Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959190 | XP_004497487.1 | 73.465 | 505 | 128 | 1 | 1 | 499 | 52 | 556 | 0.0 | 796 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959190 | sp|B9SCB6|TPS2_RICCO | 53.082 | 503 | 226 | 3 | 1 | 497 | 52 | 550 | 0.0 | 568 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0894010 | Msa0959190 | 0.855074 | 8.049389e-62 | -8.615850e-47 |
Msa0894080 | Msa0959190 | 0.814603 | 1.416458e-51 | -8.615850e-47 |
Msa0916290 | Msa0959190 | 0.821294 | 4.359501e-53 | -8.615850e-47 |
Msa0916310 | Msa0959190 | 0.800130 | 1.664978e-48 | -8.615850e-47 |
Msa0920710 | Msa0959190 | 0.876928 | 9.453209e-69 | -8.615850e-47 |
Msa0920720 | Msa0959190 | 0.833716 | 4.544115e-56 | -8.615850e-47 |
Msa0920760 | Msa0959190 | 0.846520 | 2.062683e-59 | -8.615850e-47 |
Msa0920810 | Msa0959190 | 0.819109 | 1.379945e-52 | -8.615850e-47 |
Msa0920820 | Msa0959190 | 0.808990 | 2.360760e-50 | -8.615850e-47 |
Msa0959160 | Msa0959190 | 0.815371 | 9.568263e-52 | -8.615850e-47 |
Msa0959170 | Msa0959190 | 0.880581 | 4.877027e-70 | -8.615850e-47 |
Msa0959180 | Msa0959190 | 0.949977 | 4.247755e-108 | -8.615850e-47 |
Msa0959190 | Msa0959210 | 0.861440 | 1.024465e-63 | -8.615850e-47 |
Msa0959190 | Msa0959280 | 0.933183 | 2.767103e-95 | -8.615850e-47 |
Msa0959190 | Msa0995410 | 0.845103 | 5.002345e-59 | -8.615850e-47 |
Msa0959190 | Msa0995420 | 0.879796 | 9.301820e-70 | -8.615850e-47 |
Msa0959190 | Msa0995430 | 0.825834 | 3.776162e-54 | -8.615850e-47 |
Msa0959190 | Msa0995440 | 0.844869 | 5.787714e-59 | -8.615850e-47 |
Msa0959190 | Msa0995460 | 0.845027 | 5.246631e-59 | -8.615850e-47 |
Msa0959190 | Msa0995470 | 0.883119 | 5.872803e-71 | -8.615850e-47 |
Msa0959190 | Msa0995480 | 0.863990 | 1.676813e-64 | -8.615850e-47 |
Msa0959190 | Msa0995490 | 0.841346 | 5.023219e-58 | -8.615850e-47 |
Msa0959190 | Msa0995500 | 0.861848 | 7.688223e-64 | -8.615850e-47 |
Msa0959190 | Msa0995600 | 0.827103 | 1.882084e-54 | -8.615850e-47 |
Msa0959190 | Msa0995610 | 0.811334 | 7.375769e-51 | -8.615850e-47 |
Msa0959190 | Msa0995620 | 0.822891 | 1.858750e-53 | -8.615850e-47 |
Msa0959190 | Msa0995630 | 0.844410 | 7.690546e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959190 | MtrunA17_Chr7g0236991 | 69.703 | 505 | 147 | 1 | 1 | 499 | 49 | 553 | 0.0 | 753 |
Msa0959190 | MtrunA17_Chr7g0237001 | 69.505 | 505 | 148 | 1 | 1 | 499 | 49 | 553 | 0.0 | 751 |
Msa0959190 | MtrunA17_Chr7g0237041 | 69.505 | 505 | 148 | 1 | 1 | 499 | 49 | 553 | 0.0 | 751 |
Msa0959190 | MtrunA17_Chr7g0237081 | 69.505 | 505 | 148 | 1 | 1 | 499 | 49 | 553 | 0.0 | 751 |
Msa0959190 | MtrunA17_Chr7g0237051 | 69.505 | 505 | 148 | 1 | 1 | 499 | 49 | 553 | 0.0 | 751 |
Msa0959190 | MtrunA17_Chr7g0236961 | 69.679 | 498 | 145 | 1 | 8 | 499 | 1 | 498 | 0.0 | 744 |
Msa0959190 | MtrunA17_Chr6g0466051 | 69.703 | 505 | 147 | 1 | 1 | 499 | 49 | 553 | 0.0 | 744 |
Msa0959190 | MtrunA17_Chr7g0237011 | 69.679 | 498 | 145 | 1 | 8 | 499 | 1 | 498 | 0.0 | 743 |
Msa0959190 | MtrunA17_Chr6g0465911 | 69.505 | 505 | 148 | 1 | 1 | 499 | 49 | 553 | 0.0 | 742 |
Msa0959190 | MtrunA17_Chr6g0465851 | 69.505 | 505 | 148 | 1 | 1 | 499 | 14 | 518 | 0.0 | 742 |
Msa0959190 | MtrunA17_Chr6g0465441 | 67.921 | 505 | 156 | 1 | 1 | 499 | 49 | 553 | 0.0 | 729 |
Msa0959190 | MtrunA17_Chr5g0425371 | 68.119 | 505 | 155 | 1 | 1 | 499 | 49 | 553 | 0.0 | 726 |
Msa0959190 | MtrunA17_Chr6g0451711 | 66.008 | 506 | 165 | 2 | 1 | 499 | 52 | 557 | 0.0 | 712 |
Msa0959190 | MtrunA17_Chr3g0105071 | 65.810 | 506 | 166 | 2 | 1 | 499 | 52 | 557 | 0.0 | 705 |
Msa0959190 | MtrunA17_Chr3g0082691 | 66.008 | 506 | 165 | 2 | 1 | 499 | 48 | 553 | 0.0 | 704 |
Msa0959190 | MtrunA17_Chr4g0024691 | 66.535 | 505 | 163 | 1 | 1 | 499 | 57 | 561 | 0.0 | 703 |
Msa0959190 | MtrunA17_Chr5g0431571 | 65.675 | 504 | 166 | 2 | 1 | 497 | 44 | 547 | 0.0 | 682 |
Msa0959190 | MtrunA17_Chr5g0431651 | 64.103 | 507 | 174 | 3 | 1 | 499 | 46 | 552 | 0.0 | 674 |
Msa0959190 | MtrunA17_Chr4g0042111 | 57.988 | 507 | 205 | 2 | 1 | 499 | 56 | 562 | 0.0 | 622 |
Msa0959190 | MtrunA17_Chr7g0236971 | 68.579 | 401 | 120 | 1 | 105 | 499 | 1 | 401 | 0.0 | 591 |
Msa0959190 | MtrunA17_Chr6g0466111 | 72.308 | 325 | 84 | 1 | 1 | 319 | 14 | 338 | 1.02e-172 | 489 |
Msa0959190 | MtrunA17_Chr6g0465981 | 72.308 | 325 | 84 | 1 | 1 | 319 | 49 | 373 | 2.93e-172 | 489 |
Msa0959190 | MtrunA17_Chr6g0465871 | 72.308 | 325 | 84 | 1 | 1 | 319 | 49 | 373 | 2.93e-172 | 489 |
Msa0959190 | MtrunA17_Chr6g0466081 | 72.308 | 325 | 84 | 1 | 1 | 319 | 49 | 373 | 2.93e-172 | 489 |
Msa0959190 | MtrunA17_Chr6g0465931 | 72.000 | 325 | 85 | 1 | 1 | 319 | 14 | 338 | 1.43e-171 | 486 |
Msa0959190 | MtrunA17_Chr7g0236951 | 71.246 | 313 | 84 | 1 | 8 | 314 | 1 | 313 | 1.96e-167 | 475 |
Msa0959190 | MtrunA17_Chr7g0237031 | 71.246 | 313 | 84 | 1 | 8 | 314 | 1 | 313 | 4.90e-167 | 474 |
Msa0959190 | MtrunA17_Chr8g0336181 | 44.794 | 509 | 268 | 6 | 2 | 499 | 50 | 556 | 1.50e-158 | 462 |
Msa0959190 | MtrunA17_Chr2g0319051 | 43.898 | 508 | 273 | 7 | 2 | 499 | 9 | 514 | 3.98e-157 | 456 |
Msa0959190 | MtrunA17_Chr2g0319041 | 45.098 | 510 | 266 | 9 | 2 | 499 | 50 | 557 | 9.94e-157 | 457 |
Msa0959190 | MtrunA17_Chr6g0466031 | 64.615 | 260 | 92 | 0 | 240 | 499 | 1 | 260 | 5.07e-122 | 357 |
Msa0959190 | MtrunA17_Chr4g0008621 | 45.152 | 361 | 189 | 4 | 2 | 353 | 58 | 418 | 1.14e-109 | 332 |
Msa0959190 | MtrunA17_Chr5g0445511 | 64.286 | 238 | 79 | 1 | 101 | 332 | 2 | 239 | 2.69e-108 | 322 |
Msa0959190 | MtrunA17_Chr7g0237061 | 60.769 | 260 | 79 | 2 | 240 | 499 | 1 | 237 | 5.65e-108 | 321 |
Msa0959190 | MtrunA17_Chr4g0023911 | 34.722 | 504 | 319 | 3 | 1 | 497 | 79 | 579 | 6.58e-107 | 330 |
Msa0959190 | MtrunA17_Chr2g0319071 | 35.771 | 506 | 269 | 11 | 2 | 497 | 28 | 487 | 7.90e-107 | 327 |
Msa0959190 | MtrunA17_Chr2g0323151 | 35.032 | 471 | 285 | 5 | 17 | 477 | 1 | 460 | 2.84e-98 | 305 |
Msa0959190 | MtrunA17_Chr2g0310331 | 36.364 | 506 | 305 | 9 | 1 | 497 | 87 | 584 | 6.49e-98 | 307 |
Msa0959190 | MtrunA17_Chr2g0323131 | 34.221 | 488 | 298 | 7 | 1 | 477 | 70 | 545 | 7.40e-98 | 306 |
Msa0959190 | MtrunA17_Chr7g0237071 | 69.307 | 202 | 56 | 1 | 8 | 203 | 1 | 202 | 5.53e-95 | 287 |
Msa0959190 | MtrunA17_Chr8g0357411 | 33.201 | 503 | 323 | 5 | 3 | 497 | 90 | 587 | 3.95e-88 | 281 |
Msa0959190 | MtrunA17_Chr7g0237021 | 69.186 | 172 | 53 | 0 | 328 | 499 | 1 | 172 | 2.39e-86 | 263 |
Msa0959190 | MtrunA17_Chr7g0236941 | 69.186 | 172 | 53 | 0 | 328 | 499 | 1 | 172 | 2.39e-86 | 263 |
Msa0959190 | MtrunA17_Chr4g0048921 | 32.406 | 503 | 325 | 6 | 5 | 497 | 72 | 569 | 3.36e-84 | 271 |
Msa0959190 | MtrunA17_Chr6g0465941 | 64.535 | 172 | 61 | 0 | 328 | 499 | 1 | 172 | 3.78e-79 | 244 |
Msa0959190 | MtrunA17_Chr6g0466121 | 64.535 | 172 | 61 | 0 | 328 | 499 | 1 | 172 | 3.78e-79 | 244 |
Msa0959190 | MtrunA17_Chr6g0465991 | 64.535 | 172 | 61 | 0 | 328 | 499 | 1 | 172 | 3.78e-79 | 244 |
Msa0959190 | MtrunA17_Chr6g0466091 | 64.535 | 172 | 61 | 0 | 328 | 499 | 1 | 172 | 3.78e-79 | 244 |
Msa0959190 | MtrunA17_Chr6g0465881 | 63.953 | 172 | 62 | 0 | 328 | 499 | 1 | 172 | 2.05e-78 | 243 |
Msa0959190 | MtrunA17_Chr4g0048911 | 30.261 | 499 | 334 | 7 | 4 | 491 | 61 | 556 | 1.78e-77 | 253 |
Msa0959190 | MtrunA17_Chr2g0319081 | 39.755 | 327 | 175 | 8 | 176 | 499 | 120 | 427 | 1.99e-76 | 246 |
Msa0959190 | MtrunA17_Chr2g0319081 | 31.461 | 178 | 110 | 3 | 2 | 167 | 57 | 234 | 1.30e-13 | 72.8 |
Msa0959190 | MtrunA17_Chr5g0445501 | 62.791 | 172 | 64 | 0 | 328 | 499 | 1 | 172 | 7.45e-76 | 236 |
Msa0959190 | MtrunA17_Chr6g0466021 | 71.895 | 153 | 37 | 1 | 1 | 147 | 49 | 201 | 2.06e-71 | 225 |
Msa0959190 | MtrunA17_Chr7g0236921 | 64.557 | 158 | 52 | 1 | 346 | 499 | 1 | 158 | 8.54e-71 | 222 |
Msa0959190 | MtrunA17_Chr2g0280581 | 28.429 | 503 | 345 | 7 | 3 | 490 | 16 | 518 | 2.78e-70 | 233 |
Msa0959190 | MtrunA17_Chr2g0310401 | 32.009 | 428 | 280 | 5 | 79 | 497 | 5 | 430 | 9.24e-68 | 224 |
Msa0959190 | MtrunA17_Chr3g0108941 | 29.505 | 505 | 338 | 11 | 3 | 493 | 13 | 513 | 1.36e-67 | 226 |
Msa0959190 | MtrunA17_Chr3g0105691 | 29.569 | 487 | 330 | 7 | 3 | 477 | 46 | 531 | 1.24e-66 | 224 |
Msa0959190 | MtrunA17_Chr3g0109031 | 29.897 | 485 | 321 | 10 | 3 | 472 | 13 | 493 | 2.98e-66 | 222 |
Msa0959190 | MtrunA17_Chr3g0109001 | 30.041 | 486 | 320 | 10 | 3 | 472 | 13 | 494 | 6.77e-66 | 221 |
Msa0959190 | MtrunA17_Chr3g0109021 | 30.103 | 485 | 320 | 10 | 3 | 472 | 13 | 493 | 8.96e-66 | 221 |
Msa0959190 | MtrunA17_Chr7g0236931 | 61.688 | 154 | 56 | 1 | 346 | 499 | 1 | 151 | 2.73e-65 | 207 |
Msa0959190 | MtrunA17_Chr6g0477111 | 29.730 | 481 | 320 | 9 | 17 | 482 | 1 | 478 | 3.49e-64 | 216 |
Msa0959190 | MtrunA17_Chr3g0108981 | 29.724 | 471 | 314 | 7 | 17 | 472 | 1 | 469 | 1.27e-63 | 214 |
Msa0959190 | MtrunA17_Chr3g0108961 | 29.724 | 471 | 314 | 7 | 17 | 472 | 1 | 469 | 1.27e-63 | 214 |
Msa0959190 | MtrunA17_Chr3g0099031 | 29.447 | 506 | 340 | 11 | 1 | 493 | 11 | 512 | 1.70e-63 | 215 |
Msa0959190 | MtrunA17_Chr3g0108991 | 29.400 | 483 | 326 | 10 | 3 | 472 | 13 | 493 | 1.96e-63 | 214 |
Msa0959190 | MtrunA17_Chr3g0108951 | 29.400 | 483 | 326 | 10 | 3 | 472 | 13 | 493 | 1.96e-63 | 214 |
Msa0959190 | MtrunA17_Chr3g0108971 | 28.998 | 469 | 319 | 9 | 17 | 472 | 1 | 468 | 6.32e-62 | 210 |
Msa0959190 | MtrunA17_Chr3g0109011 | 28.238 | 471 | 320 | 8 | 17 | 472 | 1 | 468 | 4.84e-61 | 207 |
Msa0959190 | MtrunA17_Chr6g0477121 | 29.383 | 405 | 269 | 8 | 82 | 472 | 10 | 411 | 6.17e-54 | 187 |
Msa0959190 | MtrunA17_Chr7g0233861 | 63.704 | 135 | 40 | 1 | 139 | 273 | 33 | 158 | 8.65e-53 | 176 |
Msa0959190 | MtrunA17_Chr7g0217361 | 33.000 | 300 | 200 | 1 | 198 | 496 | 8 | 307 | 4.84e-49 | 171 |
Msa0959190 | MtrunA17_Chr3g0101681 | 25.869 | 518 | 332 | 16 | 19 | 497 | 276 | 780 | 2.54e-36 | 143 |
Msa0959190 | MtrunA17_Chr7g0236981 | 70.238 | 84 | 25 | 0 | 1 | 84 | 49 | 132 | 1.89e-35 | 129 |
Msa0959190 | MtrunA17_Chr8g0357231 | 29.457 | 258 | 180 | 2 | 241 | 497 | 1 | 257 | 1.67e-34 | 130 |
Msa0959190 | MtrunA17_Chr2g0310121 | 23.755 | 522 | 338 | 16 | 19 | 497 | 275 | 779 | 2.58e-33 | 134 |
Msa0959190 | MtrunA17_Chr3g0082711 | 50.000 | 116 | 41 | 1 | 384 | 499 | 1 | 99 | 5.31e-33 | 120 |
Msa0959190 | MtrunA17_Chr8g0357221 | 35.610 | 205 | 121 | 3 | 3 | 200 | 90 | 290 | 7.43e-32 | 124 |
Msa0959190 | MtrunA17_Chr5g0445401 | 65.263 | 95 | 23 | 3 | 115 | 200 | 1 | 94 | 8.16e-29 | 109 |
Msa0959190 | MtrunA17_Chr7g0259881 | 25.818 | 275 | 166 | 7 | 17 | 256 | 227 | 498 | 2.49e-20 | 94.7 |
Msa0959190 | MtrunA17_Chr2g0281651 | 23.625 | 309 | 223 | 8 | 176 | 478 | 43 | 344 | 1.98e-19 | 90.5 |
Msa0959190 | MtrunA17_Chr7g0218001 | 28.102 | 274 | 159 | 7 | 17 | 253 | 344 | 616 | 1.08e-18 | 89.7 |
Msa0959190 | MtrunA17_Chr7g0217351 | 28.019 | 207 | 136 | 5 | 4 | 201 | 71 | 273 | 1.84e-17 | 83.2 |
Msa0959190 | MtrunA17_Chr5g0445521 | 65.957 | 47 | 16 | 0 | 1 | 47 | 52 | 98 | 4.77e-15 | 71.2 |
Msa0959190 | MtrunA17_Chr2g0310411 | 40.000 | 80 | 44 | 1 | 1 | 80 | 89 | 164 | 2.55e-12 | 65.1 |
Msa0959190 | MtrunA17_Chr4g0008631 | 36.145 | 83 | 51 | 2 | 418 | 499 | 1 | 82 | 5.53e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0959190 | AT5G23960.2 | 39.489 | 509 | 294 | 5 | 1 | 499 | 41 | 545 | 2.12e-136 | 405 |
Msa0959190 | AT5G23960.1 | 39.453 | 512 | 292 | 7 | 1 | 499 | 41 | 547 | 1.90e-135 | 402 |
Msa0959190 | AT1G70080.1 | 37.037 | 513 | 308 | 7 | 1 | 499 | 100 | 611 | 8.69e-121 | 367 |
Msa0959190 | AT3G14490.1 | 37.965 | 511 | 301 | 6 | 1 | 499 | 95 | 601 | 3.25e-119 | 363 |
Msa0959190 | AT3G14520.1 | 36.204 | 511 | 311 | 5 | 1 | 499 | 97 | 604 | 2.39e-117 | 358 |
Msa0959190 | AT1G31950.3 | 36.275 | 510 | 310 | 5 | 2 | 499 | 101 | 607 | 3.40e-116 | 355 |
Msa0959190 | AT1G31950.1 | 36.275 | 510 | 310 | 5 | 2 | 499 | 100 | 606 | 4.10e-116 | 355 |
Msa0959190 | AT3G14540.1 | 36.667 | 510 | 310 | 4 | 1 | 499 | 94 | 601 | 1.75e-115 | 353 |
Msa0959190 | AT3G29410.1 | 35.306 | 507 | 318 | 4 | 1 | 499 | 99 | 603 | 2.09e-110 | 340 |
Msa0959190 | AT3G29410.2 | 35.200 | 500 | 314 | 4 | 8 | 499 | 1 | 498 | 7.13e-110 | 335 |
Msa0959190 | AT5G44630.1 | 36.008 | 511 | 311 | 8 | 1 | 497 | 47 | 555 | 1.15e-109 | 337 |
Msa0959190 | AT4G20200.1 | 35.152 | 495 | 303 | 8 | 18 | 499 | 115 | 604 | 1.07e-108 | 336 |
Msa0959190 | AT3G32030.1 | 33.792 | 509 | 325 | 4 | 1 | 499 | 98 | 604 | 2.92e-108 | 335 |
Msa0959190 | AT4G20210.1 | 34.247 | 511 | 318 | 7 | 1 | 499 | 96 | 600 | 1.23e-107 | 333 |
Msa0959190 | AT4G13300.1 | 34.570 | 512 | 319 | 7 | 1 | 499 | 46 | 554 | 9.69e-107 | 329 |
Msa0959190 | AT1G33750.1 | 33.925 | 507 | 324 | 4 | 1 | 499 | 100 | 603 | 5.91e-106 | 328 |
Msa0959190 | AT4G13280.2 | 33.789 | 512 | 323 | 7 | 1 | 499 | 46 | 554 | 2.89e-101 | 315 |
Msa0959190 | AT3G29190.1 | 32.233 | 515 | 327 | 8 | 1 | 499 | 93 | 601 | 4.43e-101 | 316 |
Msa0959190 | AT4G15870.1 | 33.918 | 513 | 310 | 9 | 1 | 499 | 101 | 598 | 2.93e-100 | 313 |
Msa0959190 | AT4G20230.1 | 32.745 | 510 | 324 | 8 | 1 | 495 | 96 | 601 | 7.24e-98 | 308 |
Msa0959190 | AT4G20230.2 | 32.745 | 510 | 324 | 8 | 1 | 495 | 108 | 613 | 7.88e-98 | 308 |
Msa0959190 | AT3G14540.2 | 37.981 | 416 | 246 | 3 | 1 | 406 | 94 | 507 | 3.73e-97 | 303 |
Msa0959190 | AT1G31950.2 | 37.176 | 425 | 252 | 5 | 2 | 414 | 101 | 522 | 5.27e-97 | 303 |
Msa0959190 | AT3G29110.1 | 34.381 | 509 | 320 | 8 | 1 | 497 | 89 | 595 | 1.21e-95 | 301 |
Msa0959190 | AT2G23230.2 | 33.725 | 510 | 318 | 9 | 1 | 494 | 90 | 595 | 3.45e-94 | 298 |
Msa0959190 | AT1G66020.1 | 32.094 | 511 | 333 | 6 | 1 | 499 | 90 | 598 | 5.05e-93 | 295 |
Msa0959190 | AT4G16730.1 | 32.308 | 520 | 324 | 10 | 1 | 499 | 27 | 539 | 9.61e-93 | 292 |
Msa0959190 | AT2G23230.1 | 33.529 | 510 | 314 | 10 | 1 | 494 | 90 | 590 | 8.74e-92 | 292 |
Msa0959190 | AT1G48800.1 | 32.094 | 511 | 326 | 9 | 1 | 495 | 97 | 602 | 2.51e-90 | 288 |
Msa0959190 | AT4G16730.2 | 32.265 | 499 | 311 | 9 | 22 | 499 | 1 | 493 | 1.21e-89 | 283 |
Msa0959190 | AT4G13280.1 | 32.812 | 512 | 298 | 9 | 1 | 499 | 46 | 524 | 1.68e-89 | 283 |
Msa0959190 | AT5G48110.1 | 37.318 | 343 | 210 | 5 | 158 | 499 | 1 | 339 | 5.21e-85 | 266 |
Msa0959190 | AT1G61680.1 | 31.864 | 499 | 322 | 5 | 3 | 489 | 77 | 569 | 2.47e-84 | 271 |
Msa0959190 | AT4G16740.1 | 32.689 | 517 | 318 | 12 | 1 | 499 | 60 | 564 | 3.89e-84 | 271 |
Msa0959190 | AT2G24210.1 | 31.538 | 520 | 326 | 10 | 1 | 499 | 80 | 590 | 4.85e-82 | 266 |
Msa0959190 | AT1G61680.2 | 31.463 | 499 | 317 | 6 | 3 | 489 | 77 | 562 | 6.76e-81 | 262 |
Msa0959190 | AT3G25810.1 | 30.920 | 511 | 324 | 10 | 12 | 499 | 93 | 597 | 8.41e-79 | 258 |
Msa0959190 | AT1G48820.1 | 30.754 | 504 | 294 | 11 | 1 | 492 | 97 | 557 | 5.56e-78 | 254 |
Msa0959190 | AT3G25820.1 | 30.502 | 518 | 337 | 12 | 1 | 499 | 81 | 594 | 1.58e-76 | 252 |
Msa0959190 | AT3G25830.1 | 30.502 | 518 | 337 | 12 | 1 | 499 | 81 | 594 | 1.58e-76 | 252 |
Msa0959190 | AT4G16740.2 | 35.882 | 340 | 194 | 7 | 1 | 324 | 60 | 391 | 4.80e-64 | 213 |
Msa0959190 | AT1G66020.2 | 34.431 | 334 | 205 | 6 | 1 | 322 | 90 | 421 | 3.44e-62 | 209 |
Msa0959190 | AT3G25820.2 | 32.754 | 345 | 216 | 8 | 1 | 332 | 81 | 422 | 1.40e-57 | 197 |
Msa0959190 | AT4G16740.4 | 36.332 | 289 | 161 | 6 | 1 | 273 | 60 | 341 | 1.26e-53 | 185 |
Msa0959190 | AT4G16740.3 | 36.332 | 289 | 161 | 6 | 1 | 273 | 60 | 341 | 1.26e-53 | 185 |
Msa0959190 | AT3G25820.4 | 33.684 | 285 | 175 | 6 | 1 | 273 | 81 | 363 | 6.90e-50 | 176 |
Msa0959190 | AT3G25820.3 | 33.684 | 285 | 175 | 6 | 1 | 273 | 81 | 363 | 6.90e-50 | 176 |
Msa0959190 | AT1G79460.1 | 24.618 | 524 | 334 | 19 | 19 | 499 | 274 | 779 | 3.37e-31 | 128 |
Msa0959190 | AT1G61120.1 | 22.925 | 506 | 354 | 11 | 20 | 499 | 289 | 784 | 1.59e-24 | 108 |
Msa0959190 | AT4G02780.1 | 27.692 | 260 | 154 | 6 | 17 | 243 | 329 | 587 | 7.21e-20 | 93.6 |
Find 85 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6_3:-75608876 | Msa0959190:CDS |
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6_3:-75607871 | Msa0959190:CDS |
TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6_3:-75608875 | Msa0959190:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_3:+75607598 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6_3:+75607883 | None:intergenic |
AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6_3:-75607831 | Msa0959190:CDS |
ATTCTAAAATCATATGAAAA+AGG | 0.263470 | 6_3:-75609076 | None:intergenic |
TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6_3:-75608925 | Msa0959190:CDS |
AGACGAAATTAATCAAGTTT+TGG | 0.294333 | 6_3:-75608956 | Msa0959190:CDS |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6_3:+75607556 | None:intergenic |
TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_3:-75607193 | Msa0959190:CDS |
ATGCTGCTGCTATACATTGT+AGG | 0.337003 | 6_3:-75606121 | Msa0959190:CDS |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6_3:+75608159 | None:intergenic |
GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_3:-75607643 | Msa0959190:CDS |
CTGCTATACATTGTAGGCTT+AGG | 0.348781 | 6_3:-75606115 | Msa0959190:CDS |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6_3:-75605945 | Msa0959190:CDS |
GATTGATTCAATATGTCGTT+TGG | 0.383797 | 6_3:-75608998 | Msa0959190:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6_3:+75607884 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6_3:-75605931 | Msa0959190:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6_3:+75607905 | None:intergenic |
TAAAGCAACTTCGTGTAATC+CGG | 0.404734 | 6_3:+75607174 | None:intergenic |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_3:-75607160 | Msa0959190:CDS |
AATAAATACTCAAATTTCTA+CGG | 0.417455 | 6_3:+75605679 | None:intergenic |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6_3:+75606260 | None:intergenic |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6_3:-75605868 | Msa0959190:CDS |
TTCTGGTCACCTTGAGTCCA+TGG | 0.446304 | 6_3:-75608027 | Msa0959190:CDS |
ATTGATTCAATATGTCGTTT+GGG | 0.450241 | 6_3:-75608997 | Msa0959190:CDS |
GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6_3:-75607838 | Msa0959190:CDS |
TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_3:-75607205 | Msa0959190:CDS |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6_3:-75606201 | Msa0959190:CDS |
TGCTATACATTGTAGGCTTA+GGG | 0.457944 | 6_3:-75606114 | Msa0959190:CDS |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6_3:+75606286 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6_3:-75607880 | Msa0959190:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6_3:-75606200 | Msa0959190:CDS |
GATGACACATATGATGCATA+TGG | 0.467097 | 6_3:-75607539 | Msa0959190:CDS |
GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_3:-75607120 | Msa0959190:CDS |
ATAAATACTCAAATTTCTAC+GGG | 0.477038 | 6_3:+75605680 | None:intergenic |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6_3:+75608000 | None:intergenic |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6_3:-75605852 | Msa0959190:CDS |
ACAAATATTGGAAGAGGCGT+TGG | 0.490523 | 6_3:-75608057 | Msa0959190:intron |
TTGAGAACACACGTAAGAAT+AGG | 0.491590 | 6_3:+75605800 | None:intergenic |
ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_3:+75607613 | None:intergenic |
CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6_3:-75608867 | Msa0959190:CDS |
CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6_3:-75608841 | Msa0959190:intron |
AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6_3:+75608010 | None:intergenic |
AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6_3:-75608171 | Msa0959190:CDS |
TGAGGGAATATGATTTGAGT+AGG | 0.513307 | 6_3:-75605913 | Msa0959190:CDS |
CGACAAAAGACATCTTTGAC+TGG | 0.519009 | 6_3:-75606169 | Msa0959190:CDS |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6_3:+75607933 | None:intergenic |
GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6_3:-75608083 | Msa0959190:intron |
TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6_3:+75606212 | None:intergenic |
ATATAGGTGGTGGAAGGAGT+TGG | 0.524102 | 6_3:-75607699 | Msa0959190:intron |
GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_3:-75607202 | Msa0959190:CDS |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6_3:+75606306 | None:intergenic |
AACAATGGTCAGAGATGTTG+AGG | 0.533818 | 6_3:-75608126 | Msa0959190:CDS |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_3:+75607599 | None:intergenic |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6_3:-75605965 | Msa0959190:intron |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6_3:+75608001 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_3:-75607601 | Msa0959190:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6_3:-75606301 | Msa0959190:CDS |
TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6_3:-75608859 | Msa0959190:CDS |
TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6_3:+75607990 | None:intergenic |
GAGGGAATATGATTTGAGTA+GGG | 0.558934 | 6_3:-75605912 | Msa0959190:CDS |
ATCGGGTGGCCATGGACTCA+AGG | 0.566605 | 6_3:+75608018 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6_3:-75605930 | Msa0959190:CDS |
GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6_3:-75608090 | Msa0959190:CDS |
ATAGGTAACGGAACATCAGT+TGG | 0.569838 | 6_3:+75605818 | None:intergenic |
ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6_3:-75606225 | Msa0959190:CDS |
ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6_3:+75608881 | None:intergenic |
TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6_3:-75606206 | Msa0959190:CDS |
CTTTATATATAGGTGGTGGA+AGG | 0.588928 | 6_3:-75607705 | Msa0959190:intron |
ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_3:+75607659 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6_3:-75606239 | Msa0959190:CDS |
GATAACTACACACACTCTGA+CGG | 0.610210 | 6_3:-75605740 | Msa0959190:CDS |
AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6_3:+75606213 | None:intergenic |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6_3:-75608161 | Msa0959190:CDS |
AGGAAACTTCAGTGAAACAA+TGG | 0.623863 | 6_3:-75608141 | Msa0959190:CDS |
GACAAAAGACATCTTTGACT+GGG | 0.626667 | 6_3:-75606168 | Msa0959190:CDS |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6_3:-75606309 | Msa0959190:CDS |
ACCATGAACCATCATATGTG+AGG | 0.664721 | 6_3:+75608082 | None:intergenic |
ACAATGGTCAGAGATGTTGA+GGG | 0.666287 | 6_3:-75608125 | Msa0959190:CDS |
GGATGAAATTGTGTCAAGCG+AGG | 0.675331 | 6_3:-75606093 | Msa0959190:intron |
ACACACGTAAGAATAGGTAA+CGG | 0.686084 | 6_3:+75605806 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6_3:+75608004 | None:intergenic |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6_3:-75606270 | Msa0959190:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTACTAAAAAAAATTAC+AGG | + | chr6_3:75606140-75606159 | None:intergenic | 10.0% |
!! | TGATTATAAAGTAATATTAA+TGG | - | chr6_3:75606339-75606358 | Msa0959190:intron | 10.0% |
!!! | TATTTTTTGTCTTTATATAT+AGG | - | chr6_3:75607036-75607055 | Msa0959190:intron | 10.0% |
!!! | ATTTCATTTTAAATTTTGTA+TGG | - | chr6_3:75607790-75607809 | Msa0959190:intron | 10.0% |
!! | AATATAAAATAAACGTTAAT+AGG | + | chr6_3:75608396-75608415 | None:intergenic | 10.0% |
!! | TTGAGTAAAACAAATTATAT+TGG | - | chr6_3:75605999-75606018 | Msa0959190:intron | 15.0% |
!! | TAATATGAATGTCTAAAAAA+TGG | - | chr6_3:75606100-75606119 | Msa0959190:CDS | 15.0% |
!!! | ATACTTTTATATTTTGATGT+AGG | + | chr6_3:75606974-75606993 | None:intergenic | 15.0% |
!! | ATAAAGACAAAAAATAGTAT+AGG | + | chr6_3:75607032-75607051 | None:intergenic | 15.0% |
!!! | AAACATTTTTACATCATTTT+AGG | - | chr6_3:75607891-75607910 | Msa0959190:CDS | 15.0% |
!! | TATAAAAAACTTATTATCCA+TGG | - | chr6_3:75608030-75608049 | Msa0959190:CDS | 15.0% |
!! | TTGTAGAATTAATATTACAA+AGG | + | chr6_3:75608271-75608290 | None:intergenic | 15.0% |
!! | GAGAATAATTAAAAGAAATG+AGG | + | chr6_3:75606277-75606296 | None:intergenic | 20.0% |
!! | AATATTAATGGTATACATGT+AGG | - | chr6_3:75606351-75606370 | Msa0959190:intron | 20.0% |
!!! | ATTGTTGTTTAATATTATCG+TGG | - | chr6_3:75606539-75606558 | Msa0959190:intron | 20.0% |
!!! | TTTTTGTCTTTATATATAGG+TGG | - | chr6_3:75607039-75607058 | Msa0959190:intron | 20.0% |
!!! | ATTGTTTTATCTCTAAAGTT+TGG | + | chr6_3:75607327-75607346 | None:intergenic | 20.0% |
!!! | TTCTTTTAACAATAGAGTAA+TGG | - | chr6_3:75607498-75607517 | Msa0959190:CDS | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | - | chr6_3:75607527-75607546 | Msa0959190:CDS | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_3:75607531-75607550 | Msa0959190:CDS | 20.0% |
!!! | AAATTTTGTATGGTTATCAA+AGG | - | chr6_3:75607800-75607819 | Msa0959190:intron | 20.0% |
!!! | AATTTTGTATGGTTATCAAA+GGG | - | chr6_3:75607801-75607820 | Msa0959190:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAG+TGG | - | chr6_3:75608297-75608316 | Msa0959190:intron | 20.0% |
!! | TTAACAACATTTAGTTACAT+AGG | - | chr6_3:75608354-75608373 | Msa0959190:intron | 20.0% |
!!! | TTTAGTTACATAGGTTTTTT+TGG | - | chr6_3:75608363-75608382 | Msa0959190:intron | 20.0% |
!!! | TATAATAAGTTGACATAATG+AGG | - | chr6_3:75608710-75608729 | Msa0959190:intron | 20.0% |
!! | ATTGATTCAATATGTCGTTT+GGG | - | chr6_3:75605754-75605773 | Msa0959190:CDS | 25.0% |
!! | AGACGAAATTAATCAAGTTT+TGG | - | chr6_3:75605795-75605814 | Msa0959190:CDS | 25.0% |
! | TACAAGAGTTATGTTCAAAA+TGG | - | chr6_3:75605826-75605845 | Msa0959190:CDS | 25.0% |
!! | TAAGTTGAGATATATATACC+AGG | + | chr6_3:75605931-75605950 | None:intergenic | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | - | chr6_3:75606071-75606090 | Msa0959190:intron | 25.0% |
! | ATGTGAACATTACATAGATA+AGG | + | chr6_3:75606254-75606273 | None:intergenic | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | + | chr6_3:75606870-75606889 | None:intergenic | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | + | chr6_3:75606871-75606890 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | - | chr6_3:75606871-75606890 | Msa0959190:intron | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | + | chr6_3:75607198-75607217 | None:intergenic | 25.0% |
!! | TGAATTAGAACTTTTTACTC+AGG | - | chr6_3:75607244-75607263 | Msa0959190:intron | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | - | chr6_3:75607530-75607549 | Msa0959190:CDS | 25.0% |
!!! | CTCTTACTTCTTTTAAGAAT+GGG | + | chr6_3:75607675-75607694 | None:intergenic | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+TGG | + | chr6_3:75607676-75607695 | None:intergenic | 25.0% |
!! | TCATGAAGATACATTTTTCT+TGG | + | chr6_3:75607952-75607971 | None:intergenic | 25.0% |
!!! | TATCCATGGTTTTATTAACT+CGG | - | chr6_3:75608044-75608063 | Msa0959190:CDS | 25.0% |
! | TGCAAAAAACTTATTATCCA+TGG | - | chr6_3:75608185-75608204 | Msa0959190:intron | 25.0% |
!!! | ATCAAGTTGACTTTTTCCAT+GGG | + | chr6_3:75605736-75605755 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+TGG | + | chr6_3:75605737-75605756 | None:intergenic | 30.0% |
! | GATTGATTCAATATGTCGTT+TGG | - | chr6_3:75605753-75605772 | Msa0959190:CDS | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | - | chr6_3:75606070-75606089 | Msa0959190:intron | 30.0% |
AAAAAATTACAGGCTAACAG+TGG | + | chr6_3:75606130-75606149 | None:intergenic | 30.0% | |
!!! | ACGAAAGACACTCTTATTTT+AGG | + | chr6_3:75606206-75606225 | None:intergenic | 30.0% |
! | TTCCAAATTCCTTTTGATGT+AGG | + | chr6_3:75606925-75606944 | None:intergenic | 30.0% |
TTGTCTTTATATATAGGTGG+TGG | - | chr6_3:75607042-75607061 | Msa0959190:intron | 30.0% | |
!!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_3:75607109-75607128 | Msa0959190:CDS | 30.0% |
ATATTGGGGCTCAAAATATA+CGG | + | chr6_3:75607141-75607160 | None:intergenic | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | + | chr6_3:75607156-75607175 | None:intergenic | 30.0% | |
! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_3:75607157-75607176 | None:intergenic | 30.0% |
! | TTTTTACTCAGGCAATTGAA+AGG | - | chr6_3:75607255-75607274 | Msa0959190:intron | 30.0% |
AATTTACCCATCTTCAATCT+TGG | - | chr6_3:75607410-75607429 | Msa0959190:intron | 30.0% | |
! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_3:75607591-75607610 | Msa0959190:CDS | 30.0% |
!! | TTCTTTTAAGAATGGGTCAA+GGG | + | chr6_3:75607668-75607687 | None:intergenic | 30.0% |
! | AAAGTATCACCATAATGACT+TGG | - | chr6_3:75607926-75607945 | Msa0959190:CDS | 30.0% |
TAACTATATACCAACAACAG+AGG | - | chr6_3:75608481-75608500 | Msa0959190:intron | 30.0% | |
CACATATCAACAATATCAAG+TGG | - | chr6_3:75608512-75608531 | Msa0959190:intron | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | - | chr6_3:75608821-75608840 | Msa0959190:intron | 30.0% | |
! | TTTCTTTTGGCATTCTTGAA+TGG | + | chr6_3:75608871-75608890 | None:intergenic | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | + | chr6_3:75608884-75608903 | None:intergenic | 30.0% |
AAAAGAAAATTGACAACGCT+TGG | - | chr6_3:75608883-75608902 | Msa0959190:CDS | 30.0% | |
!! | ATTCTCTTGCTGTGCTATTT+AGG | - | chr6_3:75605875-75605894 | Msa0959190:CDS | 35.0% |
!! | TTCTCTTGCTGTGCTATTTA+GGG | - | chr6_3:75605876-75605895 | Msa0959190:CDS | 35.0% |
!! | AAGAGTGTCTTTCGTTTGAT+CGG | - | chr6_3:75606211-75606230 | Msa0959190:CDS | 35.0% |
AGATGTGTTCAACCAATTCA+AGG | - | chr6_3:75606580-75606599 | Msa0959190:intron | 35.0% | |
AGGAAACTTCAGTGAAACAA+TGG | - | chr6_3:75606610-75606629 | Msa0959190:intron | 35.0% | |
GGTTCATGGTGAACAAATAT+TGG | - | chr6_3:75606682-75606701 | Msa0959190:intron | 35.0% | |
TGGTGAACAAATATTGGAAG+AGG | - | chr6_3:75606688-75606707 | Msa0959190:intron | 35.0% | |
TTTACTTGTGTTGCAAGAGA+AGG | + | chr6_3:75606764-75606783 | None:intergenic | 35.0% | |
! | TCTACTTGCATTGGCAAAAT+TGG | - | chr6_3:75606880-75606899 | Msa0959190:intron | 35.0% |
! | ATTCCTTTTGATGTAGGCTT+TGG | + | chr6_3:75606919-75606938 | None:intergenic | 35.0% |
AGCCTACATCAAAAGGAATT+TGG | - | chr6_3:75606920-75606939 | Msa0959190:intron | 35.0% | |
!! | CTTTATATATAGGTGGTGGA+AGG | - | chr6_3:75607046-75607065 | Msa0959190:intron | 35.0% |
!!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_3:75607108-75607127 | Msa0959190:CDS | 35.0% |
TTCCTTGCTTGAGAATATTG+GGG | + | chr6_3:75607155-75607174 | None:intergenic | 35.0% | |
GATGACACATATGATGCATA+TGG | - | chr6_3:75607212-75607231 | Msa0959190:intron | 35.0% | |
! | CTAGTCATCAAGTTTAGAGT+TGG | - | chr6_3:75607365-75607384 | Msa0959190:intron | 35.0% |
TAGCAACCAAGATTGAAGAT+GGG | + | chr6_3:75607419-75607438 | None:intergenic | 35.0% | |
TTAGCAACCAAGATTGAAGA+TGG | + | chr6_3:75607420-75607439 | None:intergenic | 35.0% | |
TAGGTGGGATATTAATTGCT+TGG | - | chr6_3:75607546-75607565 | Msa0959190:CDS | 35.0% | |
TAAAGCAACTTCGTGTAATC+CGG | + | chr6_3:75607580-75607599 | None:intergenic | 35.0% | |
GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_3:75607631-75607650 | Msa0959190:CDS | 35.0% | |
!! | CTTCTTTTAAGAATGGGTCA+AGG | + | chr6_3:75607669-75607688 | None:intergenic | 35.0% |
TGGTTATCAAAGGGAAGTTT+AGG | - | chr6_3:75607810-75607829 | Msa0959190:intron | 35.0% | |
! | TTTTCTTGGCCAAGTCATTA+TGG | + | chr6_3:75607938-75607957 | None:intergenic | 35.0% |
GAACCGAGTTAATAAAACCA+TGG | + | chr6_3:75608050-75608069 | None:intergenic | 35.0% | |
GAACTGAGTTCATATAACCA+TGG | + | chr6_3:75608205-75608224 | None:intergenic | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | - | chr6_3:75608442-75608461 | Msa0959190:intron | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | - | chr6_3:75608550-75608569 | Msa0959190:intron | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | - | chr6_3:75608551-75608570 | Msa0959190:intron | 35.0% | |
GACAAAAGACATCTTTGACT+GGG | - | chr6_3:75608583-75608602 | Msa0959190:intron | 35.0% | |
! | GCAGCAGCATTAACAATTTT+TGG | + | chr6_3:75608620-75608639 | None:intergenic | 35.0% |
TGCTATACATTGTAGGCTTA+GGG | - | chr6_3:75608637-75608656 | Msa0959190:intron | 35.0% | |
AAACAGTTTGAGCAGAAAAG+AGG | - | chr6_3:75608786-75608805 | Msa0959190:intron | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | - | chr6_3:75608820-75608839 | Msa0959190:intron | 35.0% | |
TGAGGGAATATGATTTGAGT+AGG | - | chr6_3:75608838-75608857 | Msa0959190:intron | 35.0% | |
GAGGGAATATGATTTGAGTA+GGG | - | chr6_3:75608839-75608858 | Msa0959190:intron | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | - | chr6_3:75608899-75608918 | Msa0959190:CDS | 35.0% | |
ACACACGTAAGAATAGGTAA+CGG | + | chr6_3:75608948-75608967 | None:intergenic | 35.0% | |
TTGAGAACACACGTAAGAAT+AGG | + | chr6_3:75608954-75608973 | None:intergenic | 35.0% | |
CTCAAAAACAGAGAAACCCA+TGG | - | chr6_3:75605717-75605736 | Msa0959190:CDS | 40.0% | |
ATAGCACAGCAAGAGAATGA+AGG | + | chr6_3:75605873-75605892 | None:intergenic | 40.0% | |
!! | GTGTTTCTGAAGTGCGAAAA+AGG | + | chr6_3:75606394-75606413 | None:intergenic | 40.0% |
AACAATGGTCAGAGATGTTG+AGG | - | chr6_3:75606625-75606644 | Msa0959190:intron | 40.0% | |
ACAATGGTCAGAGATGTTGA+GGG | - | chr6_3:75606626-75606645 | Msa0959190:intron | 40.0% | |
GTATGAAGCCTCACATATGA+TGG | - | chr6_3:75606661-75606680 | Msa0959190:intron | 40.0% | |
ACCATGAACCATCATATGTG+AGG | + | chr6_3:75606672-75606691 | None:intergenic | 40.0% | |
! | ACAAATATTGGAAGAGGCGT+TGG | - | chr6_3:75606694-75606713 | Msa0959190:intron | 40.0% |
TTGCAAGAGAAGGACTCAAT+CGG | + | chr6_3:75606754-75606773 | None:intergenic | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | + | chr6_3:75606849-75606868 | None:intergenic | 40.0% | |
ACTACTCTATCTCGTGCATA+CGG | + | chr6_3:75607095-75607114 | None:intergenic | 40.0% | |
GTGGGATATTAATTGCTTGG+AGG | - | chr6_3:75607549-75607568 | Msa0959190:CDS | 40.0% | |
TAATTGCTTGGAGGATCTTC+CGG | - | chr6_3:75607558-75607577 | Msa0959190:CDS | 40.0% | |
ATAGTTAGCATTCAGCCATC+TGG | + | chr6_3:75608468-75608487 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | - | chr6_3:75608545-75608564 | Msa0959190:intron | 40.0% | |
CGACAAAAGACATCTTTGAC+TGG | - | chr6_3:75608582-75608601 | Msa0959190:intron | 40.0% | |
ATGCTGCTGCTATACATTGT+AGG | - | chr6_3:75608630-75608649 | Msa0959190:intron | 40.0% | |
CTGCTATACATTGTAGGCTT+AGG | - | chr6_3:75608636-75608655 | Msa0959190:intron | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | - | chr6_3:75608806-75608825 | Msa0959190:intron | 40.0% | |
!! | ATAGGTAACGGAACATCAGT+TGG | + | chr6_3:75608936-75608955 | None:intergenic | 40.0% |
!! | CAATCTCTCGCGTTTTATTG+AGG | - | chr6_3:75608971-75608990 | Msa0959190:CDS | 40.0% |
GATAACTACACACACTCTGA+CGG | - | chr6_3:75609011-75609030 | Msa0959190:CDS | 40.0% | |
!! | CTGTGCTATTTAGGGTGTTG+AGG | - | chr6_3:75605884-75605903 | Msa0959190:CDS | 45.0% |
!! | TTTAGGGTGTTGAGGCAACA+TGG | - | chr6_3:75605892-75605911 | Msa0959190:CDS | 45.0% |
CATGGACTTTACGTTTCACC+TGG | - | chr6_3:75605910-75605929 | Msa0959190:CDS | 45.0% | |
AACCAATTCAAGGACGAGCA+AGG | - | chr6_3:75606590-75606609 | Msa0959190:intron | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | + | chr6_3:75606595-75606614 | None:intergenic | 45.0% | |
GCCTCACATATGATGGTTCA+TGG | - | chr6_3:75606668-75606687 | Msa0959190:intron | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | + | chr6_3:75606753-75606772 | None:intergenic | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | - | chr6_3:75606808-75606827 | Msa0959190:intron | 45.0% | |
! | TAACTTCTTGCCACTAGCCT+AGG | + | chr6_3:75606821-75606840 | None:intergenic | 45.0% |
GCTCCAAAGCCTACATCAAA+AGG | - | chr6_3:75606913-75606932 | Msa0959190:intron | 45.0% | |
!! | ATATAGGTGGTGGAAGGAGT+TGG | - | chr6_3:75607052-75607071 | Msa0959190:intron | 45.0% |
AGCCCCAATATTCTCAAGCA+AGG | - | chr6_3:75607150-75607169 | Msa0959190:CDS | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | + | chr6_3:75608448-75608467 | None:intergenic | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | - | chr6_3:75608450-75608469 | Msa0959190:intron | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | + | chr6_3:75608494-75608513 | None:intergenic | 45.0% | |
ATCAAGTGGTTACCCAGTGT+TGG | - | chr6_3:75608526-75608545 | Msa0959190:intron | 45.0% | |
AAGAAGTCGTAGCCAACACT+GGG | + | chr6_3:75608541-75608560 | None:intergenic | 45.0% | |
TAAGAAGTCGTAGCCAACAC+TGG | + | chr6_3:75608542-75608561 | None:intergenic | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | - | chr6_3:75608658-75608677 | Msa0959190:intron | 45.0% | |
!!! | TTTTTTTTTTGTTTTTAATT+TGG | - | chr6_3:75605968-75605987 | Msa0959190:intron | 5.0% |
!!! | GAGGCGTTGGCTTTTACTTC+TGG | - | chr6_3:75606707-75606726 | Msa0959190:intron | 50.0% |
TTCTGGTCACCTTGAGTCCA+TGG | - | chr6_3:75606724-75606743 | Msa0959190:intron | 50.0% | |
AAGAGAAGGACTCAATCGGG+TGG | + | chr6_3:75606750-75606769 | None:intergenic | 50.0% | |
CTCTGCGCAAAAACTTGCCT+AGG | - | chr6_3:75606801-75606820 | Msa0959190:intron | 50.0% | |
ATCGGGTGGCCATGGACTCA+AGG | + | chr6_3:75606736-75606755 | None:intergenic | 60.0% | |
AGGACTCAATCGGGTGGCCA+TGG | + | chr6_3:75606744-75606763 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 75605688 | 75609085 | 75605688 | ID=Msa0959190;Name=Msa0959190 |
chr6_3 | mRNA | 75605688 | 75609085 | 75605688 | ID=Msa0959190-mRNA-1;Parent=Msa0959190;Name=Msa0959190-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0.83|0.71|7|0|499 |
chr6_3 | exon | 75608842 | 75609085 | 75608842 | ID=Msa0959190-mRNA-1:exon:13585;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75608084 | 75608191 | 75608084 | ID=Msa0959190-mRNA-1:exon:13584;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75607819 | 75608065 | 75607819 | ID=Msa0959190-mRNA-1:exon:13583;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75607497 | 75607715 | 75607497 | ID=Msa0959190-mRNA-1:exon:13582;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75607086 | 75607224 | 75607086 | ID=Msa0959190-mRNA-1:exon:13581;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75606094 | 75606342 | 75606094 | ID=Msa0959190-mRNA-1:exon:13580;Parent=Msa0959190-mRNA-1 |
chr6_3 | exon | 75605688 | 75605981 | 75605688 | ID=Msa0959190-mRNA-1:exon:13579;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75608842 | 75609085 | 75608842 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75608084 | 75608191 | 75608084 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75607819 | 75608065 | 75607819 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75607497 | 75607715 | 75607497 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75607086 | 75607224 | 75607086 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75606094 | 75606342 | 75606094 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
chr6_3 | CDS | 75605688 | 75605981 | 75605688 | ID=Msa0959190-mRNA-1:cds;Parent=Msa0959190-mRNA-1 |
Gene Sequence |
Protein sequence |