Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928010 | AEV52288.1 | 75.082 | 305 | 0 | 4 | 1 | 229 | 1 | 305 | 1.85e-127 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928010 | sp|P28641|DHN3_PEA | 63.636 | 99 | 29 | 5 | 130 | 224 | 137 | 232 | 1.04e-21 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072170 | Msa0928010 | 0.814370 | 1.595136e-51 | -8.615850e-47 |
| Msa0120540 | Msa0928010 | 0.813718 | 2.221500e-51 | -8.615850e-47 |
| Msa0614990 | Msa0928010 | 0.832165 | 1.104228e-55 | -8.615850e-47 |
| Msa0626940 | Msa0928010 | 0.802103 | 6.575190e-49 | -8.615850e-47 |
| Msa0669720 | Msa0928010 | 0.836193 | 1.079917e-56 | -8.615850e-47 |
| Msa0669760 | Msa0928010 | 0.816055 | 6.735004e-52 | -8.615850e-47 |
| Msa0683140 | Msa0928010 | 0.802986 | 4.323158e-49 | -8.615850e-47 |
| Msa0190120 | Msa0928010 | 0.821552 | 3.800850e-53 | -8.615850e-47 |
| Msa0215790 | Msa0928010 | 0.805855 | 1.091037e-49 | -8.615850e-47 |
| Msa0379410 | Msa0928010 | 0.802470 | 5.526146e-49 | -8.615850e-47 |
| Msa0387910 | Msa0928010 | 0.814673 | 1.366952e-51 | -8.615850e-47 |
| Msa0266210 | Msa0928010 | 0.803376 | 3.591478e-49 | -8.615850e-47 |
| Msa0271890 | Msa0928010 | 0.807083 | 6.009886e-50 | -8.615850e-47 |
| Msa0333630 | Msa0928010 | 0.807421 | 5.095858e-50 | -8.615850e-47 |
| Msa0534900 | Msa0928010 | 0.800274 | 1.556675e-48 | -8.615850e-47 |
| Msa0579370 | Msa0928010 | 0.844268 | 8.396988e-59 | -8.615850e-47 |
| Msa0898860 | Msa0928010 | 0.873995 | 9.543817e-68 | -8.615850e-47 |
| Msa0898880 | Msa0928010 | 0.871828 | 5.073169e-67 | -8.615850e-47 |
| Msa0928010 | Msa0928030 | 0.894042 | 3.574912e-75 | -8.615850e-47 |
| Msa0928010 | Msa0964430 | 0.853930 | 1.724922e-61 | -8.615850e-47 |
| Msa0928010 | Msa0964460 | 0.832271 | 1.039883e-55 | -8.615850e-47 |
| Msa0928010 | Msa0998700 | 0.948879 | 3.922538e-107 | -8.615850e-47 |
| Msa0928010 | Msa1036270 | 0.825134 | 5.530443e-54 | -8.615850e-47 |
| Msa0928010 | Msa1076540 | 0.805513 | 1.287243e-49 | -8.615850e-47 |
| Msa0928010 | Msa1260130 | 0.803519 | 3.353246e-49 | -8.615850e-47 |
| Msa0928010 | Msa1299010 | 0.803119 | 4.059237e-49 | -8.615850e-47 |
| Msa0928010 | Msa1338610 | 0.855990 | 4.354263e-62 | -8.615850e-47 |
| Msa0928010 | Msa1340180 | 0.815384 | 9.506003e-52 | -8.615850e-47 |
| Msa0928010 | Msa1373800 | 0.823603 | 1.266985e-53 | -8.615850e-47 |
| Msa0928010 | Msa1452470 | 0.802472 | 5.521210e-49 | -8.615850e-47 |
| Msa0928010 | Msa1465960 | 0.809976 | 1.449726e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928010 | MtrunA17_Chr6g0484671 | 55.249 | 181 | 50 | 4 | 63 | 226 | 144 | 310 | 3.00e-29 | 111 |
| Msa0928010 | MtrunA17_Chr6g0484671 | 40.586 | 239 | 83 | 7 | 1 | 218 | 1 | 201 | 9.48e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACTGAACAAAATATTTA+TGG | 0.176291 | 6_2:+72758658 | Msa0928010:CDS |
| AGGAGCTGTGGACAAGATTA+AGG | 0.291835 | 6_2:+72758624 | Msa0928010:CDS |
| GCATCCATATACACACATTA+TGG | 0.295973 | 6_2:-72758892 | None:intergenic |
| CCAGTTCCAGTTCCAGTTCC+AGG | 0.298238 | 6_2:-72758466 | None:intergenic |
| AAAATTCCTGGCACTGGAAC+TGG | 0.317217 | 6_2:+72758319 | Msa0928010:CDS |
| ACTGGTAGGGTTGATGAATA+TGG | 0.317246 | 6_2:+72757765 | Msa0928010:CDS |
| CCTGGCACTGGAACTGGAAC+TGG | 0.334665 | 6_2:+72758325 | Msa0928010:CDS |
| CCTGGAACTGGAACTGGAAC+TGG | 0.334665 | 6_2:+72758466 | Msa0928010:CDS |
| AGTCATCCCACCACCACTAA+TGG | 0.343093 | 6_2:-72757829 | None:intergenic |
| AGGGGTAGTGGACAAGATTA+AGG | 0.345858 | 6_2:+72758294 | Msa0928010:CDS |
| AATATTTATGGGACAGGAAC+TGG | 0.353642 | 6_2:+72758670 | Msa0928010:CDS |
| AGCTCCATAGCCGGTTGTTC+CGG | 0.355691 | 6_2:-72758242 | None:intergenic |
| AAGATTCCTGGAACTGGAAC+TGG | 0.359093 | 6_2:+72758460 | Msa0928010:CDS |
| GGAGCTACAGGTGGCGGAAC+TGG | 0.372221 | 6_2:+72758259 | Msa0928010:CDS |
| AAGATTAAGGAGAAAATTCC+TGG | 0.378788 | 6_2:+72758307 | Msa0928010:CDS |
| AAGATCAAGGAGAAGATTCC+TGG | 0.387597 | 6_2:+72758448 | Msa0928010:CDS |
| GTACTGAACAAAATATTTAT+GGG | 0.388760 | 6_2:+72758659 | Msa0928010:CDS |
| GGAAGCACTGGACAAGAGTA+TGG | 0.391237 | 6_2:+72758751 | Msa0928010:CDS |
| ACTGGAACTGGAACTGGAAC+AGG | 0.408098 | 6_2:+72758331 | Msa0928010:CDS |
| ACTGGAACTGGAACTGGAAC+AGG | 0.409631 | 6_2:+72758472 | Msa0928010:CDS |
| CAAGGCCAAGTTGATCAATA+TGG | 0.416063 | 6_2:+72757801 | Msa0928010:CDS |
| ACTGGACATGGGACAGGAAC+AGG | 0.419165 | 6_2:+72758694 | Msa0928010:CDS |
| CATATTGATCAACTTGGCCT+TGG | 0.419277 | 6_2:-72757800 | None:intergenic |
| TATGGTACAGGGACAGGAAC+CGG | 0.420603 | 6_2:+72758223 | Msa0928010:CDS |
| AAAATTAAGGAGAAGATTCC+TGG | 0.424067 | 6_2:+72758835 | Msa0928010:CDS |
| GGTAATGATATTGATGGAAC+CGG | 0.427999 | 6_2:+72758199 | Msa0928010:intron |
| AAGGAGAAGATTCCTGGAAC+TGG | 0.429498 | 6_2:+72758454 | Msa0928010:CDS |
| ATCAACTTGGCCTTGGCTCA+AGG | 0.433377 | 6_2:-72757793 | None:intergenic |
| GTCATCCCACCACCACTAAT+GGG | 0.445577 | 6_2:-72757828 | None:intergenic |
| CATGGGACAGGAACAGGAAC+TGG | 0.449758 | 6_2:+72758700 | Msa0928010:CDS |
| GGAACAGGTCGTGGAACAAC+TGG | 0.455989 | 6_2:+72758346 | Msa0928010:CDS |
| TCAACTTGGCCTTGGCTCAA+GGG | 0.457612 | 6_2:-72757792 | None:intergenic |
| CAACTTGGCCTTGGCTCAAG+GGG | 0.457999 | 6_2:-72757791 | None:intergenic |
| GATATTGATGGAACCGGGTA+TGG | 0.458419 | 6_2:+72758205 | Msa0928010:CDS |
| TATGGGACAGGAACTGGAAC+TGG | 0.458973 | 6_2:+72758676 | Msa0928010:CDS |
| GGAACAGGTCATGGAACAAC+TGG | 0.460620 | 6_2:+72758535 | Msa0928010:intron |
| TCACCTCATGTATCTATATG+AGG | 0.460675 | 6_2:+72759034 | Msa0928010:three_prime_UTR |
| ACAGGAACTGGAACTGGACA+TGG | 0.462551 | 6_2:+72758682 | Msa0928010:CDS |
| GGGACAGGAACCGGAACAAC+CGG | 0.462844 | 6_2:+72758232 | Msa0928010:CDS |
| AAGATTAAGGAGAAGATTCC+TGG | 0.468840 | 6_2:+72758637 | Msa0928010:CDS |
| AAGGAGAAGATTCCTGGTAC+TGG | 0.469022 | 6_2:+72758841 | Msa0928010:CDS |
| GGTCATGGAACAACTGGTTA+TGG | 0.473670 | 6_2:+72758541 | Msa0928010:intron |
| CCAGTTCCAGTTCCAGTGCC+AGG | 0.475451 | 6_2:-72758325 | None:intergenic |
| GATGGAACCGGGTATGGTAC+AGG | 0.478285 | 6_2:+72758211 | Msa0928010:CDS |
| ACCGGGTATGGTACAGGGAC+AGG | 0.478921 | 6_2:+72758217 | Msa0928010:CDS |
| CTATATGAGGTGTATAATGA+TGG | 0.483538 | 6_2:+72759047 | Msa0928010:three_prime_UTR |
| CAACAAGGTGGTGATCAAAC+TGG | 0.483657 | 6_2:+72757747 | Msa0928010:CDS |
| CATGGACATGGAACAACTAC+TGG | 0.485597 | 6_2:+72758724 | Msa0928010:CDS |
| AAGGAGAAAATTCCTGGCAC+TGG | 0.489221 | 6_2:+72758313 | Msa0928010:CDS |
| ACTGGAACTGGAACAGGTCG+TGG | 0.491588 | 6_2:+72758337 | Msa0928010:CDS |
| GATGTTGGTCATGGAACAAC+TGG | 0.494534 | 6_2:+72758571 | Msa0928010:CDS |
| GGTCGTGGAACAACTGGTTA+TGG | 0.505394 | 6_2:+72758352 | Msa0928010:CDS |
| CCAGTACATGATCCAGTACC+AGG | 0.505527 | 6_2:-72758853 | None:intergenic |
| GGAACCGGAACAACCGGCTA+TGG | 0.510275 | 6_2:+72758238 | Msa0928010:CDS |
| CATGGAACAACTACTGGCTA+TGG | 0.511666 | 6_2:+72758730 | Msa0928010:CDS |
| AGGAGTTGTGGACAAGATCA+AGG | 0.513775 | 6_2:+72758435 | Msa0928010:intron |
| CAATATGGCAATCCCATTAG+TGG | 0.515585 | 6_2:+72757816 | Msa0928010:CDS |
| TAGAATAAATATGTGTGTAT+TGG | 0.515610 | 6_2:+72758948 | Msa0928010:three_prime_UTR |
| TATGGAGGTAATGATATTGA+TGG | 0.516426 | 6_2:+72758193 | Msa0928010:intron |
| CCTGGTACTGGATCATGTAC+TGG | 0.516603 | 6_2:+72758853 | Msa0928010:CDS |
| ACATGATAACAGAGGGGTAG+TGG | 0.519568 | 6_2:+72758282 | Msa0928010:CDS |
| ACTGGAACTGGACATGGGAC+AGG | 0.531309 | 6_2:+72758688 | Msa0928010:CDS |
| TATGGAAAAGAGGGTCATCA+TGG | 0.533254 | 6_2:+72758769 | Msa0928010:CDS |
| ACTACTGGCTATGGAAGCAC+TGG | 0.536598 | 6_2:+72758739 | Msa0928010:CDS |
| GAACAAAATATTTATGGGAC+AGG | 0.539035 | 6_2:+72758664 | Msa0928010:CDS |
| GATTGCCATATTGATCAACT+TGG | 0.539982 | 6_2:-72757806 | None:intergenic |
| GCCACCTGTAGCTCCATAGC+CGG | 0.542385 | 6_2:-72758251 | None:intergenic |
| GGCTATGGAGCTACAGGTGG+CGG | 0.544468 | 6_2:+72758253 | Msa0928010:CDS |
| TGGACAAGAGTATGGAAAAG+AGG | 0.546793 | 6_2:+72758759 | Msa0928010:CDS |
| CAACAACATGGAGATAATAG+AGG | 0.547854 | 6_2:+72758604 | Msa0928010:CDS |
| TGGAGAAAATAGAGGAGTTG+TGG | 0.548338 | 6_2:+72758423 | Msa0928010:intron |
| ACAACCGGCTATGGAGCTAC+AGG | 0.564829 | 6_2:+72758247 | Msa0928010:CDS |
| GGTTATGGTGCTACTGATGT+TGG | 0.578797 | 6_2:+72758556 | Msa0928010:CDS |
| ACAGGAACAGGAACTGGACA+TGG | 0.585426 | 6_2:+72758706 | Msa0928010:CDS |
| ACAGGAACTGGACATGGACA+TGG | 0.591800 | 6_2:+72758712 | Msa0928010:CDS |
| TATGGAAACCCCTTGAGCCA+AGG | 0.599812 | 6_2:+72757783 | Msa0928010:CDS |
| AAGGTGGTGATCAAACTGGT+AGG | 0.600281 | 6_2:+72757751 | Msa0928010:CDS |
| GGACAAGAGTATGGAAAAGA+GGG | 0.606312 | 6_2:+72758760 | Msa0928010:CDS |
| TGGAGATAATAGAGGAGCTG+TGG | 0.607582 | 6_2:+72758612 | Msa0928010:CDS |
| ATGGAACCGGGTATGGTACA+GGG | 0.613026 | 6_2:+72758212 | Msa0928010:CDS |
| GGTGCTACTGATGTTGGTCA+TGG | 0.613547 | 6_2:+72758562 | Msa0928010:CDS |
| CAGGAACTGGAACTGGACAT+GGG | 0.614592 | 6_2:+72758683 | Msa0928010:CDS |
| GGTCATGGAACAACTGGTGT+TGG | 0.623411 | 6_2:+72758577 | Msa0928010:CDS |
| GAACTGGACATGATAACAGA+GGG | 0.628252 | 6_2:+72758275 | Msa0928010:CDS |
| AGGTGGTGATCAAACTGGTA+GGG | 0.630608 | 6_2:+72757752 | Msa0928010:CDS |
| ACTGGATCATGTACTGGACA+TGG | 0.658437 | 6_2:+72758859 | Msa0928010:CDS |
| GTAATGATATTGATGGAACC+GGG | 0.667858 | 6_2:+72758200 | Msa0928010:CDS |
| GGACATGATGAGCAACACCT+TGG | 0.668375 | 6_2:+72758790 | Msa0928010:CDS |
| GGTGTTGGTCATCAACAACA+TGG | 0.679464 | 6_2:+72758592 | Msa0928010:CDS |
| ACACCTCATATAGATACATG+AGG | 0.703966 | 6_2:-72759037 | None:intergenic |
| GGAACTGGACATGATAACAG+AGG | 0.719077 | 6_2:+72758274 | Msa0928010:CDS |
| ACAATGTCTCAATATCAACA+AGG | 0.721195 | 6_2:+72757732 | Msa0928010:exon |
| ATGTCTCAATATCAACAAGG+TGG | 0.725256 | 6_2:+72757735 | Msa0928010:CDS |
| AACTGGACATGATAACAGAG+GGG | 0.772871 | 6_2:+72758276 | Msa0928010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAAATTCAAATGATTAT+CGG | + | chr6_2:72758083-72758102 | Msa0928010:intron | 15.0% |
| !! | TTTCAAATTCAAATGATTAT+CGG | + | chr6_2:72758083-72758102 | Msa0928010:intron | 15.0% |
| !! | GTACTGAACAAAATATTTAT+GGG | + | chr6_2:72758659-72758678 | Msa0928010:CDS | 20.0% |
| !! | TAGAATAAATATGTGTGTAT+TGG | + | chr6_2:72758948-72758967 | Msa0928010:three_prime_UTR | 20.0% |
| !! | GTACTGAACAAAATATTTAT+GGG | + | chr6_2:72758659-72758678 | Msa0928010:CDS | 20.0% |
| !! | TAGAATAAATATGTGTGTAT+TGG | + | chr6_2:72758948-72758967 | Msa0928010:three_prime_UTR | 20.0% |
| !!! | TTTTGTTTTCTTGGTTTGTA+AGG | - | chr6_2:72757674-72757693 | None:intergenic | 25.0% |
| ! | CTAACATTTATATCTAATGC+AGG | + | chr6_2:72758163-72758182 | Msa0928010:intron | 25.0% |
| !! | TAAATATTTTGTTCAGTACC+AGG | - | chr6_2:72758658-72758677 | None:intergenic | 25.0% |
| !! | GGTACTGAACAAAATATTTA+TGG | + | chr6_2:72758658-72758677 | Msa0928010:CDS | 25.0% |
| ! | AGGGATTATGGAAAAAATTA+AGG | + | chr6_2:72758822-72758841 | Msa0928010:CDS | 25.0% |
| ! | TAAACCATAATGTGTGTATA+TGG | + | chr6_2:72758888-72758907 | Msa0928010:intron | 25.0% |
| !!! | TTTTGTTTTCTTGGTTTGTA+AGG | - | chr6_2:72757674-72757693 | None:intergenic | 25.0% |
| ! | CTAACATTTATATCTAATGC+AGG | + | chr6_2:72758163-72758182 | Msa0928010:intron | 25.0% |
| !! | TAAATATTTTGTTCAGTACC+AGG | - | chr6_2:72758658-72758677 | None:intergenic | 25.0% |
| !! | GGTACTGAACAAAATATTTA+TGG | + | chr6_2:72758658-72758677 | Msa0928010:CDS | 25.0% |
| ! | AGGGATTATGGAAAAAATTA+AGG | + | chr6_2:72758822-72758841 | Msa0928010:CDS | 25.0% |
| ! | TAAACCATAATGTGTGTATA+TGG | + | chr6_2:72758888-72758907 | Msa0928010:intron | 25.0% |
| !!! | AACGTGAAGTTTTGTTTTCT+TGG | - | chr6_2:72757683-72757702 | None:intergenic | 30.0% |
| ACAATGTCTCAATATCAACA+AGG | + | chr6_2:72757732-72757751 | Msa0928010:exon | 30.0% | |
| TAGACTAATTAGTTACCTGT+GGG | - | chr6_2:72757966-72757985 | None:intergenic | 30.0% | |
| TTAGACTAATTAGTTACCTG+TGG | - | chr6_2:72757967-72757986 | None:intergenic | 30.0% | |
| ACATTTATATCTAATGCAGG+TGG | + | chr6_2:72758166-72758185 | Msa0928010:intron | 30.0% | |
| TATGGAGGTAATGATATTGA+TGG | + | chr6_2:72758193-72758212 | Msa0928010:intron | 30.0% | |
| AAGATTAAGGAGAAAATTCC+TGG | + | chr6_2:72758307-72758326 | Msa0928010:CDS | 30.0% | |
| GAACAAAATATTTATGGGAC+AGG | + | chr6_2:72758664-72758683 | Msa0928010:CDS | 30.0% | |
| AAAATTAAGGAGAAGATTCC+TGG | + | chr6_2:72758835-72758854 | Msa0928010:CDS | 30.0% | |
| !!! | ACTTCTGTTTTTGAGTAAGT+TGG | + | chr6_2:72758991-72759010 | Msa0928010:three_prime_UTR | 30.0% |
| CTATATGAGGTGTATAATGA+TGG | + | chr6_2:72759047-72759066 | Msa0928010:three_prime_UTR | 30.0% | |
| !!! | AACGTGAAGTTTTGTTTTCT+TGG | - | chr6_2:72757683-72757702 | None:intergenic | 30.0% |
| ACAATGTCTCAATATCAACA+AGG | + | chr6_2:72757732-72757751 | Msa0928010:exon | 30.0% | |
| TAGACTAATTAGTTACCTGT+GGG | - | chr6_2:72757966-72757985 | None:intergenic | 30.0% | |
| TTAGACTAATTAGTTACCTG+TGG | - | chr6_2:72757967-72757986 | None:intergenic | 30.0% | |
| ACATTTATATCTAATGCAGG+TGG | + | chr6_2:72758166-72758185 | Msa0928010:intron | 30.0% | |
| TATGGAGGTAATGATATTGA+TGG | + | chr6_2:72758193-72758212 | Msa0928010:intron | 30.0% | |
| AAGATTAAGGAGAAAATTCC+TGG | + | chr6_2:72758307-72758326 | Msa0928010:CDS | 30.0% | |
| GAACAAAATATTTATGGGAC+AGG | + | chr6_2:72758664-72758683 | Msa0928010:CDS | 30.0% | |
| AAAATTAAGGAGAAGATTCC+TGG | + | chr6_2:72758835-72758854 | Msa0928010:CDS | 30.0% | |
| !!! | ACTTCTGTTTTTGAGTAAGT+TGG | + | chr6_2:72758991-72759010 | Msa0928010:three_prime_UTR | 30.0% |
| CTATATGAGGTGTATAATGA+TGG | + | chr6_2:72759047-72759066 | Msa0928010:three_prime_UTR | 30.0% | |
| ATGTCTCAATATCAACAAGG+TGG | + | chr6_2:72757735-72757754 | Msa0928010:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | - | chr6_2:72757809-72757828 | None:intergenic | 35.0% | |
| TTTATATCTAATGCAGGTGG+TGG | + | chr6_2:72758169-72758188 | Msa0928010:intron | 35.0% | |
| GGTAATGATATTGATGGAAC+CGG | + | chr6_2:72758199-72758218 | Msa0928010:intron | 35.0% | |
| GTAATGATATTGATGGAACC+GGG | + | chr6_2:72758200-72758219 | Msa0928010:CDS | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | + | chr6_2:72758415-72758434 | Msa0928010:intron | 35.0% | |
| CAACAACATGGAGATAATAG+AGG | + | chr6_2:72758604-72758623 | Msa0928010:CDS | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | + | chr6_2:72758637-72758656 | Msa0928010:CDS | 35.0% | |
| AATATTTATGGGACAGGAAC+TGG | + | chr6_2:72758670-72758689 | Msa0928010:CDS | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | + | chr6_2:72758803-72758822 | Msa0928010:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | - | chr6_2:72758810-72758829 | None:intergenic | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | + | chr6_2:72758810-72758829 | Msa0928010:CDS | 35.0% | |
| GCATCCATATACACACATTA+TGG | - | chr6_2:72758895-72758914 | None:intergenic | 35.0% | |
| TCACCTCATGTATCTATATG+AGG | + | chr6_2:72759034-72759053 | Msa0928010:three_prime_UTR | 35.0% | |
| ACACCTCATATAGATACATG+AGG | - | chr6_2:72759040-72759059 | None:intergenic | 35.0% | |
| ATGTCTCAATATCAACAAGG+TGG | + | chr6_2:72757735-72757754 | Msa0928010:CDS | 35.0% | |
| GATTGCCATATTGATCAACT+TGG | - | chr6_2:72757809-72757828 | None:intergenic | 35.0% | |
| TTTATATCTAATGCAGGTGG+TGG | + | chr6_2:72758169-72758188 | Msa0928010:intron | 35.0% | |
| GGTAATGATATTGATGGAAC+CGG | + | chr6_2:72758199-72758218 | Msa0928010:intron | 35.0% | |
| GTAATGATATTGATGGAACC+GGG | + | chr6_2:72758200-72758219 | Msa0928010:CDS | 35.0% | |
| CAACAACATGGAGAAAATAG+AGG | + | chr6_2:72758415-72758434 | Msa0928010:intron | 35.0% | |
| CAACAACATGGAGATAATAG+AGG | + | chr6_2:72758604-72758623 | Msa0928010:CDS | 35.0% | |
| AAGATTAAGGAGAAGATTCC+TGG | + | chr6_2:72758637-72758656 | Msa0928010:CDS | 35.0% | |
| AATATTTATGGGACAGGAAC+TGG | + | chr6_2:72758670-72758689 | Msa0928010:CDS | 35.0% | |
| AACACCTTGGTGAGAAAAAA+GGG | + | chr6_2:72758803-72758822 | Msa0928010:CDS | 35.0% | |
| !!! | TAATCCCTTTTTTCTCACCA+AGG | - | chr6_2:72758810-72758829 | None:intergenic | 35.0% |
| TGGTGAGAAAAAAGGGATTA+TGG | + | chr6_2:72758810-72758829 | Msa0928010:CDS | 35.0% | |
| GCATCCATATACACACATTA+TGG | - | chr6_2:72758895-72758914 | None:intergenic | 35.0% | |
| TCACCTCATGTATCTATATG+AGG | + | chr6_2:72759034-72759053 | Msa0928010:three_prime_UTR | 35.0% | |
| ACACCTCATATAGATACATG+AGG | - | chr6_2:72759040-72759059 | None:intergenic | 35.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | + | chr6_2:72757765-72757784 | Msa0928010:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | - | chr6_2:72757803-72757822 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | + | chr6_2:72757801-72757820 | Msa0928010:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | + | chr6_2:72757816-72757835 | Msa0928010:CDS | 40.0% | |
| CAACTCCATGATGTTGTTGA+TGG | - | chr6_2:72757875-72757894 | None:intergenic | 40.0% | |
| ! | ATGGAGTTGACACAGGTTTT+GGG | + | chr6_2:72757886-72757905 | Msa0928010:intron | 40.0% |
| ! | TTTTGTGTCTGACTGAAGCA+TGG | + | chr6_2:72758039-72758058 | Msa0928010:intron | 40.0% |
| GAACTGGACATGATAACAGA+GGG | + | chr6_2:72758275-72758294 | Msa0928010:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | + | chr6_2:72758276-72758295 | Msa0928010:CDS | 40.0% | |
| ACAACTGGTTATGGTGATAC+TGG | + | chr6_2:72758361-72758380 | Msa0928010:intron | 40.0% | |
| TGGAGAAAATAGAGGAGTTG+TGG | + | chr6_2:72758423-72758442 | Msa0928010:intron | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | + | chr6_2:72758448-72758467 | Msa0928010:CDS | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | + | chr6_2:72758759-72758778 | Msa0928010:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | + | chr6_2:72758760-72758779 | Msa0928010:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | + | chr6_2:72758769-72758788 | Msa0928010:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | + | chr6_2:72758802-72758821 | Msa0928010:CDS | 40.0% | |
| !! | ACTGGTAGGGTTGATGAATA+TGG | + | chr6_2:72757765-72757784 | Msa0928010:CDS | 40.0% |
| CATATTGATCAACTTGGCCT+TGG | - | chr6_2:72757803-72757822 | None:intergenic | 40.0% | |
| !! | CAAGGCCAAGTTGATCAATA+TGG | + | chr6_2:72757801-72757820 | Msa0928010:CDS | 40.0% |
| CAATATGGCAATCCCATTAG+TGG | + | chr6_2:72757816-72757835 | Msa0928010:CDS | 40.0% | |
| CAACTCCATGATGTTGTTGA+TGG | - | chr6_2:72757875-72757894 | None:intergenic | 40.0% | |
| ! | ATGGAGTTGACACAGGTTTT+GGG | + | chr6_2:72757886-72757905 | Msa0928010:intron | 40.0% |
| ! | TTTTGTGTCTGACTGAAGCA+TGG | + | chr6_2:72758039-72758058 | Msa0928010:intron | 40.0% |
| GAACTGGACATGATAACAGA+GGG | + | chr6_2:72758275-72758294 | Msa0928010:CDS | 40.0% | |
| AACTGGACATGATAACAGAG+GGG | + | chr6_2:72758276-72758295 | Msa0928010:CDS | 40.0% | |
| ACAACTGGTTATGGTGATAC+TGG | + | chr6_2:72758361-72758380 | Msa0928010:intron | 40.0% | |
| TGGAGAAAATAGAGGAGTTG+TGG | + | chr6_2:72758423-72758442 | Msa0928010:intron | 40.0% | |
| AAGATCAAGGAGAAGATTCC+TGG | + | chr6_2:72758448-72758467 | Msa0928010:CDS | 40.0% | |
| ! | TGGACAAGAGTATGGAAAAG+AGG | + | chr6_2:72758759-72758778 | Msa0928010:CDS | 40.0% |
| ! | GGACAAGAGTATGGAAAAGA+GGG | + | chr6_2:72758760-72758779 | Msa0928010:CDS | 40.0% |
| TATGGAAAAGAGGGTCATCA+TGG | + | chr6_2:72758769-72758788 | Msa0928010:CDS | 40.0% | |
| CAACACCTTGGTGAGAAAAA+AGG | + | chr6_2:72758802-72758821 | Msa0928010:CDS | 40.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | + | chr6_2:72757747-72757766 | Msa0928010:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | + | chr6_2:72757751-72757770 | Msa0928010:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | + | chr6_2:72757752-72757771 | Msa0928010:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | + | chr6_2:72757819-72757838 | Msa0928010:intron | 45.0% | |
| GGACACCATCAACAACATCA+TGG | + | chr6_2:72757867-72757886 | Msa0928010:intron | 45.0% | |
| CAACATCATGGAGTTGACAC+AGG | + | chr6_2:72757879-72757898 | Msa0928010:intron | 45.0% | |
| ! | CATGGAGTTGACACAGGTTT+TGG | + | chr6_2:72757885-72757904 | Msa0928010:intron | 45.0% |
| ! | TCTAATGCAGGTGGTGGTTA+TGG | + | chr6_2:72758175-72758194 | Msa0928010:intron | 45.0% |
| GATATTGATGGAACCGGGTA+TGG | + | chr6_2:72758205-72758224 | Msa0928010:CDS | 45.0% | |
| GGAACTGGACATGATAACAG+AGG | + | chr6_2:72758274-72758293 | Msa0928010:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | + | chr6_2:72758282-72758301 | Msa0928010:CDS | 45.0% | |
| !! | AGGGGTAGTGGACAAGATTA+AGG | + | chr6_2:72758294-72758313 | Msa0928010:CDS | 45.0% |
| AAGGAGAAAATTCCTGGCAC+TGG | + | chr6_2:72758313-72758332 | Msa0928010:CDS | 45.0% | |
| ! | AAAATTCCTGGCACTGGAAC+TGG | + | chr6_2:72758319-72758338 | Msa0928010:CDS | 45.0% |
| GGTTATGGTGATACTGGTGT+TGG | + | chr6_2:72758367-72758386 | Msa0928010:intron | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_2:72758403-72758422 | Msa0928010:intron | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | + | chr6_2:72758435-72758454 | Msa0928010:intron | 45.0% | |
| AAGGAGAAGATTCCTGGAAC+TGG | + | chr6_2:72758454-72758473 | Msa0928010:CDS | 45.0% | |
| AAGATTCCTGGAACTGGAAC+TGG | + | chr6_2:72758460-72758479 | Msa0928010:CDS | 45.0% | |
| GGTCATGGAACAACTGGTTA+TGG | + | chr6_2:72758493-72758512 | Msa0928010:intron | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | + | chr6_2:72758502-72758521 | Msa0928010:intron | 45.0% |
| GGTCATGGAACAACTGGTTA+TGG | + | chr6_2:72758493-72758512 | Msa0928010:intron | 45.0% | |
| !! | GGTTATGGTGCTACTGATGT+TGG | + | chr6_2:72758556-72758575 | Msa0928010:CDS | 45.0% |
| GATGTTGGTCATGGAACAAC+TGG | + | chr6_2:72758571-72758590 | Msa0928010:CDS | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_2:72758403-72758422 | Msa0928010:intron | 45.0% |
| TGGAGATAATAGAGGAGCTG+TGG | + | chr6_2:72758612-72758631 | Msa0928010:CDS | 45.0% | |
| AGGAGCTGTGGACAAGATTA+AGG | + | chr6_2:72758624-72758643 | Msa0928010:CDS | 45.0% | |
| CATGGACATGGAACAACTAC+TGG | + | chr6_2:72758724-72758743 | Msa0928010:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | + | chr6_2:72758730-72758749 | Msa0928010:CDS | 45.0% |
| AAGGAGAAGATTCCTGGTAC+TGG | + | chr6_2:72758643-72758662 | Msa0928010:CDS | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | + | chr6_2:72758859-72758878 | Msa0928010:CDS | 45.0% | |
| CAACAAGGTGGTGATCAAAC+TGG | + | chr6_2:72757747-72757766 | Msa0928010:CDS | 45.0% | |
| AAGGTGGTGATCAAACTGGT+AGG | + | chr6_2:72757751-72757770 | Msa0928010:CDS | 45.0% | |
| AGGTGGTGATCAAACTGGTA+GGG | + | chr6_2:72757752-72757771 | Msa0928010:CDS | 45.0% | |
| TATGGCAATCCCATTAGTGG+TGG | + | chr6_2:72757819-72757838 | Msa0928010:intron | 45.0% | |
| GGACACCATCAACAACATCA+TGG | + | chr6_2:72757867-72757886 | Msa0928010:intron | 45.0% | |
| CAACATCATGGAGTTGACAC+AGG | + | chr6_2:72757879-72757898 | Msa0928010:intron | 45.0% | |
| ! | CATGGAGTTGACACAGGTTT+TGG | + | chr6_2:72757885-72757904 | Msa0928010:intron | 45.0% |
| ! | TCTAATGCAGGTGGTGGTTA+TGG | + | chr6_2:72758175-72758194 | Msa0928010:intron | 45.0% |
| GATATTGATGGAACCGGGTA+TGG | + | chr6_2:72758205-72758224 | Msa0928010:CDS | 45.0% | |
| GGAACTGGACATGATAACAG+AGG | + | chr6_2:72758274-72758293 | Msa0928010:CDS | 45.0% | |
| ACATGATAACAGAGGGGTAG+TGG | + | chr6_2:72758282-72758301 | Msa0928010:CDS | 45.0% | |
| !! | AGGGGTAGTGGACAAGATTA+AGG | + | chr6_2:72758294-72758313 | Msa0928010:CDS | 45.0% |
| AAGGAGAAAATTCCTGGCAC+TGG | + | chr6_2:72758313-72758332 | Msa0928010:CDS | 45.0% | |
| ! | AAAATTCCTGGCACTGGAAC+TGG | + | chr6_2:72758319-72758338 | Msa0928010:CDS | 45.0% |
| GGTTATGGTGATACTGGTGT+TGG | + | chr6_2:72758367-72758386 | Msa0928010:intron | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_2:72758403-72758422 | Msa0928010:intron | 45.0% |
| AGGAGTTGTGGACAAGATCA+AGG | + | chr6_2:72758435-72758454 | Msa0928010:intron | 45.0% | |
| AAGGAGAAGATTCCTGGAAC+TGG | + | chr6_2:72758454-72758473 | Msa0928010:CDS | 45.0% | |
| AAGATTCCTGGAACTGGAAC+TGG | + | chr6_2:72758460-72758479 | Msa0928010:CDS | 45.0% | |
| GGTCATGGAACAACTGGTTA+TGG | + | chr6_2:72758493-72758512 | Msa0928010:intron | 45.0% | |
| !! | ACAACTGGTTATGGTGCTAC+TGG | + | chr6_2:72758502-72758521 | Msa0928010:intron | 45.0% |
| GGTCATGGAACAACTGGTTA+TGG | + | chr6_2:72758493-72758512 | Msa0928010:intron | 45.0% | |
| !! | GGTTATGGTGCTACTGATGT+TGG | + | chr6_2:72758556-72758575 | Msa0928010:CDS | 45.0% |
| GATGTTGGTCATGGAACAAC+TGG | + | chr6_2:72758571-72758590 | Msa0928010:CDS | 45.0% | |
| !! | GGTGTTGGTCATCAACAACA+TGG | + | chr6_2:72758403-72758422 | Msa0928010:intron | 45.0% |
| TGGAGATAATAGAGGAGCTG+TGG | + | chr6_2:72758612-72758631 | Msa0928010:CDS | 45.0% | |
| AGGAGCTGTGGACAAGATTA+AGG | + | chr6_2:72758624-72758643 | Msa0928010:CDS | 45.0% | |
| CATGGACATGGAACAACTAC+TGG | + | chr6_2:72758724-72758743 | Msa0928010:CDS | 45.0% | |
| ! | CATGGAACAACTACTGGCTA+TGG | + | chr6_2:72758730-72758749 | Msa0928010:CDS | 45.0% |
| AAGGAGAAGATTCCTGGTAC+TGG | + | chr6_2:72758643-72758662 | Msa0928010:CDS | 45.0% | |
| ACTGGATCATGTACTGGACA+TGG | + | chr6_2:72758859-72758878 | Msa0928010:CDS | 45.0% | |
| TATGGAAACCCCTTGAGCCA+AGG | + | chr6_2:72757783-72757802 | Msa0928010:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | - | chr6_2:72757795-72757814 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | - | chr6_2:72757796-72757815 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | + | chr6_2:72757823-72757842 | Msa0928010:intron | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | - | chr6_2:72757831-72757850 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | - | chr6_2:72757832-72757851 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | + | chr6_2:72757831-72757850 | Msa0928010:intron | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | + | chr6_2:72757846-72757865 | Msa0928010:intron | 50.0% |
| !!! | ACAGGTTTTGGGAGCAACAC+AGG | + | chr6_2:72757897-72757916 | Msa0928010:intron | 50.0% |
| TTTGGGAGCAACACAGGTAC+TGG | + | chr6_2:72757903-72757922 | Msa0928010:intron | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | + | chr6_2:72757909-72757928 | Msa0928010:intron | 50.0% |
| ACAGGATATGCAACACACGC+TGG | + | chr6_2:72757927-72757946 | Msa0928010:intron | 50.0% | |
| TATGCAACACACGCTGGTAG+TGG | + | chr6_2:72757933-72757952 | Msa0928010:intron | 50.0% | |
| ATGCAACACACGCTGGTAGT+GGG | + | chr6_2:72757934-72757953 | Msa0928010:intron | 50.0% | |
| ! | AATGCAGGTGGTGGTTATGG+AGG | + | chr6_2:72758178-72758197 | Msa0928010:intron | 50.0% |
| ATGGAACCGGGTATGGTACA+GGG | + | chr6_2:72758212-72758231 | Msa0928010:CDS | 50.0% | |
| TATGGTACAGGGACAGGAAC+CGG | + | chr6_2:72758223-72758242 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| GGTCGTGGAACAACTGGTTA+TGG | + | chr6_2:72758352-72758371 | Msa0928010:CDS | 50.0% | |
| !! | GGTGATACTGGTGTTGGTCA+AGG | + | chr6_2:72758373-72758392 | Msa0928010:intron | 50.0% |
| !! | GGTGTTGGTCAAGGAACAAC+TGG | + | chr6_2:72758382-72758401 | Msa0928010:intron | 50.0% |
| GGTCAAGGAACAACTGGTGT+TGG | + | chr6_2:72758388-72758407 | Msa0928010:intron | 50.0% | |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACAGGTCA+TGG | + | chr6_2:72758478-72758497 | Msa0928010:intron | 50.0% | |
| GGAACAGGTCATGGAACAAC+TGG | + | chr6_2:72758487-72758506 | Msa0928010:intron | 50.0% | |
| !! | GGTTATGGTGCTACTGGAAC+TGG | + | chr6_2:72758508-72758527 | Msa0928010:intron | 50.0% |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACAGGTCA+TGG | + | chr6_2:72758478-72758497 | Msa0928010:intron | 50.0% | |
| GGAACAGGTCATGGAACAAC+TGG | + | chr6_2:72758487-72758506 | Msa0928010:intron | 50.0% | |
| !! | GGTGCTACTGATGTTGGTCA+TGG | + | chr6_2:72758562-72758581 | Msa0928010:CDS | 50.0% |
| GGTCATGGAACAACTGGTGT+TGG | + | chr6_2:72758577-72758596 | Msa0928010:CDS | 50.0% | |
| TATGGGACAGGAACTGGAAC+TGG | + | chr6_2:72758676-72758695 | Msa0928010:CDS | 50.0% | |
| ACAGGAACTGGAACTGGACA+TGG | + | chr6_2:72758682-72758701 | Msa0928010:CDS | 50.0% | |
| CAGGAACTGGAACTGGACAT+GGG | + | chr6_2:72758683-72758702 | Msa0928010:CDS | 50.0% | |
| ACAGGAACAGGAACTGGACA+TGG | + | chr6_2:72758706-72758725 | Msa0928010:CDS | 50.0% | |
| ACAGGAACTGGACATGGACA+TGG | + | chr6_2:72758712-72758731 | Msa0928010:CDS | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | + | chr6_2:72758739-72758758 | Msa0928010:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | + | chr6_2:72758751-72758770 | Msa0928010:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | + | chr6_2:72758790-72758809 | Msa0928010:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+AGG | - | chr6_2:72758856-72758875 | None:intergenic | 50.0% | |
| ! | CCTGGTACTGGATCATGTAC+TGG | + | chr6_2:72758853-72758872 | Msa0928010:CDS | 50.0% |
| TATGGAAACCCCTTGAGCCA+AGG | + | chr6_2:72757783-72757802 | Msa0928010:CDS | 50.0% | |
| !! | TCAACTTGGCCTTGGCTCAA+GGG | - | chr6_2:72757795-72757814 | None:intergenic | 50.0% |
| !! | ATCAACTTGGCCTTGGCTCA+AGG | - | chr6_2:72757796-72757815 | None:intergenic | 50.0% |
| GCAATCCCATTAGTGGTGGT+GGG | + | chr6_2:72757823-72757842 | Msa0928010:intron | 50.0% | |
| GTCATCCCACCACCACTAAT+GGG | - | chr6_2:72757831-72757850 | None:intergenic | 50.0% | |
| AGTCATCCCACCACCACTAA+TGG | - | chr6_2:72757832-72757851 | None:intergenic | 50.0% | |
| !! | ATTAGTGGTGGTGGGATGAC+TGG | + | chr6_2:72757831-72757850 | Msa0928010:intron | 50.0% |
| !! | ATGACTGGTGCTACTGGTCA+TGG | + | chr6_2:72757846-72757865 | Msa0928010:intron | 50.0% |
| !!! | ACAGGTTTTGGGAGCAACAC+AGG | + | chr6_2:72757897-72757916 | Msa0928010:intron | 50.0% |
| TTTGGGAGCAACACAGGTAC+TGG | + | chr6_2:72757903-72757922 | Msa0928010:intron | 50.0% | |
| !! | AGCAACACAGGTACTGGTAC+AGG | + | chr6_2:72757909-72757928 | Msa0928010:intron | 50.0% |
| ACAGGATATGCAACACACGC+TGG | + | chr6_2:72757927-72757946 | Msa0928010:intron | 50.0% | |
| TATGCAACACACGCTGGTAG+TGG | + | chr6_2:72757933-72757952 | Msa0928010:intron | 50.0% | |
| ATGCAACACACGCTGGTAGT+GGG | + | chr6_2:72757934-72757953 | Msa0928010:intron | 50.0% | |
| ! | AATGCAGGTGGTGGTTATGG+AGG | + | chr6_2:72758178-72758197 | Msa0928010:intron | 50.0% |
| ATGGAACCGGGTATGGTACA+GGG | + | chr6_2:72758212-72758231 | Msa0928010:CDS | 50.0% | |
| TATGGTACAGGGACAGGAAC+CGG | + | chr6_2:72758223-72758242 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| GGTCGTGGAACAACTGGTTA+TGG | + | chr6_2:72758352-72758371 | Msa0928010:CDS | 50.0% | |
| !! | GGTGATACTGGTGTTGGTCA+AGG | + | chr6_2:72758373-72758392 | Msa0928010:intron | 50.0% |
| !! | GGTGTTGGTCAAGGAACAAC+TGG | + | chr6_2:72758382-72758401 | Msa0928010:intron | 50.0% |
| GGTCAAGGAACAACTGGTGT+TGG | + | chr6_2:72758388-72758407 | Msa0928010:intron | 50.0% | |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACAGGTCA+TGG | + | chr6_2:72758478-72758497 | Msa0928010:intron | 50.0% | |
| GGAACAGGTCATGGAACAAC+TGG | + | chr6_2:72758487-72758506 | Msa0928010:intron | 50.0% | |
| !! | GGTTATGGTGCTACTGGAAC+TGG | + | chr6_2:72758508-72758527 | Msa0928010:intron | 50.0% |
| ACTGGAACTGGAACTGGAAC+AGG | + | chr6_2:72758331-72758350 | Msa0928010:CDS | 50.0% | |
| ACTGGAACTGGAACAGGTCA+TGG | + | chr6_2:72758478-72758497 | Msa0928010:intron | 50.0% | |
| GGAACAGGTCATGGAACAAC+TGG | + | chr6_2:72758487-72758506 | Msa0928010:intron | 50.0% | |
| !! | GGTGCTACTGATGTTGGTCA+TGG | + | chr6_2:72758562-72758581 | Msa0928010:CDS | 50.0% |
| GGTCATGGAACAACTGGTGT+TGG | + | chr6_2:72758577-72758596 | Msa0928010:CDS | 50.0% | |
| TATGGGACAGGAACTGGAAC+TGG | + | chr6_2:72758676-72758695 | Msa0928010:CDS | 50.0% | |
| ACAGGAACTGGAACTGGACA+TGG | + | chr6_2:72758682-72758701 | Msa0928010:CDS | 50.0% | |
| CAGGAACTGGAACTGGACAT+GGG | + | chr6_2:72758683-72758702 | Msa0928010:CDS | 50.0% | |
| ACAGGAACAGGAACTGGACA+TGG | + | chr6_2:72758706-72758725 | Msa0928010:CDS | 50.0% | |
| ACAGGAACTGGACATGGACA+TGG | + | chr6_2:72758712-72758731 | Msa0928010:CDS | 50.0% | |
| ! | ACTACTGGCTATGGAAGCAC+TGG | + | chr6_2:72758739-72758758 | Msa0928010:CDS | 50.0% |
| !! | GGAAGCACTGGACAAGAGTA+TGG | + | chr6_2:72758751-72758770 | Msa0928010:CDS | 50.0% |
| GGACATGATGAGCAACACCT+TGG | + | chr6_2:72758790-72758809 | Msa0928010:CDS | 50.0% | |
| CCAGTACATGATCCAGTACC+AGG | - | chr6_2:72758856-72758875 | None:intergenic | 50.0% | |
| ! | CCTGGTACTGGATCATGTAC+TGG | + | chr6_2:72758853-72758872 | Msa0928010:CDS | 50.0% |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | - | chr6_2:72757794-72757813 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | + | chr6_2:72757822-72757841 | Msa0928010:intron | 55.0% | |
| ! | TGCAACACACGCTGGTAGTG+GGG | + | chr6_2:72757935-72757954 | Msa0928010:intron | 55.0% |
| GATGGAACCGGGTATGGTAC+AGG | + | chr6_2:72758211-72758230 | Msa0928010:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | - | chr6_2:72758221-72758240 | None:intergenic | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | - | chr6_2:72758245-72758264 | None:intergenic | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | + | chr6_2:72758247-72758266 | Msa0928010:CDS | 55.0% | |
| ACTGGAACTGGAACAGGTCG+TGG | + | chr6_2:72758337-72758356 | Msa0928010:CDS | 55.0% | |
| GGAACAGGTCGTGGAACAAC+TGG | + | chr6_2:72758346-72758365 | Msa0928010:CDS | 55.0% | |
| CCAGTTCCAGTTCCAGTTCC+AGG | - | chr6_2:72758469-72758488 | None:intergenic | 55.0% | |
| CCTGGAACTGGAACTGGAAC+TGG | + | chr6_2:72758466-72758485 | Msa0928010:CDS | 55.0% | |
| !! | GGTGCTACTGGAACTGGAAC+TGG | + | chr6_2:72758514-72758533 | Msa0928010:intron | 55.0% |
| ACTGGAACTGGACATGGGAC+AGG | + | chr6_2:72758688-72758707 | Msa0928010:CDS | 55.0% | |
| ACTGGACATGGGACAGGAAC+AGG | + | chr6_2:72758694-72758713 | Msa0928010:CDS | 55.0% | |
| CATGGGACAGGAACAGGAAC+TGG | + | chr6_2:72758700-72758719 | Msa0928010:CDS | 55.0% | |
| !! | CAACTTGGCCTTGGCTCAAG+GGG | - | chr6_2:72757794-72757813 | None:intergenic | 55.0% |
| GGCAATCCCATTAGTGGTGG+TGG | + | chr6_2:72757822-72757841 | Msa0928010:intron | 55.0% | |
| ! | TGCAACACACGCTGGTAGTG+GGG | + | chr6_2:72757935-72757954 | Msa0928010:intron | 55.0% |
| GATGGAACCGGGTATGGTAC+AGG | + | chr6_2:72758211-72758230 | Msa0928010:CDS | 55.0% | |
| TCCTGTCCCTGTACCATACC+CGG | - | chr6_2:72758221-72758240 | None:intergenic | 55.0% | |
| AGCTCCATAGCCGGTTGTTC+CGG | - | chr6_2:72758245-72758264 | None:intergenic | 55.0% | |
| ACAACCGGCTATGGAGCTAC+AGG | + | chr6_2:72758247-72758266 | Msa0928010:CDS | 55.0% | |
| ACTGGAACTGGAACAGGTCG+TGG | + | chr6_2:72758337-72758356 | Msa0928010:CDS | 55.0% | |
| GGAACAGGTCGTGGAACAAC+TGG | + | chr6_2:72758346-72758365 | Msa0928010:CDS | 55.0% | |
| CCAGTTCCAGTTCCAGTTCC+AGG | - | chr6_2:72758469-72758488 | None:intergenic | 55.0% | |
| CCTGGAACTGGAACTGGAAC+TGG | + | chr6_2:72758466-72758485 | Msa0928010:CDS | 55.0% | |
| !! | GGTGCTACTGGAACTGGAAC+TGG | + | chr6_2:72758514-72758533 | Msa0928010:intron | 55.0% |
| ACTGGAACTGGACATGGGAC+AGG | + | chr6_2:72758688-72758707 | Msa0928010:CDS | 55.0% | |
| ACTGGACATGGGACAGGAAC+AGG | + | chr6_2:72758694-72758713 | Msa0928010:CDS | 55.0% | |
| CATGGGACAGGAACAGGAAC+TGG | + | chr6_2:72758700-72758719 | Msa0928010:CDS | 55.0% | |
| !! | GGTGGGATGACTGGTGCTAC+TGG | + | chr6_2:72757840-72757859 | Msa0928010:intron | 60.0% |
| !! | GCAACACACGCTGGTAGTGG+GGG | + | chr6_2:72757936-72757955 | Msa0928010:intron | 60.0% |
| !! | CAACACACGCTGGTAGTGGG+GGG | + | chr6_2:72757937-72757956 | Msa0928010:intron | 60.0% |
| !! | AACACACGCTGGTAGTGGGG+GGG | + | chr6_2:72757938-72757957 | Msa0928010:intron | 60.0% |
| ACCGGGTATGGTACAGGGAC+AGG | + | chr6_2:72758217-72758236 | Msa0928010:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | + | chr6_2:72758232-72758251 | Msa0928010:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | + | chr6_2:72758238-72758257 | Msa0928010:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | + | chr6_2:72758250-72758269 | Msa0928010:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | - | chr6_2:72758254-72758273 | None:intergenic | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | + | chr6_2:72758253-72758272 | Msa0928010:CDS | 60.0% | |
| CCAGTTCCAGTTCCAGTGCC+AGG | - | chr6_2:72758328-72758347 | None:intergenic | 60.0% | |
| ! | CCTGGCACTGGAACTGGAAC+TGG | + | chr6_2:72758325-72758344 | Msa0928010:CDS | 60.0% |
| !! | GGTGGGATGACTGGTGCTAC+TGG | + | chr6_2:72757840-72757859 | Msa0928010:intron | 60.0% |
| !! | GCAACACACGCTGGTAGTGG+GGG | + | chr6_2:72757936-72757955 | Msa0928010:intron | 60.0% |
| !! | CAACACACGCTGGTAGTGGG+GGG | + | chr6_2:72757937-72757956 | Msa0928010:intron | 60.0% |
| !! | AACACACGCTGGTAGTGGGG+GGG | + | chr6_2:72757938-72757957 | Msa0928010:intron | 60.0% |
| ACCGGGTATGGTACAGGGAC+AGG | + | chr6_2:72758217-72758236 | Msa0928010:CDS | 60.0% | |
| GGGACAGGAACCGGAACAAC+CGG | + | chr6_2:72758232-72758251 | Msa0928010:CDS | 60.0% | |
| GGAACCGGAACAACCGGCTA+TGG | + | chr6_2:72758238-72758257 | Msa0928010:CDS | 60.0% | |
| ACCGGCTATGGAGCTACAGG+TGG | + | chr6_2:72758250-72758269 | Msa0928010:CDS | 60.0% | |
| GCCACCTGTAGCTCCATAGC+CGG | - | chr6_2:72758254-72758273 | None:intergenic | 60.0% | |
| GGCTATGGAGCTACAGGTGG+CGG | + | chr6_2:72758253-72758272 | Msa0928010:CDS | 60.0% | |
| CCAGTTCCAGTTCCAGTGCC+AGG | - | chr6_2:72758328-72758347 | None:intergenic | 60.0% | |
| ! | CCTGGCACTGGAACTGGAAC+TGG | + | chr6_2:72758325-72758344 | Msa0928010:CDS | 60.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | + | chr6_2:72758259-72758278 | Msa0928010:CDS | 65.0% |
| !! | GGAGCTACAGGTGGCGGAAC+TGG | + | chr6_2:72758259-72758278 | Msa0928010:CDS | 65.0% |
| !! | GGTAGTGGGGGGGCTCCCAC+AGG | + | chr6_2:72757948-72757967 | Msa0928010:intron | 75.0% |
| !! | GGTAGTGGGGGGGCTCCCAC+AGG | + | chr6_2:72757948-72757967 | Msa0928010:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 72757665 | 72759102 | 72757665 | ID=Msa0928010;Name=Msa0928010 |
| chr6_2 | mRNA | 72757665 | 72759102 | 72757665 | ID=Msa0928010-mRNA-1;Parent=Msa0928010;Name=Msa0928010-mRNA-1;_AED=0.11;_eAED=0.11;_QI=70|0.75|0.8|1|0|0|5|182|229 |
| chr6_2 | exon | 72757665 | 72757837 | 72757665 | ID=Msa0928010-mRNA-1:exon:12334;Parent=Msa0928010-mRNA-1 |
| chr6_2 | exon | 72758200 | 72758373 | 72758200 | ID=Msa0928010-mRNA-1:exon:12335;Parent=Msa0928010-mRNA-1 |
| chr6_2 | exon | 72758437 | 72758493 | 72758437 | ID=Msa0928010-mRNA-1:exon:12336;Parent=Msa0928010-mRNA-1 |
| chr6_2 | exon | 72758542 | 72758900 | 72758542 | ID=Msa0928010-mRNA-1:exon:12337;Parent=Msa0928010-mRNA-1 |
| chr6_2 | exon | 72758924 | 72759102 | 72758924 | ID=Msa0928010-mRNA-1:exon:12338;Parent=Msa0928010-mRNA-1 |
| chr6_2 | five_prime_UTR | 72757665 | 72757734 | 72757665 | ID=Msa0928010-mRNA-1:five_prime_utr;Parent=Msa0928010-mRNA-1 |
| chr6_2 | CDS | 72757735 | 72757837 | 72757735 | ID=Msa0928010-mRNA-1:cds;Parent=Msa0928010-mRNA-1 |
| chr6_2 | CDS | 72758200 | 72758373 | 72758200 | ID=Msa0928010-mRNA-1:cds;Parent=Msa0928010-mRNA-1 |
| chr6_2 | CDS | 72758437 | 72758493 | 72758437 | ID=Msa0928010-mRNA-1:cds;Parent=Msa0928010-mRNA-1 |
| chr6_2 | CDS | 72758542 | 72758897 | 72758542 | ID=Msa0928010-mRNA-1:cds;Parent=Msa0928010-mRNA-1 |
| chr6_2 | three_prime_UTR | 72758898 | 72758900 | 72758898 | ID=Msa0928010-mRNA-1:three_prime_utr;Parent=Msa0928010-mRNA-1 |
| chr6_2 | three_prime_UTR | 72758924 | 72759102 | 72758924 | ID=Msa0928010-mRNA-1:three_prime_utr;Parent=Msa0928010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
