Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898880 | AEV52286.2 | 92.734 | 289 | 2 | 2 | 1 | 272 | 1 | 287 | 4.04e-168 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898880 | sp|P28639|DHN1_PEA | 46.667 | 195 | 61 | 6 | 1 | 156 | 1 | 191 | 5.75e-21 | 90.9 |
| Msa0898880 | sp|P28639|DHN1_PEA | 57.317 | 82 | 29 | 2 | 188 | 267 | 120 | 197 | 2.44e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898880 | G9FYZ2 | 92.734 | 289 | 2 | 2 | 1 | 272 | 1 | 287 | 1.93e-168 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0898880 | Msa0920480 | 0.800713 | 1.266550e-48 | -8.615850e-47 |
| Msa0898880 | Msa0928010 | 0.871828 | 5.073169e-67 | -8.615850e-47 |
| Msa0898880 | Msa0928030 | 0.815618 | 8.431288e-52 | -8.615850e-47 |
| Msa0898880 | Msa0964460 | 0.953176 | 4.879477e-111 | -8.615850e-47 |
| Msa0898880 | Msa0998700 | 0.846486 | 2.107008e-59 | -8.615850e-47 |
| Msa0898880 | Msa1338610 | 0.816114 | 6.535626e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898880 | MtrunA17_Chr6g0484671 | 74.138 | 174 | 35 | 5 | 99 | 269 | 144 | 310 | 4.62e-43 | 149 |
| Msa0898880 | MtrunA17_Chr6g0484671 | 65.672 | 134 | 24 | 5 | 100 | 218 | 186 | 312 | 2.14e-19 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898880 | AT1G20440.1 | 34.959 | 123 | 65 | 3 | 142 | 260 | 136 | 247 | 6.73e-13 | 67.4 |
Find 109 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCTGCTAGTACTTA+TGG | 0.188882 | 6_1:-93524677 | Msa0898880:CDS |
| GGCACTGAACAAAATACTTA+TGG | 0.240051 | 6_1:-93524563 | Msa0898880:CDS |
| ACTCATGAACAAAATACTTA+TGG | 0.240369 | 6_1:-93524422 | Msa0898880:CDS |
| AGGGGTTGTGGACAAGATTA+AGG | 0.278783 | 6_1:-93524459 | Msa0898880:CDS |
| ACTGGTAGGGTTGATGAATA+TGG | 0.317246 | 6_1:-93525263 | Msa0898880:CDS |
| AATACTTATGGGACAGGAAC+AGG | 0.323941 | 6_1:-93524410 | Msa0898880:CDS |
| GCAGGTGGTGTAGGTGGTTA+TGG | 0.340603 | 6_1:-93524839 | Msa0898880:intron |
| AGTCATCCCACCACCACTAA+TGG | 0.343093 | 6_1:+93525199 | None:intergenic |
| AGCTCCATAGCCGGTTGTTC+CGG | 0.355691 | 6_1:+93524772 | None:intergenic |
| GGTACTGATGTTGGTGGAAC+CGG | 0.358594 | 6_1:-93524815 | Msa0898880:CDS |
| ACAGGAACAGGGACAGGAAC+TGG | 0.370527 | 6_1:-93524398 | Msa0898880:CDS |
| GGAGCTACAGGTGGCGGAAC+TGG | 0.372221 | 6_1:-93524755 | Msa0898880:CDS |
| TATGGGACAGGGACAGGATA+TGG | 0.372965 | 6_1:-93524659 | Msa0898880:CDS |
| TATGGGACAGGAACAGGAAC+TGG | 0.380823 | 6_1:-93524545 | Msa0898880:CDS |
| GTTGATCAAACCACAGGTCT+TGG | 0.384432 | 6_1:-93525137 | Msa0898880:CDS |
| AGGGGTAGTGGACAAAATTA+AGG | 0.390999 | 6_1:-93524720 | Msa0898880:CDS |
| GGAAGCACTGGACAAGAGTA+TGG | 0.391237 | 6_1:-93524353 | Msa0898880:CDS |
| GCACTGAACAAAATACTTAT+GGG | 0.399234 | 6_1:-93524562 | Msa0898880:CDS |
| AATACTTATGGGACAGGAAC+AGG | 0.402461 | 6_1:-93524551 | Msa0898880:CDS |
| CTCATGAACAAAATACTTAT+GGG | 0.404417 | 6_1:-93524421 | Msa0898880:CDS |
| CAAGGCCAAGTTGATCAATA+TGG | 0.416063 | 6_1:-93525227 | Msa0898880:CDS |
| CATATTGATCAACTTGGCCT+TGG | 0.419277 | 6_1:+93525228 | None:intergenic |
| AAGATCAAGGAGAAGATTCC+TGG | 0.420374 | 6_1:-93524584 | Msa0898880:CDS |
| TATGGTACAGGGACAGGAAC+CGG | 0.420603 | 6_1:-93524791 | Msa0898880:CDS |
| AAAATTAAGGAGAAGATTCC+TGG | 0.424067 | 6_1:-93524269 | Msa0898880:CDS |
| AAAATGCTGCTAGTACTTAT+GGG | 0.425979 | 6_1:-93524676 | Msa0898880:CDS |
| GGTGGGATGACTGGTGCTAC+TGG | 0.426647 | 6_1:-93525188 | Msa0898880:CDS |
| AAAATTAAGGAGAAAATTCC+TGG | 0.431098 | 6_1:-93524707 | Msa0898880:CDS |
| ATCAACTTGGCCTTGGCTCA+AGG | 0.433377 | 6_1:+93525235 | None:intergenic |
| GGCAATCCCATTAGTGGTGG+TGG | 0.433710 | 6_1:-93525206 | Msa0898880:CDS |
| GGAACTGGGCATGGAACAAC+TGG | 0.444211 | 6_1:-93524530 | Msa0898880:CDS |
| GTCATCCCACCACCACTAAT+GGG | 0.445577 | 6_1:+93525200 | None:intergenic |
| GGTGGAACCGGGTATGGTAC+AGG | 0.446961 | 6_1:-93524803 | Msa0898880:CDS |
| CAACTCCATGATGGTGTTGA+TGG | 0.451134 | 6_1:+93525156 | None:intergenic |
| TCAACTTGGCCTTGGCTCAA+GGG | 0.457612 | 6_1:+93525236 | None:intergenic |
| CAACTTGGCCTTGGCTCAAG+GGG | 0.457999 | 6_1:+93525237 | None:intergenic |
| GGGACAGGAACCGGAACAAC+CGG | 0.462844 | 6_1:-93524782 | Msa0898880:CDS |
| ATTAGTGGTGGTGGGATGAC+TGG | 0.468498 | 6_1:-93525197 | Msa0898880:CDS |
| CATCAACAACATGGAGAGAA+AGG | 0.468668 | 6_1:-93524479 | Msa0898880:CDS |
| AAGATTAAGGAGAAGATTCC+TGG | 0.468840 | 6_1:-93524446 | Msa0898880:CDS |
| AAGGAGAAGATTCCTGGTAC+TGG | 0.469022 | 6_1:-93524263 | Msa0898880:CDS |
| GGTTATGGTGCTACTGGTGC+TGG | 0.471239 | 6_1:-93524509 | Msa0898880:CDS |
| GGTGCTACTGGTGCTGGTCA+TGG | 0.473833 | 6_1:-93524503 | Msa0898880:CDS |
| GGGACAGGATATGGAACAAC+TGG | 0.476535 | 6_1:-93524650 | Msa0898880:CDS |
| ACCGGGTATGGTACAGGGAC+AGG | 0.478921 | 6_1:-93524797 | Msa0898880:CDS |
| TTGATCAAACCACAGGTCTT+GGG | 0.482163 | 6_1:-93525136 | Msa0898880:CDS |
| CAACAAGGTGGTGATCAAAC+TGG | 0.483657 | 6_1:-93525281 | Msa0898880:CDS |
| GGTTATGGAGGTACTGATGT+TGG | 0.501256 | 6_1:-93524824 | Msa0898880:CDS |
| ACAACTGGTTATGGTGCTAC+TGG | 0.504207 | 6_1:-93524515 | Msa0898880:CDS |
| CCAGTACATGATCCAGTACC+AGG | 0.505527 | 6_1:+93524251 | None:intergenic |
| ATGACTGGTGCTACTGGTCA+TGG | 0.507846 | 6_1:-93525182 | Msa0898880:CDS |
| AGTACTTATGGGACAGGGAC+AGG | 0.509114 | 6_1:-93524665 | Msa0898880:CDS |
| GGAACCGGAACAACCGGCTA+TGG | 0.510275 | 6_1:-93524776 | Msa0898880:CDS |
| GAACAAAATACTTATGGGAC+AGG | 0.511585 | 6_1:-93524557 | Msa0898880:CDS |
| CATGGAACAACTACTGGCTA+TGG | 0.511666 | 6_1:-93524374 | Msa0898880:CDS |
| GGGCATGGAACAACTGGTTA+TGG | 0.513284 | 6_1:-93524524 | Msa0898880:CDS |
| AGGAGTTGTGGACAAGATCA+AGG | 0.513775 | 6_1:-93524597 | Msa0898880:CDS |
| GAACAAAATACTTATGGGAC+AGG | 0.514068 | 6_1:-93524416 | Msa0898880:CDS |
| GCTGCTAGTACTTATGGGAC+AGG | 0.515021 | 6_1:-93524671 | Msa0898880:CDS |
| CAATATGGCAATCCCATTAG+TGG | 0.515585 | 6_1:-93525212 | Msa0898880:CDS |
| ATATCTAATGCAGGTGGTGT+AGG | 0.516341 | 6_1:-93524848 | Msa0898880:intron |
| CCTGGTACTGGATCATGTAC+TGG | 0.516603 | 6_1:-93524251 | Msa0898880:CDS |
| ATCAACAACATGGAGAGAAA+GGG | 0.518167 | 6_1:-93524478 | Msa0898880:CDS |
| ACATGATAACAGAGGGGTAG+TGG | 0.519568 | 6_1:-93524732 | Msa0898880:CDS |
| ACTGGACATGGAACAACTAC+TGG | 0.521413 | 6_1:-93524380 | Msa0898880:CDS |
| ACATGGAGAGAAAGGGGTTG+TGG | 0.526465 | 6_1:-93524471 | Msa0898880:CDS |
| ACAGGAACAGGAACTGGGCA+TGG | 0.528775 | 6_1:-93524539 | Msa0898880:CDS |
| CAACAACATGGAGAAAATAG+AGG | 0.532385 | 6_1:-93524617 | Msa0898880:CDS |
| TATGGAAAAGAGGGTCATCA+TGG | 0.533254 | 6_1:-93524335 | Msa0898880:CDS |
| ACTACTGGCTATGGAAGCAC+TGG | 0.536598 | 6_1:-93524365 | Msa0898880:CDS |
| GATGTTGGTGGAACCGGGTA+TGG | 0.537940 | 6_1:-93524809 | Msa0898880:CDS |
| GATTGCCATATTGATCAACT+TGG | 0.539982 | 6_1:+93525222 | None:intergenic |
| GCCACCTGTAGCTCCATAGC+CGG | 0.542385 | 6_1:+93524763 | None:intergenic |
| GGCTATGGAGCTACAGGTGG+CGG | 0.544468 | 6_1:-93524761 | Msa0898880:CDS |
| TGGACAAGAGTATGGAAAAG+AGG | 0.546793 | 6_1:-93524345 | Msa0898880:CDS |
| TGGAGAAAATAGAGGAGTTG+TGG | 0.548338 | 6_1:-93524609 | Msa0898880:CDS |
| TATGGGACAGGAACAGGGAC+AGG | 0.550364 | 6_1:-93524404 | Msa0898880:CDS |
| ACAACCGGCTATGGAGCTAC+AGG | 0.564829 | 6_1:-93524767 | Msa0898880:CDS |
| GGACACCATCAACACCATCA+TGG | 0.575811 | 6_1:-93525161 | Msa0898880:CDS |
| GTACTGATGTTGGTGGAACC+GGG | 0.575963 | 6_1:-93524814 | Msa0898880:CDS |
| ACAGGTCTTGGGAGCAACAC+AGG | 0.582966 | 6_1:-93525125 | Msa0898880:intron |
| ACAGGGACAGGAACTGGACA+TGG | 0.585426 | 6_1:-93524392 | Msa0898880:CDS |
| GGATATGGAACAACTGGTGT+TGG | 0.588692 | 6_1:-93524644 | Msa0898880:CDS |
| TATGGAAACCCCTTGAGCCA+AGG | 0.599812 | 6_1:-93525245 | Msa0898880:CDS |
| AAGGTGGTGATCAAACTGGT+AGG | 0.600281 | 6_1:-93525277 | Msa0898880:CDS |
| GGACAAGAGTATGGAAAAGA+GGG | 0.606312 | 6_1:-93524344 | Msa0898880:CDS |
| TCTAATGCAGGTGGTGTAGG+TGG | 0.606328 | 6_1:-93524845 | Msa0898880:intron |
| GTGGAACCGGGTATGGTACA+GGG | 0.606916 | 6_1:-93524802 | Msa0898880:CDS |
| CATGGAGTTGATCAAACCAC+AGG | 0.616647 | 6_1:-93525143 | Msa0898880:CDS |
| GGTGGTGTAGGTGGTTATGG+AGG | 0.618119 | 6_1:-93524836 | Msa0898880:CDS |
| TGTGTTGCTCCCAAGACCTG+TGG | 0.622846 | 6_1:+93525127 | None:intergenic |
| ATGGGACAGGAACAGGAACT+GGG | 0.626247 | 6_1:-93524544 | Msa0898880:CDS |
| GAACTGGACATGATAACAGA+GGG | 0.628252 | 6_1:-93524739 | Msa0898880:CDS |
| AGGTGGTGATCAAACTGGTA+GGG | 0.630608 | 6_1:-93525276 | Msa0898880:CDS |
| TGGTTTGATCAACTCCATGA+TGG | 0.631204 | 6_1:+93525147 | None:intergenic |
| TCAACAACATGGAGAGAAAG+GGG | 0.633909 | 6_1:-93524477 | Msa0898880:CDS |
| GCAATCCCATTAGTGGTGGT+GGG | 0.635724 | 6_1:-93525205 | Msa0898880:CDS |
| CTGCTAGTACTTATGGGACA+GGG | 0.654209 | 6_1:-93524670 | Msa0898880:CDS |
| ATACTTATGGGACAGGAACA+GGG | 0.655301 | 6_1:-93524409 | Msa0898880:CDS |
| GGTCATGGTCATCAACAACA+TGG | 0.657397 | 6_1:-93524488 | Msa0898880:CDS |
| ACTGGATCATGTACTGGACA+TGG | 0.658437 | 6_1:-93524245 | Msa0898880:CDS |
| TATGGAGGTACTGATGTTGG+TGG | 0.660350 | 6_1:-93524821 | Msa0898880:CDS |
| TATGGCAATCCCATTAGTGG+TGG | 0.666004 | 6_1:-93525209 | Msa0898880:CDS |
| GGACATGATGAGCAACACCT+TGG | 0.668375 | 6_1:-93524314 | Msa0898880:CDS |
| GGTGTTGGTCATCAACAACA+TGG | 0.679464 | 6_1:-93524629 | Msa0898880:CDS |
| GGAACTGGACATGATAACAG+AGG | 0.719077 | 6_1:-93524740 | Msa0898880:CDS |
| ACAATGTCTCAATATCAACA+AGG | 0.721195 | 6_1:-93525296 | Msa0898880:CDS |
| ATGTCTCAATATCAACAAGG+TGG | 0.725256 | 6_1:-93525293 | Msa0898880:CDS |
| AACTGGACATGATAACAGAG+GGG | 0.772871 | 6_1:-93524738 | Msa0898880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAAAATTAAGTAACA+TGG | + | chr6_1:93524570-93524589 | None:intergenic | 15.0% |
| !! | TTTCAAATTCAAATGATTAT+CGG | - | chr6_1:93524585-93524604 | Msa0898880:CDS | 15.0% |
| !! | TGAAAAAAAATTAAGTAACA+TGG | + | chr6_1:93524570-93524589 | None:intergenic | 15.0% |
| !! | TTTCAAATTCAAATGATTAT+CGG | - | chr6_1:93524585-93524604 | Msa0898880:CDS | 15.0% |
| ! | AAAATTAAGTAACATGGTGT+TGG | + | chr6_1:93524564-93524583 | None:intergenic | 25.0% |
| ! | CTAACATTTATATCTAATGC+AGG | - | chr6_1:93524665-93524684 | Msa0898880:CDS | 25.0% |
| ! | AAAATTAAGGAGAAAATTCC+TGG | - | chr6_1:93524815-93524834 | Msa0898880:CDS | 25.0% |
| ! | ACTCATGAACAAAATACTTA+TGG | - | chr6_1:93525100-93525119 | Msa0898880:intron | 25.0% |
| ! | CTCATGAACAAAATACTTAT+GGG | - | chr6_1:93525101-93525120 | Msa0898880:intron | 25.0% |
| ! | AGGGATTATGGAAAAAATTA+AGG | - | chr6_1:93525240-93525259 | Msa0898880:CDS | 25.0% |
| ! | AAAATTAAGTAACATGGTGT+TGG | + | chr6_1:93524564-93524583 | None:intergenic | 25.0% |
| ! | CTAACATTTATATCTAATGC+AGG | - | chr6_1:93524665-93524684 | Msa0898880:CDS | 25.0% |
| ! | AAAATTAAGGAGAAAATTCC+TGG | - | chr6_1:93524815-93524834 | Msa0898880:CDS | 25.0% |
| ! | ACTCATGAACAAAATACTTA+TGG | - | chr6_1:93525100-93525119 | Msa0898880:intron | 25.0% |
| ! | CTCATGAACAAAATACTTAT+GGG | - | chr6_1:93525101-93525120 | Msa0898880:intron | 25.0% |
| ! | AGGGATTATGGAAAAAATTA+AGG | - | chr6_1:93525240-93525259 | Msa0898880:CDS | 25.0% |
| ACATTTATATCTAATGCAGG+TGG | - | chr6_1:93524668-93524687 | Msa0898880:CDS | 30.0% | |
| AAAATGCTGCTAGTACTTAT+GGG | - | chr6_1:93524846-93524865 | Msa0898880:intron | 30.0% | |
| GCACTGAACAAAATACTTAT+GGG | - | chr6_1:93524960-93524979 | Msa0898880:intron | 30.0% | |
| AAAATTAAGGAGAAGATTCC+TGG | - | chr6_1:93525253-93525272 | Msa0898880:CDS | 30.0% | |
| ACATTTATATCTAATGCAGG+TGG | - | chr6_1:93524668-93524687 | Msa0898880:CDS | 30.0% | |
| AAAATGCTGCTAGTACTTAT+GGG | - | chr6_1:93524846-93524865 | Msa0898880:intron | 30.0% | |
| GCACTGAACAAAATACTTAT+GGG | - | chr6_1:93524960-93524979 | Msa0898880:intron | 30.0% | |
| AAAATTAAGGAGAAGATTCC+TGG | - | chr6_1:93525253-93525272 | Msa0898880:CDS | 30.0% | |
| ATGTCTCAATATCAACAAGG+TGG | - | chr6_1:93524229-93524248 | Msa0898880:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | + | chr6_1:93524303-93524322 | None:intergenic | 35.0% | |
| CAAAATGCTGCTAGTACTTA+TGG | - | chr6_1:93524845-93524864 | Msa0898880:intron | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | - | chr6_1:93524905-93524924 | Msa0898880:intron | 35.0% | |
| ! | TAAGTATTTTGTTCAGTGCC+AGG | + | chr6_1:93524959-93524978 | None:intergenic | 35.0% |
| ! | GGCACTGAACAAAATACTTA+TGG | - | chr6_1:93524959-93524978 | Msa0898880:intron | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | - | chr6_1:93524965-93524984 | Msa0898880:intron | 35.0% | |
| ATCAACAACATGGAGAGAAA+GGG | - | chr6_1:93525044-93525063 | Msa0898880:intron | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | - | chr6_1:93525076-93525095 | Msa0898880:intron | 35.0% | |
| ! | GTATTTTGTTCATGAGTACC+AGG | + | chr6_1:93525097-93525116 | None:intergenic | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | - | chr6_1:93524965-93524984 | Msa0898880:intron | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | - | chr6_1:93525221-93525240 | Msa0898880:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | + | chr6_1:93525228-93525247 | None:intergenic | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | - | chr6_1:93525228-93525247 | Msa0898880:CDS | 35.0% | |
| ATGTCTCAATATCAACAAGG+TGG | - | chr6_1:93524229-93524248 | Msa0898880:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | + | chr6_1:93524303-93524322 | None:intergenic | 35.0% | |
| CAAAATGCTGCTAGTACTTA+TGG | - | chr6_1:93524845-93524864 | Msa0898880:intron | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | - | chr6_1:93524905-93524924 | Msa0898880:intron | 35.0% | |
| ! | TAAGTATTTTGTTCAGTGCC+AGG | + | chr6_1:93524959-93524978 | None:intergenic | 35.0% |
| ! | GGCACTGAACAAAATACTTA+TGG | - | chr6_1:93524959-93524978 | Msa0898880:intron | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | - | chr6_1:93524965-93524984 | Msa0898880:intron | 35.0% | |
| ATCAACAACATGGAGAGAAA+GGG | - | chr6_1:93525044-93525063 | Msa0898880:intron | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | - | chr6_1:93525076-93525095 | Msa0898880:intron | 35.0% | |
| ! | GTATTTTGTTCATGAGTACC+AGG | + | chr6_1:93525097-93525116 | None:intergenic | 35.0% |
| GAACAAAATACTTATGGGAC+AGG | - | chr6_1:93524965-93524984 | Msa0898880:intron | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | - | chr6_1:93525221-93525240 | Msa0898880:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | + | chr6_1:93525228-93525247 | None:intergenic | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | - | chr6_1:93525228-93525247 | Msa0898880:CDS | 35.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | - | chr6_1:93524259-93524278 | Msa0898880:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | + | chr6_1:93524297-93524316 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | - | chr6_1:93524295-93524314 | Msa0898880:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | - | chr6_1:93524310-93524329 | Msa0898880:CDS | 40.0% | |
| TGGTTTGATCAACTCCATGA+TGG | + | chr6_1:93524378-93524397 | None:intergenic | 40.0% | |
| TTGATCAAACCACAGGTCTT+GGG | - | chr6_1:93524386-93524405 | Msa0898880:CDS | 40.0% | |
| ACAGGATATGAAACACACAC+TGG | - | chr6_1:93524427-93524446 | Msa0898880:CDS | 40.0% | |
| TATGAAACACACACTGGTAG+TGG | - | chr6_1:93524433-93524452 | Msa0898880:CDS | 40.0% | |
| ATGAAACACACACTGGTAGT+GGG | - | chr6_1:93524434-93524453 | Msa0898880:CDS | 40.0% | |
| ATATCTAATGCAGGTGGTGT+AGG | - | chr6_1:93524674-93524693 | Msa0898880:CDS | 40.0% | |
| GAACTGGACATGATAACAGA+GGG | - | chr6_1:93524783-93524802 | Msa0898880:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | - | chr6_1:93524784-93524803 | Msa0898880:CDS | 40.0% | |
| !! | AGGGGTAGTGGACAAAATTA+AGG | - | chr6_1:93524802-93524821 | Msa0898880:CDS | 40.0% |
| TGGAGAAAATAGAGGAGTTG+TGG | - | chr6_1:93524913-93524932 | Msa0898880:intron | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | - | chr6_1:93524938-93524957 | Msa0898880:intron | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | - | chr6_1:93524971-93524990 | Msa0898880:intron | 40.0% | |
| CATCAACAACATGGAGAGAA+AGG | - | chr6_1:93525043-93525062 | Msa0898880:intron | 40.0% | |
| TCAACAACATGGAGAGAAAG+GGG | - | chr6_1:93525045-93525064 | Msa0898880:intron | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | - | chr6_1:93524971-93524990 | Msa0898880:intron | 40.0% | |
| ATACTTATGGGACAGGAACA+GGG | - | chr6_1:93524972-93524991 | Msa0898880:intron | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | - | chr6_1:93525177-93525196 | Msa0898880:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | - | chr6_1:93525178-93525197 | Msa0898880:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | - | chr6_1:93525187-93525206 | Msa0898880:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | - | chr6_1:93525220-93525239 | Msa0898880:CDS | 40.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | - | chr6_1:93524259-93524278 | Msa0898880:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | + | chr6_1:93524297-93524316 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | - | chr6_1:93524295-93524314 | Msa0898880:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | - | chr6_1:93524310-93524329 | Msa0898880:CDS | 40.0% | |
| TGGTTTGATCAACTCCATGA+TGG | + | chr6_1:93524378-93524397 | None:intergenic | 40.0% | |
| TTGATCAAACCACAGGTCTT+GGG | - | chr6_1:93524386-93524405 | Msa0898880:CDS | 40.0% | |
| ACAGGATATGAAACACACAC+TGG | - | chr6_1:93524427-93524446 | Msa0898880:CDS | 40.0% | |
| TATGAAACACACACTGGTAG+TGG | - | chr6_1:93524433-93524452 | Msa0898880:CDS | 40.0% | |
| ATGAAACACACACTGGTAGT+GGG | - | chr6_1:93524434-93524453 | Msa0898880:CDS | 40.0% | |
| ATATCTAATGCAGGTGGTGT+AGG | - | chr6_1:93524674-93524693 | Msa0898880:CDS | 40.0% | |
| GAACTGGACATGATAACAGA+GGG | - | chr6_1:93524783-93524802 | Msa0898880:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | - | chr6_1:93524784-93524803 | Msa0898880:CDS | 40.0% | |
| !! | AGGGGTAGTGGACAAAATTA+AGG | - | chr6_1:93524802-93524821 | Msa0898880:CDS | 40.0% |
| TGGAGAAAATAGAGGAGTTG+TGG | - | chr6_1:93524913-93524932 | Msa0898880:intron | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | - | chr6_1:93524938-93524957 | Msa0898880:intron | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | - | chr6_1:93524971-93524990 | Msa0898880:intron | 40.0% | |
| CATCAACAACATGGAGAGAA+AGG | - | chr6_1:93525043-93525062 | Msa0898880:intron | 40.0% | |
| TCAACAACATGGAGAGAAAG+GGG | - | chr6_1:93525045-93525064 | Msa0898880:intron | 40.0% | |
| AATACTTATGGGACAGGAAC+AGG | - | chr6_1:93524971-93524990 | Msa0898880:intron | 40.0% | |
| ATACTTATGGGACAGGAACA+GGG | - | chr6_1:93524972-93524991 | Msa0898880:intron | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | - | chr6_1:93525177-93525196 | Msa0898880:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | - | chr6_1:93525178-93525197 | Msa0898880:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | - | chr6_1:93525187-93525206 | Msa0898880:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | - | chr6_1:93525220-93525239 | Msa0898880:CDS | 40.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | - | chr6_1:93524241-93524260 | Msa0898880:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | - | chr6_1:93524245-93524264 | Msa0898880:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | - | chr6_1:93524246-93524265 | Msa0898880:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | - | chr6_1:93524313-93524332 | Msa0898880:CDS | 45.0% | |
| ! | CAACTCCATGATGGTGTTGA+TGG | + | chr6_1:93524369-93524388 | None:intergenic | 45.0% |
| ! | CATGGAGTTGATCAAACCAC+AGG | - | chr6_1:93524379-93524398 | Msa0898880:CDS | 45.0% |
| GTTGATCAAACCACAGGTCT+TGG | - | chr6_1:93524385-93524404 | Msa0898880:CDS | 45.0% | |
| ! | TGAAACACACACTGGTAGTG+GGG | - | chr6_1:93524435-93524454 | Msa0898880:CDS | 45.0% |
| !! | GGTTATGGAGGTACTGATGT+TGG | - | chr6_1:93524698-93524717 | Msa0898880:CDS | 45.0% |
| !! | TATGGAGGTACTGATGTTGG+TGG | - | chr6_1:93524701-93524720 | Msa0898880:CDS | 45.0% |
| GGAACTGGACATGATAACAG+AGG | - | chr6_1:93524782-93524801 | Msa0898880:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | - | chr6_1:93524790-93524809 | Msa0898880:CDS | 45.0% | |
| !! | GCAGCATTTTGATCAGTACC+AGG | + | chr6_1:93524836-93524855 | None:intergenic | 45.0% |
| CTGCTAGTACTTATGGGACA+GGG | - | chr6_1:93524852-93524871 | Msa0898880:intron | 45.0% | |
| GGATATGGAACAACTGGTGT+TGG | - | chr6_1:93524878-93524897 | Msa0898880:intron | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | - | chr6_1:93524893-93524912 | Msa0898880:intron | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | - | chr6_1:93524925-93524944 | Msa0898880:intron | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | - | chr6_1:93525007-93525026 | Msa0898880:intron | 45.0% |
| GGTCATGGTCATCAACAACA+TGG | - | chr6_1:93525034-93525053 | Msa0898880:intron | 45.0% | |
| AGGGGTTGTGGACAAGATTA+AGG | - | chr6_1:93525063-93525082 | Msa0898880:intron | 45.0% | |
| ACTGGACATGGAACAACTAC+TGG | - | chr6_1:93525142-93525161 | Msa0898880:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | - | chr6_1:93525148-93525167 | Msa0898880:CDS | 45.0% |
| AAGGAGAAGATTCCTGGTAC+TGG | - | chr6_1:93525082-93525101 | Msa0898880:intron | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | - | chr6_1:93525277-93525296 | Msa0898880:CDS | 45.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | - | chr6_1:93524241-93524260 | Msa0898880:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | - | chr6_1:93524245-93524264 | Msa0898880:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | - | chr6_1:93524246-93524265 | Msa0898880:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | - | chr6_1:93524313-93524332 | Msa0898880:CDS | 45.0% | |
| ! | CAACTCCATGATGGTGTTGA+TGG | + | chr6_1:93524369-93524388 | None:intergenic | 45.0% |
| ! | CATGGAGTTGATCAAACCAC+AGG | - | chr6_1:93524379-93524398 | Msa0898880:CDS | 45.0% |
| GTTGATCAAACCACAGGTCT+TGG | - | chr6_1:93524385-93524404 | Msa0898880:CDS | 45.0% | |
| ! | TGAAACACACACTGGTAGTG+GGG | - | chr6_1:93524435-93524454 | Msa0898880:CDS | 45.0% |
| !! | GGTTATGGAGGTACTGATGT+TGG | - | chr6_1:93524698-93524717 | Msa0898880:CDS | 45.0% |
| !! | TATGGAGGTACTGATGTTGG+TGG | - | chr6_1:93524701-93524720 | Msa0898880:CDS | 45.0% |
| GGAACTGGACATGATAACAG+AGG | - | chr6_1:93524782-93524801 | Msa0898880:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | - | chr6_1:93524790-93524809 | Msa0898880:CDS | 45.0% | |
| !! | GCAGCATTTTGATCAGTACC+AGG | + | chr6_1:93524836-93524855 | None:intergenic | 45.0% |
| CTGCTAGTACTTATGGGACA+GGG | - | chr6_1:93524852-93524871 | Msa0898880:intron | 45.0% | |
| GGATATGGAACAACTGGTGT+TGG | - | chr6_1:93524878-93524897 | Msa0898880:intron | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | - | chr6_1:93524893-93524912 | Msa0898880:intron | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | - | chr6_1:93524925-93524944 | Msa0898880:intron | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | - | chr6_1:93525007-93525026 | Msa0898880:intron | 45.0% |
| GGTCATGGTCATCAACAACA+TGG | - | chr6_1:93525034-93525053 | Msa0898880:intron | 45.0% | |
| AGGGGTTGTGGACAAGATTA+AGG | - | chr6_1:93525063-93525082 | Msa0898880:intron | 45.0% | |
| ACTGGACATGGAACAACTAC+TGG | - | chr6_1:93525142-93525161 | Msa0898880:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | - | chr6_1:93525148-93525167 | Msa0898880:CDS | 45.0% |
| AAGGAGAAGATTCCTGGTAC+TGG | - | chr6_1:93525082-93525101 | Msa0898880:intron | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | - | chr6_1:93525277-93525296 | Msa0898880:CDS | 45.0% | |
| TATGGAAACCCCTTGAGCCA+AGG | - | chr6_1:93524277-93524296 | Msa0898880:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | + | chr6_1:93524289-93524308 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | + | chr6_1:93524290-93524309 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | - | chr6_1:93524317-93524336 | Msa0898880:CDS | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | + | chr6_1:93524325-93524344 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | + | chr6_1:93524326-93524345 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | - | chr6_1:93524325-93524344 | Msa0898880:CDS | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | - | chr6_1:93524340-93524359 | Msa0898880:CDS | 50.0% |
| GGACACCATCAACACCATCA+TGG | - | chr6_1:93524361-93524380 | Msa0898880:CDS | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | - | chr6_1:93524409-93524428 | Msa0898880:CDS | 50.0% |
| !! | GAAACACACACTGGTAGTGG+GGG | - | chr6_1:93524436-93524455 | Msa0898880:CDS | 50.0% |
| !! | AAACACACACTGGTAGTGGG+GGG | - | chr6_1:93524437-93524456 | Msa0898880:CDS | 50.0% |
| TCTAATGCAGGTGGTGTAGG+TGG | - | chr6_1:93524677-93524696 | Msa0898880:CDS | 50.0% | |
| !! | GGTACTGATGTTGGTGGAAC+CGG | - | chr6_1:93524707-93524726 | Msa0898880:CDS | 50.0% |
| ! | GTACTGATGTTGGTGGAACC+GGG | - | chr6_1:93524708-93524727 | Msa0898880:CDS | 50.0% |
| TATGGTACAGGGACAGGAAC+CGG | - | chr6_1:93524731-93524750 | Msa0898880:CDS | 50.0% | |
| GCTGCTAGTACTTATGGGAC+AGG | - | chr6_1:93524851-93524870 | Msa0898880:intron | 50.0% | |
| AGTACTTATGGGACAGGGAC+AGG | - | chr6_1:93524857-93524876 | Msa0898880:intron | 50.0% | |
| TATGGGACAGGGACAGGATA+TGG | - | chr6_1:93524863-93524882 | Msa0898880:intron | 50.0% | |
| GGGACAGGATATGGAACAAC+TGG | - | chr6_1:93524872-93524891 | Msa0898880:intron | 50.0% | |
| TATGGGACAGGAACAGGAAC+TGG | - | chr6_1:93524977-93524996 | Msa0898880:intron | 50.0% | |
| ATGGGACAGGAACAGGAACT+GGG | - | chr6_1:93524978-93524997 | Msa0898880:intron | 50.0% | |
| GGGCATGGAACAACTGGTTA+TGG | - | chr6_1:93524998-93525017 | Msa0898880:intron | 50.0% | |
| ACATGGAGAGAAAGGGGTTG+TGG | - | chr6_1:93525051-93525070 | Msa0898880:intron | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | - | chr6_1:93525157-93525176 | Msa0898880:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | - | chr6_1:93525169-93525188 | Msa0898880:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | - | chr6_1:93525208-93525227 | Msa0898880:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+AGG | + | chr6_1:93525274-93525293 | None:intergenic | 50.0% | |
| ! | CCTGGTACTGGATCATGTAC+TGG | - | chr6_1:93525271-93525290 | Msa0898880:CDS | 50.0% |
| TATGGAAACCCCTTGAGCCA+AGG | - | chr6_1:93524277-93524296 | Msa0898880:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | + | chr6_1:93524289-93524308 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | + | chr6_1:93524290-93524309 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | - | chr6_1:93524317-93524336 | Msa0898880:CDS | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | + | chr6_1:93524325-93524344 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | + | chr6_1:93524326-93524345 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | - | chr6_1:93524325-93524344 | Msa0898880:CDS | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | - | chr6_1:93524340-93524359 | Msa0898880:CDS | 50.0% |
| GGACACCATCAACACCATCA+TGG | - | chr6_1:93524361-93524380 | Msa0898880:CDS | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | - | chr6_1:93524409-93524428 | Msa0898880:CDS | 50.0% |
| !! | GAAACACACACTGGTAGTGG+GGG | - | chr6_1:93524436-93524455 | Msa0898880:CDS | 50.0% |
| !! | AAACACACACTGGTAGTGGG+GGG | - | chr6_1:93524437-93524456 | Msa0898880:CDS | 50.0% |
| TCTAATGCAGGTGGTGTAGG+TGG | - | chr6_1:93524677-93524696 | Msa0898880:CDS | 50.0% | |
| !! | GGTACTGATGTTGGTGGAAC+CGG | - | chr6_1:93524707-93524726 | Msa0898880:CDS | 50.0% |
| ! | GTACTGATGTTGGTGGAACC+GGG | - | chr6_1:93524708-93524727 | Msa0898880:CDS | 50.0% |
| TATGGTACAGGGACAGGAAC+CGG | - | chr6_1:93524731-93524750 | Msa0898880:CDS | 50.0% | |
| GCTGCTAGTACTTATGGGAC+AGG | - | chr6_1:93524851-93524870 | Msa0898880:intron | 50.0% | |
| AGTACTTATGGGACAGGGAC+AGG | - | chr6_1:93524857-93524876 | Msa0898880:intron | 50.0% | |
| TATGGGACAGGGACAGGATA+TGG | - | chr6_1:93524863-93524882 | Msa0898880:intron | 50.0% | |
| GGGACAGGATATGGAACAAC+TGG | - | chr6_1:93524872-93524891 | Msa0898880:intron | 50.0% | |
| TATGGGACAGGAACAGGAAC+TGG | - | chr6_1:93524977-93524996 | Msa0898880:intron | 50.0% | |
| ATGGGACAGGAACAGGAACT+GGG | - | chr6_1:93524978-93524997 | Msa0898880:intron | 50.0% | |
| GGGCATGGAACAACTGGTTA+TGG | - | chr6_1:93524998-93525017 | Msa0898880:intron | 50.0% | |
| ACATGGAGAGAAAGGGGTTG+TGG | - | chr6_1:93525051-93525070 | Msa0898880:intron | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | - | chr6_1:93525157-93525176 | Msa0898880:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | - | chr6_1:93525169-93525188 | Msa0898880:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | - | chr6_1:93525208-93525227 | Msa0898880:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+AGG | + | chr6_1:93525274-93525293 | None:intergenic | 50.0% | |
| ! | CCTGGTACTGGATCATGTAC+TGG | - | chr6_1:93525271-93525290 | Msa0898880:CDS | 50.0% |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | + | chr6_1:93524288-93524307 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | - | chr6_1:93524316-93524335 | Msa0898880:CDS | 55.0% | |
| ! | TGTGTTGCTCCCAAGACCTG+TGG | + | chr6_1:93524398-93524417 | None:intergenic | 55.0% |
| ACAGGTCTTGGGAGCAACAC+AGG | - | chr6_1:93524397-93524416 | Msa0898880:CDS | 55.0% | |
| CTTGGGAGCAACACAGGTAC+TGG | - | chr6_1:93524403-93524422 | Msa0898880:CDS | 55.0% | |
| !! | AACACACACTGGTAGTGGGG+GGG | - | chr6_1:93524438-93524457 | Msa0898880:CDS | 55.0% |
| GCAGGTGGTGTAGGTGGTTA+TGG | - | chr6_1:93524683-93524702 | Msa0898880:CDS | 55.0% | |
| GGTGGTGTAGGTGGTTATGG+AGG | - | chr6_1:93524686-93524705 | Msa0898880:CDS | 55.0% | |
| ! | GATGTTGGTGGAACCGGGTA+TGG | - | chr6_1:93524713-93524732 | Msa0898880:CDS | 55.0% |
| GTGGAACCGGGTATGGTACA+GGG | - | chr6_1:93524720-93524739 | Msa0898880:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | + | chr6_1:93524729-93524748 | None:intergenic | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | + | chr6_1:93524753-93524772 | None:intergenic | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | - | chr6_1:93524755-93524774 | Msa0898880:CDS | 55.0% | |
| ACAGGAACAGGAACTGGGCA+TGG | - | chr6_1:93524983-93525002 | Msa0898880:intron | 55.0% | |
| GGAACTGGGCATGGAACAAC+TGG | - | chr6_1:93524992-93525011 | Msa0898880:intron | 55.0% | |
| !! | GGTTATGGTGCTACTGGTGC+TGG | - | chr6_1:93525013-93525032 | Msa0898880:intron | 55.0% |
| TATGGGACAGGAACAGGGAC+AGG | - | chr6_1:93525118-93525137 | Msa0898880:intron | 55.0% | |
| ACAGGAACAGGGACAGGAAC+TGG | - | chr6_1:93525124-93525143 | Msa0898880:intron | 55.0% | |
| ACAGGGACAGGAACTGGACA+TGG | - | chr6_1:93525130-93525149 | Msa0898880:CDS | 55.0% | |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | + | chr6_1:93524288-93524307 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | - | chr6_1:93524316-93524335 | Msa0898880:CDS | 55.0% | |
| ! | TGTGTTGCTCCCAAGACCTG+TGG | + | chr6_1:93524398-93524417 | None:intergenic | 55.0% |
| ACAGGTCTTGGGAGCAACAC+AGG | - | chr6_1:93524397-93524416 | Msa0898880:CDS | 55.0% | |
| CTTGGGAGCAACACAGGTAC+TGG | - | chr6_1:93524403-93524422 | Msa0898880:CDS | 55.0% | |
| !! | AACACACACTGGTAGTGGGG+GGG | - | chr6_1:93524438-93524457 | Msa0898880:CDS | 55.0% |
| GCAGGTGGTGTAGGTGGTTA+TGG | - | chr6_1:93524683-93524702 | Msa0898880:CDS | 55.0% | |
| GGTGGTGTAGGTGGTTATGG+AGG | - | chr6_1:93524686-93524705 | Msa0898880:CDS | 55.0% | |
| ! | GATGTTGGTGGAACCGGGTA+TGG | - | chr6_1:93524713-93524732 | Msa0898880:CDS | 55.0% |
| GTGGAACCGGGTATGGTACA+GGG | - | chr6_1:93524720-93524739 | Msa0898880:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | + | chr6_1:93524729-93524748 | None:intergenic | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | + | chr6_1:93524753-93524772 | None:intergenic | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | - | chr6_1:93524755-93524774 | Msa0898880:CDS | 55.0% | |
| ACAGGAACAGGAACTGGGCA+TGG | - | chr6_1:93524983-93525002 | Msa0898880:intron | 55.0% | |
| GGAACTGGGCATGGAACAAC+TGG | - | chr6_1:93524992-93525011 | Msa0898880:intron | 55.0% | |
| !! | GGTTATGGTGCTACTGGTGC+TGG | - | chr6_1:93525013-93525032 | Msa0898880:intron | 55.0% |
| TATGGGACAGGAACAGGGAC+AGG | - | chr6_1:93525118-93525137 | Msa0898880:intron | 55.0% | |
| ACAGGAACAGGGACAGGAAC+TGG | - | chr6_1:93525124-93525143 | Msa0898880:intron | 55.0% | |
| ACAGGGACAGGAACTGGACA+TGG | - | chr6_1:93525130-93525149 | Msa0898880:CDS | 55.0% | |
| !! | GGTGGGATGACTGGTGCTAC+TGG | - | chr6_1:93524334-93524353 | Msa0898880:CDS | 60.0% |
| GGTGGAACCGGGTATGGTAC+AGG | - | chr6_1:93524719-93524738 | Msa0898880:CDS | 60.0% | |
| ACCGGGTATGGTACAGGGAC+AGG | - | chr6_1:93524725-93524744 | Msa0898880:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | - | chr6_1:93524740-93524759 | Msa0898880:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | - | chr6_1:93524746-93524765 | Msa0898880:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | - | chr6_1:93524758-93524777 | Msa0898880:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | + | chr6_1:93524762-93524781 | None:intergenic | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | - | chr6_1:93524761-93524780 | Msa0898880:CDS | 60.0% | |
| !! | GGTGCTACTGGTGCTGGTCA+TGG | - | chr6_1:93525019-93525038 | Msa0898880:intron | 60.0% |
| !! | GGTGGGATGACTGGTGCTAC+TGG | - | chr6_1:93524334-93524353 | Msa0898880:CDS | 60.0% |
| GGTGGAACCGGGTATGGTAC+AGG | - | chr6_1:93524719-93524738 | Msa0898880:CDS | 60.0% | |
| ACCGGGTATGGTACAGGGAC+AGG | - | chr6_1:93524725-93524744 | Msa0898880:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | - | chr6_1:93524740-93524759 | Msa0898880:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | - | chr6_1:93524746-93524765 | Msa0898880:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | - | chr6_1:93524758-93524777 | Msa0898880:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | + | chr6_1:93524762-93524781 | None:intergenic | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | - | chr6_1:93524761-93524780 | Msa0898880:CDS | 60.0% | |
| !! | GGTGCTACTGGTGCTGGTCA+TGG | - | chr6_1:93525019-93525038 | Msa0898880:intron | 60.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | - | chr6_1:93524767-93524786 | Msa0898880:CDS | 65.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | - | chr6_1:93524767-93524786 | Msa0898880:CDS | 65.0% |
| !! | GGTAGTGGGGGGGCTCACAC+AGG | - | chr6_1:93524448-93524467 | Msa0898880:CDS | 70.0% |
| !! | GGTAGTGGGGGGGCTCACAC+AGG | - | chr6_1:93524448-93524467 | Msa0898880:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 93524229 | 93525315 | 93524229 | ID=Msa0898880;Name=Msa0898880 |
| chr6_1 | mRNA | 93524229 | 93525315 | 93524229 | ID=Msa0898880-mRNA-1;Parent=Msa0898880;Name=Msa0898880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0|1|1|1|2|0|272 |
| chr6_1 | exon | 93525126 | 93525315 | 93525126 | ID=Msa0898880-mRNA-1:exon:15894;Parent=Msa0898880-mRNA-1 |
| chr6_1 | exon | 93524229 | 93524857 | 93524229 | ID=Msa0898880-mRNA-1:exon:15893;Parent=Msa0898880-mRNA-1 |
| chr6_1 | CDS | 93525126 | 93525315 | 93525126 | ID=Msa0898880-mRNA-1:cds;Parent=Msa0898880-mRNA-1 |
| chr6_1 | CDS | 93524229 | 93524857 | 93524229 | ID=Msa0898880-mRNA-1:cds;Parent=Msa0898880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
