AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0964880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964880 MtrunA17_Chr6g0485471 95.954 692 12 1 1 692 1 676 0.0 1363
Msa0964880 MtrunA17_Chr2g0331761 58.333 744 191 13 5 690 15 697 0.0 792
Msa0964880 MtrunA17_Chr4g0067421 52.422 702 246 18 54 688 127 807 0.0 650
Msa0964880 MtrunA17_Chr2g0295881 53.780 582 202 17 54 594 120 675 0.0 567
Msa0964880 MtrunA17_Chr2g0295881 50.549 91 45 0 598 688 782 872 7.50e-23 104
Msa0964880 MtrunA17_Chr2g0307481 38.187 364 200 7 117 459 42 401 1.56e-59 211
Msa0964880 MtrunA17_Chr6g0475171 93.939 99 6 0 72 170 1 99 3.84e-59 194
Msa0964880 MtrunA17_Chr4g0062291 39.359 343 180 8 130 454 122 454 9.97e-58 207
Msa0964880 MtrunA17_Chr2g0327581 32.719 434 243 11 96 497 12 428 1.37e-50 190
Msa0964880 MtrunA17_Chr3g0132921 32.275 378 204 9 124 467 2 361 3.70e-49 180
Msa0964880 MtrunA17_Chr3g0134191 33.418 392 205 9 132 479 9 388 7.74e-49 185
Msa0964880 MtrunA17_Chr5g0427481 32.727 385 198 10 126 471 12 374 1.11e-48 185
Msa0964880 MtrunA17_Chr1g0178411 32.530 415 229 12 116 497 1 397 1.03e-46 178
Msa0964880 MtrunA17_Chr1g0153061 33.756 394 201 9 132 479 9 388 2.45e-46 177
Msa0964880 MtrunA17_Chr7g0266631 32.266 406 228 10 123 497 4 393 1.48e-45 175
Msa0964880 MtrunA17_Chr4g0053211 31.948 385 200 8 132 467 13 384 1.51e-45 175
Msa0964880 MtrunA17_Chr5g0407791 36.418 335 191 9 130 454 888 1210 2.50e-45 174
Msa0964880 MtrunA17_Chr1g0182151 34.060 367 191 10 122 454 48 397 4.47e-45 173
Msa0964880 MtrunA17_Chr7g0272871 35.088 342 191 11 132 457 128 454 4.85e-45 172
Msa0964880 MtrunA17_Chr5g0405181 36.070 341 193 9 127 454 16 344 5.84e-45 173
Msa0964880 MtrunA17_Chr1g0191851 34.218 339 198 8 132 457 148 474 1.50e-44 171
Msa0964880 MtrunA17_Chr3g0142261 34.412 340 193 9 131 455 19 343 1.75e-44 172
Msa0964880 MtrunA17_Chr8g0372171 35.905 337 193 8 131 455 19 344 3.34e-44 171
Msa0964880 MtrunA17_Chr6g0483701 34.347 329 207 5 131 455 30 353 2.50e-42 165
Msa0964880 MtrunA17_Chr7g0238581 33.148 359 205 13 118 455 8 352 8.73e-42 161
Msa0964880 MtrunA17_Chr4g0070001 36.667 330 192 8 131 454 143 461 1.12e-41 163
Msa0964880 MtrunA17_Chr8g0369881 33.628 339 195 9 130 454 874 1196 3.25e-41 162
Msa0964880 MtrunA17_Chr4g0036001 34.694 343 205 8 124 455 13 347 6.95e-40 157
Msa0964880 MtrunA17_Chr3g0145071 34.911 338 196 9 124 452 92 414 8.20e-40 157
Msa0964880 MtrunA17_Chr4g0045381 32.857 350 191 9 132 452 194 528 1.31e-39 157
Msa0964880 MtrunA17_Chr4g0035661 34.545 330 192 9 132 452 90 404 6.36e-39 155
Msa0964880 MtrunA17_Chr4g0042061 33.708 356 203 8 132 462 433 780 8.68e-39 154
Msa0964880 MtrunA17_Chr2g0312631 32.976 373 209 12 110 457 356 712 9.77e-39 154
Msa0964880 MtrunA17_Chr2g0319271 33.702 362 194 10 132 461 400 747 1.00e-38 153
Msa0964880 MtrunA17_Chr1g0152231 32.853 347 200 10 129 455 1 334 1.91e-38 152
Msa0964880 MtrunA17_Chr8g0377731 31.250 352 196 9 132 454 56 390 3.63e-37 149
Msa0964880 MtrunA17_Chr2g0280421 34.444 360 206 12 132 473 438 785 8.55e-37 147
Msa0964880 MtrunA17_Chr3g0122121 31.117 376 205 12 115 454 79 436 1.29e-36 147
Msa0964880 MtrunA17_Chr4g0049011 34.462 325 180 10 170 466 313 632 1.74e-36 145
Msa0964880 MtrunA17_Chr1g0193221 32.941 340 194 11 129 451 1 323 3.33e-36 146
Msa0964880 MtrunA17_Chr5g0411971 31.751 337 207 8 132 457 400 724 4.04e-36 146
Msa0964880 MtrunA17_Chr4g0069141 35.017 297 165 8 181 452 195 488 4.69e-36 146
Msa0964880 MtrunA17_Chr1g0191181 32.456 342 195 9 178 500 125 449 1.83e-35 142
Msa0964880 MtrunA17_Chr7g0258991 35.135 333 192 9 132 454 74 392 2.17e-35 144
Msa0964880 MtrunA17_Chr2g0322291 30.725 345 205 7 132 452 89 423 3.83e-35 143
Msa0964880 MtrunA17_Chr5g0421521 31.138 334 207 8 132 454 375 696 6.31e-35 142
Msa0964880 MtrunA17_Chr5g0421591 31.138 334 207 8 132 454 375 696 9.02e-35 141
Msa0964880 MtrunA17_Chr5g0398521 32.378 349 202 9 130 451 56 397 1.84e-34 140
Msa0964880 MtrunA17_Chr3g0102921 30.516 426 247 16 132 524 439 848 3.43e-34 140
Msa0964880 MtrunA17_Chr7g0245931 32.597 362 206 9 117 450 39 390 1.51e-33 137
Msa0964880 MtrunA17_Chr1g0192481 31.229 301 180 9 178 459 99 391 2.22e-33 135
Msa0964880 MtrunA17_Chr1g0195111 30.068 296 185 6 178 457 437 726 1.30e-32 135
Msa0964880 MtrunA17_Chr7g0271961 30.612 294 182 7 178 459 445 728 1.49e-32 135
Msa0964880 MtrunA17_Chr5g0447041 27.835 388 202 11 132 457 435 806 1.41e-29 125
Msa0964880 MtrunA17_Chr3g0101021 29.945 364 195 12 126 454 70 408 1.91e-29 125
Msa0964880 MtrunA17_Chr7g0257301 27.957 372 204 9 132 457 393 746 4.92e-29 124
Msa0964880 MtrunA17_Chr5g0445211 28.653 349 205 9 132 452 75 407 2.03e-28 122
Msa0964880 MtrunA17_Chr8g0386891 35.583 163 99 3 296 457 2 159 4.36e-22 99.4
Msa0964880 MtrunA17_Chr1g0187411 28.395 324 164 9 180 457 170 471 6.78e-22 101
Msa0964880 MtrunA17_Chr6g0470541 27.509 269 169 9 193 450 63 316 9.76e-22 100
Msa0964880 MtrunA17_Chr7g0269681 38.514 148 85 3 311 457 54 196 8.03e-21 96.3
Msa0964880 MtrunA17_Chr3g0142841 31.298 262 154 9 183 428 145 396 3.81e-20 95.9
Msa0964880 MtrunA17_Chr6g0484501 36.774 155 92 3 304 457 40 189 6.29e-17 80.9
Msa0964880 MtrunA17_Chr8g0367581 28.378 296 182 11 178 458 186 466 1.94e-16 84.0
Msa0964880 MtrunA17_Chr8g0390991 37.908 153 89 3 306 457 12 159 1.13e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964880 AT3G16060.1 57.453 738 197 12 5 690 9 681 0.0 790
Msa0964880 AT3G16630.2 52.457 692 250 17 54 688 119 788 0.0 641
Msa0964880 AT3G16630.1 52.457 692 250 17 54 688 119 788 0.0 641
Msa0964880 AT1G18550.1 38.235 374 199 10 102 454 119 481 3.19e-59 213
Msa0964880 AT5G60930.3 34.673 398 203 10 132 485 7 391 1.33e-52 197
Msa0964880 AT5G60930.2 34.673 398 203 10 132 485 7 391 1.70e-52 197
Msa0964880 AT5G60930.1 34.673 398 203 10 132 485 7 391 2.65e-52 196
Msa0964880 AT2G28620.3 33.025 433 244 9 122 525 44 459 2.74e-51 192
Msa0964880 AT2G28620.2 33.025 433 244 9 122 525 44 459 2.74e-51 192
Msa0964880 AT3G49650.1 35.072 345 200 9 126 454 9 345 2.99e-51 191
Msa0964880 AT2G28620.1 33.025 433 244 9 122 525 44 459 3.00e-51 192
Msa0964880 AT5G47820.2 35.052 388 192 9 132 471 12 387 5.57e-50 189
Msa0964880 AT5G47820.1 35.052 388 192 9 132 471 12 387 5.57e-50 189
Msa0964880 AT5G27550.2 36.578 339 190 9 132 457 133 459 2.31e-49 185
Msa0964880 AT5G27550.1 36.578 339 190 9 132 457 133 459 2.31e-49 185
Msa0964880 AT3G45850.2 32.921 404 225 10 122 497 49 434 7.66e-49 185
Msa0964880 AT3G45850.1 32.921 404 225 10 122 497 49 434 7.66e-49 185
Msa0964880 AT2G37420.1 32.692 364 210 6 118 454 35 390 1.97e-47 181
Msa0964880 AT2G37420.2 32.692 364 210 6 118 454 35 390 1.97e-47 181
Msa0964880 AT2G36200.1 32.843 408 225 10 122 497 6 396 1.38e-46 178
Msa0964880 AT2G36200.2 32.843 408 225 10 122 497 6 396 1.59e-46 178
Msa0964880 AT3G50240.2 31.842 380 203 8 132 467 26 393 1.70e-45 175
Msa0964880 AT3G50240.1 31.842 380 203 8 132 467 26 393 1.89e-45 175
Msa0964880 AT3G50240.4 31.842 380 203 8 132 467 26 393 2.02e-45 175
Msa0964880 AT5G65930.1 35.224 335 195 8 130 454 886 1208 1.71e-44 172
Msa0964880 AT5G65930.2 35.224 335 195 8 130 454 887 1209 1.82e-44 172
Msa0964880 AT5G65930.3 35.224 335 195 8 130 454 893 1215 1.93e-44 172
Msa0964880 AT1G18370.1 33.739 329 209 5 131 455 31 354 1.93e-42 166
Msa0964880 AT4G24170.1 32.827 329 210 5 131 455 6 327 8.77e-42 164
Msa0964880 AT4G24170.2 32.827 329 210 5 131 455 6 327 8.77e-42 164
Msa0964880 AT2G21300.2 33.939 330 207 7 131 455 24 347 8.38e-41 160
Msa0964880 AT2G21300.4 33.939 330 207 7 131 455 24 347 8.38e-41 160
Msa0964880 AT2G21300.3 33.939 330 207 7 131 455 24 347 8.38e-41 160
Msa0964880 AT2G21300.1 33.939 330 207 7 131 455 24 347 8.38e-41 160
Msa0964880 AT2G21300.5 33.939 330 207 7 131 455 24 347 8.38e-41 160
Msa0964880 AT2G22610.1 33.828 337 200 8 132 457 418 742 1.42e-40 160
Msa0964880 AT2G22610.3 33.828 337 200 8 132 457 419 743 1.80e-40 160
Msa0964880 AT2G22610.2 33.828 337 200 8 132 457 418 742 1.84e-40 160
Msa0964880 AT4G38950.3 35.045 331 202 9 131 455 13 336 2.02e-40 159
Msa0964880 AT4G38950.5 35.045 331 202 9 131 455 13 336 2.02e-40 159
Msa0964880 AT4G38950.4 35.045 331 202 9 131 455 13 336 2.02e-40 159
Msa0964880 AT4G38950.1 35.045 331 202 9 131 455 13 336 2.02e-40 159
Msa0964880 AT4G38950.2 35.045 331 202 9 131 455 13 336 2.02e-40 159
Msa0964880 AT5G66310.2 34.043 329 210 6 131 455 18 343 2.11e-40 159
Msa0964880 AT5G66310.3 34.043 329 210 6 131 455 18 343 2.11e-40 159
Msa0964880 AT5G66310.1 34.043 329 210 6 131 455 18 343 2.11e-40 159
Msa0964880 AT3G51150.1 35.119 336 197 8 131 455 17 342 3.55e-40 159
Msa0964880 AT3G51150.2 35.119 336 197 8 131 455 17 342 3.59e-40 159
Msa0964880 AT3G51150.4 35.119 336 197 8 131 455 17 342 3.59e-40 159
Msa0964880 AT3G51150.3 35.119 336 197 8 131 455 17 342 3.59e-40 159
Msa0964880 AT4G39050.1 36.145 332 188 10 132 454 99 415 1.38e-39 157
Msa0964880 AT4G21270.1 35.112 356 189 11 132 457 432 775 1.49e-39 156
Msa0964880 AT2G21380.2 35.103 339 195 10 132 461 105 427 2.08e-39 156
Msa0964880 AT2G21380.1 35.103 339 195 10 132 461 105 427 2.08e-39 156
Msa0964880 AT4G05190.1 32.542 421 228 15 71 457 374 772 2.26e-39 155
Msa0964880 AT4G05190.2 32.542 421 228 15 71 457 361 759 3.31e-39 155
Msa0964880 AT3G23670.2 33.894 357 180 13 132 454 97 431 3.74e-39 155
Msa0964880 AT3G23670.1 33.894 357 180 13 132 454 97 431 4.57e-39 155
Msa0964880 AT1G72250.1 31.467 375 223 9 110 462 463 825 8.72e-39 155
Msa0964880 AT1G72250.2 31.467 375 223 9 110 462 472 834 9.85e-39 154
Msa0964880 AT1G72250.4 31.467 375 223 9 110 462 483 845 1.10e-38 154
Msa0964880 AT5G27950.1 37.201 293 160 7 180 454 118 404 1.14e-38 152
Msa0964880 AT1G72250.3 31.467 375 223 9 110 462 484 846 1.20e-38 154
Msa0964880 AT4G27180.1 34.366 355 197 11 132 461 388 731 3.32e-38 152
Msa0964880 AT4G27180.2 34.366 355 197 11 132 461 388 731 3.32e-38 152
Msa0964880 AT1G59540.1 33.631 336 200 10 131 455 3 326 7.71e-38 151
Msa0964880 AT5G54670.3 33.708 356 200 11 132 462 337 681 9.81e-38 150
Msa0964880 AT5G06670.8 34.535 333 194 9 132 454 67 385 9.86e-38 150
Msa0964880 AT5G06670.4 34.535 333 194 9 132 454 67 385 9.86e-38 150
Msa0964880 AT5G06670.7 34.535 333 194 9 132 454 67 385 9.86e-38 150
Msa0964880 AT5G54670.1 33.708 356 200 11 132 462 397 741 9.97e-38 150
Msa0964880 AT5G54670.2 33.708 356 200 11 132 462 397 741 9.97e-38 150
Msa0964880 AT5G06670.5 34.535 333 194 9 132 454 67 385 1.28e-37 150
Msa0964880 AT4G14150.1 33.803 355 183 12 132 454 92 426 2.46e-37 150
Msa0964880 AT5G06670.2 34.535 333 194 9 132 454 67 385 2.48e-37 150
Msa0964880 AT5G06670.3 34.535 333 194 9 132 454 67 385 2.48e-37 150
Msa0964880 AT3G12020.4 34.535 333 194 9 132 454 70 388 3.56e-37 149
Msa0964880 AT3G12020.1 34.535 333 194 9 132 454 70 388 3.56e-37 149
Msa0964880 AT1G55550.1 33.333 339 197 10 132 457 92 414 4.11e-37 149
Msa0964880 AT3G12020.3 34.535 333 194 9 132 454 70 388 6.55e-37 149
Msa0964880 AT3G12020.2 34.535 333 194 9 132 454 70 388 6.55e-37 149
Msa0964880 AT3G10180.2 32.743 339 195 9 129 450 1 323 1.74e-36 148
Msa0964880 AT3G10180.1 32.743 339 195 9 129 450 1 323 1.81e-36 147
Msa0964880 AT1G12430.1 34.195 348 192 11 131 450 70 408 1.83e-36 147
Msa0964880 AT5G06670.6 34.211 342 192 10 132 454 67 394 2.09e-36 147
Msa0964880 AT5G06670.1 34.211 342 192 10 132 454 67 394 2.09e-36 147
Msa0964880 AT1G12430.2 33.711 353 187 12 131 450 70 408 2.10e-36 147
Msa0964880 AT3G50240.3 33.103 290 150 6 221 467 3 291 3.14e-36 146
Msa0964880 AT3G19050.1 33.143 350 190 10 132 452 194 528 5.41e-36 147
Msa0964880 AT1G21730.1 33.837 331 195 10 132 452 76 392 7.63e-36 145
Msa0964880 AT3G43210.3 34.441 331 201 7 131 455 29 349 9.77e-36 145
Msa0964880 AT3G43210.5 34.441 331 201 7 131 455 29 349 9.77e-36 145
Msa0964880 AT3G43210.2 34.441 331 201 7 131 455 29 349 9.77e-36 145
Msa0964880 AT3G43210.4 34.441 331 201 7 131 455 29 349 9.77e-36 145
Msa0964880 AT3G43210.1 34.441 331 201 7 131 455 29 349 9.77e-36 145
Msa0964880 AT5G02370.1 30.321 343 210 9 126 455 15 341 1.10e-35 142
Msa0964880 AT3G44050.1 30.025 393 232 10 91 459 61 434 1.67e-35 145
Msa0964880 AT3G44730.2 31.973 294 175 8 181 457 468 753 3.40e-34 140
Msa0964880 AT3G44730.3 31.973 294 175 8 181 457 468 753 3.40e-34 140
Msa0964880 AT3G44730.1 31.973 294 175 8 181 457 423 708 3.96e-34 140
Msa0964880 AT3G44730.4 31.973 294 175 8 181 457 423 708 3.96e-34 140
Msa0964880 AT3G63480.2 31.124 347 205 9 129 454 1 334 4.72e-34 136
Msa0964880 AT5G27000.1 30.137 292 182 7 181 457 440 724 8.27e-34 139
Msa0964880 AT3G10310.2 30.523 344 206 9 132 457 364 692 8.55e-34 139
Msa0964880 AT3G10310.1 30.523 344 206 9 132 457 364 692 8.83e-34 139
Msa0964880 AT2G47500.1 29.191 346 207 9 132 457 400 727 1.17e-33 139
Msa0964880 AT2G47500.2 29.191 346 207 9 132 457 400 727 1.51e-33 138
Msa0964880 AT3G54870.3 32.313 294 171 6 181 451 150 438 1.88e-33 138
Msa0964880 AT3G54870.1 32.313 294 171 6 181 451 150 438 1.95e-33 138
Msa0964880 AT3G54870.2 32.313 294 171 6 181 451 150 438 2.67e-33 137
Msa0964880 AT1G63640.2 31.597 288 177 6 181 457 518 796 4.18e-33 137
Msa0964880 AT1G01950.2 31.070 383 215 11 98 450 35 398 4.20e-33 137
Msa0964880 AT1G01950.1 31.593 383 213 12 98 450 35 398 4.56e-33 137
Msa0964880 AT1G01950.3 31.593 383 213 12 98 450 35 398 4.78e-33 137
Msa0964880 AT1G63640.1 31.164 292 180 6 181 457 518 803 5.38e-33 137
Msa0964880 AT1G63640.4 31.164 292 180 6 181 457 518 803 5.38e-33 137
Msa0964880 AT1G63640.3 31.164 292 180 6 181 457 518 803 5.53e-33 137
Msa0964880 AT1G63640.5 31.164 292 180 6 181 457 508 793 5.57e-33 137
Msa0964880 AT5G41310.1 32.639 288 163 7 181 457 468 735 8.41e-33 136
Msa0964880 AT3G63480.1 30.966 352 203 11 129 454 1 338 1.09e-32 132
Msa0964880 AT3G17360.1 33.446 296 171 7 181 452 210 503 4.93e-32 134
Msa0964880 AT3G17360.2 33.446 296 171 7 181 452 210 503 5.03e-32 134
Msa0964880 AT3G17360.3 33.446 296 171 7 181 452 210 503 5.03e-32 134
Msa0964880 AT1G73860.1 30.952 294 181 8 180 457 554 841 7.19e-32 133
Msa0964880 AT1G73860.2 30.272 294 183 7 180 457 471 758 1.13e-31 132
Msa0964880 AT1G18410.3 31.293 294 179 9 180 457 534 820 3.85e-30 127
Msa0964880 AT1G18410.2 31.293 294 179 9 180 457 534 820 3.85e-30 127
Msa0964880 AT1G09170.5 30.479 292 181 7 181 457 479 763 5.08e-30 127
Msa0964880 AT1G18410.4 31.293 294 179 9 180 457 677 963 7.88e-30 127
Msa0964880 AT1G09170.4 30.479 292 181 7 181 457 479 763 8.22e-30 126
Msa0964880 AT1G09170.3 30.479 292 181 7 181 457 479 763 1.08e-29 126
Msa0964880 AT1G09170.7 30.479 292 181 7 181 457 479 763 1.08e-29 126
Msa0964880 AT1G09170.2 30.479 292 181 7 181 457 479 763 1.24e-29 126
Msa0964880 AT1G18410.5 30.345 290 179 8 180 457 524 802 2.26e-29 125
Msa0964880 AT1G18410.1 30.345 290 179 8 180 457 677 955 5.95e-29 124
Msa0964880 AT3G20150.2 28.010 382 219 13 104 454 80 436 8.85e-29 123
Msa0964880 AT3G20150.1 28.010 382 219 13 104 454 80 436 1.02e-28 123
Msa0964880 AT5G27950.2 37.615 218 118 4 250 454 26 238 1.34e-28 120
Msa0964880 AT1G09170.1 31.673 281 156 8 181 457 479 727 1.36e-27 119
Msa0964880 AT1G59540.2 36.715 207 124 5 254 455 30 234 7.39e-27 117
Msa0964880 AT4G15885.1 48.913 92 47 0 597 688 16 107 1.03e-25 102
Msa0964880 AT5G42490.1 32.624 282 171 9 131 404 9 279 5.79e-25 111
Msa0964880 AT5G42490.2 32.624 282 171 9 131 404 9 279 6.42e-25 111
Msa0964880 AT1G01950.4 32.692 260 146 7 217 450 1 257 1.10e-23 107
Msa0964880 AT3G51150.5 36.571 175 107 3 284 455 16 189 3.76e-22 102
Msa0964880 AT1G09170.6 29.528 254 157 7 181 419 479 725 4.23e-22 102
Msa0964880 AT1G09170.8 29.528 254 157 7 181 419 479 725 4.23e-22 102
Msa0964880 AT4G14330.1 29.276 304 170 9 180 458 88 371 5.34e-22 102
Msa0964880 AT5G65460.6 28.269 283 185 7 178 452 178 450 1.43e-19 94.4
Msa0964880 AT5G65460.2 28.269 283 185 7 178 452 178 450 1.46e-19 94.4
Msa0964880 AT5G65460.1 28.269 283 185 7 178 452 178 450 1.70e-19 94.4
Msa0964880 AT5G65460.4 28.269 283 185 7 178 452 178 450 1.80e-19 94.4
Msa0964880 AT5G23910.1 23.954 263 174 7 178 431 52 297 1.25e-18 90.9
Msa0964880 AT5G23910.2 23.954 263 174 7 178 431 56 301 1.34e-18 90.9
Msa0964880 AT5G65460.3 27.586 290 185 7 178 452 178 457 1.48e-18 91.3
Msa0964880 AT5G10470.2 27.211 294 174 9 178 452 182 454 1.22e-15 81.6
Msa0964880 AT5G10470.1 27.211 294 174 9 178 452 182 454 1.23e-15 81.6
Msa0964880 AT1G20060.4 29.841 315 180 13 141 428 122 422 9.54e-14 75.5
Msa0964880 AT1G20060.2 29.841 315 180 13 141 428 122 422 9.89e-14 75.5
Msa0964880 AT1G20060.7 29.841 315 180 13 141 428 122 422 1.01e-13 75.5
Msa0964880 AT1G20060.5 29.841 315 180 13 141 428 122 422 1.05e-13 75.5
Msa0964880 AT1G20060.8 29.841 315 180 13 141 428 122 422 1.06e-13 75.5
Msa0964880 AT1G20060.6 29.841 315 180 13 141 428 122 422 1.06e-13 75.5
Msa0964880 AT1G20060.9 29.841 315 180 13 141 428 122 422 1.22e-13 75.1
Msa0964880 AT1G20060.3 29.841 315 180 13 141 428 122 422 1.26e-13 75.1
Msa0964880 AT1G20060.10 29.841 315 180 13 141 428 122 422 1.28e-13 75.1
Msa0964880 AT5G65460.5 26.633 199 138 3 254 452 14 204 6.49e-11 66.2

Find 154 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGTGAGGGTTCTCTTTC+AGG 0.116815 6_3:+91948573 None:intergenic
TGTACTCATTTAAACGTTTC+TGG 0.121095 6_3:+91947474 None:intergenic
GAAGGGTCAATTCCAATTTC+TGG 0.172578 6_3:+91947284 None:intergenic
TTGGAATATCAATGGAACTA+TGG 0.223535 6_3:+91950546 None:intergenic
TGTGAGAAAATTTGAATCTA+TGG 0.272716 6_3:+91951498 None:intergenic
TGGTAGGATGGAGGGGAATT+TGG 0.273706 6_3:-91948526 Msa0964880:CDS
TAATCATCCAATTGATTTCC+TGG 0.291212 6_3:+91947572 None:intergenic
ACAAAGCCGGCTCGAGTTAT+AGG 0.292893 6_3:-91949559 Msa0964880:CDS
AGGAAACAGTAGATATTGTT+AGG 0.295808 6_3:-91947712 Msa0964880:CDS
TGAAGAAAGGGGATCCCTTC+TGG 0.303394 6_3:+91948707 None:intergenic
GCAATACAGTTGACTCTCTA+AGG 0.310108 6_3:+91948679 None:intergenic
TGCAGGGATATTTCAATTGC+AGG 0.312294 6_3:-91947513 Msa0964880:CDS
AAAGAGACCACTAAATAAAA+AGG 0.312615 6_3:-91951551 Msa0964880:CDS
TCCAGTGAGAGGAATCAATT+TGG 0.323280 6_3:-91948609 Msa0964880:CDS
ACATTAATCTTAAAATATCT+TGG 0.324272 6_3:+91949960 None:intergenic
GAAATCTTAGCAGCAATATC+TGG 0.326788 6_3:+91947372 None:intergenic
AAACAGCAGGTTTGCATTGT+TGG 0.345865 6_3:-91949742 Msa0964880:CDS
TGTCTTCCACAGCAGATAAC+TGG 0.350108 6_3:+91948367 None:intergenic
TGCTTTGCATATGGCCAAAC+TGG 0.368210 6_3:-91950508 Msa0964880:intron
ATAATTGGAAACCTTGGCTT+TGG 0.370202 6_3:+91949927 None:intergenic
TAGAGAGTCAACTGTATTGC+CGG 0.376641 6_3:-91948676 Msa0964880:CDS
CATTGGCGTGGATCGGTCTC+TGG 0.380195 6_3:-91947350 Msa0964880:three_prime_UTR
CTTGACGCGGGTTTGTTCCC+CGG 0.398106 6_3:+91951793 None:intergenic
TTTGTTCTTTGGAATATCAA+TGG 0.398309 6_3:+91950538 None:intergenic
GGTTTGTTCCCCGGGAAAAT+CGG 0.398892 6_3:+91951802 None:intergenic
ATCAAATGATAATACCTTTG+AGG 0.400436 6_3:-91948649 Msa0964880:CDS
ATCCTTGATGCAAATTATCA+TGG 0.402543 6_3:-91953419 Msa0964880:CDS
TATTGCTGCTAAGATTTCAT+TGG 0.402564 6_3:-91947367 Msa0964880:three_prime_UTR
TACCTCGTTGACTCCTTTGT+TGG 0.403242 6_3:+91948484 None:intergenic
ATCAAACAATTTATTGAGAA+AGG 0.406572 6_3:-91949685 Msa0964880:CDS
CAAACTATCTTTCATAGATC+TGG 0.410293 6_3:-91949536 Msa0964880:CDS
ACAAACCCGCGTCAAGGTCT+CGG 0.410436 6_3:-91951786 Msa0964880:CDS
TCCATGTCGCGATCAAGTTC+AGG 0.413057 6_3:-91953476 Msa0964880:CDS
AAAGCAACTTGCTTTGCATA+TGG 0.413422 6_3:-91950517 Msa0964880:CDS
TATGCCCTTGGTCATTGTCT+AGG 0.414060 6_3:+91948984 None:intergenic
CACAATCAAATCACCCTGTT+GGG 0.417350 6_3:-91947177 Msa0964880:three_prime_UTR
GTATTATCATTTGATAAAAC+CGG 0.420006 6_3:+91948657 None:intergenic
AATACAAGCAACAACCCAAC+AGG 0.421545 6_3:+91947163 None:intergenic
TGTATGTCCACATGCTTGTT+TGG 0.423741 6_3:-91947230 Msa0964880:three_prime_UTR
CAAACCCGCGTCAAGGTCTC+GGG 0.429972 6_3:-91951785 Msa0964880:CDS
CATTAATCTTAAAATATCTT+GGG 0.432607 6_3:+91949961 None:intergenic
CTCTAAGGTTTGATGAAGAA+AGG 0.435742 6_3:+91948694 None:intergenic
TCAAAATGTAAAACAAATGA+AGG 0.436620 6_3:+91947266 None:intergenic
TCTAAGGTTTGATGAAGAAA+GGG 0.442068 6_3:+91948695 None:intergenic
ATGCAAATTATCATGGAAGA+TGG 0.442442 6_3:-91953412 Msa0964880:CDS
TCAAAATGACAGAGCTGAAA+AGG 0.443833 6_3:-91948460 Msa0964880:CDS
AAATTAAATTTCAGGATTGA+AGG 0.444790 6_3:-91949055 Msa0964880:intron
AGAAGAAGCGCGTGTGGGGA+TGG 0.446686 6_3:+91953710 None:intergenic
GTCAATTTACTTCCTCTGAA+AGG 0.448674 6_3:+91948959 None:intergenic
TGGAATATCAATGGAACTAT+GGG 0.450430 6_3:+91950547 None:intergenic
TAGAAGTTTCTCAGCAGATA+AGG 0.453509 6_3:-91951740 Msa0964880:CDS
TCTTGCATTTCTCCAAGCTC+AGG 0.453669 6_3:-91948887 Msa0964880:CDS
GAACTCGATCTTCGAGTTTG+AGG 0.461782 6_3:-91953271 Msa0964880:CDS
TCAATTTACTTCCTCTGAAA+GGG 0.462646 6_3:+91948960 None:intergenic
GGAAACAGTAGATATTGTTA+GGG 0.469470 6_3:-91947711 Msa0964880:CDS
TGATCAACCAGGAAATCAAT+TGG 0.471649 6_3:-91947579 Msa0964880:CDS
TTCCATGATAATTTGCATCA+AGG 0.472405 6_3:+91953417 None:intergenic
TGCTCACATGAACCTGAGCT+TGG 0.477000 6_3:+91948875 None:intergenic
CCAACACGGTCCACATTAGC+TGG 0.477607 6_3:+91948552 None:intergenic
TTGACGCGGGTTTGTTCCCC+GGG 0.478168 6_3:+91951794 None:intergenic
AAGAATGTTGATAAGATCAC+TGG 0.479462 6_3:-91947317 Msa0964880:three_prime_UTR
TCCAAATTGATTCCTCTCAC+TGG 0.480394 6_3:+91948608 None:intergenic
ATTTCAATTGCAGGCGCAGT+TGG 0.484129 6_3:-91947504 Msa0964880:CDS
TCAGGTGTATGCTGAGACTG+TGG 0.484684 6_3:-91950572 Msa0964880:intron
CTCTGAAAGGGATATGCCCT+TGG 0.486036 6_3:+91948972 None:intergenic
ACTCTTTCGTTGGTGATTCA+CGG 0.488577 6_3:-91948922 Msa0964880:CDS
AGAGCATTAAAATCATCATC+AGG 0.489330 6_3:+91948279 None:intergenic
TAAAGTATAATTGGAAACCT+TGG 0.494288 6_3:+91949921 None:intergenic
ACAAGAAGTACTGGTACAAC+CGG 0.494748 6_3:-91949655 Msa0964880:CDS
CTGTTTCCTCCACTTGTCTA+CGG 0.495430 6_3:+91947726 None:intergenic
ATGCCCTTGGTCATTGTCTA+GGG 0.495933 6_3:+91948985 None:intergenic
TCACTTACTTTCTATCATTG+AGG 0.495950 6_3:+91949861 None:intergenic
CAGGGTAAAGAGCCTTTCAA+AGG 0.501237 6_3:-91948739 Msa0964880:CDS
GTTCTGTCTTGCACATATGT+TGG 0.503973 6_3:+91948420 None:intergenic
GGAAATGCTACAAGAAGTAC+TGG 0.505942 6_3:-91949664 Msa0964880:CDS
AAAGGAAATAGCAAAGAAAG+AGG 0.509498 6_3:-91951533 Msa0964880:CDS
TTTGACGAGTCATACTGCTC+AGG 0.516715 6_3:-91951848 Msa0964880:CDS
CTCTTTGAAGCTGATCAACC+AGG 0.521879 6_3:-91947590 Msa0964880:CDS
GAAGAAGCGCGTGTGGGGAT+GGG 0.522698 6_3:+91953711 None:intergenic
AAGATTTCATTGGCGTGGAT+CGG 0.523159 6_3:-91947357 Msa0964880:three_prime_UTR
GATGATCGTTTGTTTACTAG+TGG 0.526721 6_3:-91953239 Msa0964880:CDS
TGGAGCTATTACCCTTTGAA+AGG 0.526994 6_3:+91948727 None:intergenic
ACACAATCAAATCACCCTGT+TGG 0.527197 6_3:-91947178 Msa0964880:three_prime_UTR
GAACAAGAAAAGCGAGCAAG+AGG 0.527647 6_3:-91948401 Msa0964880:CDS
CTATCTTTCATAGATCTGGC+TGG 0.530008 6_3:-91949532 Msa0964880:CDS
GTTGGAAGTGGTAGGATGGA+GGG 0.536133 6_3:-91948534 Msa0964880:CDS
CCGTGTTGGAAGTGGTAGGA+TGG 0.539642 6_3:-91948538 Msa0964880:CDS
CTGCTAAGATTTCATTGGCG+TGG 0.540894 6_3:-91947362 Msa0964880:three_prime_UTR
TGGTACAACCGGTGCAAATG+AGG 0.541696 6_3:-91949644 Msa0964880:CDS
TGTTGGTCAGAGTACAAAGA+TGG 0.542533 6_3:+91948501 None:intergenic
TGGGATGCTTTGAGAGGCAA+TGG 0.552638 6_3:+91949980 None:intergenic
GTTCTGCGAGACTCTTTCGT+TGG 0.552848 6_3:-91948932 Msa0964880:CDS
AGGGTAAAGAGCCTTTCAAA+GGG 0.553658 6_3:-91948738 Msa0964880:CDS
TGTTGGAAGTGGTAGGATGG+AGG 0.558974 6_3:-91948535 Msa0964880:CDS
ACCCTCACTTCCAGCTAATG+TGG 0.565396 6_3:-91948562 Msa0964880:CDS
CTTGCACATATGTTGGTGCT+AGG 0.569229 6_3:+91948427 None:intergenic
TTGACGAGTCATACTGCTCA+GGG 0.569496 6_3:-91951847 Msa0964880:CDS
GAGGGAGGATGGTAAACAGC+AGG 0.571145 6_3:-91949755 Msa0964880:CDS
AAAACTGTACTTTAGGGAGT+GGG 0.574615 6_3:-91950021 Msa0964880:intron
ACACATTGAGATACGCTGAC+AGG 0.577310 6_3:-91948844 Msa0964880:intron
ATATGTTATTTCATCCTCAA+AGG 0.579299 6_3:+91948635 None:intergenic
AGCAAAGAAGAAGCGCGTGT+GGG 0.579451 6_3:+91953705 None:intergenic
AACTGCTCACCGTAGACAAG+TGG 0.582272 6_3:-91947735 Msa0964880:CDS
CAAAGGGTAATAGCTCCAGA+AGG 0.582303 6_3:-91948722 Msa0964880:CDS
TTGTGAAAGTTGAAGAAGAG+CGG 0.582391 6_3:+91953656 None:intergenic
AGTTTGCCTATAACTCGAGC+CGG 0.588121 6_3:+91949553 None:intergenic
ATATCTTGGGATGCTTTGAG+AGG 0.589205 6_3:+91949974 None:intergenic
CTGATAATGATAAGCAAACC+AGG 0.593497 6_3:-91949486 Msa0964880:intron
TAACATATGCTTCCAGTGAG+AGG 0.594508 6_3:-91948620 Msa0964880:CDS
CCAGCTAATGTGGACCGTGT+TGG 0.596175 6_3:-91948552 Msa0964880:CDS
CGGGGAACAAACCCGCGTCA+AGG 0.597241 6_3:-91951792 Msa0964880:CDS
TAACAACCAGTTATCTGCTG+TGG 0.598514 6_3:-91948373 Msa0964880:CDS
GTGAGAGGAATCAATTTGGA+TGG 0.598686 6_3:-91948605 Msa0964880:CDS
GTCCACATTAGCTGGAAGTG+AGG 0.598952 6_3:+91948560 None:intergenic
CTTTGTACTCTGACCAACAA+AGG 0.598992 6_3:-91948497 Msa0964880:CDS
CTAAGGTTTGATGAAGAAAG+GGG 0.601526 6_3:+91948696 None:intergenic
TTATCAAGAGATCAGCTGAT+GGG 0.607225 6_3:-91949588 Msa0964880:CDS
TCCTGAACTTGATCGCGACA+TGG 0.607962 6_3:+91953475 None:intergenic
AGTTCATGAAAGAAAACTCA+AGG 0.608554 6_3:-91951476 Msa0964880:intron
AGACGATTCCTCATTTGCAC+CGG 0.610571 6_3:+91949636 None:intergenic
TGCTCACCGTAGACAAGTGG+AGG 0.611420 6_3:-91947732 Msa0964880:CDS
TCATCAGCACAATCAGTCAC+CGG 0.612483 6_3:+91947436 None:intergenic
AAGCAAAGAAGAAGCGCGTG+TGG 0.612513 6_3:+91953704 None:intergenic
AACAGTAGATATTGTTAGGG+AGG 0.613165 6_3:-91947708 Msa0964880:intron
AATGTGGACCGTGTTGGAAG+TGG 0.614660 6_3:-91948546 Msa0964880:CDS
TGATGGGTCTGAAACAAAGC+CGG 0.621238 6_3:-91949572 Msa0964880:CDS
TCCACATTAGCTGGAAGTGA+GGG 0.625518 6_3:+91948561 None:intergenic
CAAAATGTAAAACAAATGAA+GGG 0.628374 6_3:+91947267 None:intergenic
AACCTTGGCTTTGGTATGTG+CGG 0.628454 6_3:+91949936 None:intergenic
TGAAACATCTTCATCCAGCA+CGG 0.628507 6_3:+91950701 None:intergenic
TTGGAAGTGGTAGGATGGAG+GGG 0.629835 6_3:-91948533 Msa0964880:CDS
GTTATCAAGAGATCAGCTGA+TGG 0.632123 6_3:-91949589 Msa0964880:CDS
TGTTGCTAAGATCAAAGTTG+CGG 0.633184 6_3:-91951704 Msa0964880:intron
CCATCCTACCACTTCCAACA+CGG 0.633834 6_3:+91948538 None:intergenic
GAATGTGTATTCTCAACATG+TGG 0.634314 6_3:+91948306 None:intergenic
CAAGGGCATATCCCTTTCAG+AGG 0.634504 6_3:-91948971 Msa0964880:CDS
AAGAAAAGCGAGCAAGAGGG+TGG 0.636469 6_3:-91948397 Msa0964880:CDS
AAAGGGTAATAGCTCCAGAA+GGG 0.636942 6_3:-91948721 Msa0964880:CDS
TGCTTGTTTGGCATAACATG+TGG 0.637111 6_3:-91947218 Msa0964880:three_prime_UTR
TACCGCACATACCAAAGCCA+AGG 0.637551 6_3:-91949938 Msa0964880:CDS
TTGGCATAACATGTGGAGTG+TGG 0.637619 6_3:-91947211 Msa0964880:three_prime_UTR
GCAAAGAAGAAGCGCGTGTG+GGG 0.640520 6_3:+91953706 None:intergenic
AAACCCGCGTCAAGGTCTCG+GGG 0.642280 6_3:-91951784 Msa0964880:CDS
AACAAGAAAAGCGAGCAAGA+GGG 0.650347 6_3:-91948400 Msa0964880:CDS
TTCACCTGCGCAAAAGACGA+AGG 0.650432 6_3:+91953383 None:intergenic
AAGCCCCGAGACCTTGACGC+GGG 0.650483 6_3:+91951781 None:intergenic
AGAGCCCTAGACAATGACCA+AGG 0.666299 6_3:-91948989 Msa0964880:CDS
TGTTATGCCAAACAAGCATG+TGG 0.669345 6_3:+91947223 None:intergenic
GAGCCCTAGACAATGACCAA+GGG 0.677606 6_3:-91948988 Msa0964880:CDS
CAAGCCCCGAGACCTTGACG+CGG 0.680118 6_3:+91951780 None:intergenic
GATCTGGCTGGAAGTGAACG+CGG 0.681301 6_3:-91949520 Msa0964880:CDS
ATACAAGCAACAACCCAACA+GGG 0.694088 6_3:+91947164 None:intergenic
TGGACCGTGTTGGAAGTGGT+AGG 0.760868 6_3:-91948542 Msa0964880:CDS
GACCAACAAAGGAGTCAACG+AGG 0.765144 6_3:-91948486 Msa0964880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAAAAAATTAATT+TGG - chr6_3:91952907-91952926 Msa0964880:intron 0.0%
!! ATAAAAAAAAAAATTAATTT+GGG - chr6_3:91952908-91952927 Msa0964880:intron 0.0%
!! TATTAAAATAAAAATCCAAT+AGG + chr6_3:91950524-91950543 None:intergenic 10.0%
!! AAAATAATAATCAAGTTAAT+AGG + chr6_3:91951759-91951778 None:intergenic 10.0%
!!! TTTGAGTTTGAAATTTTAAA+AGG + chr6_3:91947218-91947237 None:intergenic 15.0%
!!! ATTGAATTTTTTTGAATGTT+CGG - chr6_3:91947746-91947765 Msa0964880:CDS 15.0%
!! TTATTTCAATTAAGATAACA+AGG - chr6_3:91947826-91947845 Msa0964880:intron 15.0%
!! TATTTCAATTAAGATAACAA+GGG - chr6_3:91947827-91947846 Msa0964880:intron 15.0%
!! ATCATAATCATAAGATATTA+TGG + chr6_3:91948466-91948485 None:intergenic 15.0%
!!! TTTTTTCTATATTAAGTGTA+AGG - chr6_3:91950360-91950379 Msa0964880:intron 15.0%
!! ATATCAACAAAAATTTCAAA+AGG + chr6_3:91950792-91950811 None:intergenic 15.0%
!! CATTAATCTTAAAATATCTT+GGG + chr6_3:91950876-91950895 None:intergenic 15.0%
!! ACATTAATCTTAAAATATCT+TGG + chr6_3:91950877-91950896 None:intergenic 15.0%
!!! TTTAGTTTTTTCGAAATATA+TGG - chr6_3:91950932-91950951 Msa0964880:intron 15.0%
!!! TTAGTTTTTTCGAAATATAT+GGG - chr6_3:91950933-91950952 Msa0964880:intron 15.0%
!!! TGGTATTTTCTTTAATATTT+TGG - chr6_3:91953195-91953214 Msa0964880:intron 15.0%
!!! TTTTGTTGAAGAAATTTTCT+CGG + chr6_3:91947280-91947299 None:intergenic 20.0%
!!! TGTATGATTTTTTTTCTTTC+AGG - chr6_3:91947534-91947553 Msa0964880:CDS 20.0%
!!! TTTTTTTTCTTTCAGGAATA+TGG - chr6_3:91947541-91947560 Msa0964880:CDS 20.0%
!! AAATTTAACTGTTGAAATAG+CGG - chr6_3:91947771-91947790 Msa0964880:intron 20.0%
!! TATGACTAAAAAGAATAGTT+TGG - chr6_3:91947927-91947946 Msa0964880:intron 20.0%
!!! AACTAATTTTTACTAGCTTA+TGG - chr6_3:91947974-91947993 Msa0964880:intron 20.0%
!! TTATTTGTAGACTAATTAGT+TGG - chr6_3:91948532-91948551 Msa0964880:CDS 20.0%
!! TATTTGTAGACTAATTAGTT+GGG - chr6_3:91948533-91948552 Msa0964880:CDS 20.0%
!! TTATACAAAATAACGTATTG+TGG + chr6_3:91948722-91948741 None:intergenic 20.0%
!!! CTGTTATTTAACTAGTTATA+CGG - chr6_3:91948830-91948849 Msa0964880:intron 20.0%
!! TTTCTTATTATTGATGAACA+AGG - chr6_3:91949189-91949208 Msa0964880:intron 20.0%
!! TTCTTATTATTGATGAACAA+GGG - chr6_3:91949190-91949209 Msa0964880:intron 20.0%
!! AAATTTCTTGTGAAAAGATT+TGG - chr6_3:91950544-91950563 Msa0964880:CDS 20.0%
!! CGAAAAAACTAAAGTATAAT+TGG + chr6_3:91950925-91950944 None:intergenic 20.0%
!!! TAGTTTTTTCGAAATATATG+GGG - chr6_3:91950934-91950953 Msa0964880:intron 20.0%
!! TTAGAAAACGTATTTCTTAT+GGG - chr6_3:91951014-91951033 Msa0964880:intron 20.0%
!!! GTATTTATTTGATTGGTTTA+TGG - chr6_3:91951036-91951055 Msa0964880:intron 20.0%
!! ATCAAACAATTTATTGAGAA+AGG - chr6_3:91951149-91951168 Msa0964880:intron 20.0%
!! AAACAAATGAAACATACTAT+TGG - chr6_3:91951604-91951623 Msa0964880:intron 20.0%
!! AAATTAAATTTCAGGATTGA+AGG - chr6_3:91951779-91951798 Msa0964880:CDS 20.0%
!! GTATTATCATTTGATAAAAC+CGG + chr6_3:91952180-91952199 None:intergenic 20.0%
!! ATGTTTCACTAATAATTCAA+AGG - chr6_3:91952770-91952789 Msa0964880:intron 20.0%
!! CATATCATAAATATTTATCG+AGG + chr6_3:91953026-91953045 None:intergenic 20.0%
!!! TATTTTGGATTTTTTTATGC+AGG - chr6_3:91953210-91953229 Msa0964880:CDS 20.0%
!! CAAAATGTAAAACAAATGAA+GGG + chr6_3:91953570-91953589 None:intergenic 20.0%
!! TCAAAATGTAAAACAAATGA+AGG + chr6_3:91953571-91953590 None:intergenic 20.0%
!! TTTGTTGAAGAAATTTTCTC+GGG + chr6_3:91947279-91947298 None:intergenic 25.0%
! TTCTCAACTATCAAGTTTAT+CGG + chr6_3:91947699-91947718 None:intergenic 25.0%
! AGCGAAAAATTATAAGCTAT+AGG - chr6_3:91947858-91947877 Msa0964880:intron 25.0%
! CTAATTCAAATAACTTACAG+CGG - chr6_3:91948011-91948030 Msa0964880:intron 25.0%
!!! TTTTTTAAGTAAGATGACAG+AGG + chr6_3:91948062-91948081 None:intergenic 25.0%
! TTATGATTATGATTCCATTC+AGG - chr6_3:91948473-91948492 Msa0964880:CDS 25.0%
! ATTTGTAGACTAATTAGTTG+GGG - chr6_3:91948534-91948553 Msa0964880:CDS 25.0%
! AGAAAACTAGCAATTATCAT+AGG + chr6_3:91948568-91948587 None:intergenic 25.0%
!!! ATGATAATTGCTAGTTTTCT+AGG - chr6_3:91948568-91948587 Msa0964880:CDS 25.0%
! ATAAGAAACAAAGCATGAAA+AGG + chr6_3:91949177-91949196 None:intergenic 25.0%
! AAAGAGACCACTAAATAAAA+AGG - chr6_3:91949283-91949302 Msa0964880:intron 25.0%
!!! GCTATTTCCTTTTTATTTAG+TGG + chr6_3:91949293-91949312 None:intergenic 25.0%
! TGTGAGAAAATTTGAATCTA+TGG + chr6_3:91949339-91949358 None:intergenic 25.0%
! TGACTAAGTAGTCTATATTT+GGG + chr6_3:91949452-91949471 None:intergenic 25.0%
! TTGACTAAGTAGTCTATATT+TGG + chr6_3:91949453-91949472 None:intergenic 25.0%
!!! TTTGTTTCTACTTTATTTCC+TGG - chr6_3:91949794-91949813 Msa0964880:intron 25.0%
!!! AACTTTGTTTCCTATTTTCA+AGG + chr6_3:91949869-91949888 None:intergenic 25.0%
! AGAGAGAATATTTCAATCTA+AGG - chr6_3:91949945-91949964 Msa0964880:CDS 25.0%
!!! GTACAAGAAGAATATTTTAG+TGG + chr6_3:91950005-91950024 None:intergenic 25.0%
!!! TTTGTTCTTTGGAATATCAA+TGG + chr6_3:91950299-91950318 None:intergenic 25.0%
!!! CTTTACGTTTCTTAATTTGT+AGG - chr6_3:91950462-91950481 Msa0964880:intron 25.0%
! CACATATAATATAGTCCTAT+TGG - chr6_3:91950506-91950525 Msa0964880:intron 25.0%
! GTCTATAATTGAACTTATGT+TGG - chr6_3:91950652-91950671 Msa0964880:intron 25.0%
! AAGAAATGCAAAACACAATA+TGG - chr6_3:91950728-91950747 Msa0964880:CDS 25.0%
! AAACACAATATGGTAAACAT+AGG - chr6_3:91950738-91950757 Msa0964880:CDS 25.0%
! TGATATGAAAACTGTACTTT+AGG - chr6_3:91950806-91950825 Msa0964880:intron 25.0%
! GATATGAAAACTGTACTTTA+GGG - chr6_3:91950807-91950826 Msa0964880:intron 25.0%
! TAAAGTATAATTGGAAACCT+TGG + chr6_3:91950916-91950935 None:intergenic 25.0%
!!! AGTTTTTTCGAAATATATGG+GGG - chr6_3:91950935-91950954 Msa0964880:intron 25.0%
! CTTAGAAAACGTATTTCTTA+TGG - chr6_3:91951013-91951032 Msa0964880:intron 25.0%
! CTTATGGGTATTTATTTGAT+TGG - chr6_3:91951029-91951048 Msa0964880:intron 25.0%
!! ATAAGCTTTTTATCCAAACA+GGG + chr6_3:91951385-91951404 None:intergenic 25.0%
!! AATAAGCTTTTTATCCAAAC+AGG + chr6_3:91951386-91951405 None:intergenic 25.0%
! GGAGATGCAAATATATTATT+TGG + chr6_3:91951674-91951693 None:intergenic 25.0%
! CTGTTAAAAATCAAGTTAAC+TGG + chr6_3:91951728-91951747 None:intergenic 25.0%
! ATTGATCTCATGTAAAAATG+TGG - chr6_3:91952049-91952068 Msa0964880:intron 25.0%
! TTCTAATTGACTGATATTTC+AGG - chr6_3:91952076-91952095 Msa0964880:intron 25.0%
! TCTAATTGACTGATATTTCA+GGG - chr6_3:91952077-91952096 Msa0964880:intron 25.0%
! ATCAAATGATAATACCTTTG+AGG - chr6_3:91952185-91952204 Msa0964880:intron 25.0%
!!! ATATGTTATTTCATCCTCAA+AGG + chr6_3:91952202-91952221 None:intergenic 25.0%
! TTAGTGAAACATTAGAGTTA+CGG + chr6_3:91952762-91952781 None:intergenic 25.0%
! CTAATAATTCAAAGGAACTA+TGG - chr6_3:91952778-91952797 Msa0964880:intron 25.0%
!! AAACATGTGTTTTGTGAATT+GGG - chr6_3:91952849-91952868 Msa0964880:intron 25.0%
!! TTATTGATTGTTCTAAGCTT+TGG - chr6_3:91953175-91953194 Msa0964880:intron 25.0%
!!! AAATACCATTTTAACGCAAA+AGG - chr6_3:91953297-91953316 Msa0964880:intron 25.0%
TTTCTCGGGAAAAAATTAAG+TGG + chr6_3:91947265-91947284 None:intergenic 30.0%
ATCCTTGATGCAAATTATCA+TGG - chr6_3:91947415-91947434 Msa0964880:three_prime_UTR 30.0%
! TTCCATGATAATTTGCATCA+AGG + chr6_3:91947420-91947439 None:intergenic 30.0%
ATGCAAATTATCATGGAAGA+TGG - chr6_3:91947422-91947441 Msa0964880:three_prime_UTR 30.0%
! TATCAAGTTTATCGGCTATA+AGG + chr6_3:91947691-91947710 None:intergenic 30.0%
! TTTTAGTCATACCAGCTTAT+AGG + chr6_3:91947918-91947937 None:intergenic 30.0%
! TTTACTGAGCTAGTTTATAG+TGG + chr6_3:91948231-91948250 None:intergenic 30.0%
! TTTTGGTCCTATGAGTTTAT+AGG - chr6_3:91948313-91948332 Msa0964880:CDS 30.0%
AGTCTTAGCTTAATCTGTAT+TGG - chr6_3:91948380-91948399 Msa0964880:CDS 30.0%
GTCTTAGCTTAATCTGTATT+GGG - chr6_3:91948381-91948400 Msa0964880:CDS 30.0%
TTTGTAGACTAATTAGTTGG+GGG - chr6_3:91948535-91948554 Msa0964880:CDS 30.0%
TGTGTGAATATGCAAATGAT+TGG - chr6_3:91948605-91948624 Msa0964880:CDS 30.0%
GTGTGAATATGCAAATGATT+GGG - chr6_3:91948606-91948625 Msa0964880:CDS 30.0%
ATGTTCACAATGTCAAATAG+CGG - chr6_3:91948659-91948678 Msa0964880:CDS 30.0%
AGCATGAAAAGGAAACATAT+GGG + chr6_3:91949166-91949185 None:intergenic 30.0%
AAGCATGAAAAGGAAACATA+TGG + chr6_3:91949167-91949186 None:intergenic 30.0%
AAACAGAATGCAAATGCAAA+AGG + chr6_3:91949230-91949249 None:intergenic 30.0%
! TTTGCATTTGCATTCTGTTT+TGG - chr6_3:91949230-91949249 Msa0964880:intron 30.0%
AAAGGAAATAGCAAAGAAAG+AGG - chr6_3:91949301-91949320 Msa0964880:intron 30.0%
AGTTCATGAAAGAAAACTCA+AGG - chr6_3:91949358-91949377 Msa0964880:intron 30.0%
! ATAGGTTGACTTAAAATCTC+TGG - chr6_3:91949391-91949410 Msa0964880:intron 30.0%
TAGACTACTTAGTCAATGTT+TGG - chr6_3:91949457-91949476 Msa0964880:intron 30.0%
! ATTAGTTTATACTGCTTCTC+CGG - chr6_3:91949545-91949564 Msa0964880:CDS 30.0%
TGTTATTATGCTCAGTAGTT+TGG + chr6_3:91949638-91949657 None:intergenic 30.0%
! AATATTTTCACAAATCGAGC+AGG + chr6_3:91949730-91949749 None:intergenic 30.0%
! TACTTTATTTCCTGGTTTGA+AGG - chr6_3:91949802-91949821 Msa0964880:intron 30.0%
TCTTCTTGTACATAGATGAA+TGG - chr6_3:91950014-91950033 Msa0964880:intron 30.0%
! AACATTGACTGACAATTCAA+TGG - chr6_3:91950195-91950214 Msa0964880:intron 30.0%
!! ATTCAATGGTTTTGCTGTAA+TGG - chr6_3:91950209-91950228 Msa0964880:intron 30.0%
TGGAATATCAATGGAACTAT+GGG + chr6_3:91950290-91950309 None:intergenic 30.0%
TTGGAATATCAATGGAACTA+TGG + chr6_3:91950291-91950310 None:intergenic 30.0%
AAAAACCATACATACCAGTT+TGG + chr6_3:91950343-91950362 None:intergenic 30.0%
!! GATTTTGAAAACATACAGCA+CGG + chr6_3:91950438-91950457 None:intergenic 30.0%
ATCAAAATGGAAATGCTTTC+TGG + chr6_3:91950600-91950619 None:intergenic 30.0%
!! CTAAAATGAGAGCATCAAAA+TGG + chr6_3:91950613-91950632 None:intergenic 30.0%
! TTTGATGCTCTCATTTTAGA+TGG - chr6_3:91950614-91950633 Msa0964880:intron 30.0%
! CTCATTTTAGATGGTATTTG+TGG - chr6_3:91950623-91950642 Msa0964880:intron 30.0%
TAGATGGTATTTGTGGTATT+TGG - chr6_3:91950630-91950649 Msa0964880:intron 30.0%
TCACTTACTTTCTATCATTG+AGG + chr6_3:91950976-91950995 None:intergenic 30.0%
! TTTGCAGAAAACTTTTCATG+AGG - chr6_3:91951060-91951079 Msa0964880:intron 30.0%
! TTGCAGAAAACTTTTCATGA+GGG - chr6_3:91951061-91951080 Msa0964880:intron 30.0%
CAAACTATCTTTCATAGATC+TGG - chr6_3:91951298-91951317 Msa0964880:intron 30.0%
ATAAGCTGAAAACAGGTTAT+AGG - chr6_3:91951508-91951527 Msa0964880:CDS 30.0%
CAAATTCTTAGTTGAGTAAC+TGG - chr6_3:91951640-91951659 Msa0964880:intron 30.0%
! TCAATTTACTTCCTCTGAAA+GGG + chr6_3:91951877-91951896 None:intergenic 30.0%
AGATCAATCACTTTCTTACA+AGG + chr6_3:91952037-91952056 None:intergenic 30.0%
! TCTAAGGTTTGATGAAGAAA+GGG + chr6_3:91952142-91952161 None:intergenic 30.0%
! AGAGCATTAAAATCATCATC+AGG + chr6_3:91952558-91952577 None:intergenic 30.0%
!! TGATTTTAATGCTCTTCTGA+AGG - chr6_3:91952563-91952582 Msa0964880:intron 30.0%
CTCATAGTTACTGATAAATG+CGG - chr6_3:91952679-91952698 Msa0964880:intron 30.0%
TCCTAATACAAGTTGTAATG+TGG - chr6_3:91952708-91952727 Msa0964880:intron 30.0%
TCCACATTACAACTTGTATT+AGG + chr6_3:91952712-91952731 None:intergenic 30.0%
AATACAAGTTGTAATGTGGA+TGG - chr6_3:91952712-91952731 Msa0964880:intron 30.0%
GTTAGAGATGTAGGTAAAAT+TGG - chr6_3:91952811-91952830 Msa0964880:intron 30.0%
! CAAACATGTGTTTTGTGAAT+TGG - chr6_3:91952848-91952867 Msa0964880:intron 30.0%
! AACATGTGTTTTGTGAATTG+GGG - chr6_3:91952850-91952869 Msa0964880:intron 30.0%
TTGGGATTTGAAAGAAAACA+AGG - chr6_3:91952926-91952945 Msa0964880:intron 30.0%
AGGAAACAGTAGATATTGTT+AGG - chr6_3:91953122-91953141 Msa0964880:intron 30.0%
GGAAACAGTAGATATTGTTA+GGG - chr6_3:91953123-91953142 Msa0964880:intron 30.0%
! TAATCATCCAATTGATTTCC+TGG + chr6_3:91953265-91953284 None:intergenic 30.0%
TGTACTCATTTAAACGTTTC+TGG + chr6_3:91953363-91953382 None:intergenic 30.0%
TATTGCTGCTAAGATTTCAT+TGG - chr6_3:91953467-91953486 Msa0964880:CDS 30.0%
! AAGAATGTTGATAAGATCAC+TGG - chr6_3:91953517-91953536 Msa0964880:five_prime_UTR 30.0%
!!! TTGATAAGATCACTGGTTTT+TGG - chr6_3:91953524-91953543 Msa0964880:five_prime_UTR 30.0%
!! TTGTTGCTTGTATTTTGCAA+CGG - chr6_3:91953680-91953699 Msa0964880:five_prime_UTR 30.0%
TTGTGAAAGTTGAAGAAGAG+CGG + chr6_3:91947181-91947200 None:intergenic 35.0%
!! AATTATCAGAGTTTTGACGC+TGG + chr6_3:91947393-91947412 None:intergenic 35.0%
GATGATCGTTTGTTTACTAG+TGG - chr6_3:91947595-91947614 Msa0964880:CDS 35.0%
AGCTATGATTTAACCAACCT+CGG + chr6_3:91947659-91947678 None:intergenic 35.0%
TGAGATTATAGCCTATAAGC+TGG - chr6_3:91947904-91947923 Msa0964880:intron 35.0%
! TGGTAACATTTTCTCTCATG+AGG - chr6_3:91947947-91947966 Msa0964880:intron 35.0%
! GGTAACATTTTCTCTCATGA+GGG - chr6_3:91947948-91947967 Msa0964880:intron 35.0%
! AGAGCTAATAAGCTAGCTTA+TGG + chr6_3:91948193-91948212 None:intergenic 35.0%
! GTTATCAGACATGTCAGTTT+TGG - chr6_3:91948296-91948315 Msa0964880:CDS 35.0%
CTTACAGCCTATAAACTCAT+AGG + chr6_3:91948323-91948342 None:intergenic 35.0%
! AACTCATTTTGTCTTGCCAA+AGG - chr6_3:91948356-91948375 Msa0964880:CDS 35.0%
TCAGATTAATGCAACCTGAA+TGG + chr6_3:91948490-91948509 None:intergenic 35.0%
!! TATAAAGTGTTGCCAAACAG+TGG - chr6_3:91948737-91948756 Msa0964880:CDS 35.0%
TAGAAGTTTCTCAGCAGATA+AGG - chr6_3:91949094-91949113 Msa0964880:intron 35.0%
TGTTGCTAAGATCAAAGTTG+CGG - chr6_3:91949130-91949149 Msa0964880:intron 35.0%
! AAGAATTGCTTGCTAACTTC+CGG + chr6_3:91949567-91949586 None:intergenic 35.0%
TATCACAAATCCTTCAAACC+AGG + chr6_3:91949815-91949834 None:intergenic 35.0%
GATGAAGTGAGTATAACTAG+TGG - chr6_3:91950159-91950178 Msa0964880:intron 35.0%
!!! AGCAAGTTGCTTTTGTTCTT+TGG + chr6_3:91950310-91950329 None:intergenic 35.0%
! AAAGCAACTTGCTTTGCATA+TGG - chr6_3:91950317-91950336 Msa0964880:intron 35.0%
!! TGCGTCATCATTTTGTTGTA+CGG - chr6_3:91950386-91950405 Msa0964880:intron 35.0%
GAAAAGATTTGGCACTAACT+TGG - chr6_3:91950555-91950574 Msa0964880:CDS 35.0%
! AAAACTGTACTTTAGGGAGT+GGG - chr6_3:91950813-91950832 Msa0964880:intron 35.0%
ATAATTGGAAACCTTGGCTT+TGG + chr6_3:91950910-91950929 None:intergenic 35.0%
TTATCAAGAGATCAGCTGAT+GGG - chr6_3:91951246-91951265 Msa0964880:intron 35.0%
! CTGATAATGATAAGCAAACC+AGG - chr6_3:91951348-91951367 Msa0964880:intron 35.0%
ATAATGATAAGCAAACCAGG+TGG - chr6_3:91951351-91951370 Msa0964880:intron 35.0%
TAATGATAAGCAAACCAGGT+GGG - chr6_3:91951352-91951371 Msa0964880:intron 35.0%
CTTATTTCCACAAACTCTTC+AGG + chr6_3:91951493-91951512 None:intergenic 35.0%
TGTGGAAATAAGCTGAAAAC+AGG - chr6_3:91951501-91951520 Msa0964880:CDS 35.0%
!! AGTCTGCTTTAGAGATCTTA+TGG + chr6_3:91951551-91951570 None:intergenic 35.0%
GTCAATTTACTTCCTCTGAA+AGG + chr6_3:91951878-91951897 None:intergenic 35.0%
CTAAGGTTTGATGAAGAAAG+GGG + chr6_3:91952141-91952160 None:intergenic 35.0%
!! CTCTAAGGTTTGATGAAGAA+AGG + chr6_3:91952143-91952162 None:intergenic 35.0%
TCAAAATGACAGAGCTGAAA+AGG - chr6_3:91952374-91952393 Msa0964880:intron 35.0%
GAATGTGTATTCTCAACATG+TGG + chr6_3:91952531-91952550 None:intergenic 35.0%
! TGAAAGAAAACAAGGAGTGT+TGG - chr6_3:91952934-91952953 Msa0964880:intron 35.0%
AACAGTAGATATTGTTAGGG+AGG - chr6_3:91953126-91953145 Msa0964880:intron 35.0%
TGATCAACCAGGAAATCAAT+TGG - chr6_3:91953255-91953274 Msa0964880:CDS 35.0%
! TACAACGTTTTCTCATCTTC+CGG - chr6_3:91953379-91953398 Msa0964880:intron 35.0%
GAAATCTTAGCAGCAATATC+TGG + chr6_3:91953465-91953484 None:intergenic 35.0%
GCTATGATTTAACCAACCTC+GGG + chr6_3:91947658-91947677 None:intergenic 40.0%
GTTGAGAAACTATCTCGTAG+CGG - chr6_3:91947711-91947730 Msa0964880:CDS 40.0%
GATTAAGCTAAGACTGCCTT+TGG + chr6_3:91948375-91948394 None:intergenic 40.0%
TATTGTTAATCGCAGATCGC+AGG + chr6_3:91948810-91948829 None:intergenic 40.0%
GTCAAAGAATCAGCTCCAAA+CGG + chr6_3:91949519-91949538 None:intergenic 40.0%
!!! TGGCTAGTTTTAGAGTCATC+TGG + chr6_3:91949618-91949637 None:intergenic 40.0%
ATTCAAACCTCCACGTATGT+AGG - chr6_3:91949703-91949722 Msa0964880:CDS 40.0%
!! CTATTTTCAAGGACTTGTGC+AGG + chr6_3:91949858-91949877 None:intergenic 40.0%
CTGCACAAGTCCTTGAAAAT+AGG - chr6_3:91949856-91949875 Msa0964880:intron 40.0%
TGAAACATCTTCATCCAGCA+CGG + chr6_3:91950136-91950155 None:intergenic 40.0%
TATGGCCAAACTGGTATGTA+TGG - chr6_3:91950335-91950354 Msa0964880:intron 40.0%
TTGGCACTAACTTGGAATCT+TGG - chr6_3:91950563-91950582 Msa0964880:CDS 40.0%
! GAAAACTGTACTTTAGGGAG+TGG - chr6_3:91950812-91950831 Msa0964880:intron 40.0%
! ATATCTTGGGATGCTTTGAG+AGG + chr6_3:91950863-91950882 None:intergenic 40.0%
! CAGAAAACTTTTCATGAGGG+AGG - chr6_3:91951064-91951083 Msa0964880:intron 40.0%
! AAACTTTTCATGAGGGAGGA+TGG - chr6_3:91951068-91951087 Msa0964880:intron 40.0%
AAACAGCAGGTTTGCATTGT+TGG - chr6_3:91951092-91951111 Msa0964880:intron 40.0%
! GGAAATGCTACAAGAAGTAC+TGG - chr6_3:91951170-91951189 Msa0964880:intron 40.0%
!! ACAAGAAGTACTGGTACAAC+CGG - chr6_3:91951179-91951198 Msa0964880:intron 40.0%
GTTATCAAGAGATCAGCTGA+TGG - chr6_3:91951245-91951264 Msa0964880:intron 40.0%
CTATCTTTCATAGATCTGGC+TGG - chr6_3:91951302-91951321 Msa0964880:intron 40.0%
AAGCTATCCTGAAGAGTTTG+TGG - chr6_3:91951483-91951502 Msa0964880:CDS 40.0%
!! ACTCTTTCGTTGGTGATTCA+CGG - chr6_3:91951912-91951931 Msa0964880:intron 40.0%
AGGGTAAAGAGCCTTTCAAA+GGG - chr6_3:91952096-91952115 Msa0964880:intron 40.0%
TGGAGCTATTACCCTTTGAA+AGG + chr6_3:91952110-91952129 None:intergenic 40.0%
AAAGGGTAATAGCTCCAGAA+GGG - chr6_3:91952113-91952132 Msa0964880:intron 40.0%
! GCAATACAGTTGACTCTCTA+AGG + chr6_3:91952158-91952177 None:intergenic 40.0%
TAGAGAGTCAACTGTATTGC+CGG - chr6_3:91952158-91952177 Msa0964880:intron 40.0%
TAACATATGCTTCCAGTGAG+AGG - chr6_3:91952214-91952233 Msa0964880:intron 40.0%
TCCAGTGAGAGGAATCAATT+TGG - chr6_3:91952225-91952244 Msa0964880:intron 40.0%
! TCCAAATTGATTCCTCTCAC+TGG + chr6_3:91952229-91952248 None:intergenic 40.0%
GTGAGAGGAATCAATTTGGA+TGG - chr6_3:91952229-91952248 Msa0964880:intron 40.0%
TGTTGGTCAGAGTACAAAGA+TGG + chr6_3:91952336-91952355 None:intergenic 40.0%
CTTTGTACTCTGACCAACAA+AGG - chr6_3:91952337-91952356 Msa0964880:intron 40.0%
GTTCTGTCTTGCACATATGT+TGG + chr6_3:91952417-91952436 None:intergenic 40.0%
AACAAGAAAAGCGAGCAAGA+GGG - chr6_3:91952434-91952453 Msa0964880:intron 40.0%
TAACAACCAGTTATCTGCTG+TGG - chr6_3:91952461-91952480 Msa0964880:intron 40.0%
GTGGAAGACAAAAAGAAGAC+AGG - chr6_3:91952480-91952499 Msa0964880:intron 40.0%
CTTGTGTCGTATGATAAGTG+AGG - chr6_3:91952592-91952611 Msa0964880:intron 40.0%
!! ACAAGGAGTGTTGGTGTAAT+AGG - chr6_3:91952943-91952962 Msa0964880:intron 40.0%
TGAATGATTACTGCTCTGCT+CGG - chr6_3:91953052-91953071 Msa0964880:intron 40.0%
! TGCAGCCTTTTGCGTTAAAA+TGG + chr6_3:91953305-91953324 None:intergenic 40.0%
!! ATTTTAACGCAAAAGGCTGC+AGG - chr6_3:91953304-91953323 Msa0964880:intron 40.0%
! TTTTAACGCAAAAGGCTGCA+GGG - chr6_3:91953305-91953324 Msa0964880:intron 40.0%
TGCAGGGATATTTCAATTGC+AGG - chr6_3:91953321-91953340 Msa0964880:intron 40.0%
AAGATTTCATTGGCGTGGAT+CGG - chr6_3:91953477-91953496 Msa0964880:exon 40.0%
!!! GGTTTTTGGAGTCCAGAAAT+TGG - chr6_3:91953538-91953557 Msa0964880:five_prime_UTR 40.0%
GAAGGGTCAATTCCAATTTC+TGG + chr6_3:91953553-91953572 None:intergenic 40.0%
TGTATGTCCACATGCTTGTT+TGG - chr6_3:91953604-91953623 Msa0964880:five_prime_UTR 40.0%
TGTTATGCCAAACAAGCATG+TGG + chr6_3:91953614-91953633 None:intergenic 40.0%
TGCTTGTTTGGCATAACATG+TGG - chr6_3:91953616-91953635 Msa0964880:five_prime_UTR 40.0%
ACACAATCAAATCACCCTGT+TGG - chr6_3:91953656-91953675 Msa0964880:five_prime_UTR 40.0%
CACAATCAAATCACCCTGTT+GGG - chr6_3:91953657-91953676 Msa0964880:five_prime_UTR 40.0%
ATACAAGCAACAACCCAACA+GGG + chr6_3:91953673-91953692 None:intergenic 40.0%
AATACAAGCAACAACCCAAC+AGG + chr6_3:91953674-91953693 None:intergenic 40.0%
! GAACTCGATCTTCGAGTTTG+AGG - chr6_3:91947563-91947582 Msa0964880:CDS 45.0%
! TGATACTGAGCTTTTACCCG+AGG - chr6_3:91947639-91947658 Msa0964880:intron 45.0%
AAATAGCGGCTATAGCGTAG+TGG - chr6_3:91948673-91948692 Msa0964880:CDS 45.0%
TGTCAGCTATAGCCACTGTT+TGG + chr6_3:91948752-91948771 None:intergenic 45.0%
TGGCTATAGCTGACACTGTA+GGG - chr6_3:91948757-91948776 Msa0964880:intron 45.0%
TTTGACGAGTCATACTGCTC+AGG - chr6_3:91948986-91949005 Msa0964880:CDS 45.0%
TTGACGAGTCATACTGCTCA+GGG - chr6_3:91948987-91949006 Msa0964880:CDS 45.0%
AGAGAGCTGCTTAATGTTGC+AGG - chr6_3:91949256-91949275 Msa0964880:intron 45.0%
ACTCAAGGTGAGTACGTGAT+AGG - chr6_3:91949373-91949392 Msa0964880:intron 45.0%
TCAAGGACTTGTGCAGGAAA+TGG + chr6_3:91949852-91949871 None:intergenic 45.0%
TCAAGTCAACCTGCAGACAT+TGG + chr6_3:91950077-91950096 None:intergenic 45.0%
!!! GTTCTTTTTTGATGCCGTGC+TGG - chr6_3:91950119-91950138 Msa0964880:intron 45.0%
TGCTTTGCATATGGCCAAAC+TGG - chr6_3:91950326-91950345 Msa0964880:intron 45.0%
GGACAATTGTCTGACCAAGA+GGG - chr6_3:91950407-91950426 Msa0964880:intron 45.0%
!! AACCTTGGCTTTGGTATGTG+CGG + chr6_3:91950901-91950920 None:intergenic 45.0%
AGACGATTCCTCATTTGCAC+CGG + chr6_3:91951201-91951220 None:intergenic 45.0%
! TGATGGGTCTGAAACAAAGC+CGG - chr6_3:91951262-91951281 Msa0964880:intron 45.0%
AGTTTGCCTATAACTCGAGC+CGG + chr6_3:91951284-91951303 None:intergenic 45.0%
!! ACGACGGCTATTTCTGAATG+AGG + chr6_3:91951695-91951714 None:intergenic 45.0%
GAAATAGCCGTCGTACTATC+TGG - chr6_3:91951701-91951720 Msa0964880:intron 45.0%
AACTGGACCAGATAGTACGA+CGG + chr6_3:91951711-91951730 None:intergenic 45.0%
ATGCCCTTGGTCATTGTCTA+GGG + chr6_3:91951852-91951871 None:intergenic 45.0%
TATGCCCTTGGTCATTGTCT+AGG + chr6_3:91951853-91951872 None:intergenic 45.0%
TCTTGCATTTCTCCAAGCTC+AGG - chr6_3:91951947-91951966 Msa0964880:intron 45.0%
ACACATTGAGATACGCTGAC+AGG - chr6_3:91951990-91952009 Msa0964880:intron 45.0%
CAGGGTAAAGAGCCTTTCAA+AGG - chr6_3:91952095-91952114 Msa0964880:intron 45.0%
CAAAGGGTAATAGCTCCAGA+AGG - chr6_3:91952112-91952131 Msa0964880:intron 45.0%
TCCACATTAGCTGGAAGTGA+GGG + chr6_3:91952276-91952295 None:intergenic 45.0%
!! TACCTCGTTGACTCCTTTGT+TGG + chr6_3:91952353-91952372 None:intergenic 45.0%
! CTTGCACATATGTTGGTGCT+AGG + chr6_3:91952410-91952429 None:intergenic 45.0%
GAACAAGAAAAGCGAGCAAG+AGG - chr6_3:91952433-91952452 Msa0964880:intron 45.0%
TGTCTTCCACAGCAGATAAC+TGG + chr6_3:91952470-91952489 None:intergenic 45.0%
TGCTCTGCAGTTAGAGATGT+AGG - chr6_3:91952802-91952821 Msa0964880:intron 45.0%
CTGTTTCCTCCACTTGTCTA+CGG + chr6_3:91953111-91953130 None:intergenic 45.0%
!! CTCTTTGAAGCTGATCAACC+AGG - chr6_3:91953244-91953263 Msa0964880:CDS 45.0%
ATTTCAATTGCAGGCGCAGT+TGG - chr6_3:91953330-91953349 Msa0964880:intron 45.0%
TCATCAGCACAATCAGTCAC+CGG + chr6_3:91953401-91953420 None:intergenic 45.0%
CTGCTAAGATTTCATTGGCG+TGG - chr6_3:91953472-91953491 Msa0964880:CDS 45.0%
TTGGCATAACATGTGGAGTG+TGG - chr6_3:91953623-91953642 Msa0964880:five_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTTTTTC+AGG - chr6_3:91950244-91950263 Msa0964880:intron 5.0%
!!! ATTATTTTAAATTAAATTTC+AGG - chr6_3:91951771-91951790 Msa0964880:CDS 5.0%
! AGCAAAGAAGAAGCGCGTGT+GGG + chr6_3:91947132-91947151 None:intergenic 50.0%
! AAGCAAAGAAGAAGCGCGTG+TGG + chr6_3:91947133-91947152 None:intergenic 50.0%
TCCATGTCGCGATCAAGTTC+AGG - chr6_3:91947358-91947377 Msa0964880:three_prime_UTR 50.0%
TCCTGAACTTGATCGCGACA+TGG + chr6_3:91947362-91947381 None:intergenic 50.0%
! TCATCCTTCGTCTTTTGCGC+AGG - chr6_3:91947447-91947466 Msa0964880:exon 50.0%
TTCACCTGCGCAAAAGACGA+AGG + chr6_3:91947454-91947473 None:intergenic 50.0%
! ACTGAGCTTTTACCCGAGGT+TGG - chr6_3:91947643-91947662 Msa0964880:intron 50.0%
GTGGCTATAGCTGACACTGT+AGG - chr6_3:91948756-91948775 Msa0964880:intron 50.0%
TCGCAGATCGCAGGAAATAG+AGG + chr6_3:91948801-91948820 None:intergenic 50.0%
!! TGACTCTGAGCCGATTTTCC+CGG - chr6_3:91949022-91949041 Msa0964880:CDS 50.0%
! GGTTTGTTCCCCGGGAAAAT+CGG + chr6_3:91949035-91949054 None:intergenic 50.0%
TCAGGTGTATGCTGAGACTG+TGG - chr6_3:91950262-91950281 Msa0964880:intron 50.0%
CGGACAATTGTCTGACCAAG+AGG - chr6_3:91950406-91950425 Msa0964880:intron 50.0%
!! TGGGATGCTTTGAGAGGCAA+TGG + chr6_3:91950857-91950876 None:intergenic 50.0%
TACCGCACATACCAAAGCCA+AGG - chr6_3:91950896-91950915 Msa0964880:intron 50.0%
TGGTACAACCGGTGCAAATG+AGG - chr6_3:91951190-91951209 Msa0964880:intron 50.0%
!! ACAAAGCCGGCTCGAGTTAT+AGG - chr6_3:91951275-91951294 Msa0964880:intron 50.0%
TAAGCAAACCAGGTGGGACT+TGG - chr6_3:91951358-91951377 Msa0964880:intron 50.0%
AAGCAAACCAGGTGGGACTT+GGG - chr6_3:91951359-91951378 Msa0964880:intron 50.0%
AGAGCCCTAGACAATGACCA+AGG - chr6_3:91951845-91951864 Msa0964880:CDS 50.0%
GAGCCCTAGACAATGACCAA+GGG - chr6_3:91951846-91951865 Msa0964880:CDS 50.0%
! CTCTGAAAGGGATATGCCCT+TGG + chr6_3:91951865-91951884 None:intergenic 50.0%
! CAAGGGCATATCCCTTTCAG+AGG - chr6_3:91951863-91951882 Msa0964880:CDS 50.0%
GTTCTGCGAGACTCTTTCGT+TGG - chr6_3:91951902-91951921 Msa0964880:intron 50.0%
TGCTCACATGAACCTGAGCT+TGG + chr6_3:91951962-91951981 None:intergenic 50.0%
TGAAGAAAGGGGATCCCTTC+TGG + chr6_3:91952130-91952149 None:intergenic 50.0%
GGAAGTGAGGGTTCTCTTTC+AGG + chr6_3:91952264-91952283 None:intergenic 50.0%
ACCCTCACTTCCAGCTAATG+TGG - chr6_3:91952272-91952291 Msa0964880:intron 50.0%
GTCCACATTAGCTGGAAGTG+AGG + chr6_3:91952277-91952296 None:intergenic 50.0%
AATGTGGACCGTGTTGGAAG+TGG - chr6_3:91952288-91952307 Msa0964880:intron 50.0%
CCATCCTACCACTTCCAACA+CGG + chr6_3:91952299-91952318 None:intergenic 50.0%
TGTTGGAAGTGGTAGGATGG+AGG - chr6_3:91952299-91952318 Msa0964880:intron 50.0%
GTTGGAAGTGGTAGGATGGA+GGG - chr6_3:91952300-91952319 Msa0964880:intron 50.0%
TTGGAAGTGGTAGGATGGAG+GGG - chr6_3:91952301-91952320 Msa0964880:intron 50.0%
TGGTAGGATGGAGGGGAATT+TGG - chr6_3:91952308-91952327 Msa0964880:intron 50.0%
GACCAACAAAGGAGTCAACG+AGG - chr6_3:91952348-91952367 Msa0964880:intron 50.0%
AAGAAAAGCGAGCAAGAGGG+TGG - chr6_3:91952437-91952456 Msa0964880:intron 50.0%
TACTGCTCTGCTCGGCATTT+AGG - chr6_3:91953060-91953079 Msa0964880:intron 50.0%
! TCTGCTCGGCATTTAGGATG+AGG - chr6_3:91953066-91953085 Msa0964880:intron 50.0%
AACTGCTCACCGTAGACAAG+TGG - chr6_3:91953099-91953118 Msa0964880:intron 50.0%
! GCAAAGAAGAAGCGCGTGTG+GGG + chr6_3:91947131-91947150 None:intergenic 55.0%
!! GACTCTGAGCCGATTTTCCC+GGG - chr6_3:91949023-91949042 Msa0964880:CDS 55.0%
!! ACTCTGAGCCGATTTTCCCG+GGG - chr6_3:91949024-91949043 Msa0964880:CDS 55.0%
ACAAACCCGCGTCAAGGTCT+CGG - chr6_3:91949048-91949067 Msa0964880:intron 55.0%
AGCAGGTCCTACATACGTGG+AGG + chr6_3:91949713-91949732 None:intergenic 55.0%
TCGAGCAGGTCCTACATACG+TGG + chr6_3:91949716-91949735 None:intergenic 55.0%
!! ACCTGCAGACATTGGTGACG+CGG + chr6_3:91950069-91950088 None:intergenic 55.0%
ACAGCACGGACAAACCCTCT+TGG + chr6_3:91950424-91950443 None:intergenic 55.0%
GAGGGAGGATGGTAAACAGC+AGG - chr6_3:91951079-91951098 Msa0964880:intron 55.0%
GATCTGGCTGGAAGTGAACG+CGG - chr6_3:91951314-91951333 Msa0964880:intron 55.0%
CCAACACGGTCCACATTAGC+TGG + chr6_3:91952285-91952304 None:intergenic 55.0%
CCAGCTAATGTGGACCGTGT+TGG - chr6_3:91952282-91952301 Msa0964880:intron 55.0%
TGGACCGTGTTGGAAGTGGT+AGG - chr6_3:91952292-91952311 Msa0964880:intron 55.0%
CCGTGTTGGAAGTGGTAGGA+TGG - chr6_3:91952296-91952315 Msa0964880:intron 55.0%
TGCTCACCGTAGACAAGTGG+AGG - chr6_3:91953102-91953121 Msa0964880:intron 55.0%
! GAAGAAGCGCGTGTGGGGAT+GGG + chr6_3:91947126-91947145 None:intergenic 60.0%
! AGAAGAAGCGCGTGTGGGGA+TGG + chr6_3:91947127-91947146 None:intergenic 60.0%
! TTGACGCGGGTTTGTTCCCC+GGG + chr6_3:91949043-91949062 None:intergenic 60.0%
! CTTGACGCGGGTTTGTTCCC+CGG + chr6_3:91949044-91949063 None:intergenic 60.0%
CAAACCCGCGTCAAGGTCTC+GGG - chr6_3:91949049-91949068 Msa0964880:intron 60.0%
AAACCCGCGTCAAGGTCTCG+GGG - chr6_3:91949050-91949069 Msa0964880:intron 60.0%
! TCTCGCGTCTCAGTGCCGTT+TGG - chr6_3:91949501-91949520 Msa0964880:CDS 60.0%
TCCGCGTCACCAATGTCTGC+AGG - chr6_3:91950065-91950084 Msa0964880:intron 60.0%
CATTGGCGTGGATCGGTCTC+TGG - chr6_3:91953484-91953503 Msa0964880:exon 60.0%
CGGGGAACAAACCCGCGTCA+AGG - chr6_3:91949042-91949061 Msa0964880:CDS 65.0%
AAGCCCCGAGACCTTGACGC+GGG + chr6_3:91949056-91949075 None:intergenic 65.0%
CAAGCCCCGAGACCTTGACG+CGG + chr6_3:91949057-91949076 None:intergenic 65.0%
AACAGGGCCCAAGTCCCACC+TGG + chr6_3:91951369-91951388 None:intergenic 65.0%
GGTGGGACTTGGGCCCTGTT+TGG - chr6_3:91951369-91951388 Msa0964880:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 91947117 91953739 91947117 ID=Msa0964880;Name=Msa0964880
chr6_3 mRNA 91947117 91953739 91947117 ID=Msa0964880-mRNA-1;Parent=Msa0964880;Name=Msa0964880-mRNA-1;_AED=0.11;_eAED=0.11;_QI=244|0.90|0.91|1|1|1|12|331|692
chr6_3 exon 91947117 91947624 91947117 ID=Msa0964880-mRNA-1:exon:16653;Parent=Msa0964880-mRNA-1
chr6_3 exon 91947709 91947774 91947709 ID=Msa0964880-mRNA-1:exon:16652;Parent=Msa0964880-mRNA-1
chr6_3 exon 91948272 91948758 91948272 ID=Msa0964880-mRNA-1:exon:16651;Parent=Msa0964880-mRNA-1
chr6_3 exon 91948845 91949063 91948845 ID=Msa0964880-mRNA-1:exon:16650;Parent=Msa0964880-mRNA-1
chr6_3 exon 91949487 91949789 91949487 ID=Msa0964880-mRNA-1:exon:16649;Parent=Msa0964880-mRNA-1
chr6_3 exon 91949869 91950028 91949869 ID=Msa0964880-mRNA-1:exon:16648;Parent=Msa0964880-mRNA-1
chr6_3 exon 91950509 91950590 91950509 ID=Msa0964880-mRNA-1:exon:16647;Parent=Msa0964880-mRNA-1
chr6_3 exon 91950692 91950769 91950692 ID=Msa0964880-mRNA-1:exon:16646;Parent=Msa0964880-mRNA-1
chr6_3 exon 91951477 91951578 91951477 ID=Msa0964880-mRNA-1:exon:16645;Parent=Msa0964880-mRNA-1
chr6_3 exon 91951705 91951896 91951705 ID=Msa0964880-mRNA-1:exon:16644;Parent=Msa0964880-mRNA-1
chr6_3 exon 91953196 91953300 91953196 ID=Msa0964880-mRNA-1:exon:16643;Parent=Msa0964880-mRNA-1
chr6_3 exon 91953388 91953739 91953388 ID=Msa0964880-mRNA-1:exon:16642;Parent=Msa0964880-mRNA-1
chr6_3 five_prime_UTR 91953496 91953739 91953496 ID=Msa0964880-mRNA-1:five_prime_utr;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91953388 91953495 91953388 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91953196 91953300 91953196 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91951705 91951896 91951705 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91951477 91951578 91951477 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91950692 91950769 91950692 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91950509 91950590 91950509 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91949869 91950028 91949869 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91949487 91949789 91949487 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91948845 91949063 91948845 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91948272 91948758 91948272 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91947709 91947774 91947709 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 CDS 91947448 91947624 91947448 ID=Msa0964880-mRNA-1:cds;Parent=Msa0964880-mRNA-1
chr6_3 three_prime_UTR 91947117 91947447 91947117 ID=Msa0964880-mRNA-1:three_prime_utr;Parent=Msa0964880-mRNA-1
Gene Sequence

>Msa0964880

ATGTCGCGATCAAGTTCAGGAATTCATCACCAGCGTCAAAACTCTGATAATTTCATCCTTGATGCAAATTATCATGGAAGATGGTTTCATCCTTCGTCTTTTGCGCAGGAATATGGAACTCGATCTTCGAGTTTGAGGAAGAATGATGATGATCGTTTGTTTACTAGTGGATTGCTTGACTTGCATTCTTTTGATACTGAGCTTTTACCCGAGATGTGTGATGTTGTTTACAATGATTATTTGACGAGTCATACTGCTCAGGGACAGTATTTTGATGACTCTGAGCCGATTTTCCCGGGGAACAAACCCGCGTCAAGGTCTCGGGGCTTGCATGAGAGCAATGTTCTTAGAAGTTTCTCAGCAGATAAGGAGAAAGCAAACAATGTTGCTAAGATCAAAGTTGCGGTTAGAAAGAGACCACTAAATAAAAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACCATAGATTCAAATTTTCTCACAGTTCATGAAAGAAAACTCAAGGTTGACTTGACAGAATACGTCGAGAAACATGAGTTCTTTTTTGATGCCGTGCTGGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCCATAGTTCCATTGATATTCCAAAGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGGAGTGGGAAGACTTATACTATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGTACCGCACATACCAAAGCCAAGGTTTCCAATTATACTTTAGTTTTTTCGAAATATATGGGGGAAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTTCATGAGGGAGGATGGTAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTTTTTGAAGTTGAAACAATCAAACAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCGTCTCGATCGCATGCTATACTTCAGCTTGTTATCAAGAGATCAGCTGATGGGTCTGAAACAAAGCCGGCTCGAGTTATAGGCAAACTATCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCAGATACTACTGATAATGATAAGCAAACCAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCATTGAAAGAATGCATTAGAGCCCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACAGAAGTTCTGCGAGACTCTTTCGTTGGTGATTCACGGACTGTAATGATATCTTGCATTTCTCCAAGCTCAGGTTCATGTGAGCATACTCTCAACACATTGAGATACGCTGACAGGGTAAAGAGCCTTTCAAAGGGTAATAGCTCCAGAAGGGATCCCCTTTCTTCATCAAACCTTAGAGAGTCAACTGTATTGCCGGTTTTATCAAATGATAATACCTTTGAGGATGAAATAACATATGCTTCCAGTGAGAGGAATCAATTTGGATGGTCTAAACAGCCTGAAAGAGAACCCTCACTTCCAGCTAATGTGGACCGTGTTGGAAGTGGTAGGATGGAGGGGAATTTGGCACCATCTTTGTACTCTGACCAACAAAGGAGTCAACGAGGTATTCAAAATGACAGAGCTGAAAAGGAAAATGAATACCTAGCACCAACATATGTGCAAGACAGAACAAGAAAAGCGAGCAAGAGGGTGGATAACAACCAGTTATCTGCTGTGGAAGACAAAAAGAAGACAGGCTCTCGTGCTAAACATGTTAATCGACCACATGTTGAGAATACACATTCTGATCCTGATGATGATTTTAATGCTCTTCTGAAGGATGAGGAAGATCTTATAACTGCTCACCGTAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTACTCTTTGAAGCTGATCAACCAGGAAATCAATTGGATGATTATATTTCAAAATTAAATACCATTTTAACGCAAAAGGCTGCAGGGATATTTCAATTGCAGGCGCAGTTGGCTCAATTCCAGAAACGTTTAAATGAGTACAACGTTTTCTCATCTTCCGGTGACTGA
Protein sequence

>Msa0964880

MSRSSSGIHHQRQNSDNFILDANYHGRWFHPSSFAQEYGTRSSSLRKNDDDRLFTSGLLDLHSFDTELLPEMCDVVYNDYLTSHTAQGQYFDDSEPIFPGNKPASRSRGLHESNVLRSFSADKEKANNVAKIKVAVRKRPLNKKEIAKKEEDIITIDSNFLTVHERKLKVDLTEYVEKHEFFFDAVLDEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMYRTYQSQGFQLYFSFFEIYGGKLFDLLNDRKKLFMREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNATRSTGTTGANEESSRSHAILQLVIKRSADGSETKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRESTVLPVLSNDNTFEDEITYASSERNQFGWSKQPEREPSLPANVDRVGSGRMEGNLAPSLYSDQQRSQRGIQNDRAEKENEYLAPTYVQDRTRKASKRVDNNQLSAVEDKKKTGSRAKHVNRPHVENTHSDPDDDFNALLKDEEDLITAHRRQVEETVDIVREEMNLLFEADQPGNQLDDYISKLNTILTQKAAGIFQLQAQLAQFQKRLNEYNVFSSSGD*