr6_3:75534550-75534569 | Msa0959160:intron | 50.0% | |
GGACGAAACGACAATCCTTG+TGG | - | chr6_3:75534813-75534832 | Msa0959160:intron | 50.0% | |
CTTGCCCCTTGTCTTATGGT+AGG | + | chr6_3:75535465-75535484 | None:intergenic | 50.0% | |
AGAGTAGATTCGCAGAGCGA+AGG | - | chr6_3:75535576-75535595 | Msa0959160:intron | 50.0% | |
GAATCAGTGGCCCAGCATTA+TGG | + | chr6_3:75536134-75536153 | None:intergenic | 50.0% | |
GCTTGATGTGGTGAGCTTCA+TGG | - | chr6_3:75536240-75536259 | Msa0959160:intron | 50.0% | |
AACGAGCTCACAACGAGGAT+AGG | + | chr6_3:75536328-75536347 | None:intergenic | 50.0% | |
ACGAGCCTCTTGTTGCATGA+TGG | - | chr6_3:75536351-75536370 | Msa0959160:intron | 50.0% | |
GCCTCTTGTTGCATGATGGT+CGG | - | chr6_3:75536355-75536374 | Msa0959160:intron | 50.0% | |
TCCGACCATCATGCAACAAG+AGG | + | chr6_3:75536359-75536378 | None:intergenic | 50.0% | |
! | TGTGGTTCTACTCCGTTCGA+TGG | - | chr6_3:75537101-75537120 | Msa0959160:intron | 50.0% |
GTGGGTAGGTTAACTCTTGC+AGG | - | chr6_3:75537270-75537289 | Msa0959160:intron | 50.0% | |
GGTAGGTTAACTCTTGCAGG+CGG | - | chr6_3:75537273-75537292 | Msa0959160:intron | 50.0% | |
! | TGGCTTGTGTGTCAGGATGT+GGG | - | chr6_3:75538177-75538196 | Msa0959160:intron | 50.0% |
TGTGTCAGGATGTGGGAACT+TGG | - | chr6_3:75538184-75538203 | Msa0959160:intron | 50.0% | |
TTGCCTCTGTTTGGGTCCTT+TGG | - | chr6_3:75538384-75538403 | Msa0959160:intron | 50.0% | |
CTTCCAAAGGACCCAAACAG+AGG | + | chr6_3:75538390-75538409 | None:intergenic | 50.0% | |
CTCTGTTTGGGTCCTTTGGA+AGG | - | chr6_3:75538388-75538407 | Msa0959160:intron | 50.0% | |
TTAATTGGTCCACATCCGCG+GGG | - | chr6_3:75538812-75538831 | Msa0959160:intron | 50.0% | |
!! | TCAAGTTGGATAAGCTCGGG+TGG | - | chr6_3:75539395-75539414 | Msa0959160:CDS | 50.0% |
! | TTCGTGGATTGAGCCTTCGT+AGG | - | chr6_3:75540408-75540427 | Msa0959160:CDS | 50.0% |
TGCACTTGCATTCCGCTTGT+TGG | - | chr6_3:75540658-75540677 | Msa0959160:intron | 50.0% | |
GCACTTGCATTCCGCTTGTT+GGG | - | chr6_3:75540659-75540678 | Msa0959160:intron | 50.0% | |
!! | GGGTTAATGGGCTATTGGGT+TGG | - | chr6_3:75540984-75541003 | Msa0959160:intron | 50.0% |
!! | AAAGAAAGTATCACGCCGGG+TGG | - | chr6_3:75541016-75541035 | Msa0959160:intron | 50.0% |
CGATGTTCATCACGGGACAT+TGG | - | chr6_3:75541603-75541622 | Msa0959160:intron | 50.0% | |
CTTTCATGGAAGAGGCTCGT+TGG | - | chr6_3:75542003-75542022 | Msa0959160:intron | 50.0% | |
! | GAGGCTCGTTGGTTGAATTC+TGG | - | chr6_3:75542014-75542033 | Msa0959160:intron | 50.0% |
GGCTAGGGTTGCTCTTATAG+TGG | + | chr6_3:75542581-75542600 | None:intergenic | 50.0% | |
CCTGGAGATTAGAGAGGCTA+GGG | + | chr6_3:75542596-75542615 | None:intergenic | 50.0% | |
TCCTGGAGATTAGAGAGGCT+AGG | + | chr6_3:75542597-75542616 | None:intergenic | 50.0% | |
AATCTCCCCAAACGCTAGGG+TGG | + | chr6_3:75528959-75528978 | None:intergenic | 55.0% | |
TATTCACCCCCCCTCTAGCT+TGG | + | chr6_3:75533255-75533274 | None:intergenic | 55.0% | |
TAGGGAAACAAGCGTCTCCG+GGG | - | chr6_3:75534190-75534209 | Msa0959160:intron | 55.0% | |
CAGGTGCAGTTAGCCATCAG+AGG | - | chr6_3:75534463-75534482 | Msa0959160:intron | 55.0% | |
GACGATGACCCTTATGTGCG+GGG | + | chr6_3:75534520-75534539 | None:intergenic | 55.0% | |
CGACGATGACCCTTATGTGC+GGG | + | chr6_3:75534521-75534540 | None:intergenic | 55.0% | |
CCGACGATGACCCTTATGTG+CGG | + | chr6_3:75534522-75534541 | None:intergenic | 55.0% | |
CCGCACATAAGGGTCATCGT+CGG | - | chr6_3:75534519-75534538 | Msa0959160:intron | 55.0% | |
GTAGATTCGCAGAGCGAAGG+TGG | - | chr6_3:75535579-75535598 | Msa0959160:intron | 55.0% | |
GCGGGGATAAGTAGAGAGCA+TGG | + | chr6_3:75536204-75536223 | None:intergenic | 55.0% | |
TGCTCTCTACTTATCCCCGC+TGG | - | chr6_3:75536204-75536223 | Msa0959160:intron | 55.0% | |
GCTCTCTACTTATCCCCGCT+GGG | - | chr6_3:75536205-75536224 | Msa0959160:intron | 55.0% | |
GAGCTCACAACGAGGATAGG+TGG | + | chr6_3:75536325-75536344 | None:intergenic | 55.0% | |
GTCACAACGAGCTCACAACG+AGG | + | chr6_3:75536333-75536352 | None:intergenic | 55.0% | |
!! | TACCCACTTTTCGCCCATGG+CGG | + | chr6_3:75537257-75537276 | None:intergenic | 55.0% |
!! | ACCTACCCACTTTTCGCCCA+TGG | + | chr6_3:75537260-75537279 | None:intergenic | 55.0% |
! | CTGGCTTGTGTGTCAGGATG+TGG | - | chr6_3:75538176-75538195 | Msa0959160:intron | 55.0% |
TAATTGGTCCACATCCGCGG+GGG | - | chr6_3:75538813-75538832 | Msa0959160:intron | 55.0% | |
TAAATTACCCCCCGCGGATG+TGG | + | chr6_3:75538824-75538843 | None:intergenic | 55.0% | |
TGTGGGTAAATTACCCCCCG+CGG | + | chr6_3:75538830-75538849 | None:intergenic | 55.0% | |
! | GCATTCCGCTTGTTGGGACA+AGG | - | chr6_3:75540665-75540684 | Msa0959160:intron | 55.0% |
! | TTCCGCTTGTTGGGACAAGG+AGG | - | chr6_3:75540668-75540687 | Msa0959160:intron | 55.0% |
CCCTAGCCTCTCTAATCTCC+AGG | - | chr6_3:75542593-75542612 | Msa0959160:intron | 55.0% | |
ATCGGGTGGCCATGGACTCA+AGG | + | chr6_3:75530321-75530340 | None:intergenic | 60.0% | |
AGGACTCAATCGGGTGGCCA+TGG | + | chr6_3:75530329-75530348 | None:intergenic | 60.0% | |
GGGCACAGATAGCATGCCCT+AGG | + | chr6_3:75533667-75533686 | None:intergenic | 60.0% | |
CACGGTGATCCGTACGTGTG+CGG | + | chr6_3:75534436-75534455 | None:intergenic | 60.0% | |
CGGATCACCGTGCGATTAGC+AGG | - | chr6_3:75534444-75534463 | Msa0959160:intron | 60.0% | |
TTATCCCCGCTGGGACTTCG+CGG | - | chr6_3:75536214-75536233 | Msa0959160:intron | 60.0% | |
! | ACTTCGCGGTGGGCTTGATG+TGG | - | chr6_3:75536228-75536247 | Msa0959160:intron | 60.0% |
GCGAGCTTGCAGTGAGGTCA+TGG | + | chr6_3:75536266-75536285 | None:intergenic | 60.0% | |
GACCTCACTGCAAGCTCGCT+TGG | - | chr6_3:75536267-75536286 | Msa0959160:intron | 60.0% | |
AACCCGCCATGGGCGAAAAG+TGG | - | chr6_3:75537251-75537270 | Msa0959160:intron | 60.0% | |
ACCCGCCATGGGCGAAAAGT+GGG | - | chr6_3:75537252-75537271 | Msa0959160:intron | 60.0% | |
!! | ACCCACTTTTCGCCCATGGC+GGG | + | chr6_3:75537256-75537275 | None:intergenic | 60.0% |
GCCATGGGCGAAAAGTGGGT+AGG | - | chr6_3:75537256-75537275 | Msa0959160:intron | 60.0% | |
!! | GGACGACTGGCTTGTGTGTC+AGG | - | chr6_3:75538170-75538189 | Msa0959160:intron | 60.0% |
CCTCGCACAAGGCGTGCAAA+AGG | + | chr6_3:75538658-75538677 | None:intergenic | 60.0% | |
! | CCTTTTGCACGCCTTGTGCG+AGG | - | chr6_3:75538655-75538674 | Msa0959160:intron | 60.0% |
AATTGGTCCACATCCGCGGG+GGG | - | chr6_3:75538814-75538833 | Msa0959160:intron | 60.0% | |
GGCCTCCTTGTCCCAACAAG+CGG | + | chr6_3:75540673-75540692 | None:intergenic | 60.0% | |
CGCGAGCGCACATGAATTCC+TGG | + | chr6_3:75540922-75540941 | None:intergenic | 60.0% | |
!! | GAAAGTATCACGCCGGGTGG+TGG | - | chr6_3:75541019-75541038 | Msa0959160:intron | 60.0% |
GGCCAAGCGAGCTTGCAGTG+AGG | + | chr6_3:75536272-75536291 | None:intergenic | 65.0% | |
AGCCCACCGCGAAGTCCCAG+CGG | + | chr6_3:75536223-75536242 | None:intergenic | 70.0% | |
! | GGTGAGGATGTGGCGGAGCC+AGG | - | chr6_3:75540864-75540883 | Msa0959160:CDS | 70.0% |
GAAAGGGCGGAGCCACCACC+CGG | + | chr6_3:75541034-75541053 | None:intergenic | 70.0% | |
TCCCCGCTGGGACTTCGCGG+TGG | - | chr6_3:75536217-75536236 | Msa0959160:intron | 75.0% | |
CCCACCGCGAAGTCCCAGCG+GGG | + | chr6_3:75536221-75536240 | None:intergenic | 75.0% | |
CCCCGCTGGGACTTCGCGGT+GGG | - | chr6_3:75536218-75536237 | Msa0959160:intron | 75.0% | |
GCCCACCGCGAAGTCCCAGC+GGG | + | chr6_3:75536222-75536241 | None:intergenic | 75.0% | |
TGCGCGCGCGTGCGCAGAGA+TGG | + | chr6_3:75540727-75540746 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 75528891 | 75542748 | 75528891 | ID=Msa0959160;Name=Msa0959160 |
chr6_3 | mRNA | 75528891 | 75542748 | 75528891 | ID=Msa0959160-mRNA-1;Parent=Msa0959160;Name=Msa0959160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.08|0.07|1|1|1|13|89|932 |
chr6_3 | exon | 75528891 | 75529273 | 75528891 | ID=Msa0959160-mRNA-1:exon:13545;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75529398 | 75529655 | 75529398 | ID=Msa0959160-mRNA-1:exon:13544;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75529749 | 75529887 | 75529749 | ID=Msa0959160-mRNA-1:exon:13543;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75529980 | 75530087 | 75529980 | ID=Msa0959160-mRNA-1:exon:13542;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75530275 | 75530518 | 75530275 | ID=Msa0959160-mRNA-1:exon:13541;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75530932 | 75531109 | 75530932 | ID=Msa0959160-mRNA-1:exon:13540;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75539061 | 75539261 | 75539061 | ID=Msa0959160-mRNA-1:exon:13539;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75539374 | 75539622 | 75539374 | ID=Msa0959160-mRNA-1:exon:13538;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75540368 | 75540506 | 75540368 | ID=Msa0959160-mRNA-1:exon:13537;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75540778 | 75540996 | 75540778 | ID=Msa0959160-mRNA-1:exon:13536;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75541100 | 75541472 | 75541100 | ID=Msa0959160-mRNA-1:exon:13535;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75542082 | 75542361 | 75542082 | ID=Msa0959160-mRNA-1:exon:13534;Parent=Msa0959160-mRNA-1 |
chr6_3 | exon | 75542632 | 75542748 | 75542632 | ID=Msa0959160-mRNA-1:exon:13533;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75542632 | 75542748 | 75542632 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75542082 | 75542361 | 75542082 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75541100 | 75541472 | 75541100 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75540778 | 75540996 | 75540778 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75540368 | 75540506 | 75540368 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75539374 | 75539622 | 75539374 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75539061 | 75539261 | 75539061 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75530932 | 75531109 | 75530932 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75530275 | 75530518 | 75530275 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75529980 | 75530087 | 75529980 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75529749 | 75529887 | 75529749 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75529398 | 75529655 | 75529398 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | CDS | 75528980 | 75529273 | 75528980 | ID=Msa0959160-mRNA-1:cds;Parent=Msa0959160-mRNA-1 |
chr6_3 | three_prime_UTR | 75528891 | 75528979 | 75528891 | ID=Msa0959160-mRNA-1:three_prime_utr;Parent=Msa0959160-mRNA-1 |
Gene Sequence |
Protein sequence |