AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959170 MtrunA17_Chr7g0236991 68.885 556 170 1 1 556 1 553 0.0 819
Msa0959170 MtrunA17_Chr7g0237001 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959170 MtrunA17_Chr7g0237041 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959170 MtrunA17_Chr7g0237081 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959170 MtrunA17_Chr7g0237051 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959170 MtrunA17_Chr6g0466051 69.245 556 168 1 1 556 1 553 0.0 815
Msa0959170 MtrunA17_Chr6g0465911 69.065 556 169 1 1 556 1 553 0.0 813
Msa0959170 MtrunA17_Chr5g0425371 68.165 556 174 1 1 556 1 553 0.0 803
Msa0959170 MtrunA17_Chr6g0465441 67.446 556 178 1 1 556 1 553 0.0 795
Msa0959170 MtrunA17_Chr6g0451711 65.889 557 189 1 1 556 1 557 0.0 787
Msa0959170 MtrunA17_Chr3g0105071 66.068 557 188 1 1 556 1 557 0.0 781
Msa0959170 MtrunA17_Chr4g0024691 66.302 549 185 0 8 556 13 561 0.0 771
Msa0959170 MtrunA17_Chr6g0465851 70.270 518 154 0 39 556 1 518 0.0 770
Msa0959170 MtrunA17_Chr3g0082691 65.751 546 186 1 12 556 8 553 0.0 766
Msa0959170 MtrunA17_Chr7g0236961 69.880 498 150 0 59 556 1 498 0.0 752
Msa0959170 MtrunA17_Chr7g0237011 69.880 498 150 0 59 556 1 498 0.0 751
Msa0959170 MtrunA17_Chr5g0431571 66.360 544 182 1 12 554 4 547 0.0 749
Msa0959170 MtrunA17_Chr5g0431651 64.835 546 190 2 13 556 7 552 0.0 742
Msa0959170 MtrunA17_Chr4g0042111 57.092 557 236 2 2 556 7 562 0.0 669
Msa0959170 MtrunA17_Chr7g0236971 68.828 401 125 0 156 556 1 401 0.0 600
Msa0959170 MtrunA17_Chr6g0465981 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959170 MtrunA17_Chr6g0465871 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959170 MtrunA17_Chr6g0466081 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959170 MtrunA17_Chr6g0466111 73.373 338 90 0 39 376 1 338 0.0 519
Msa0959170 MtrunA17_Chr6g0465931 73.077 338 91 0 39 376 1 338 0.0 516
Msa0959170 MtrunA17_Chr2g0319041 45.255 548 292 8 15 556 12 557 5.92e-173 501
Msa0959170 MtrunA17_Chr7g0236951 72.204 313 87 0 59 371 1 313 8.44e-171 486
Msa0959170 MtrunA17_Chr7g0237031 72.204 313 87 0 59 371 1 313 3.34e-170 484
Msa0959170 MtrunA17_Chr8g0336181 44.909 550 295 6 13 556 9 556 4.34e-170 493
Msa0959170 MtrunA17_Chr2g0319051 44.444 513 279 6 48 556 4 514 4.80e-162 471
Msa0959170 MtrunA17_Chr4g0008621 45.000 400 216 4 15 410 19 418 9.08e-122 365
Msa0959170 MtrunA17_Chr6g0466031 64.615 260 92 0 297 556 1 260 8.22e-121 356
Msa0959170 MtrunA17_Chr4g0023911 34.799 546 345 4 13 554 41 579 5.02e-115 353
Msa0959170 MtrunA17_Chr5g0445511 65.966 238 81 0 152 389 2 239 4.18e-113 336
Msa0959170 MtrunA17_Chr2g0319071 36.434 516 276 11 43 554 20 487 2.01e-111 341
Msa0959170 MtrunA17_Chr7g0237061 60.385 260 80 2 297 556 1 237 1.11e-106 319
Msa0959170 MtrunA17_Chr2g0310331 36.414 541 332 8 17 554 53 584 8.98e-105 327
Msa0959170 MtrunA17_Chr2g0323151 35.456 471 289 4 68 534 1 460 5.21e-101 313
Msa0959170 MtrunA17_Chr2g0323131 34.420 491 305 6 49 534 67 545 1.13e-100 315
Msa0959170 MtrunA17_Chr6g0466021 70.098 204 58 1 1 204 1 201 2.32e-99 299
Msa0959170 MtrunA17_Chr7g0237071 70.792 202 59 0 59 260 1 202 1.89e-98 298
Msa0959170 MtrunA17_Chr8g0357411 32.364 550 363 5 7 554 45 587 8.25e-95 301
Msa0959170 MtrunA17_Chr4g0048921 32.621 515 334 6 44 554 64 569 1.16e-88 284
Msa0959170 MtrunA17_Chr7g0237021 68.023 172 55 0 385 556 1 172 7.95e-85 261
Msa0959170 MtrunA17_Chr7g0236941 68.023 172 55 0 385 556 1 172 7.95e-85 261
Msa0959170 MtrunA17_Chr4g0048911 31.076 502 332 7 55 548 61 556 1.65e-81 265
Msa0959170 MtrunA17_Chr6g0465941 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959170 MtrunA17_Chr6g0466121 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959170 MtrunA17_Chr6g0465991 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959170 MtrunA17_Chr6g0466091 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959170 MtrunA17_Chr6g0465881 63.953 172 62 0 385 556 1 172 1.65e-77 242
Msa0959170 MtrunA17_Chr2g0319081 39.755 327 175 8 233 556 120 427 1.65e-75 246
Msa0959170 MtrunA17_Chr2g0319081 31.651 218 139 4 15 224 19 234 3.10e-22 99.4
Msa0959170 MtrunA17_Chr5g0445501 61.628 172 66 0 385 556 1 172 1.71e-74 234
Msa0959170 MtrunA17_Chr2g0280581 29.151 518 342 8 47 547 9 518 9.44e-73 241
Msa0959170 MtrunA17_Chr2g0310401 32.710 428 283 4 130 554 5 430 1.42e-70 233
Msa0959170 MtrunA17_Chr3g0108941 29.307 505 345 9 54 550 13 513 1.86e-69 232
Msa0959170 MtrunA17_Chr7g0236921 63.291 158 54 1 403 556 1 158 2.07e-69 220
Msa0959170 MtrunA17_Chr3g0105691 29.979 487 334 6 54 534 46 531 2.70e-68 230
Msa0959170 MtrunA17_Chr3g0109031 29.592 490 332 8 54 534 13 498 4.85e-68 228
Msa0959170 MtrunA17_Chr3g0109001 29.835 486 327 8 54 529 13 494 1.30e-67 227
Msa0959170 MtrunA17_Chr3g0109021 29.897 485 327 8 54 529 13 493 1.65e-67 227
Msa0959170 MtrunA17_Chr6g0477111 29.314 481 328 7 68 539 1 478 3.17e-66 223
Msa0959170 MtrunA17_Chr3g0099031 29.365 504 345 9 54 550 13 512 1.51e-65 222
Msa0959170 MtrunA17_Chr3g0108981 29.299 471 322 5 68 529 1 469 1.67e-65 221
Msa0959170 MtrunA17_Chr3g0108961 29.299 471 322 5 68 529 1 469 1.67e-65 221
Msa0959170 MtrunA17_Chr3g0108991 29.098 488 337 8 54 534 13 498 3.29e-65 221
Msa0959170 MtrunA17_Chr3g0108951 29.098 488 337 8 54 534 13 498 3.29e-65 221
Msa0959170 MtrunA17_Chr7g0236931 60.390 154 58 1 403 556 1 151 6.96e-64 206
Msa0959170 MtrunA17_Chr3g0108971 28.692 474 330 7 68 534 1 473 1.15e-63 216
Msa0959170 MtrunA17_Chr3g0109011 28.571 476 328 7 68 534 1 473 2.21e-63 215
Msa0959170 MtrunA17_Chr7g0236981 65.926 135 43 1 1 135 1 132 1.97e-57 188
Msa0959170 MtrunA17_Chr6g0477121 28.889 405 277 6 133 529 10 411 1.08e-55 193
Msa0959170 MtrunA17_Chr7g0233861 63.704 135 40 1 196 330 33 158 2.69e-52 176
Msa0959170 MtrunA17_Chr7g0217361 32.558 301 202 1 255 554 8 308 3.91e-48 169
Msa0959170 MtrunA17_Chr8g0357221 35.341 249 154 4 10 257 48 290 1.38e-39 145
Msa0959170 MtrunA17_Chr5g0445521 64.286 98 35 0 1 98 1 98 4.19e-39 138
Msa0959170 MtrunA17_Chr3g0101681 25.769 520 336 15 70 554 276 780 1.59e-37 148
Msa0959170 MtrunA17_Chr2g0310121 24.521 522 340 16 70 554 275 779 9.79e-36 142
Msa0959170 MtrunA17_Chr5g0445401 70.526 95 24 2 166 257 1 94 1.79e-34 125
Msa0959170 MtrunA17_Chr8g0357231 29.457 258 180 2 298 554 1 257 5.44e-34 129
Msa0959170 MtrunA17_Chr3g0082711 48.276 116 43 1 441 556 1 99 6.31e-32 118
Msa0959170 MtrunA17_Chr7g0259881 27.273 275 168 6 68 313 227 498 1.98e-24 107
Msa0959170 MtrunA17_Chr7g0218001 29.927 274 160 6 68 310 344 616 3.77e-24 107
Msa0959170 MtrunA17_Chr7g0217351 29.167 216 146 4 46 258 62 273 2.23e-21 94.7
Msa0959170 MtrunA17_Chr2g0281651 23.476 328 237 9 233 554 43 362 1.44e-19 91.3
Msa0959170 MtrunA17_Chr7g0218041 30.802 237 139 6 120 332 3 238 3.96e-15 77.8
Msa0959170 MtrunA17_Chr2g0310411 31.967 122 75 3 10 131 51 164 1.95e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959170 AT5G23960.2 39.564 551 318 7 13 556 3 545 3.95e-144 427
Msa0959170 AT5G23960.1 39.531 554 316 9 13 556 3 547 5.66e-143 424
Msa0959170 AT1G70080.1 37.163 557 340 7 8 556 57 611 2.69e-131 396
Msa0959170 AT3G14490.1 37.546 546 331 5 17 556 60 601 1.82e-126 384
Msa0959170 AT3G14520.1 36.599 541 333 5 22 556 68 604 2.07e-126 384
Msa0959170 AT1G31950.3 36.314 548 326 6 22 556 70 607 2.38e-125 381
Msa0959170 AT1G31950.1 36.599 541 333 5 22 556 70 606 1.10e-124 379
Msa0959170 AT3G14540.1 36.852 540 333 4 22 556 65 601 6.13e-124 377
Msa0959170 AT3G29410.1 35.424 542 346 3 17 556 64 603 5.06e-118 362
Msa0959170 AT3G32030.1 34.444 540 346 6 22 556 68 604 2.33e-116 357
Msa0959170 AT5G44630.1 35.963 545 338 8 18 554 14 555 1.07e-115 354
Msa0959170 AT4G20210.1 34.672 548 345 7 17 556 58 600 1.11e-115 355
Msa0959170 AT4G13300.1 35.250 539 338 7 25 556 20 554 1.21e-113 349
Msa0959170 AT1G33750.1 34.019 535 347 4 24 556 73 603 2.60e-113 350
Msa0959170 AT4G20200.1 35.521 518 320 8 48 556 92 604 1.82e-112 347
Msa0959170 AT3G29410.2 35.800 500 317 3 59 556 1 498 2.00e-112 344
Msa0959170 AT4G15870.1 35.305 541 324 10 25 556 75 598 1.95e-108 337
Msa0959170 AT4G13280.2 34.637 537 340 7 27 556 22 554 3.53e-108 335
Msa0959170 AT1G31950.2 36.933 463 269 6 22 471 70 522 5.72e-106 328
Msa0959170 AT3G14540.2 37.892 446 270 3 22 463 65 507 1.51e-105 327
Msa0959170 AT3G29190.1 33.141 519 331 7 48 556 89 601 3.11e-105 328
Msa0959170 AT4G20230.1 33.147 537 345 8 25 552 70 601 1.46e-102 322
Msa0959170 AT4G20230.2 33.147 537 345 8 25 552 82 613 2.00e-102 322
Msa0959170 AT3G29110.1 34.559 544 347 8 17 554 55 595 2.07e-102 321
Msa0959170 AT2G23230.2 34.249 546 344 9 16 551 55 595 2.38e-102 322
Msa0959170 AT2G23230.1 34.066 546 340 10 16 551 55 590 5.21e-100 315
Msa0959170 AT1G66020.1 32.418 546 360 6 17 556 56 598 1.29e-98 311
Msa0959170 AT1G48800.1 32.418 546 353 9 17 552 63 602 9.13e-97 306
Msa0959170 AT4G13280.1 33.706 537 315 9 27 556 22 524 2.37e-96 303
Msa0959170 AT4G16730.1 32.197 528 336 9 42 554 17 537 1.02e-94 299
Msa0959170 AT4G16730.2 32.265 499 317 8 73 556 1 493 3.80e-91 289
Msa0959170 AT4G16740.1 31.655 556 353 13 14 556 23 564 1.02e-88 285
Msa0959170 AT1G61680.1 32.265 499 326 4 54 546 77 569 4.30e-88 283
Msa0959170 AT2G24210.1 31.250 560 364 11 10 556 39 590 2.81e-87 281
Msa0959170 AT1G61680.2 31.864 499 321 5 54 546 77 562 1.00e-84 274
Msa0959170 AT1G48820.1 31.169 539 321 11 17 549 63 557 2.51e-84 273
Msa0959170 AT5G48110.1 37.609 343 209 5 215 556 1 339 2.75e-84 266
Msa0959170 AT3G25820.1 29.730 555 372 12 15 556 45 594 8.60e-80 262
Msa0959170 AT3G25830.1 29.730 555 372 12 15 556 45 594 8.60e-80 262
Msa0959170 AT3G25810.1 30.427 562 362 12 15 556 45 597 4.65e-79 260
Msa0959170 AT4G16740.2 34.301 379 228 8 14 381 23 391 4.29e-69 228
Msa0959170 AT1G66020.2 34.417 369 233 6 17 379 56 421 1.21e-67 225
Msa0959170 AT3G25820.2 31.414 382 251 8 15 389 45 422 3.66e-61 209
Msa0959170 AT4G16740.4 34.451 328 195 7 14 330 23 341 1.38e-58 199
Msa0959170 AT4G16740.3 34.451 328 195 7 14 330 23 341 1.38e-58 199
Msa0959170 AT3G25820.4 31.988 322 210 6 15 330 45 363 1.65e-53 187
Msa0959170 AT3G25820.3 31.988 322 210 6 15 330 45 363 1.65e-53 187
Msa0959170 AT1G79460.1 24.525 526 338 20 70 556 274 779 1.72e-31 130
Msa0959170 AT1G61120.1 23.715 506 356 10 71 556 289 784 8.72e-28 119
Msa0959170 AT4G02780.1 28.846 260 157 5 68 300 329 587 8.48e-23 103

Find 94 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTGCTGTGCTATTT+AGG 0.103456 6_3:-75560217 Msa0959170:CDS
TCTACTTGCATTGGCAAAAT+TGG 0.119753 6_3:-75559241 Msa0959170:CDS
AATAAATACTCAAATTTCTA+TGG 0.184094 6_3:+75557049 None:intergenic
TTCTCTTGCTGTGCTATTTA+GGG 0.189824 6_3:-75560216 Msa0959170:CDS
TCCTTATGCTTCAGATTCTA+TGG 0.234780 6_3:-75560828 Msa0959170:intron
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_3:+75558968 None:intergenic
ATGCAAGTAGAATTTCATTA+TGG 0.248221 6_3:+75559253 None:intergenic
AGCCTACATCAAAAGGAATT+TGG 0.257080 6_3:-75559201 Msa0959170:CDS
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_3:-75560266 Msa0959170:CDS
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_3:-75557485 Msa0959170:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_3:-75560297 Msa0959170:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_3:+75558926 None:intergenic
TGCAAAACCGATTTCTCATT+AGG 0.335406 6_3:+75560899 None:intergenic
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6_3:-75558563 Msa0959170:CDS
TGAGGGAATATGATTTGAAT+AGG 0.340079 6_3:-75557283 Msa0959170:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_3:+75559529 None:intergenic
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6_3:-75559013 Msa0959170:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_3:-75557491 Msa0959170:CDS
TGTGCCGCAGTATTCATATC+AGG 0.354426 6_3:+75560437 None:intergenic
CATCAATCCTAATGAGAAAT+CGG 0.381109 6_3:-75560906 Msa0959170:CDS
TGCAAGTAGAATTTCATTAT+GGG 0.387262 6_3:+75559254 None:intergenic
CGTACTTAGAATGTTATATG+AGG 0.388941 6_3:-75557301 Msa0959170:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6_3:+75559275 None:intergenic
GATTGACTCGATATGTCGTT+TGG 0.393872 6_3:-75560339 Msa0959170:CDS
TAAAGCAACTTCGTGTAATC+CGG 0.404734 6_3:+75558544 None:intergenic
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_3:-75558530 Msa0959170:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_3:+75557630 None:intergenic
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_3:-75557238 Msa0959170:CDS
TTCTGGTCACCTTGAGTCCA+TGG 0.446304 6_3:-75559397 Msa0959170:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_3:-75557484 Msa0959170:CDS
GCTCCAAAGCCTACATCAAA+AGG 0.450495 6_3:-75559208 Msa0959170:CDS
TAGGTGGGATATTAATTGCT+TGG 0.452782 6_3:-75558575 Msa0959170:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6_3:-75557571 Msa0959170:CDS
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6_3:+75557656 None:intergenic
CAGATTTCCACCCTAGCGTA+TGG 0.460138 6_3:-75560865 Msa0959170:CDS
TAATGAAATTCTACTTGCAT+TGG 0.460272 6_3:-75559250 Msa0959170:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_3:-75557570 Msa0959170:CDS
GATGACACATATGATGCATA+TGG 0.467097 6_3:-75558909 Msa0959170:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_3:-75558490 Msa0959170:CDS
AAACAGTTTGAGCAGAAAAG+AGG 0.472567 6_3:-75557335 Msa0959170:intron
GAGGGAATATGATTTGAATA+GGG 0.475500 6_3:-75557282 Msa0959170:CDS
ATAAATACTCAAATTTCTAT+GGG 0.482609 6_3:+75557050 None:intergenic
TTGCAAGAGAAGGACTCAAT+CGG 0.484754 6_3:+75559370 None:intergenic
ATTGACTCGATATGTCGTTT+GGG 0.487347 6_3:-75560338 Msa0959170:CDS
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_3:-75557222 Msa0959170:CDS
TTGAGAACACACGTAAGAAT+AGG 0.491590 6_3:+75557170 None:intergenic
ATATTGGGGCTCAAAATATA+CGG 0.495144 6_3:+75558983 None:intergenic
CTGTGCTATTTAGGGTGTTG+AGG 0.502767 6_3:-75560208 Msa0959170:CDS
ACCATAGAATCTGAAGCATA+AGG 0.512185 6_3:+75560827 None:intergenic
CATGGACTTTACGTTTCACC+TGG 0.512238 6_3:-75560182 Msa0959170:intron
AGGACTCAATCGGGTGGCCA+TGG 0.512884 6_3:+75559380 None:intergenic
AGATGTGTTCAACCAATTCA+AGG 0.513117 6_3:-75559541 Msa0959170:CDS
CGACAAAAGACATCTTTGAC+TGG 0.519009 6_3:-75557539 Msa0959170:CDS
TAACTTCTTGCCACTAGCCT+AGG 0.521919 6_3:+75559303 None:intergenic
GCCTCACATATGATGGTTCA+TGG 0.522278 6_3:-75559453 Msa0959170:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_3:+75557582 None:intergenic
ATATAGGTGGTGGAAGGAGT+TGG 0.524102 6_3:-75559069 Msa0959170:intron
TGAATTAGAACTCTTTACTC+AGG 0.528343 6_3:-75558877 Msa0959170:CDS
GTGGGATATTAATTGCTTGG+AGG 0.529634 6_3:-75558572 Msa0959170:CDS
TGGCCTCACTCATATAAGCT+TGG 0.531321 6_3:+75557676 None:intergenic
AACAATGGTCAGAGATGTTG+AGG 0.533818 6_3:-75559496 Msa0959170:CDS
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_3:+75558969 None:intergenic
AGATTTCCACCCTAGCGTAT+GGG 0.542999 6_3:-75560864 Msa0959170:CDS
TGCAAGAGAAGGACTCAATC+GGG 0.546913 6_3:+75559371 None:intergenic
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_3:-75558971 Msa0959170:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6_3:-75557671 Msa0959170:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_3:-75560200 Msa0959170:CDS
TTTACTTGTGTTGCAAGAGA+AGG 0.558925 6_3:+75559360 None:intergenic
ATCGGGTGGCCATGGACTCA+AGG 0.566605 6_3:+75559388 None:intergenic
GTATGAAGCCTCACATATGA+TGG 0.567934 6_3:-75559460 Msa0959170:CDS
ATAGGTAACGGAACATCAGT+TGG 0.569838 6_3:+75557188 None:intergenic
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_3:-75557595 Msa0959170:CDS
ATAGCACAGCAAGAGAATGA+AGG 0.572946 6_3:+75560222 None:intergenic
GTACTTAGAATGTTATATGA+GGG 0.573263 6_3:-75557300 Msa0959170:CDS
GATTTCCACCCTAGCGTATG+GGG 0.586157 6_3:-75560863 Msa0959170:CDS
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_3:-75557576 Msa0959170:CDS
TCTTTACTCAGGCAATTGAA+AGG 0.586966 6_3:-75558866 Msa0959170:intron
CTTTATATATAGGTGGTGGA+AGG 0.588928 6_3:-75559075 Msa0959170:intron
ACTACTCTATCTCGTGCATA+CGG 0.590301 6_3:+75559029 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_3:-75557609 Msa0959170:CDS
AATCTCCCCATACGCTAGGG+TGG 0.601357 6_3:+75560858 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_3:-75557110 Msa0959170:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_3:+75557583 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_3:-75559531 Msa0959170:CDS
AGGAAACTTCAGTGAAACAA+TGG 0.623863 6_3:-75559511 Msa0959170:CDS
GACAAAAGACATCTTTGACT+GGG 0.626667 6_3:-75557538 Msa0959170:CDS
ACCATGAACCATCATATGTG+AGG 0.634158 6_3:+75559452 None:intergenic
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_3:-75557679 Msa0959170:CDS
ACAATGGTCAGAGATGTTGA+GGG 0.666287 6_3:-75559495 Msa0959170:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.675331 6_3:-75557463 Msa0959170:intron
ACACACGTAAGAATAGGTAA+CGG 0.686084 6_3:+75557176 None:intergenic
AAGAGAAGGACTCAATCGGG+TGG 0.695745 6_3:+75559374 None:intergenic
GGAACCTGATATGAATACTG+CGG 0.696636 6_3:-75560441 Msa0959170:CDS
TAACTATATACCAACAACAG+AGG 0.703519 6_3:-75557640 Msa0959170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTAATAAAAATTAC+AGG + chr6_3:75558028-75558047 None:intergenic 10.0%
!! TGATTATAAAGTAATATTAA+TGG - chr6_3:75558227-75558246 Msa0959170:intron 10.0%
!!! TATTTTTTGTCTTTATATAT+AGG - chr6_3:75558896-75558915 Msa0959170:CDS 10.0%
!!! ATTTCATTTTAAATTTTGTA+TGG - chr6_3:75559650-75559669 Msa0959170:intron 10.0%
!!! CATTAATTTTTATTCTTTTA+TGG + chr6_3:75560027-75560046 None:intergenic 10.0%
!! AATATAAAATAAACGTTAAT+AGG + chr6_3:75560256-75560275 None:intergenic 10.0%
!! AAAAAAAAAAAGACCATTTA+AGG + chr6_3:75557262-75557281 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG + chr6_3:75557402-75557421 None:intergenic 15.0%
!! ACAAATTGATAAACTAAAAA+AGG - chr6_3:75557564-75557583 Msa0959170:CDS 15.0%
!! TTGAGTAAAACAAATTATAT+TGG - chr6_3:75557887-75557906 Msa0959170:intron 15.0%
!! TAATATGAATGTCTAAAAAA+TGG - chr6_3:75557988-75558007 Msa0959170:intron 15.0%
!!! ATACTTTTATATTTTGATGT+AGG + chr6_3:75558834-75558853 None:intergenic 15.0%
!! ATAAAGACAAAAAATAGTAT+AGG + chr6_3:75558892-75558911 None:intergenic 15.0%
!!! TTGTAATCAAAATGATTTTT+AGG - chr6_3:75559387-75559406 Msa0959170:CDS 15.0%
!!! AATCATTTTTACATCTTTTT+AGG - chr6_3:75559751-75559770 Msa0959170:intron 15.0%
!! TTGTAGAATTAATATTACAA+AGG + chr6_3:75560131-75560150 None:intergenic 15.0%
!! TTAACAACATTTAATTACAT+AGG - chr6_3:75560214-75560233 Msa0959170:CDS 15.0%
!!! TTTAATTACATAGGTTTTTT+TGG - chr6_3:75560223-75560242 Msa0959170:CDS 15.0%
!! AATTGATAAACTAAAAAAGG+AGG - chr6_3:75557567-75557586 Msa0959170:CDS 20.0%
!! ATGTGAACATTACAAATATA+AGG + chr6_3:75558142-75558161 None:intergenic 20.0%
!! GAGAATAATTAAAAGAATTG+AGG + chr6_3:75558165-75558184 None:intergenic 20.0%
!! AATATTAATGGTATACATGT+AGG - chr6_3:75558239-75558258 Msa0959170:intron 20.0%
!!! ATTGTTGTTTAATATTATCG+TGG - chr6_3:75558399-75558418 Msa0959170:intron 20.0%
!!! TTTTTGTCTTTATATATAGG+TGG - chr6_3:75558899-75558918 Msa0959170:CDS 20.0%
!!! ATTGTTTTATCTCTAAAGTT+TGG + chr6_3:75559187-75559206 None:intergenic 20.0%
!!! TTCTTTTAACAATAGAGTAA+TGG - chr6_3:75559358-75559377 Msa0959170:CDS 20.0%
!!! TAATCAAAATGATTTTTAGG+TGG - chr6_3:75559390-75559409 Msa0959170:CDS 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG - chr6_3:75559391-75559410 Msa0959170:CDS 20.0%
!! TGTAAAAAACTTATTATCCA+TGG - chr6_3:75559890-75559909 Msa0959170:intron 20.0%
!!! TATCTTGACATTTTAATTAG+TGG - chr6_3:75560157-75560176 Msa0959170:intron 20.0%
! AATTCTTTAAATCAACAGCA+AGG - chr6_3:75557181-75557200 Msa0959170:CDS 25.0%
!! ATGACACTTAATTGTTGTTA+TGG + chr6_3:75557475-75557494 None:intergenic 25.0%
!!! TGTATGTTTTGAATACATAC+AGG - chr6_3:75557519-75557538 Msa0959170:CDS 25.0%
!! AGACGAAATTAATCAAGTTT+TGG - chr6_3:75557684-75557703 Msa0959170:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG - chr6_3:75557715-75557734 Msa0959170:intron 25.0%
!! TAAGTTGAGATATATATACC+AGG + chr6_3:75557820-75557839 None:intergenic 25.0%
!! GTAATATTTGACTTTGTCAT+GGG - chr6_3:75557959-75557978 Msa0959170:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG + chr6_3:75558730-75558749 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG + chr6_3:75558731-75558750 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG - chr6_3:75558731-75558750 Msa0959170:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG + chr6_3:75559058-75559077 None:intergenic 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG + chr6_3:75559536-75559555 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG + chr6_3:75559537-75559556 None:intergenic 25.0%
!! AAATTTTGTATGGTTATCGA+AGG - chr6_3:75559660-75559679 Msa0959170:intron 25.0%
!! AATTTTGTATGGTTATCGAA+GGG - chr6_3:75559661-75559680 Msa0959170:intron 25.0%
!! AAAGTATCACTATAATGACT+TGG - chr6_3:75559786-75559805 Msa0959170:intron 25.0%
!! TCATGAAGATACATTTTTCT+TGG + chr6_3:75559812-75559831 None:intergenic 25.0%
!!! TATCCATGGTTTTATTAACT+CGG - chr6_3:75559904-75559923 Msa0959170:intron 25.0%
! AAGAAAAATGTATCATCATG+AGG - chr6_3:75559966-75559985 Msa0959170:intron 25.0%
! TGCAAAAAACTTATTATCCA+TGG - chr6_3:75560045-75560064 Msa0959170:intron 25.0%
!! CATAATAAGTTGACATAATG+AGG - chr6_3:75560570-75560589 Msa0959170:intron 25.0%
! GTACTTAGAATGTTATATGA+GGG - chr6_3:75560681-75560700 Msa0959170:intron 25.0%
CATCAATCCTAATGAGAAAT+CGG - chr6_3:75557075-75557094 Msa0959170:CDS 30.0%
ACGCATAACAAAACCTTAAA+TGG - chr6_3:75557246-75557265 Msa0959170:CDS 30.0%
GGAATGAAACTTGATATTCT+AGG - chr6_3:75557297-75557316 Msa0959170:CDS 30.0%
AATCCTGAGCTAATATTAAG+TGG + chr6_3:75557362-75557381 None:intergenic 30.0%
!!! ATCAAGTTGACTTTTTCCAT+GGG + chr6_3:75557625-75557644 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+TGG + chr6_3:75557626-75557645 None:intergenic 30.0%
! CGTAATATTTGACTTTGTCA+TGG - chr6_3:75557958-75557977 Msa0959170:intron 30.0%
TAAAAATTACAGGCTAACAG+TGG + chr6_3:75558018-75558037 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG - chr6_3:75558542-75558561 Msa0959170:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG - chr6_3:75558548-75558567 Msa0959170:CDS 30.0%
! TTCCAAATTCCTTTTGATGT+AGG + chr6_3:75558785-75558804 None:intergenic 30.0%
TTGTCTTTATATATAGGTGG+TGG - chr6_3:75558902-75558921 Msa0959170:CDS 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG - chr6_3:75558969-75558988 Msa0959170:CDS 30.0%
ATATTGGGGCTCAAAATATA+CGG + chr6_3:75559001-75559020 None:intergenic 30.0%
TTTCCTTGCTTGAGAATATT+GGG + chr6_3:75559016-75559035 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG + chr6_3:75559017-75559036 None:intergenic 30.0%
TGAATTAGAACTCTTTACTC+AGG - chr6_3:75559104-75559123 Msa0959170:intron 30.0%
AATTTACCCATCTTCAATCT+TGG - chr6_3:75559270-75559289 Msa0959170:CDS 30.0%
! GTTGCTTTATAAATCACTCT+TGG - chr6_3:75559451-75559470 Msa0959170:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG + chr6_3:75559535-75559554 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG - chr6_3:75560341-75560360 Msa0959170:CDS 30.0%
CACATATCAACAATATCAAG+TGG - chr6_3:75560372-75560391 Msa0959170:CDS 30.0%
CGTACTTAGAATGTTATATG+AGG - chr6_3:75560680-75560699 Msa0959170:intron 30.0%
TGAGGGAATATGATTTGAAT+AGG - chr6_3:75560698-75560717 Msa0959170:intron 30.0%
GAGGGAATATGATTTGAATA+GGG - chr6_3:75560699-75560718 Msa0959170:intron 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG + chr6_3:75560731-75560750 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG + chr6_3:75560744-75560763 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG - chr6_3:75560743-75560762 Msa0959170:intron 30.0%
! TGCAAAACCGATTTCTCATT+AGG + chr6_3:75557085-75557104 None:intergenic 35.0%
TCCTTATGCTTCAGATTCTA+TGG - chr6_3:75557153-75557172 Msa0959170:CDS 35.0%
! ACCATAGAATCTGAAGCATA+AGG + chr6_3:75557157-75557176 None:intergenic 35.0%
CTGAGCTAATATTAAGTGGT+TGG + chr6_3:75557358-75557377 None:intergenic 35.0%
CAACCACTTAATATTAGCTC+AGG - chr6_3:75557356-75557375 Msa0959170:intron 35.0%
! TTTTGCTAAATGCAGTCCAT+AGG - chr6_3:75557444-75557463 Msa0959170:intron 35.0%
TGTTGTTATGGATCAACCTA+TGG + chr6_3:75557463-75557482 None:intergenic 35.0%
!! ATTGACTCGATATGTCGTTT+GGG - chr6_3:75557643-75557662 Msa0959170:CDS 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG - chr6_3:75557764-75557783 Msa0959170:intron 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG - chr6_3:75557765-75557784 Msa0959170:intron 35.0%
GGAGTTGTCTAATATGTATC+CGG + chr6_3:75558121-75558140 None:intergenic 35.0%
AGATGTGTTCAACCAATTCA+AGG - chr6_3:75558440-75558459 Msa0959170:intron 35.0%
AGGAAACTTCAGTGAAACAA+TGG - chr6_3:75558470-75558489 Msa0959170:CDS 35.0%
! AAAAATATTGGAAGAGGCGT+TGG - chr6_3:75558554-75558573 Msa0959170:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG + chr6_3:75558624-75558643 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG - chr6_3:75558740-75558759 Msa0959170:intron 35.0%
! ATTCCTTTTGATGTAGGCTT+TGG + chr6_3:75558779-75558798 None:intergenic 35.0%
AGCCTACATCAAAAGGAATT+TGG - chr6_3:75558780-75558799 Msa0959170:intron 35.0%
!! CTTTATATATAGGTGGTGGA+AGG - chr6_3:75558906-75558925 Msa0959170:CDS 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG - chr6_3:75558968-75558987 Msa0959170:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG + chr6_3:75559015-75559034 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG - chr6_3:75559072-75559091 Msa0959170:intron 35.0%
TCTTTACTCAGGCAATTGAA+AGG - chr6_3:75559115-75559134 Msa0959170:intron 35.0%
! CTAGTCATCAAGTTTAGAGT+TGG - chr6_3:75559225-75559244 Msa0959170:CDS 35.0%
TAGCAACCAAGATTGAAGAT+GGG + chr6_3:75559279-75559298 None:intergenic 35.0%
TTAGCAACCAAGATTGAAGA+TGG + chr6_3:75559280-75559299 None:intergenic 35.0%
TAGGTGGGATATTAATTGCT+TGG - chr6_3:75559406-75559425 Msa0959170:CDS 35.0%
TAAAGCAACTTCGTGTAATC+CGG + chr6_3:75559440-75559459 None:intergenic 35.0%
GAGCAAGAAATGAAGAAAGA+AGG - chr6_3:75559491-75559510 Msa0959170:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG + chr6_3:75559528-75559547 None:intergenic 35.0%
GAACCGAGTTAATAAAACCA+TGG + chr6_3:75559910-75559929 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG - chr6_3:75560302-75560321 Msa0959170:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG - chr6_3:75560410-75560429 Msa0959170:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG - chr6_3:75560411-75560430 Msa0959170:CDS 35.0%
GACAAAAGACATCTTTGACT+GGG - chr6_3:75560443-75560462 Msa0959170:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG + chr6_3:75560480-75560499 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG - chr6_3:75560646-75560665 Msa0959170:intron 35.0%
CGCTTGGAAAGATATAAATC+AGG - chr6_3:75560759-75560778 Msa0959170:intron 35.0%
ACACACGTAAGAATAGGTAA+CGG + chr6_3:75560808-75560827 None:intergenic 35.0%
TTGAGAACACACGTAAGAAT+AGG + chr6_3:75560814-75560833 None:intergenic 35.0%
AAAAATCTCCCCATACGCTA+GGG + chr6_3:75557129-75557148 None:intergenic 40.0%
AAAAAATCTCCCCATACGCT+AGG + chr6_3:75557130-75557149 None:intergenic 40.0%
GGAACCTGATATGAATACTG+CGG - chr6_3:75557540-75557559 Msa0959170:CDS 40.0%
CTCAAAAACAGAGAAACCCA+TGG - chr6_3:75557606-75557625 Msa0959170:CDS 40.0%
!! GATTGACTCGATATGTCGTT+TGG - chr6_3:75557642-75557661 Msa0959170:CDS 40.0%
ATAGCACAGCAAGAGAATGA+AGG + chr6_3:75557762-75557781 None:intergenic 40.0%
!! AAGAGTGTCTTTCGTTTGAC+CGG - chr6_3:75558099-75558118 Msa0959170:intron 40.0%
!! GTGTTTCTGAAGTGCGAAAA+AGG + chr6_3:75558282-75558301 None:intergenic 40.0%
AACAATGGTCAGAGATGTTG+AGG - chr6_3:75558485-75558504 Msa0959170:CDS 40.0%
ACAATGGTCAGAGATGTTGA+GGG - chr6_3:75558486-75558505 Msa0959170:CDS 40.0%
GTATGAAGCCTCACATATGA+TGG - chr6_3:75558521-75558540 Msa0959170:CDS 40.0%
ACCATGAACCATCATATGTG+AGG + chr6_3:75558532-75558551 None:intergenic 40.0%
TTGCAAGAGAAGGACTCAAT+CGG + chr6_3:75558614-75558633 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG + chr6_3:75558709-75558728 None:intergenic 40.0%
ACTACTCTATCTCGTGCATA+CGG + chr6_3:75558955-75558974 None:intergenic 40.0%
GTGGGATATTAATTGCTTGG+AGG - chr6_3:75559409-75559428 Msa0959170:CDS 40.0%
TAATTGCTTGGAGGATCTTC+CGG - chr6_3:75559418-75559437 Msa0959170:CDS 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG + chr6_3:75559529-75559548 None:intergenic 40.0%
TGGTTATCGAAGGGAAGTTT+AGG - chr6_3:75559670-75559689 Msa0959170:intron 40.0%
GAACTGAGTTCAGATAACCA+TGG + chr6_3:75560065-75560084 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG + chr6_3:75560328-75560347 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG - chr6_3:75560405-75560424 Msa0959170:CDS 40.0%
CGACAAAAGACATCTTTGAC+TGG - chr6_3:75560442-75560461 Msa0959170:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG - chr6_3:75560497-75560516 Msa0959170:intron 40.0%
!! ATAGGTAACGGAACATCAGT+TGG + chr6_3:75560796-75560815 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG - chr6_3:75560831-75560850 Msa0959170:CDS 40.0%
GATAACTACACACACTCTGA+CGG - chr6_3:75560871-75560890 Msa0959170:CDS 40.0%
AGATTTCCACCCTAGCGTAT+GGG - chr6_3:75557117-75557136 Msa0959170:CDS 45.0%
TGTGCCGCAGTATTCATATC+AGG + chr6_3:75557547-75557566 None:intergenic 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG - chr6_3:75557773-75557792 Msa0959170:intron 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG - chr6_3:75557781-75557800 Msa0959170:intron 45.0%
CATGGACTTTACGTTTCACC+TGG - chr6_3:75557799-75557818 Msa0959170:intron 45.0%
AACCAATTCAAGGACGAGCA+AGG - chr6_3:75558450-75558469 Msa0959170:intron 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG + chr6_3:75558455-75558474 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG - chr6_3:75558528-75558547 Msa0959170:CDS 45.0%
TGCAAGAGAAGGACTCAATC+GGG + chr6_3:75558613-75558632 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG - chr6_3:75558668-75558687 Msa0959170:intron 45.0%
! TAACTTCTTGCCACTAGCCT+AGG + chr6_3:75558681-75558700 None:intergenic 45.0%
GCTCCAAAGCCTACATCAAA+AGG - chr6_3:75558773-75558792 Msa0959170:intron 45.0%
!! ATATAGGTGGTGGAAGGAGT+TGG - chr6_3:75558912-75558931 Msa0959170:CDS 45.0%
AGCCCCAATATTCTCAAGCA+AGG - chr6_3:75559010-75559029 Msa0959170:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG + chr6_3:75560308-75560327 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG - chr6_3:75560310-75560329 Msa0959170:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG + chr6_3:75560354-75560373 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG - chr6_3:75560386-75560405 Msa0959170:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG + chr6_3:75560401-75560420 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG + chr6_3:75560402-75560421 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG - chr6_3:75560490-75560509 Msa0959170:intron 45.0%
CTGCTATACATTGCAGGCTT+AGG - chr6_3:75560496-75560515 Msa0959170:intron 45.0%
GGATGAAATTGTGTCAAGCG+AGG - chr6_3:75560518-75560537 Msa0959170:intron 45.0%
!!! TTTTTTTTTTTTTTATCAAT+AGG - chr6_3:75557276-75557295 Msa0959170:CDS 5.0%
!!! ATTTTTTTTTGTTTTTAATT+TGG - chr6_3:75557856-75557875 Msa0959170:intron 5.0%
CAGATTTCCACCCTAGCGTA+TGG - chr6_3:75557116-75557135 Msa0959170:CDS 50.0%
GATTTCCACCCTAGCGTATG+GGG - chr6_3:75557118-75557137 Msa0959170:CDS 50.0%
!!! GAGGCGTTGGCTTTTACTTC+TGG - chr6_3:75558567-75558586 Msa0959170:CDS 50.0%
TTCTGGTCACCTTGAGTCCA+TGG - chr6_3:75558584-75558603 Msa0959170:intron 50.0%
AAGAGAAGGACTCAATCGGG+TGG + chr6_3:75558610-75558629 None:intergenic 50.0%
CTCTGCGCAAAAACTTGCCT+AGG - chr6_3:75558661-75558680 Msa0959170:intron 50.0%
AATCTCCCCATACGCTAGGG+TGG + chr6_3:75557126-75557145 None:intergenic 55.0%
ATCGGGTGGCCATGGACTCA+AGG + chr6_3:75558596-75558615 None:intergenic 60.0%
AGGACTCAATCGGGTGGCCA+TGG + chr6_3:75558604-75558623 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 75557058 75560945 75557058 ID=Msa0959170;Name=Msa0959170
chr6_3 mRNA 75557058 75560945 75557058 ID=Msa0959170-mRNA-1;Parent=Msa0959170;Name=Msa0959170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|7|0|556
chr6_3 exon 75560829 75560945 75560829 ID=Msa0959170-mRNA-1:exon:13529;Parent=Msa0959170-mRNA-1
chr6_3 exon 75560183 75560462 75560183 ID=Msa0959170-mRNA-1:exon:13528;Parent=Msa0959170-mRNA-1
chr6_3 exon 75559189 75559561 75559189 ID=Msa0959170-mRNA-1:exon:13527;Parent=Msa0959170-mRNA-1
chr6_3 exon 75558867 75559085 75558867 ID=Msa0959170-mRNA-1:exon:13526;Parent=Msa0959170-mRNA-1
chr6_3 exon 75558456 75558594 75558456 ID=Msa0959170-mRNA-1:exon:13525;Parent=Msa0959170-mRNA-1
chr6_3 exon 75557464 75557712 75557464 ID=Msa0959170-mRNA-1:exon:13524;Parent=Msa0959170-mRNA-1
chr6_3 exon 75557058 75557351 75557058 ID=Msa0959170-mRNA-1:exon:13523;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75560829 75560945 75560829 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75560183 75560462 75560183 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75559189 75559561 75559189 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75558867 75559085 75558867 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75558456 75558594 75558456 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75557464 75557712 75557464 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
chr6_3 CDS 75557058 75557351 75557058 ID=Msa0959170-mRNA-1:cds;Parent=Msa0959170-mRNA-1
Gene Sequence

>Msa0959170

ATGTCTTCAGTAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTATGGGGAGATTTTTTCATTCCTTATGCTTCAGATTCTATGGAACCTGATATGAATACTGCGGCACAAATTGATAAACTAAAAAAGGAGGTTAGACAAATGCTTGTCTCAAAAACAGAGAAACCCATGGAAAAAGTCAACTTGATTGACTCGATATGTCGTTTGGGTGTGAGCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCTCTTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTACGTTTCACCTGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACAATGGTCAGAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCGTTGGCTTTTACTTCTGGTCACCTTGAGTCCATGGCCACCCGATTGAGTCCTTCTCTTGCAACACAAGTAAAACAAAGCTTAAGACAATCTCTGCGCAAAAACTTGCCTAGGCTAGTGGCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTGCATTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTACATCAAAAGGAATTTGGAAACATTAGCAAGTGGTGGAAGGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTAGAATGTTGCTTTTGGGTTATGACCGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATATGATGCATATGGAACTATTGATGAATTAGAACTCTTTACTCAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACACGAAGTTGCTTTATAAATCACTCTTGGATGTTTATCAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGACTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTAGAATGTTATATGAGGGAATATGATTTGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGATGTTCCGTTACCTATTCTTACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGATTGATGAAGACATATATTAATGATTTGCTTGTCAATCCCATAGAAATTTGA
Protein sequence

>Msa0959170

MSSVDYINPNEKSVLQRNVADFHPSVWGDFFIPYASDSMEPDMNTAAQIDKLKKEVRQMLVSKTEKPMEKVNLIDSICRLGVSYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSLAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETMVRDVEGMLNLYEASHMMVHGEKILEEALAFTSGHLESMATRLSPSLATQVKQSLRQSLRKNLPRLVARSYISIYEQDSSHNEILLALAKLDFNMLQSLHQKEFGNISKWWKELDIAQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTQAIERWDINCLEDLPDYTKLLYKSLLDVYQEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDLNREAAIQECQKKIDNAWKDINQECLKPTDVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPIEI*