Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964460 | AEV52286.2 | 95.876 | 291 | 8 | 2 | 1 | 291 | 1 | 287 | 2.71e-176 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964460 | sp|P28641|DHN3_PEA | 65.556 | 90 | 19 | 5 | 207 | 286 | 145 | 232 | 5.34e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0898880 | Msa0964460 | 0.953176 | 4.879477e-111 | -8.615850e-47 |
| Msa0928010 | Msa0964460 | 0.832271 | 1.039883e-55 | -8.615850e-47 |
| Msa0964460 | Msa0998700 | 0.800907 | 1.156511e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964460 | MtrunA17_Chr6g0484671 | 63.551 | 321 | 73 | 11 | 1 | 288 | 1 | 310 | 5.40e-58 | 188 |
| Msa0964460 | MtrunA17_Chr6g0484671 | 61.940 | 134 | 31 | 5 | 117 | 237 | 186 | 312 | 1.51e-19 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964460 | AT1G20440.1 | 34.959 | 123 | 65 | 3 | 161 | 279 | 136 | 247 | 6.45e-13 | 67.8 |
Find 122 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCTGCTAGTACTTA+TGG | 0.188882 | 6_3:+91036035 | Msa0964460:CDS |
| GGCACTGAACAAAATACTTA+TGG | 0.240051 | 6_3:+91036155 | Msa0964460:CDS |
| ACTCATGAACAAAATACTTA+TGG | 0.240369 | 6_3:+91036296 | Msa0964460:CDS |
| AGGGGTTGTGGACAAGATTA+AGG | 0.278783 | 6_3:+91036259 | Msa0964460:CDS |
| AGGGATTATGGATAAGATTA+AGG | 0.301097 | 6_3:+91036436 | Msa0964460:CDS |
| ACTGGTAGGGTTGATGAATA+TGG | 0.317246 | 6_3:+91035449 | Msa0964460:CDS |
| AATACTTATGGGACAGGAAC+AGG | 0.323941 | 6_3:+91036308 | Msa0964460:CDS |
| AGTCATCCCACCACCACTAA+TGG | 0.343093 | 6_3:-91035513 | None:intergenic |
| ACAGGGACAGGGACAGGATA+TGG | 0.348344 | 6_3:+91036059 | Msa0964460:CDS |
| GCAGGTAGTGTAGGTGGTTA+TGG | 0.352202 | 6_3:+91035873 | Msa0964460:intron |
| AGCTCCATAGCCGGTTGTTC+CGG | 0.355691 | 6_3:-91035940 | Msa0964470:CDS |
| GGTACTGATGTTGGTGGAAC+CGG | 0.358594 | 6_3:+91035897 | Msa0964460:CDS |
| ACAGGAACAGGGACAGGAAC+TGG | 0.370527 | 6_3:+91036320 | Msa0964460:CDS |
| GGAGCTACAGGTGGCGGAAC+TGG | 0.372221 | 6_3:+91035957 | Msa0964460:CDS |
| TATGGGACAGGAACAGGAAC+TGG | 0.380823 | 6_3:+91036173 | Msa0964460:CDS |
| GTTGATCAAACCACAGGTCT+TGG | 0.384432 | 6_3:+91035575 | Msa0964460:CDS |
| AAGGAGAAGCTTCCCGGTAC+TGG | 0.386064 | 6_3:+91036455 | Msa0964460:CDS |
| AAGATTAAGGAGAAGCTTCC+CGG | 0.389032 | 6_3:+91036449 | Msa0964460:CDS |
| AGGGGTAGTGGACAAAATTA+AGG | 0.390999 | 6_3:+91035992 | Msa0964460:CDS |
| GGAAGCACTGGACAAGAGTA+TGG | 0.391237 | 6_3:+91036365 | Msa0964460:CDS |
| GCACTGAACAAAATACTTAT+GGG | 0.399234 | 6_3:+91036156 | Msa0964460:CDS |
| AATACTTATGGGACAGGAAC+AGG | 0.402461 | 6_3:+91036167 | Msa0964460:CDS |
| CTCATGAACAAAATACTTAT+GGG | 0.404417 | 6_3:+91036297 | Msa0964460:CDS |
| CAAGGCCAAGTTGATCAATA+TGG | 0.416063 | 6_3:+91035485 | Msa0964460:CDS |
| CATATTGATCAACTTGGCCT+TGG | 0.419277 | 6_3:-91035484 | None:intergenic |
| AAGATCAAGGAGAAGATTCC+TGG | 0.420374 | 6_3:+91036134 | Msa0964460:CDS |
| TATGGTACAGGGACAGGAAC+CGG | 0.420603 | 6_3:+91035921 | Msa0964460:CDS |
| AAAATGCTGCTAGTACTTAT+GGG | 0.425979 | 6_3:+91036036 | Msa0964460:CDS |
| GGTGGGATGACTGGTGCTAC+TGG | 0.426647 | 6_3:+91035524 | Msa0964460:CDS |
| AAAATTAAGGAGAAAATTCC+TGG | 0.431098 | 6_3:+91036005 | Msa0964460:CDS |
| ATCAACTTGGCCTTGGCTCA+AGG | 0.433377 | 6_3:-91035477 | None:intergenic |
| GGCAATCCCATTAGTGGTGG+TGG | 0.433710 | 6_3:+91035506 | Msa0964460:CDS |
| GGAACTGGGCATGGAACAAC+TGG | 0.444211 | 6_3:+91036188 | Msa0964460:CDS |
| GTCATCCCACCACCACTAAT+GGG | 0.445577 | 6_3:-91035512 | None:intergenic |
| GGTGGAACCGGGTATGGTAC+AGG | 0.446961 | 6_3:+91035909 | Msa0964460:CDS |
| CAACTCCATGATGGTGTTGA+TGG | 0.451134 | 6_3:-91035556 | None:intergenic |
| TCAACTTGGCCTTGGCTCAA+GGG | 0.457612 | 6_3:-91035476 | None:intergenic |
| CAACTTGGCCTTGGCTCAAG+GGG | 0.457999 | 6_3:-91035475 | None:intergenic |
| GGGACAGGAACCGGAACAAC+CGG | 0.462844 | 6_3:+91035930 | Msa0964460:CDS |
| AGTACTTATGGGACAGGGAC+AGG | 0.465164 | 6_3:+91036047 | Msa0964460:CDS |
| ATTAGTGGTGGTGGGATGAC+TGG | 0.468498 | 6_3:+91035515 | Msa0964460:CDS |
| CATCAACAACATGGAGAGAA+AGG | 0.468668 | 6_3:+91036239 | Msa0964460:CDS |
| AAGATTAAGGAGAAGATTCC+TGG | 0.468840 | 6_3:+91036272 | Msa0964460:CDS |
| GGTTATGGTGCTACTGGTGC+TGG | 0.471239 | 6_3:+91036209 | Msa0964460:CDS |
| GGTGCTACTGGTGCTGGTCA+TGG | 0.473833 | 6_3:+91036215 | Msa0964460:CDS |
| GGGACAGGATATGGAACAAC+TGG | 0.476535 | 6_3:+91036068 | Msa0964460:CDS |
| ACCGGGTATGGTACAGGGAC+AGG | 0.478921 | 6_3:+91035915 | Msa0964460:CDS |
| TTGATCAAACCACAGGTCTT+GGG | 0.482163 | 6_3:+91035576 | Msa0964460:CDS |
| CAACAAGGTGGTGATCAAAC+TGG | 0.483657 | 6_3:+91035431 | Msa0964460:CDS |
| CTTGGGAGCAACACAGGTAC+TGG | 0.487465 | 6_3:+91035593 | Msa0964460:CDS |
| TATGAAACACACACTGGTAG+TGG | 0.489576 | 6_3:+91035623 | Msa0964460:CDS |
| CCCGGTACTGGATCATGTAC+TGG | 0.491087 | 6_3:+91036467 | Msa0964460:CDS |
| TATGGGACAGGGACAGGGAC+AGG | 0.497421 | 6_3:+91036053 | Msa0964460:CDS |
| GGTTATGGAGGTACTGATGT+TGG | 0.501256 | 6_3:+91035888 | Msa0964460:CDS |
| ACAACTGGTTATGGTGCTAC+TGG | 0.504207 | 6_3:+91036203 | Msa0964460:CDS |
| ATGACTGGTGCTACTGGTCA+TGG | 0.507846 | 6_3:+91035530 | Msa0964460:CDS |
| GGAACCGGAACAACCGGCTA+TGG | 0.510275 | 6_3:+91035936 | Msa0964460:CDS |
| GAACAAAATACTTATGGGAC+AGG | 0.511585 | 6_3:+91036161 | Msa0964460:CDS |
| CATGGAACAACTACTGGCTA+TGG | 0.511666 | 6_3:+91036344 | Msa0964460:CDS |
| GGGCATGGAACAACTGGTTA+TGG | 0.513284 | 6_3:+91036194 | Msa0964460:CDS |
| AGGAGTTGTGGACAAGATCA+AGG | 0.513775 | 6_3:+91036121 | Msa0964460:CDS |
| GAACAAAATACTTATGGGAC+AGG | 0.514068 | 6_3:+91036302 | Msa0964460:CDS |
| GCTGCTAGTACTTATGGGAC+AGG | 0.515021 | 6_3:+91036041 | Msa0964460:CDS |
| CAATATGGCAATCCCATTAG+TGG | 0.515585 | 6_3:+91035500 | Msa0964460:CDS |
| TCCAGTACATGATCCAGTAC+CGG | 0.517361 | 6_3:-91036468 | Msa0964470:intron |
| ATCAACAACATGGAGAGAAA+GGG | 0.518167 | 6_3:+91036240 | Msa0964460:CDS |
| ACATGATAACAGAGGGGTAG+TGG | 0.519568 | 6_3:+91035980 | Msa0964460:CDS |
| ACTGGACATGGAACAACTAC+TGG | 0.521413 | 6_3:+91036338 | Msa0964460:CDS |
| ACATGGAGAGAAAGGGGTTG+TGG | 0.526465 | 6_3:+91036247 | Msa0964460:CDS |
| ATGAAACACACACTGGTAGT+GGG | 0.527706 | 6_3:+91035624 | Msa0964460:CDS |
| ACAGGAACAGGAACTGGGCA+TGG | 0.528775 | 6_3:+91036179 | Msa0964460:CDS |
| CAACAACATGGAGAAAATAG+AGG | 0.532385 | 6_3:+91036101 | Msa0964460:CDS |
| TATGGAAAAGAGGGTCATCA+TGG | 0.533254 | 6_3:+91036383 | Msa0964460:CDS |
| ACTACTGGCTATGGAAGCAC+TGG | 0.536598 | 6_3:+91036353 | Msa0964460:CDS |
| GATGTTGGTGGAACCGGGTA+TGG | 0.537940 | 6_3:+91035903 | Msa0964460:CDS |
| AGCAACACAGGTACTGGTAC+AGG | 0.538724 | 6_3:+91035599 | Msa0964460:CDS |
| GATTGCCATATTGATCAACT+TGG | 0.539982 | 6_3:-91035490 | None:intergenic |
| GCCACCTGTAGCTCCATAGC+CGG | 0.542385 | 6_3:-91035949 | Msa0964470:CDS |
| GGCTATGGAGCTACAGGTGG+CGG | 0.544468 | 6_3:+91035951 | Msa0964460:CDS |
| TGGACAAGAGTATGGAAAAG+AGG | 0.546793 | 6_3:+91036373 | Msa0964460:CDS |
| TGGAGAAAATAGAGGAGTTG+TGG | 0.548338 | 6_3:+91036109 | Msa0964460:CDS |
| TATGGGACAGGAACAGGGAC+AGG | 0.550364 | 6_3:+91036314 | Msa0964460:CDS |
| CCAGTACATGATCCAGTACC+GGG | 0.556880 | 6_3:-91036467 | Msa0964470:intron |
| ACAACCGGCTATGGAGCTAC+AGG | 0.564829 | 6_3:+91035945 | Msa0964460:CDS |
| ATATCTAATGCAGGTAGTGT+AGG | 0.567588 | 6_3:+91035864 | Msa0964460:intron |
| GAAACACACACTGGTAGTGG+GGG | 0.568884 | 6_3:+91035626 | Msa0964460:CDS |
| GGACACCATCAACACCATCA+TGG | 0.575811 | 6_3:+91035551 | Msa0964460:CDS |
| GTACTGATGTTGGTGGAACC+GGG | 0.575963 | 6_3:+91035898 | Msa0964460:CDS |
| TGAAACACACACTGGTAGTG+GGG | 0.580270 | 6_3:+91035625 | Msa0964460:CDS |
| ACAGGTCTTGGGAGCAACAC+AGG | 0.582966 | 6_3:+91035587 | Msa0964460:CDS |
| ACAGGGACAGGAACTGGACA+TGG | 0.585426 | 6_3:+91036326 | Msa0964460:CDS |
| GGATATGGAACAACTGGTGT+TGG | 0.588692 | 6_3:+91036074 | Msa0964460:CDS |
| TATGGAAACCCCTTGAGCCA+AGG | 0.599812 | 6_3:+91035467 | Msa0964460:CDS |
| AAGGTGGTGATCAAACTGGT+AGG | 0.600281 | 6_3:+91035435 | Msa0964460:CDS |
| GGACAAGAGTATGGAAAAGA+GGG | 0.606312 | 6_3:+91036374 | Msa0964460:CDS |
| GTGGAACCGGGTATGGTACA+GGG | 0.606916 | 6_3:+91035910 | Msa0964460:CDS |
| AAACACACACTGGTAGTGGG+GGG | 0.609197 | 6_3:+91035627 | Msa0964460:CDS |
| ACTGGATCATGTACTGGACA+TGG | 0.611300 | 6_3:+91036473 | Msa0964460:CDS |
| CATGGAGTTGATCAAACCAC+AGG | 0.616647 | 6_3:+91035569 | Msa0964460:CDS |
| TGTGTTGCTCCCAAGACCTG+TGG | 0.622846 | 6_3:-91035585 | None:intergenic |
| TCTAATGCAGGTAGTGTAGG+TGG | 0.624487 | 6_3:+91035867 | Msa0964460:intron |
| ATGGGACAGGAACAGGAACT+GGG | 0.626247 | 6_3:+91036174 | Msa0964460:CDS |
| GTACTTATGGGACAGGGACA+GGG | 0.627585 | 6_3:+91036048 | Msa0964460:CDS |
| GAACTGGACATGATAACAGA+GGG | 0.628252 | 6_3:+91035973 | Msa0964460:CDS |
| AACACACACTGGTAGTGGGG+GGG | 0.629088 | 6_3:+91035628 | Msa0964460:CDS |
| AGGTGGTGATCAAACTGGTA+GGG | 0.630608 | 6_3:+91035436 | Msa0964460:CDS |
| TGGTTTGATCAACTCCATGA+TGG | 0.631204 | 6_3:-91035565 | None:intergenic |
| TCAACAACATGGAGAGAAAG+GGG | 0.633909 | 6_3:+91036241 | Msa0964460:CDS |
| GCAATCCCATTAGTGGTGGT+GGG | 0.635724 | 6_3:+91035507 | Msa0964460:CDS |
| GGTAGTGTAGGTGGTTATGG+AGG | 0.651331 | 6_3:+91035876 | Msa0964460:intron |
| CTGCTAGTACTTATGGGACA+GGG | 0.654209 | 6_3:+91036042 | Msa0964460:CDS |
| ATACTTATGGGACAGGAACA+GGG | 0.655301 | 6_3:+91036309 | Msa0964460:CDS |
| GGTCATGGTCATCAACAACA+TGG | 0.657397 | 6_3:+91036230 | Msa0964460:CDS |
| TATGGAGGTACTGATGTTGG+TGG | 0.660350 | 6_3:+91035891 | Msa0964460:CDS |
| TATGGCAATCCCATTAGTGG+TGG | 0.666004 | 6_3:+91035503 | Msa0964460:CDS |
| GGACATGATGAGCAACACCT+TGG | 0.668375 | 6_3:+91036404 | Msa0964460:CDS |
| GGTGTTGGTCATCAACAACA+TGG | 0.679464 | 6_3:+91036089 | Msa0964460:CDS |
| GGAACTGGACATGATAACAG+AGG | 0.719077 | 6_3:+91035972 | Msa0964460:CDS |
| ACAATGTCTCAATATCAACA+AGG | 0.721195 | 6_3:+91035416 | None:intergenic |
| ACAGGATATGAAACACACAC+TGG | 0.723095 | 6_3:+91035617 | Msa0964460:CDS |
| ATGTCTCAATATCAACAAGG+TGG | 0.725256 | 6_3:+91035419 | Msa0964460:CDS |
| AACTGGACATGATAACAGAG+GGG | 0.772871 | 6_3:+91035974 | Msa0964460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAAAATTAAGTAACA+TGG | - | chr6_3:91035760-91035779 | None:intergenic | 15.0% |
| !! | TTTCAAATTCAAATGATTAT+CGG | + | chr6_3:91035775-91035794 | Msa0964460:intron | 15.0% |
| !! | TGAAAAAAAATTAAGTAACA+TGG | - | chr6_3:91035760-91035779 | None:intergenic | 15.0% |
| !! | TTTCAAATTCAAATGATTAT+CGG | + | chr6_3:91035775-91035794 | Msa0964460:intron | 15.0% |
| ! | CTAACATTTATATCTAATGC+AGG | + | chr6_3:91035855-91035874 | Msa0964460:intron | 25.0% |
| ! | AAAATTAAGGAGAAAATTCC+TGG | + | chr6_3:91036005-91036024 | Msa0964460:CDS | 25.0% |
| ! | ACTCATGAACAAAATACTTA+TGG | + | chr6_3:91036296-91036315 | Msa0964460:CDS | 25.0% |
| ! | CTCATGAACAAAATACTTAT+GGG | + | chr6_3:91036297-91036316 | Msa0964460:CDS | 25.0% |
| ! | CTAACATTTATATCTAATGC+AGG | + | chr6_3:91035855-91035874 | Msa0964460:intron | 25.0% |
| ! | AAAATTAAGGAGAAAATTCC+TGG | + | chr6_3:91036005-91036024 | Msa0964460:CDS | 25.0% |
| ! | ACTCATGAACAAAATACTTA+TGG | + | chr6_3:91036296-91036315 | Msa0964460:CDS | 25.0% |
| ! | CTCATGAACAAAATACTTAT+GGG | + | chr6_3:91036297-91036316 | Msa0964460:CDS | 25.0% |
| AAAATGCTGCTAGTACTTAT+GGG | + | chr6_3:91036036-91036055 | Msa0964460:CDS | 30.0% | |
| GCACTGAACAAAATACTTAT+GGG | + | chr6_3:91036156-91036175 | Msa0964460:CDS | 30.0% | |
| AGGGATTATGGATAAGATTA+AGG | + | chr6_3:91036436-91036455 | Msa0964460:CDS | 30.0% | |
| AAAATGCTGCTAGTACTTAT+GGG | + | chr6_3:91036036-91036055 | Msa0964460:CDS | 30.0% | |
| GCACTGAACAAAATACTTAT+GGG | + | chr6_3:91036156-91036175 | Msa0964460:CDS | 30.0% | |
| AGGGATTATGGATAAGATTA+AGG | + | chr6_3:91036436-91036455 | Msa0964460:CDS | 30.0% | |
| ATGTCTCAATATCAACAAGG+TGG | + | chr6_3:91035419-91035438 | Msa0964460:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | - | chr6_3:91035493-91035512 | None:intergenic | 35.0% | |
| ATATCTAATGCAGGTAGTGT+AGG | + | chr6_3:91035864-91035883 | Msa0964460:intron | 35.0% | |
| CAAAATGCTGCTAGTACTTA+TGG | + | chr6_3:91036035-91036054 | Msa0964460:CDS | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | + | chr6_3:91036101-91036120 | Msa0964460:CDS | 35.0% | |
| ! | TAAGTATTTTGTTCAGTGCC+AGG | - | chr6_3:91036155-91036174 | Msa0964470:intron | 35.0% |
| ! | GGCACTGAACAAAATACTTA+TGG | + | chr6_3:91036155-91036174 | Msa0964460:CDS | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | + | chr6_3:91036161-91036180 | Msa0964460:CDS | 35.0% | |
| ATCAACAACATGGAGAGAAA+GGG | + | chr6_3:91036240-91036259 | Msa0964460:CDS | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | + | chr6_3:91036272-91036291 | Msa0964460:CDS | 35.0% | |
| ! | GTATTTTGTTCATGAGTACC+AGG | - | chr6_3:91036293-91036312 | Msa0964470:intron | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | + | chr6_3:91036161-91036180 | Msa0964460:CDS | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | + | chr6_3:91036417-91036436 | Msa0964460:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | - | chr6_3:91036424-91036443 | Msa0964470:intron | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | + | chr6_3:91036424-91036443 | Msa0964460:CDS | 35.0% | |
| ATGTCTCAATATCAACAAGG+TGG | + | chr6_3:91035419-91035438 | Msa0964460:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | - | chr6_3:91035493-91035512 | None:intergenic | 35.0% | |
| ATATCTAATGCAGGTAGTGT+AGG | + | chr6_3:91035864-91035883 | Msa0964460:intron | 35.0% | |
| CAAAATGCTGCTAGTACTTA+TGG | + | chr6_3:91036035-91036054 | Msa0964460:CDS | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | + | chr6_3:91036101-91036120 | Msa0964460:CDS | 35.0% | |
| ! | TAAGTATTTTGTTCAGTGCC+AGG | - | chr6_3:91036155-91036174 | Msa0964470:intron | 35.0% |
| ! | GGCACTGAACAAAATACTTA+TGG | + | chr6_3:91036155-91036174 | Msa0964460:CDS | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | + | chr6_3:91036161-91036180 | Msa0964460:CDS | 35.0% | |
| ATCAACAACATGGAGAGAAA+GGG | + | chr6_3:91036240-91036259 | Msa0964460:CDS | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | + | chr6_3:91036272-91036291 | Msa0964460:CDS | 35.0% | |
| ! | GTATTTTGTTCATGAGTACC+AGG | - | chr6_3:91036293-91036312 | Msa0964470:intron | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | + | chr6_3:91036161-91036180 | Msa0964460:CDS | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | + | chr6_3:91036417-91036436 | Msa0964460:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | - | chr6_3:91036424-91036443 | Msa0964470:intron | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | + | chr6_3:91036424-91036443 | Msa0964460:CDS | 35.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | + | chr6_3:91035449-91035468 | Msa0964460:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | - | chr6_3:91035487-91035506 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | + | chr6_3:91035485-91035504 | Msa0964460:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | + | chr6_3:91035500-91035519 | Msa0964460:CDS | 40.0% | |
| TGGTTTGATCAACTCCATGA+TGG | - | chr6_3:91035568-91035587 | None:intergenic | 40.0% | |
| TTGATCAAACCACAGGTCTT+GGG | + | chr6_3:91035576-91035595 | Msa0964460:CDS | 40.0% | |
| ACAGGATATGAAACACACAC+TGG | + | chr6_3:91035617-91035636 | Msa0964460:CDS | 40.0% | |
| TATGAAACACACACTGGTAG+TGG | + | chr6_3:91035623-91035642 | Msa0964460:CDS | 40.0% | |
| ATGAAACACACACTGGTAGT+GGG | + | chr6_3:91035624-91035643 | Msa0964460:CDS | 40.0% | |
| GAACTGGACATGATAACAGA+GGG | + | chr6_3:91035973-91035992 | Msa0964460:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | + | chr6_3:91035974-91035993 | Msa0964460:CDS | 40.0% | |
| !! | AGGGGTAGTGGACAAAATTA+AGG | + | chr6_3:91035992-91036011 | Msa0964460:CDS | 40.0% |
| TGGAGAAAATAGAGGAGTTG+TGG | + | chr6_3:91036109-91036128 | Msa0964460:CDS | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | + | chr6_3:91036134-91036153 | Msa0964460:CDS | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | + | chr6_3:91036167-91036186 | Msa0964460:CDS | 40.0% | |
| CATCAACAACATGGAGAGAA+AGG | + | chr6_3:91036239-91036258 | Msa0964460:CDS | 40.0% | |
| TCAACAACATGGAGAGAAAG+GGG | + | chr6_3:91036241-91036260 | Msa0964460:CDS | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | + | chr6_3:91036167-91036186 | Msa0964460:CDS | 40.0% | |
| ATACTTATGGGACAGGAACA+GGG | + | chr6_3:91036168-91036187 | Msa0964460:CDS | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | + | chr6_3:91036373-91036392 | Msa0964460:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | + | chr6_3:91036374-91036393 | Msa0964460:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | + | chr6_3:91036383-91036402 | Msa0964460:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | + | chr6_3:91036416-91036435 | Msa0964460:CDS | 40.0% | |
| AAGATTAAGGAGAAGCTTCC+CGG | + | chr6_3:91036449-91036468 | Msa0964460:CDS | 40.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | + | chr6_3:91035449-91035468 | Msa0964460:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | - | chr6_3:91035487-91035506 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | + | chr6_3:91035485-91035504 | Msa0964460:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | + | chr6_3:91035500-91035519 | Msa0964460:CDS | 40.0% | |
| TGGTTTGATCAACTCCATGA+TGG | - | chr6_3:91035568-91035587 | None:intergenic | 40.0% | |
| TTGATCAAACCACAGGTCTT+GGG | + | chr6_3:91035576-91035595 | Msa0964460:CDS | 40.0% | |
| ACAGGATATGAAACACACAC+TGG | + | chr6_3:91035617-91035636 | Msa0964460:CDS | 40.0% | |
| TATGAAACACACACTGGTAG+TGG | + | chr6_3:91035623-91035642 | Msa0964460:CDS | 40.0% | |
| ATGAAACACACACTGGTAGT+GGG | + | chr6_3:91035624-91035643 | Msa0964460:CDS | 40.0% | |
| GAACTGGACATGATAACAGA+GGG | + | chr6_3:91035973-91035992 | Msa0964460:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | + | chr6_3:91035974-91035993 | Msa0964460:CDS | 40.0% | |
| !! | AGGGGTAGTGGACAAAATTA+AGG | + | chr6_3:91035992-91036011 | Msa0964460:CDS | 40.0% |
| TGGAGAAAATAGAGGAGTTG+TGG | + | chr6_3:91036109-91036128 | Msa0964460:CDS | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | + | chr6_3:91036134-91036153 | Msa0964460:CDS | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | + | chr6_3:91036167-91036186 | Msa0964460:CDS | 40.0% | |
| CATCAACAACATGGAGAGAA+AGG | + | chr6_3:91036239-91036258 | Msa0964460:CDS | 40.0% | |
| TCAACAACATGGAGAGAAAG+GGG | + | chr6_3:91036241-91036260 | Msa0964460:CDS | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | + | chr6_3:91036167-91036186 | Msa0964460:CDS | 40.0% | |
| ATACTTATGGGACAGGAACA+GGG | + | chr6_3:91036168-91036187 | Msa0964460:CDS | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | + | chr6_3:91036373-91036392 | Msa0964460:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | + | chr6_3:91036374-91036393 | Msa0964460:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | + | chr6_3:91036383-91036402 | Msa0964460:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | + | chr6_3:91036416-91036435 | Msa0964460:CDS | 40.0% | |
| AAGATTAAGGAGAAGCTTCC+CGG | + | chr6_3:91036449-91036468 | Msa0964460:CDS | 40.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | + | chr6_3:91035431-91035450 | Msa0964460:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | + | chr6_3:91035435-91035454 | Msa0964460:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | + | chr6_3:91035436-91035455 | Msa0964460:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | + | chr6_3:91035503-91035522 | Msa0964460:CDS | 45.0% | |
| ! | CAACTCCATGATGGTGTTGA+TGG | - | chr6_3:91035559-91035578 | None:intergenic | 45.0% |
| ! | CATGGAGTTGATCAAACCAC+AGG | + | chr6_3:91035569-91035588 | Msa0964460:CDS | 45.0% |
| GTTGATCAAACCACAGGTCT+TGG | + | chr6_3:91035575-91035594 | Msa0964460:CDS | 45.0% | |
| ! | TGAAACACACACTGGTAGTG+GGG | + | chr6_3:91035625-91035644 | Msa0964460:CDS | 45.0% |
| TCTAATGCAGGTAGTGTAGG+TGG | + | chr6_3:91035867-91035886 | Msa0964460:intron | 45.0% | |
| !! | GGTTATGGAGGTACTGATGT+TGG | + | chr6_3:91035888-91035907 | Msa0964460:CDS | 45.0% |
| !! | TATGGAGGTACTGATGTTGG+TGG | + | chr6_3:91035891-91035910 | Msa0964460:CDS | 45.0% |
| GGAACTGGACATGATAACAG+AGG | + | chr6_3:91035972-91035991 | Msa0964460:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | + | chr6_3:91035980-91035999 | Msa0964460:CDS | 45.0% | |
| !! | GCAGCATTTTGATCAGTACC+AGG | - | chr6_3:91036026-91036045 | Msa0964470:CDS | 45.0% |
| CTGCTAGTACTTATGGGACA+GGG | + | chr6_3:91036042-91036061 | Msa0964460:CDS | 45.0% | |
| GGATATGGAACAACTGGTGT+TGG | + | chr6_3:91036074-91036093 | Msa0964460:CDS | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_3:91036089-91036108 | Msa0964460:CDS | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | + | chr6_3:91036121-91036140 | Msa0964460:CDS | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | + | chr6_3:91036203-91036222 | Msa0964460:CDS | 45.0% |
| GGTCATGGTCATCAACAACA+TGG | + | chr6_3:91036230-91036249 | Msa0964460:CDS | 45.0% | |
| AGGGGTTGTGGACAAGATTA+AGG | + | chr6_3:91036259-91036278 | Msa0964460:CDS | 45.0% | |
| ACTGGACATGGAACAACTAC+TGG | + | chr6_3:91036338-91036357 | Msa0964460:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | + | chr6_3:91036344-91036363 | Msa0964460:CDS | 45.0% |
| TCCAGTACATGATCCAGTAC+CGG | - | chr6_3:91036471-91036490 | Msa0964470:intron | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | + | chr6_3:91036473-91036492 | Msa0964460:CDS | 45.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | + | chr6_3:91035431-91035450 | Msa0964460:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | + | chr6_3:91035435-91035454 | Msa0964460:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | + | chr6_3:91035436-91035455 | Msa0964460:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | + | chr6_3:91035503-91035522 | Msa0964460:CDS | 45.0% | |
| ! | CAACTCCATGATGGTGTTGA+TGG | - | chr6_3:91035559-91035578 | None:intergenic | 45.0% |
| ! | CATGGAGTTGATCAAACCAC+AGG | + | chr6_3:91035569-91035588 | Msa0964460:CDS | 45.0% |
| GTTGATCAAACCACAGGTCT+TGG | + | chr6_3:91035575-91035594 | Msa0964460:CDS | 45.0% | |
| ! | TGAAACACACACTGGTAGTG+GGG | + | chr6_3:91035625-91035644 | Msa0964460:CDS | 45.0% |
| TCTAATGCAGGTAGTGTAGG+TGG | + | chr6_3:91035867-91035886 | Msa0964460:intron | 45.0% | |
| !! | GGTTATGGAGGTACTGATGT+TGG | + | chr6_3:91035888-91035907 | Msa0964460:CDS | 45.0% |
| !! | TATGGAGGTACTGATGTTGG+TGG | + | chr6_3:91035891-91035910 | Msa0964460:CDS | 45.0% |
| GGAACTGGACATGATAACAG+AGG | + | chr6_3:91035972-91035991 | Msa0964460:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | + | chr6_3:91035980-91035999 | Msa0964460:CDS | 45.0% | |
| !! | GCAGCATTTTGATCAGTACC+AGG | - | chr6_3:91036026-91036045 | Msa0964470:CDS | 45.0% |
| CTGCTAGTACTTATGGGACA+GGG | + | chr6_3:91036042-91036061 | Msa0964460:CDS | 45.0% | |
| GGATATGGAACAACTGGTGT+TGG | + | chr6_3:91036074-91036093 | Msa0964460:CDS | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_3:91036089-91036108 | Msa0964460:CDS | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | + | chr6_3:91036121-91036140 | Msa0964460:CDS | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | + | chr6_3:91036203-91036222 | Msa0964460:CDS | 45.0% |
| GGTCATGGTCATCAACAACA+TGG | + | chr6_3:91036230-91036249 | Msa0964460:CDS | 45.0% | |
| AGGGGTTGTGGACAAGATTA+AGG | + | chr6_3:91036259-91036278 | Msa0964460:CDS | 45.0% | |
| ACTGGACATGGAACAACTAC+TGG | + | chr6_3:91036338-91036357 | Msa0964460:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | + | chr6_3:91036344-91036363 | Msa0964460:CDS | 45.0% |
| TCCAGTACATGATCCAGTAC+CGG | - | chr6_3:91036471-91036490 | Msa0964470:intron | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | + | chr6_3:91036473-91036492 | Msa0964460:CDS | 45.0% | |
| TATGGAAACCCCTTGAGCCA+AGG | + | chr6_3:91035467-91035486 | Msa0964460:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | - | chr6_3:91035479-91035498 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | - | chr6_3:91035480-91035499 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | + | chr6_3:91035507-91035526 | Msa0964460:CDS | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | - | chr6_3:91035515-91035534 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | - | chr6_3:91035516-91035535 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | + | chr6_3:91035515-91035534 | Msa0964460:CDS | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | + | chr6_3:91035530-91035549 | Msa0964460:CDS | 50.0% |
| GGACACCATCAACACCATCA+TGG | + | chr6_3:91035551-91035570 | Msa0964460:CDS | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | + | chr6_3:91035599-91035618 | Msa0964460:CDS | 50.0% |
| !! | GAAACACACACTGGTAGTGG+GGG | + | chr6_3:91035626-91035645 | Msa0964460:CDS | 50.0% |
| !! | AAACACACACTGGTAGTGGG+GGG | + | chr6_3:91035627-91035646 | Msa0964460:CDS | 50.0% |
| GCAGGTAGTGTAGGTGGTTA+TGG | + | chr6_3:91035873-91035892 | Msa0964460:intron | 50.0% | |
| GGTAGTGTAGGTGGTTATGG+AGG | + | chr6_3:91035876-91035895 | Msa0964460:intron | 50.0% | |
| !! | GGTACTGATGTTGGTGGAAC+CGG | + | chr6_3:91035897-91035916 | Msa0964460:CDS | 50.0% |
| ! | GTACTGATGTTGGTGGAACC+GGG | + | chr6_3:91035898-91035917 | Msa0964460:CDS | 50.0% |
| TATGGTACAGGGACAGGAAC+CGG | + | chr6_3:91035921-91035940 | Msa0964460:CDS | 50.0% | |
| GCTGCTAGTACTTATGGGAC+AGG | + | chr6_3:91036041-91036060 | Msa0964460:CDS | 50.0% | |
| AGTACTTATGGGACAGGGAC+AGG | + | chr6_3:91036047-91036066 | Msa0964460:CDS | 50.0% | |
| GTACTTATGGGACAGGGACA+GGG | + | chr6_3:91036048-91036067 | Msa0964460:CDS | 50.0% | |
| GGGACAGGATATGGAACAAC+TGG | + | chr6_3:91036068-91036087 | Msa0964460:CDS | 50.0% | |
| TATGGGACAGGAACAGGAAC+TGG | + | chr6_3:91036173-91036192 | Msa0964460:CDS | 50.0% | |
| ATGGGACAGGAACAGGAACT+GGG | + | chr6_3:91036174-91036193 | Msa0964460:CDS | 50.0% | |
| GGGCATGGAACAACTGGTTA+TGG | + | chr6_3:91036194-91036213 | Msa0964460:CDS | 50.0% | |
| ACATGGAGAGAAAGGGGTTG+TGG | + | chr6_3:91036247-91036266 | Msa0964460:CDS | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | + | chr6_3:91036353-91036372 | Msa0964460:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | + | chr6_3:91036365-91036384 | Msa0964460:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | + | chr6_3:91036404-91036423 | Msa0964460:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+GGG | - | chr6_3:91036470-91036489 | Msa0964470:intron | 50.0% | |
| TATGGAAACCCCTTGAGCCA+AGG | + | chr6_3:91035467-91035486 | Msa0964460:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | - | chr6_3:91035479-91035498 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | - | chr6_3:91035480-91035499 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | + | chr6_3:91035507-91035526 | Msa0964460:CDS | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | - | chr6_3:91035515-91035534 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | - | chr6_3:91035516-91035535 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | + | chr6_3:91035515-91035534 | Msa0964460:CDS | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | + | chr6_3:91035530-91035549 | Msa0964460:CDS | 50.0% |
| GGACACCATCAACACCATCA+TGG | + | chr6_3:91035551-91035570 | Msa0964460:CDS | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | + | chr6_3:91035599-91035618 | Msa0964460:CDS | 50.0% |
| !! | GAAACACACACTGGTAGTGG+GGG | + | chr6_3:91035626-91035645 | Msa0964460:CDS | 50.0% |
| !! | AAACACACACTGGTAGTGGG+GGG | + | chr6_3:91035627-91035646 | Msa0964460:CDS | 50.0% |
| GCAGGTAGTGTAGGTGGTTA+TGG | + | chr6_3:91035873-91035892 | Msa0964460:intron | 50.0% | |
| GGTAGTGTAGGTGGTTATGG+AGG | + | chr6_3:91035876-91035895 | Msa0964460:intron | 50.0% | |
| !! | GGTACTGATGTTGGTGGAAC+CGG | + | chr6_3:91035897-91035916 | Msa0964460:CDS | 50.0% |
| ! | GTACTGATGTTGGTGGAACC+GGG | + | chr6_3:91035898-91035917 | Msa0964460:CDS | 50.0% |
| TATGGTACAGGGACAGGAAC+CGG | + | chr6_3:91035921-91035940 | Msa0964460:CDS | 50.0% | |
| GCTGCTAGTACTTATGGGAC+AGG | + | chr6_3:91036041-91036060 | Msa0964460:CDS | 50.0% | |
| AGTACTTATGGGACAGGGAC+AGG | + | chr6_3:91036047-91036066 | Msa0964460:CDS | 50.0% | |
| GTACTTATGGGACAGGGACA+GGG | + | chr6_3:91036048-91036067 | Msa0964460:CDS | 50.0% | |
| GGGACAGGATATGGAACAAC+TGG | + | chr6_3:91036068-91036087 | Msa0964460:CDS | 50.0% | |
| TATGGGACAGGAACAGGAAC+TGG | + | chr6_3:91036173-91036192 | Msa0964460:CDS | 50.0% | |
| ATGGGACAGGAACAGGAACT+GGG | + | chr6_3:91036174-91036193 | Msa0964460:CDS | 50.0% | |
| GGGCATGGAACAACTGGTTA+TGG | + | chr6_3:91036194-91036213 | Msa0964460:CDS | 50.0% | |
| ACATGGAGAGAAAGGGGTTG+TGG | + | chr6_3:91036247-91036266 | Msa0964460:CDS | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | + | chr6_3:91036353-91036372 | Msa0964460:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | + | chr6_3:91036365-91036384 | Msa0964460:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | + | chr6_3:91036404-91036423 | Msa0964460:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+GGG | - | chr6_3:91036470-91036489 | Msa0964470:intron | 50.0% | |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | - | chr6_3:91035478-91035497 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | + | chr6_3:91035506-91035525 | Msa0964460:CDS | 55.0% | |
| ! | TGTGTTGCTCCCAAGACCTG+TGG | - | chr6_3:91035588-91035607 | None:intergenic | 55.0% |
| ACAGGTCTTGGGAGCAACAC+AGG | + | chr6_3:91035587-91035606 | Msa0964460:CDS | 55.0% | |
| CTTGGGAGCAACACAGGTAC+TGG | + | chr6_3:91035593-91035612 | Msa0964460:CDS | 55.0% | |
| !! | AACACACACTGGTAGTGGGG+GGG | + | chr6_3:91035628-91035647 | Msa0964460:CDS | 55.0% |
| ! | GATGTTGGTGGAACCGGGTA+TGG | + | chr6_3:91035903-91035922 | Msa0964460:CDS | 55.0% |
| GTGGAACCGGGTATGGTACA+GGG | + | chr6_3:91035910-91035929 | Msa0964460:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | - | chr6_3:91035919-91035938 | Msa0964470:CDS | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | - | chr6_3:91035943-91035962 | Msa0964470:CDS | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | + | chr6_3:91035945-91035964 | Msa0964460:CDS | 55.0% | |
| ACAGGGACAGGGACAGGATA+TGG | + | chr6_3:91036059-91036078 | Msa0964460:CDS | 55.0% | |
| ACAGGAACAGGAACTGGGCA+TGG | + | chr6_3:91036179-91036198 | Msa0964460:CDS | 55.0% | |
| GGAACTGGGCATGGAACAAC+TGG | + | chr6_3:91036188-91036207 | Msa0964460:CDS | 55.0% | |
| !! | GGTTATGGTGCTACTGGTGC+TGG | + | chr6_3:91036209-91036228 | Msa0964460:CDS | 55.0% |
| TATGGGACAGGAACAGGGAC+AGG | + | chr6_3:91036314-91036333 | Msa0964460:CDS | 55.0% | |
| ACAGGAACAGGGACAGGAAC+TGG | + | chr6_3:91036320-91036339 | Msa0964460:CDS | 55.0% | |
| ACAGGGACAGGAACTGGACA+TGG | + | chr6_3:91036326-91036345 | Msa0964460:CDS | 55.0% | |
| AAGGAGAAGCTTCCCGGTAC+TGG | + | chr6_3:91036455-91036474 | Msa0964460:CDS | 55.0% | |
| ! | CCCGGTACTGGATCATGTAC+TGG | + | chr6_3:91036467-91036486 | Msa0964460:CDS | 55.0% |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | - | chr6_3:91035478-91035497 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | + | chr6_3:91035506-91035525 | Msa0964460:CDS | 55.0% | |
| ! | TGTGTTGCTCCCAAGACCTG+TGG | - | chr6_3:91035588-91035607 | None:intergenic | 55.0% |
| ACAGGTCTTGGGAGCAACAC+AGG | + | chr6_3:91035587-91035606 | Msa0964460:CDS | 55.0% | |
| CTTGGGAGCAACACAGGTAC+TGG | + | chr6_3:91035593-91035612 | Msa0964460:CDS | 55.0% | |
| !! | AACACACACTGGTAGTGGGG+GGG | + | chr6_3:91035628-91035647 | Msa0964460:CDS | 55.0% |
| ! | GATGTTGGTGGAACCGGGTA+TGG | + | chr6_3:91035903-91035922 | Msa0964460:CDS | 55.0% |
| GTGGAACCGGGTATGGTACA+GGG | + | chr6_3:91035910-91035929 | Msa0964460:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | - | chr6_3:91035919-91035938 | Msa0964470:CDS | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | - | chr6_3:91035943-91035962 | Msa0964470:CDS | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | + | chr6_3:91035945-91035964 | Msa0964460:CDS | 55.0% | |
| ACAGGGACAGGGACAGGATA+TGG | + | chr6_3:91036059-91036078 | Msa0964460:CDS | 55.0% | |
| ACAGGAACAGGAACTGGGCA+TGG | + | chr6_3:91036179-91036198 | Msa0964460:CDS | 55.0% | |
| GGAACTGGGCATGGAACAAC+TGG | + | chr6_3:91036188-91036207 | Msa0964460:CDS | 55.0% | |
| !! | GGTTATGGTGCTACTGGTGC+TGG | + | chr6_3:91036209-91036228 | Msa0964460:CDS | 55.0% |
| TATGGGACAGGAACAGGGAC+AGG | + | chr6_3:91036314-91036333 | Msa0964460:CDS | 55.0% | |
| ACAGGAACAGGGACAGGAAC+TGG | + | chr6_3:91036320-91036339 | Msa0964460:CDS | 55.0% | |
| ACAGGGACAGGAACTGGACA+TGG | + | chr6_3:91036326-91036345 | Msa0964460:CDS | 55.0% | |
| AAGGAGAAGCTTCCCGGTAC+TGG | + | chr6_3:91036455-91036474 | Msa0964460:CDS | 55.0% | |
| ! | CCCGGTACTGGATCATGTAC+TGG | + | chr6_3:91036467-91036486 | Msa0964460:CDS | 55.0% |
| !! | GGTGGGATGACTGGTGCTAC+TGG | + | chr6_3:91035524-91035543 | Msa0964460:CDS | 60.0% |
| GGTGGAACCGGGTATGGTAC+AGG | + | chr6_3:91035909-91035928 | Msa0964460:CDS | 60.0% | |
| ACCGGGTATGGTACAGGGAC+AGG | + | chr6_3:91035915-91035934 | Msa0964460:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | + | chr6_3:91035930-91035949 | Msa0964460:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | + | chr6_3:91035936-91035955 | Msa0964460:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | + | chr6_3:91035948-91035967 | Msa0964460:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | - | chr6_3:91035952-91035971 | Msa0964470:CDS | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | + | chr6_3:91035951-91035970 | Msa0964460:CDS | 60.0% | |
| TATGGGACAGGGACAGGGAC+AGG | + | chr6_3:91036053-91036072 | Msa0964460:CDS | 60.0% | |
| !! | GGTGCTACTGGTGCTGGTCA+TGG | + | chr6_3:91036215-91036234 | Msa0964460:CDS | 60.0% |
| !! | GGTGGGATGACTGGTGCTAC+TGG | + | chr6_3:91035524-91035543 | Msa0964460:CDS | 60.0% |
| GGTGGAACCGGGTATGGTAC+AGG | + | chr6_3:91035909-91035928 | Msa0964460:CDS | 60.0% | |
| ACCGGGTATGGTACAGGGAC+AGG | + | chr6_3:91035915-91035934 | Msa0964460:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | + | chr6_3:91035930-91035949 | Msa0964460:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | + | chr6_3:91035936-91035955 | Msa0964460:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | + | chr6_3:91035948-91035967 | Msa0964460:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | - | chr6_3:91035952-91035971 | Msa0964470:CDS | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | + | chr6_3:91035951-91035970 | Msa0964460:CDS | 60.0% | |
| TATGGGACAGGGACAGGGAC+AGG | + | chr6_3:91036053-91036072 | Msa0964460:CDS | 60.0% | |
| !! | GGTGCTACTGGTGCTGGTCA+TGG | + | chr6_3:91036215-91036234 | Msa0964460:CDS | 60.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | + | chr6_3:91035957-91035976 | Msa0964460:CDS | 65.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | + | chr6_3:91035957-91035976 | Msa0964460:CDS | 65.0% |
| !! | GGTAGTGGGGGGGCTCACAC+AGG | + | chr6_3:91035638-91035657 | Msa0964460:CDS | 70.0% |
| !! | GGTAGTGGGGGGGCTCACAC+AGG | + | chr6_3:91035638-91035657 | Msa0964460:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 91035419 | 91036511 | 91035419 | ID=Msa0964460;Name=Msa0964460 |
| chr6_3 | mRNA | 91035419 | 91036511 | 91035419 | ID=Msa0964460-mRNA-1;Parent=Msa0964460;Name=Msa0964460-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|291 |
| chr6_3 | exon | 91035419 | 91035659 | 91035419 | ID=Msa0964460-mRNA-1:exon:16415;Parent=Msa0964460-mRNA-1 |
| chr6_3 | exon | 91035877 | 91036511 | 91035877 | ID=Msa0964460-mRNA-1:exon:16416;Parent=Msa0964460-mRNA-1 |
| chr6_3 | CDS | 91035419 | 91035659 | 91035419 | ID=Msa0964460-mRNA-1:cds;Parent=Msa0964460-mRNA-1 |
| chr6_3 | CDS | 91035877 | 91036511 | 91035877 | ID=Msa0964460-mRNA-1:cds;Parent=Msa0964460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
