Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194890 | XP_003593934.1 | 92.393 | 631 | 18 | 2 | 4 | 604 | 1 | 631 | 0.0 | 1191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194890 | sp|Q93Y37|MNS3_ARATH | 66.137 | 629 | 172 | 6 | 4 | 600 | 1 | 620 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194890 | G7IPW7 | 92.393 | 631 | 18 | 2 | 4 | 604 | 1 | 631 | 0.0 | 1191 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0194890 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
| Msa0012710 | Msa0194890 | 0.800133 | 1.662661e-48 | -8.615850e-47 |
| Msa0015670 | Msa0194890 | 0.815636 | 8.353809e-52 | -8.615850e-47 |
| Msa0028340 | Msa0194890 | 0.817501 | 3.191721e-52 | -8.615850e-47 |
| Msa0035120 | Msa0194890 | 0.802135 | 6.476151e-49 | -8.615850e-47 |
| Msa0041690 | Msa0194890 | 0.821167 | 4.662137e-53 | -8.615850e-47 |
| Msa0047640 | Msa0194890 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
| Msa0052870 | Msa0194890 | 0.810331 | 1.215558e-50 | -8.615850e-47 |
| Msa0054530 | Msa0194890 | 0.810258 | 1.260280e-50 | -8.615850e-47 |
| Msa0061500 | Msa0194890 | 0.816172 | 6.341282e-52 | -8.615850e-47 |
| Msa0064110 | Msa0194890 | 0.806962 | 6.376165e-50 | -8.615850e-47 |
| Msa0076170 | Msa0194890 | 0.820784 | 5.711135e-53 | -8.615850e-47 |
| Msa0089980 | Msa0194890 | 0.823933 | 1.060686e-53 | -8.615850e-47 |
| Msa0090010 | Msa0194890 | 0.821223 | 4.527003e-53 | -8.615850e-47 |
| Msa0092410 | Msa0194890 | 0.830225 | 3.310263e-55 | -8.615850e-47 |
| Msa0106620 | Msa0194890 | 0.816855 | 4.459702e-52 | -8.615850e-47 |
| Msa0112270 | Msa0194890 | 0.844235 | 8.570722e-59 | -8.615850e-47 |
| Msa0116790 | Msa0194890 | 0.829359 | 5.381013e-55 | -8.615850e-47 |
| Msa0124200 | Msa0194890 | 0.806927 | 6.486614e-50 | -8.615850e-47 |
| Msa0133720 | Msa0194890 | 0.804819 | 1.798397e-49 | -8.615850e-47 |
| Msa0133820 | Msa0194890 | 0.817720 | 2.849152e-52 | -8.615850e-47 |
| Msa0137540 | Msa0194890 | 0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0142460 | Msa0194890 | 0.803552 | 3.301277e-49 | -8.615850e-47 |
| Msa0143850 | Msa0194890 | 0.833167 | 6.229152e-56 | -8.615850e-47 |
| Msa0152560 | Msa0194890 | 0.803555 | 3.296317e-49 | -8.615850e-47 |
| Msa0158240 | Msa0194890 | 0.825357 | 4.897988e-54 | -8.615850e-47 |
| Msa0168570 | Msa0194890 | 0.828457 | 8.895985e-55 | -8.615850e-47 |
| Msa0187030 | Msa0194890 | 0.839511 | 1.516669e-57 | -8.615850e-47 |
| Msa0187830 | Msa0194890 | 0.805517 | 1.284809e-49 | -8.615850e-47 |
| Msa0189610 | Msa0194890 | 0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0191890 | Msa0194890 | 0.833671 | 4.664350e-56 | -8.615850e-47 |
| Msa0194860 | Msa0194890 | 0.974390 | 4.514196e-138 | -8.615850e-47 |
| Msa0194890 | Msa0213190 | 0.807803 | 4.228279e-50 | -8.615850e-47 |
| Msa0194890 | Msa0220730 | 0.801952 | 7.063872e-49 | -8.615850e-47 |
| Msa0194890 | Msa0225220 | 0.801245 | 9.861253e-49 | -8.615850e-47 |
| Msa0194890 | Msa0227340 | 0.825731 | 3.993854e-54 | -8.615850e-47 |
| Msa0194890 | Msa0230370 | 0.855358 | 6.656723e-62 | -8.615850e-47 |
| Msa0194890 | Msa0236070 | 0.817478 | 3.229047e-52 | -8.615850e-47 |
| Msa0194890 | Msa0236770 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0194890 | Msa0264830 | 0.815574 | 8.622409e-52 | -8.615850e-47 |
| Msa0194890 | Msa0269560 | 0.824153 | 9.415906e-54 | -8.615850e-47 |
| Msa0194890 | Msa0269590 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
| Msa0194890 | Msa0283470 | 0.810744 | 9.898954e-51 | -8.615850e-47 |
| Msa0194890 | Msa0302870 | 0.815976 | 7.014579e-52 | -8.615850e-47 |
| Msa0194890 | Msa0304100 | 0.855652 | 5.462936e-62 | -8.615850e-47 |
| Msa0194890 | Msa0305330 | 0.839768 | 1.300654e-57 | -8.615850e-47 |
| Msa0194890 | Msa0307570 | 0.809156 | 2.175138e-50 | -8.615850e-47 |
| Msa0194890 | Msa0312530 | 0.847360 | 1.214587e-59 | -8.615850e-47 |
| Msa0194890 | Msa0315380 | 0.878845 | 2.018793e-69 | -8.615850e-47 |
| Msa0194890 | Msa0319290 | 0.825294 | 5.068939e-54 | -8.615850e-47 |
| Msa0194890 | Msa0340340 | 0.817371 | 3.413820e-52 | -8.615850e-47 |
| Msa0194890 | Msa0341230 | 0.804337 | 2.267352e-49 | -8.615850e-47 |
| Msa0194890 | Msa0342010 | 0.804682 | 1.921137e-49 | -8.615850e-47 |
| Msa0194890 | Msa0346990 | 0.802365 | 5.807733e-49 | -8.615850e-47 |
| Msa0194890 | Msa0347950 | 0.808312 | 3.294909e-50 | -8.615850e-47 |
| Msa0194890 | Msa0347990 | 0.828297 | 9.722705e-55 | -8.615850e-47 |
| Msa0194890 | Msa0358400 | 0.810171 | 1.316212e-50 | -8.615850e-47 |
| Msa0194890 | Msa0363810 | 0.816933 | 4.283296e-52 | -8.615850e-47 |
| Msa0194890 | Msa0379610 | 0.823134 | 1.630703e-53 | -8.615850e-47 |
| Msa0194890 | Msa0382370 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0194890 | Msa0382490 | 0.815252 | 1.017020e-51 | -8.615850e-47 |
| Msa0194890 | Msa0403490 | 0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa0194890 | Msa0408340 | 0.817689 | 2.894924e-52 | -8.615850e-47 |
| Msa0194890 | Msa0411410 | 0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa0194890 | Msa0423840 | 0.812011 | 5.254196e-51 | -8.615850e-47 |
| Msa0194890 | Msa0432160 | 0.812922 | 3.322894e-51 | -8.615850e-47 |
| Msa0194890 | Msa0432170 | 0.804253 | 2.360985e-49 | -8.615850e-47 |
| Msa0194890 | Msa0432670 | 0.825393 | 4.802899e-54 | -8.615850e-47 |
| Msa0194890 | Msa0443020 | 0.809414 | 1.914336e-50 | -8.615850e-47 |
| Msa0194890 | Msa0464440 | 0.801050 | 1.081088e-48 | -8.615850e-47 |
| Msa0194890 | Msa0468800 | 0.806889 | 6.607050e-50 | -8.615850e-47 |
| Msa0194890 | Msa0476680 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa0194890 | Msa0506860 | 0.828410 | 9.129365e-55 | -8.615850e-47 |
| Msa0194890 | Msa0510290 | 0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0194890 | Msa0511150 | 0.813918 | 2.007062e-51 | -8.615850e-47 |
| Msa0194890 | Msa0514610 | 0.820881 | 5.425229e-53 | -8.615850e-47 |
| Msa0194890 | Msa0521010 | 0.810860 | 9.343699e-51 | -8.615850e-47 |
| Msa0194890 | Msa0553200 | 0.810055 | 1.394100e-50 | -8.615850e-47 |
| Msa0194890 | Msa0572750 | 0.833045 | 6.680867e-56 | -8.615850e-47 |
| Msa0194890 | Msa0579660 | 0.811281 | 7.571196e-51 | -8.615850e-47 |
| Msa0194890 | Msa0582280 | 0.823744 | 1.174531e-53 | -8.615850e-47 |
| Msa0194890 | Msa0583500 | 0.818434 | 1.964061e-52 | -8.615850e-47 |
| Msa0194890 | Msa0594200 | 0.801662 | 8.099495e-49 | -8.615850e-47 |
| Msa0194890 | Msa0597770 | 0.834235 | 3.369249e-56 | -8.615850e-47 |
| Msa0194890 | Msa0613700 | 0.803594 | 3.235816e-49 | -8.615850e-47 |
| Msa0194890 | Msa0615030 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0194890 | Msa0616450 | 0.804936 | 1.700691e-49 | -8.615850e-47 |
| Msa0194890 | Msa0626270 | 0.840640 | 7.700281e-58 | -8.615850e-47 |
| Msa0194890 | Msa0626460 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
| Msa0194890 | Msa0630940 | 0.810877 | 9.261946e-51 | -8.615850e-47 |
| Msa0194890 | Msa0656000 | 0.800104 | 1.685366e-48 | -8.615850e-47 |
| Msa0194890 | Msa0664540 | 0.830294 | 3.183781e-55 | -8.615850e-47 |
| Msa0194890 | Msa0689760 | 0.861613 | 9.069166e-64 | -8.615850e-47 |
| Msa0194890 | Msa0691340 | 0.811272 | 7.607982e-51 | -8.615850e-47 |
| Msa0194890 | Msa0696850 | 0.813894 | 2.031588e-51 | -8.615850e-47 |
| Msa0194890 | Msa0696860 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0194890 | Msa0698100 | 0.831446 | 1.662063e-55 | -8.615850e-47 |
| Msa0194890 | Msa0716860 | 0.857974 | 1.132466e-62 | -8.615850e-47 |
| Msa0194890 | Msa0750000 | 0.824920 | 6.212925e-54 | -8.615850e-47 |
| Msa0194890 | Msa0750250 | 0.815642 | 8.324800e-52 | -8.615850e-47 |
| Msa0194890 | Msa0751260 | 0.838186 | 3.338605e-57 | -8.615850e-47 |
| Msa0194890 | Msa0757020 | 0.804959 | 1.681418e-49 | -8.615850e-47 |
| Msa0194890 | Msa0757800 | 0.838388 | 2.962816e-57 | -8.615850e-47 |
| Msa0194890 | Msa0758250 | 0.824840 | 6.491025e-54 | -8.615850e-47 |
| Msa0194890 | Msa0760770 | 0.806973 | 6.340275e-50 | -8.615850e-47 |
| Msa0194890 | Msa0780280 | 0.824341 | 8.506784e-54 | -8.615850e-47 |
| Msa0194890 | Msa0789560 | 0.849644 | 2.832763e-60 | -8.615850e-47 |
| Msa0194890 | Msa0794210 | 0.804425 | 2.173837e-49 | -8.615850e-47 |
| Msa0194890 | Msa0795070 | 0.825740 | 3.974667e-54 | -8.615850e-47 |
| Msa0194890 | Msa0796630 | 0.803663 | 3.130492e-49 | -8.615850e-47 |
| Msa0194890 | Msa0809140 | 0.808097 | 3.661653e-50 | -8.615850e-47 |
| Msa0194890 | Msa0821800 | 0.814934 | 1.196232e-51 | -8.615850e-47 |
| Msa0194890 | Msa0828240 | 0.817053 | 4.026287e-52 | -8.615850e-47 |
| Msa0194890 | Msa0836650 | 0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0194890 | Msa0861830 | 0.805401 | 1.358733e-49 | -8.615850e-47 |
| Msa0194890 | Msa0865970 | 0.847501 | 1.111096e-59 | -8.615850e-47 |
| Msa0194890 | Msa0866070 | 0.842732 | 2.161037e-58 | -8.615850e-47 |
| Msa0194890 | Msa0903170 | 0.811401 | 7.133320e-51 | -8.615850e-47 |
| Msa0194890 | Msa0929950 | 0.827752 | 1.315433e-54 | -8.615850e-47 |
| Msa0194890 | Msa0937430 | 0.827859 | 1.239749e-54 | -8.615850e-47 |
| Msa0194890 | Msa0964880 | 0.814045 | 1.881040e-51 | -8.615850e-47 |
| Msa0194890 | Msa0969330 | 0.820303 | 7.365061e-53 | -8.615850e-47 |
| Msa0194890 | Msa0972480 | 0.812501 | 4.106524e-51 | -8.615850e-47 |
| Msa0194890 | Msa1010070 | 0.810711 | 1.006111e-50 | -8.615850e-47 |
| Msa0194890 | Msa1028280 | 0.801794 | 7.609870e-49 | -8.615850e-47 |
| Msa0194890 | Msa1031390 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0194890 | Msa1043120 | 0.820019 | 8.557347e-53 | -8.615850e-47 |
| Msa0194890 | Msa1043330 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0194890 | Msa1095790 | 0.868913 | 4.583782e-66 | -8.615850e-47 |
| Msa0194890 | Msa1098890 | 0.806752 | 7.060558e-50 | -8.615850e-47 |
| Msa0194890 | Msa1169720 | 0.801584 | 8.404862e-49 | -8.615850e-47 |
| Msa0194890 | Msa1188180 | 0.817677 | 2.912575e-52 | -8.615850e-47 |
| Msa0194890 | Msa1201640 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0194890 | Msa1209190 | 0.810294 | 1.237971e-50 | -8.615850e-47 |
| Msa0194890 | Msa1211340 | 0.814352 | 1.609345e-51 | -8.615850e-47 |
| Msa0194890 | Msa1219900 | 0.805976 | 1.029326e-49 | -8.615850e-47 |
| Msa0194890 | Msa1220000 | 0.801233 | 9.919950e-49 | -8.615850e-47 |
| Msa0194890 | Msa1234620 | 0.812822 | 3.493916e-51 | -8.615850e-47 |
| Msa0194890 | Msa1254620 | 0.805666 | 1.195786e-49 | -8.615850e-47 |
| Msa0194890 | Msa1259640 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa0194890 | Msa1262010 | 0.814255 | 1.690607e-51 | -8.615850e-47 |
| Msa0194890 | Msa1266330 | 0.819180 | 1.329882e-52 | -8.615850e-47 |
| Msa0194890 | Msa1266490 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
| Msa0194890 | Msa1283740 | 0.825027 | 5.861705e-54 | -8.615850e-47 |
| Msa0194890 | Msa1329790 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa0194890 | Msa1334400 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0194890 | Msa1334490 | 0.801433 | 9.026242e-49 | -8.615850e-47 |
| Msa0194890 | Msa1344310 | 0.806530 | 7.867202e-50 | -8.615850e-47 |
| Msa0194890 | Msa1349450 | 0.818555 | 1.843674e-52 | -8.615850e-47 |
| Msa0194890 | Msa1354200 | 0.958304 | 3.277202e-116 | -8.615850e-47 |
| Msa0194890 | Msa1360420 | 0.807418 | 5.104969e-50 | -8.615850e-47 |
| Msa0194890 | Msa1366300 | 0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0194890 | Msa1366550 | 0.831931 | 1.262110e-55 | -8.615850e-47 |
| Msa0194890 | Msa1393820 | 0.824481 | 7.886435e-54 | -8.615850e-47 |
| Msa0194890 | Msa1399260 | 0.807260 | 5.512734e-50 | -8.615850e-47 |
| Msa0194890 | Msa1401270 | 0.830768 | 2.438207e-55 | -8.615850e-47 |
| Msa0194890 | Msa1420250 | 0.860150 | 2.524340e-63 | -8.615850e-47 |
| Msa0194890 | Msa1422430 | 0.841966 | 3.448207e-58 | -8.615850e-47 |
| Msa0194890 | Msa1424630 | 0.821176 | 4.640375e-53 | -8.615850e-47 |
| Msa0194890 | Msa1426910 | 0.801042 | 1.084940e-48 | -8.615850e-47 |
| Msa0194890 | Msa1430550 | 0.842864 | 1.992996e-58 | -8.615850e-47 |
| Msa0194890 | Msa1433220 | 0.825799 | 3.848183e-54 | -8.615850e-47 |
| Msa0194890 | Msa1434040 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0194890 | Msa1446780 | 0.806002 | 1.016226e-49 | -8.615850e-47 |
| Msa0194890 | Msa1453360 | 0.820976 | 5.160360e-53 | -8.615850e-47 |
| Msa0194890 | Msa1458340 | 0.826764 | 2.267665e-54 | -8.615850e-47 |
| Msa0194890 | Msa1463030 | 0.826485 | 2.644257e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194890 | MtrunA17_Chr2g0286021 | 92.393 | 631 | 18 | 2 | 4 | 604 | 1 | 631 | 0.0 | 1191 |
| Msa0194890 | MtrunA17_Chr4g0002301 | 41.400 | 500 | 237 | 17 | 117 | 600 | 87 | 546 | 1.37e-100 | 317 |
| Msa0194890 | MtrunA17_Chr0c31g0494131 | 39.686 | 446 | 224 | 12 | 166 | 600 | 6 | 417 | 4.24e-85 | 273 |
| Msa0194890 | MtrunA17_Chr4g0071731 | 43.007 | 286 | 142 | 7 | 137 | 420 | 111 | 377 | 1.19e-60 | 208 |
| Msa0194890 | MtrunA17_Chr4g0059431 | 28.866 | 485 | 289 | 14 | 141 | 600 | 39 | 492 | 4.17e-41 | 157 |
| Msa0194890 | MtrunA17_Chr1g0187981 | 35.448 | 268 | 160 | 8 | 140 | 406 | 48 | 303 | 2.56e-31 | 129 |
| Msa0194890 | MtrunA17_Chr4g0071721 | 46.094 | 128 | 40 | 4 | 501 | 600 | 43 | 169 | 1.61e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194890 | AT1G30000.1 | 66.137 | 629 | 172 | 6 | 4 | 600 | 1 | 620 | 0.0 | 820 |
| Msa0194890 | AT1G30000.2 | 65.139 | 611 | 172 | 6 | 22 | 600 | 39 | 640 | 0.0 | 785 |
| Msa0194890 | AT1G51590.1 | 43.067 | 476 | 221 | 14 | 139 | 600 | 97 | 536 | 2.41e-104 | 327 |
| Msa0194890 | AT3G21160.1 | 42.227 | 476 | 225 | 13 | 139 | 600 | 98 | 537 | 2.47e-101 | 319 |
| Msa0194890 | AT1G51590.2 | 42.275 | 466 | 219 | 14 | 149 | 600 | 3 | 432 | 2.23e-100 | 313 |
| Msa0194890 | AT3G21160.2 | 42.958 | 284 | 141 | 6 | 139 | 420 | 98 | 362 | 1.79e-60 | 207 |
| Msa0194890 | AT5G43710.2 | 30.769 | 468 | 282 | 16 | 140 | 600 | 41 | 473 | 2.49e-43 | 164 |
| Msa0194890 | AT5G43710.3 | 30.769 | 468 | 282 | 16 | 140 | 600 | 41 | 473 | 3.25e-43 | 163 |
| Msa0194890 | AT5G43710.1 | 30.769 | 468 | 282 | 16 | 140 | 600 | 41 | 473 | 9.40e-43 | 163 |
| Msa0194890 | AT1G27520.1 | 29.339 | 484 | 276 | 15 | 140 | 600 | 38 | 478 | 2.18e-42 | 161 |
Find 127 sgRNAs with CRISPR-Local
Find 474 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAACTACAATACGGGTTT+TGG | 0.191966 | 2_1:+11341294 | Msa0194890:CDS |
| GTTTCTCGAGATCAAGTATT+TGG | 0.219206 | 2_1:+11340854 | Msa0194890:CDS |
| CAAATTTGTCCAATGGAATA+TGG | 0.229874 | 2_1:-11345857 | None:intergenic |
| CTGTTCTTGATATTGATCTT+TGG | 0.231658 | 2_1:+11340785 | Msa0194890:CDS |
| ACTAATTGCAGCCCTGATTC+TGG | 0.249584 | 2_1:+11341875 | Msa0194890:intron |
| ACAATCACGCTTTCGGTTAC+TGG | 0.250584 | 2_1:-11340738 | None:intergenic |
| AGTATTTATACTTGCTCTTT+GGG | 0.255746 | 2_1:+11345826 | Msa0194890:CDS |
| GTATCTGGTGATCAGAAATA+TGG | 0.270434 | 2_1:+11341577 | Msa0194890:CDS |
| AAGTATTTATACTTGCTCTT+TGG | 0.272048 | 2_1:+11345825 | Msa0194890:CDS |
| TCCTCCTAGAAGAGATAAAA+TGG | 0.274527 | 2_1:+11345776 | Msa0194890:CDS |
| CTGGAAGATTGAAGAAATTC+TGG | 0.283968 | 2_1:+11340918 | Msa0194890:CDS |
| AAAATGGAGACTTTCTTTCT+AGG | 0.288254 | 2_1:+11345792 | Msa0194890:CDS |
| TACTGGTGGCTATAGTTCTT+TGG | 0.292188 | 2_1:+11345734 | Msa0194890:CDS |
| TCGCCCTCGTTCTTTCTTCA+AGG | 0.310085 | 2_1:+11339708 | Msa0194890:CDS |
| TGCAGAACAACGTCACTAAA+TGG | 0.314282 | 2_1:-11341466 | None:intergenic |
| AATTATCTCAGTTCTGTATC+TGG | 0.316565 | 2_1:+11341562 | Msa0194890:CDS |
| CCATAGCTCGTTTCTTTGTA+AGG | 0.319234 | 2_1:-11344634 | None:intergenic |
| TTTGTTGGAGAATTGCCTTC+TGG | 0.325467 | 2_1:+11342088 | Msa0194890:CDS |
| TCTTGATACAGCTATGATAA+TGG | 0.327964 | 2_1:+11341183 | Msa0194890:CDS |
| CCACTAAACTGTCCAGAATC+AGG | 0.329510 | 2_1:-11341887 | None:intergenic |
| TCTAGATAAACAGATGGTTT+AGG | 0.332126 | 2_1:-11341382 | None:intergenic |
| ACTCATTTCTTCAAATTGAT+TGG | 0.333373 | 2_1:-11345906 | None:intergenic |
| TTATTACTCACTTTAGTATC+AGG | 0.346107 | 2_1:-11340974 | None:intergenic |
| GACCTTGTTCAGAAAATTCC+TGG | 0.347258 | 2_1:-11345380 | None:intergenic |
| CAACATGGAACTGACGGGTT+GGG | 0.368226 | 2_1:+11341133 | Msa0194890:CDS |
| AGCTAATACAATCACGCTTT+CGG | 0.368641 | 2_1:-11340745 | None:intergenic |
| TCAGTTCCATGTTGGCTAAC+TGG | 0.369221 | 2_1:-11341124 | None:intergenic |
| TTCTTCAAATTGATTGGTAT+AGG | 0.372002 | 2_1:-11345900 | None:intergenic |
| TTTGAAAAGTACACAAAGAT+TGG | 0.392558 | 2_1:+11345711 | Msa0194890:CDS |
| ATGAGTACTTACTCAAAGTA+TGG | 0.392656 | 2_1:+11341948 | Msa0194890:CDS |
| CTTGATACAGCTATGATAAT+GGG | 0.393096 | 2_1:+11341184 | Msa0194890:CDS |
| GGAACTAGTCCTTCAACCTT+TGG | 0.396608 | 2_1:-11341640 | None:intergenic |
| CCTGATTCTGGACAGTTTAG+TGG | 0.400177 | 2_1:+11341887 | Msa0194890:CDS |
| GATTGTATTAGCTGCAGTAC+TGG | 0.404778 | 2_1:+11340755 | Msa0194890:CDS |
| AACATGGAACTGACGGGTTG+GGG | 0.421095 | 2_1:+11341134 | Msa0194890:CDS |
| TAGTGGAGAAAATATTAGAC+TGG | 0.427714 | 2_1:+11341904 | Msa0194890:CDS |
| ATATTTATACGAGATGTATA+AGG | 0.428320 | 2_1:+11342006 | Msa0194890:CDS |
| GTCTTACAGATATCGTGAAT+GGG | 0.432699 | 2_1:+11345668 | Msa0194890:intron |
| ACAACGTCACTAAATGGAAT+AGG | 0.442276 | 2_1:-11341460 | None:intergenic |
| ATTCCATACCTAATGTAGAT+AGG | 0.447704 | 2_1:-11341661 | None:intergenic |
| AAGAATGACTCCACAGTCTC+AGG | 0.450720 | 2_1:-11345480 | None:intergenic |
| GAAACTACACGAGCTGGACT+TGG | 0.451907 | 2_1:-11340836 | None:intergenic |
| AGGAAGCAATGAATGGTGTT+AGG | 0.452243 | 2_1:+11342026 | Msa0194890:CDS |
| CGTCTAGTGTTGCAGGTACA+TGG | 0.452892 | 2_1:-11341000 | None:intergenic |
| GATTTGTCGTCTAGTGTTGC+AGG | 0.453510 | 2_1:-11341007 | None:intergenic |
| AACAGCAGTAATAGTGGTGC+TGG | 0.453878 | 2_1:+11340899 | Msa0194890:CDS |
| ATTTATTCGAAACTACAATA+CGG | 0.458553 | 2_1:+11341287 | Msa0194890:CDS |
| GACTAGTTCCTATCTACATT+AGG | 0.462538 | 2_1:+11341653 | Msa0194890:CDS |
| ACAAATCGTTGTGGATTACT+AGG | 0.463157 | 2_1:+11341023 | Msa0194890:CDS |
| GAAAGAACGAGGGCGAAACT+TGG | 0.463754 | 2_1:-11339701 | None:intergenic |
| TTTATTCGAAACTACAATAC+GGG | 0.471815 | 2_1:+11341288 | Msa0194890:CDS |
| TTCAACCCACGATCCCGCTT+CGG | 0.485302 | 2_1:-11341224 | None:intergenic |
| TGTCTTACAGATATCGTGAA+TGG | 0.485331 | 2_1:+11345667 | Msa0194890:intron |
| GTTAAGAAAACAGTTCCAAA+TGG | 0.487742 | 2_1:+11342058 | Msa0194890:CDS |
| AAGACTCTTCCAAAGGTTGA+AGG | 0.488433 | 2_1:+11341631 | Msa0194890:CDS |
| TGGTGATCAGAAATATGGTT+TGG | 0.490306 | 2_1:+11341582 | Msa0194890:CDS |
| GGGATTAGGTGCTACGGTAG+TGG | 0.492270 | 2_1:+11341156 | Msa0194890:CDS |
| GATGAAGTTGTTGCCGAAGC+GGG | 0.497419 | 2_1:+11341211 | Msa0194890:CDS |
| AAATTTGTCCAATGGAATAT+GGG | 0.503979 | 2_1:-11345856 | None:intergenic |
| TCTCTTGAGACCTGAGACTG+TGG | 0.504520 | 2_1:+11345470 | Msa0194890:CDS |
| GTGCATATCATCTAAGTGGC+GGG | 0.505905 | 2_1:+11341329 | Msa0194890:CDS |
| TCGTCAGCGCATAACGCTCC+TGG | 0.506455 | 2_1:+11341493 | Msa0194890:CDS |
| CATCTAAGTGGCGGGGAACA+AGG | 0.506851 | 2_1:+11341337 | Msa0194890:CDS |
| TCACTAAATGGAATAGGAGT+TGG | 0.513758 | 2_1:-11341454 | None:intergenic |
| TTAAAGACAAATTTGTCCAA+TGG | 0.515510 | 2_1:-11345864 | None:intergenic |
| TTGTTGCCGAAGCGGGATCG+TGG | 0.519393 | 2_1:+11341218 | Msa0194890:CDS |
| CCAACATGGAACTGACGGGT+TGG | 0.523038 | 2_1:+11341132 | Msa0194890:CDS |
| AAGTACACAAAGATTGGTAC+TGG | 0.525404 | 2_1:+11345717 | Msa0194890:CDS |
| CTTATGCCAGTTAGCCAACA+TGG | 0.526134 | 2_1:+11341118 | Msa0194890:CDS |
| AAATGGAATAGGAGTTGGAC+TGG | 0.534404 | 2_1:-11341449 | None:intergenic |
| ACAGATATCGTGAATGGGGT+TGG | 0.535004 | 2_1:+11345673 | Msa0194890:intron |
| ACAGAAAACAGCAGTAATAG+TGG | 0.535245 | 2_1:+11340893 | Msa0194890:CDS |
| GGTAATTGAGGAGGAAGTCT+TGG | 0.538080 | 2_1:-11340950 | None:intergenic |
| GAATTGCCTTCTGGATCAAA+TGG | 0.538225 | 2_1:+11342097 | Msa0194890:CDS |
| GGATAGCTCCCATATTCCAT+TGG | 0.541403 | 2_1:+11345848 | Msa0194890:CDS |
| ACATGGAACTGACGGGTTGG+GGG | 0.541952 | 2_1:+11341135 | Msa0194890:CDS |
| CACGCTTTCGGTTACTGGTG+AGG | 0.542696 | 2_1:-11340733 | None:intergenic |
| ATTGAAGAAATTCTGGAGAC+GGG | 0.549722 | 2_1:+11340925 | Msa0194890:CDS |
| TTAGTATCAGGTGGTAATTG+AGG | 0.554698 | 2_1:-11340962 | None:intergenic |
| GATTGAAGAAATTCTGGAGA+CGG | 0.555029 | 2_1:+11340924 | Msa0194890:CDS |
| TTAAGTGCATATCATCTAAG+TGG | 0.557241 | 2_1:+11341325 | Msa0194890:CDS |
| TCTCGAGAAACTACACGAGC+TGG | 0.558741 | 2_1:-11340842 | None:intergenic |
| ATGTATAAGGAAGCAATGAA+TGG | 0.559567 | 2_1:+11342019 | Msa0194890:CDS |
| TGATCAGAAATATGGTTTGG+AGG | 0.560762 | 2_1:+11341585 | Msa0194890:CDS |
| ATTGTATTAGCTGCAGTACT+GGG | 0.563271 | 2_1:+11340756 | Msa0194890:CDS |
| CACTAAACTGTCCAGAATCA+GGG | 0.563296 | 2_1:-11341886 | None:intergenic |
| AAACTACACGAGCTGGACTT+GGG | 0.563836 | 2_1:-11340835 | None:intergenic |
| ACCTTGTTCAGAAAATTCCT+GGG | 0.566706 | 2_1:-11345379 | None:intergenic |
| AAGAGATTATGACGATCAGC+AGG | 0.567199 | 2_1:-11345453 | None:intergenic |
| GTATTTATACTTGCTCTTTG+GGG | 0.567861 | 2_1:+11345827 | Msa0194890:CDS |
| GATTGGTATAGGATGTGCTT+CGG | 0.572064 | 2_1:-11345889 | None:intergenic |
| GTATCAGGTGGTAATTGAGG+AGG | 0.574049 | 2_1:-11340959 | None:intergenic |
| GCTGTTTCTAGATAAACAGA+TGG | 0.580943 | 2_1:-11341388 | None:intergenic |
| TGTTGCCGAAGCGGGATCGT+GGG | 0.581737 | 2_1:+11341219 | Msa0194890:CDS |
| GGAACGAACATAACTCATGC+AGG | 0.586541 | 2_1:+11341358 | Msa0194890:CDS |
| CCTTACAAAGAAACGAGCTA+TGG | 0.587299 | 2_1:+11344634 | Msa0194890:CDS |
| CATGGAACTGACGGGTTGGG+GGG | 0.590300 | 2_1:+11341136 | Msa0194890:CDS |
| TCTGGAGTAGGGTAGAGACT+TGG | 0.592323 | 2_1:-11339656 | None:intergenic |
| CCAACCCGTCAGTTCCATGT+TGG | 0.596884 | 2_1:-11341132 | None:intergenic |
| TTGCCTTCTGGATCAAATGG+TGG | 0.598116 | 2_1:+11342100 | Msa0194890:CDS |
| TTGGGCTATGTGTCAGCACA+AGG | 0.606708 | 2_1:-11340817 | None:intergenic |
| TTACTCACTTTAGTATCAGG+TGG | 0.608788 | 2_1:-11340971 | None:intergenic |
| GTTAGCCAACATGGAACTGA+CGG | 0.609641 | 2_1:+11341127 | Msa0194890:CDS |
| TCTGAACAAGGTCATGATGG+AGG | 0.609943 | 2_1:+11345390 | Msa0194890:CDS |
| AGTGGAGAAAATATTAGACT+GGG | 0.611043 | 2_1:+11341905 | Msa0194890:CDS |
| TTTGGAGGCAATGAAAGTCA+TGG | 0.611965 | 2_1:+11341600 | Msa0194890:CDS |
| TGATGAAGTTGTTGCCGAAG+CGG | 0.613160 | 2_1:+11341210 | Msa0194890:CDS |
| TGCATATCATCTAAGTGGCG+GGG | 0.615517 | 2_1:+11341330 | Msa0194890:CDS |
| AATATTAGACTGGGATCTCG+TGG | 0.617674 | 2_1:+11341914 | Msa0194890:CDS |
| TACACAAAGATTGGTACTGG+TGG | 0.617882 | 2_1:+11345720 | Msa0194890:CDS |
| GACGTGCTACTCAGTCCACC+AGG | 0.621157 | 2_1:-11341511 | None:intergenic |
| AAACCACCATTTGATCCAGA+AGG | 0.629172 | 2_1:-11342103 | None:intergenic |
| TCTTACAGATATCGTGAATG+GGG | 0.629365 | 2_1:+11345669 | Msa0194890:intron |
| TTAGCCAACATGGAACTGAC+GGG | 0.633004 | 2_1:+11341128 | Msa0194890:CDS |
| CATAAGCTCATCATAACCCA+TGG | 0.635367 | 2_1:-11341101 | None:intergenic |
| CACTAGACGACAAATCGTTG+TGG | 0.639219 | 2_1:+11341014 | Msa0194890:CDS |
| AGTGCATATCATCTAAGTGG+CGG | 0.641743 | 2_1:+11341328 | Msa0194890:CDS |
| ACTTTAGATCTTCTGTAATG+CGG | 0.651471 | 2_1:-11345512 | None:intergenic |
| ATGTGAAAGCAGATAGAAGA+CGG | 0.653738 | 2_1:-11341426 | None:intergenic |
| CTCAAAGTATGGCTTCAGAG+TGG | 0.662041 | 2_1:+11341959 | Msa0194890:CDS |
| TCAGCGCATAACGCTCCTGG+TGG | 0.663506 | 2_1:+11341496 | Msa0194890:CDS |
| GCACATAAAGACTCTTCCAA+AGG | 0.663995 | 2_1:+11341624 | Msa0194890:CDS |
| ATTGAACTCGAGCTGCAATG+TGG | 0.669842 | 2_1:-11341542 | None:intergenic |
| CAACCTTGAAGAAAGAACGA+GGG | 0.673362 | 2_1:-11339711 | None:intergenic |
| TGGGTATCAAAAGCATACAT+CGG | 0.679704 | 2_1:-11345360 | None:intergenic |
| GTATCAAAAGCATACATCGG+AGG | 0.706250 | 2_1:-11345357 | None:intergenic |
| GCAACCTTGAAGAAAGAACG+AGG | 0.709403 | 2_1:-11339712 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAGTGATTAAATTTT+GGG | - | chr2_1:11342585-11342604 | None:intergenic | 10.0% |
| !!! | ATTTTTAAGTGATTAAATTT+TGG | - | chr2_1:11342586-11342605 | None:intergenic | 10.0% |
| !! | AAATTTAATCACTTAAAAAT+TGG | + | chr2_1:11342586-11342605 | Msa0194890:intron | 10.0% |
| !! | ATATACATAAATGATTATTT+GGG | - | chr2_1:11345645-11345664 | None:intergenic | 10.0% |
| !! | TATATACATAAATGATTATT+TGG | - | chr2_1:11345646-11345665 | None:intergenic | 10.0% |
| !! | TATAATAAGAGAAATGAATA+GGG | - | chr2_1:11339744-11339763 | None:intergenic | 15.0% |
| !! | AAACATTGAATTAATAAATG+AGG | - | chr2_1:11339872-11339891 | None:intergenic | 15.0% |
| !!! | AATTCAATGTTTTTAGTTTT+TGG | + | chr2_1:11339880-11339899 | Msa0194890:intron | 15.0% |
| !!! | ATTCAATGTTTTTAGTTTTT+GGG | + | chr2_1:11339881-11339900 | Msa0194890:intron | 15.0% |
| !! | GTAAAATTTAAATATCAAGA+AGG | - | chr2_1:11340237-11340256 | None:intergenic | 15.0% |
| !! | AAAATGTATTTAATACAAGA+TGG | - | chr2_1:11340317-11340336 | None:intergenic | 15.0% |
| !! | CAATTAGAAACTTAAAAATT+AGG | - | chr2_1:11342164-11342183 | None:intergenic | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | - | chr2_1:11342310-11342329 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | - | chr2_1:11342311-11342330 | None:intergenic | 15.0% |
| !! | TTTAATACATATACAAACAA+AGG | + | chr2_1:11342352-11342371 | Msa0194890:intron | 15.0% |
| !! | ATTAAACCTCATTTAAAAAT+TGG | - | chr2_1:11343778-11343797 | None:intergenic | 15.0% |
| !! | TATTTATCATAATATCAGAT+AGG | - | chr2_1:11344006-11344025 | None:intergenic | 15.0% |
| !! | TGTGTGTATATATATATTTA+GGG | + | chr2_1:11345003-11345022 | Msa0194890:intron | 15.0% |
| !! | CTATAATAAGAGAAATGAAT+AGG | - | chr2_1:11339745-11339764 | None:intergenic | 20.0% |
| !! | TAAAGAAATTAGCATATGTT+GGG | + | chr2_1:11340486-11340505 | Msa0194890:intron | 20.0% |
| !! | ACAATTTAAAAGTTCAAGAA+GGG | - | chr2_1:11340563-11340582 | None:intergenic | 20.0% |
| !! | TACAATTTAAAAGTTCAAGA+AGG | - | chr2_1:11340564-11340583 | None:intergenic | 20.0% |
| !! | GTCGTTTACTTAAAATTAAA+AGG | + | chr2_1:11340657-11340676 | Msa0194890:intron | 20.0% |
| !! | ATTTATTCGAAACTACAATA+CGG | + | chr2_1:11341287-11341306 | Msa0194890:CDS | 20.0% |
| !! | ATATTTATACGAGATGTATA+AGG | + | chr2_1:11342006-11342025 | Msa0194890:CDS | 20.0% |
| !! | TATTAATTAGGGATATGTTT+AGG | - | chr2_1:11342299-11342318 | None:intergenic | 20.0% |
| !! | ATGTGAACAAAATTTCATTA+GGG | + | chr2_1:11342882-11342901 | Msa0194890:intron | 20.0% |
| !!! | GAAGGTTTTTAAAGATTAAA+GGG | - | chr2_1:11343426-11343445 | None:intergenic | 20.0% |
| !!! | AGAAGGTTTTTAAAGATTAA+AGG | - | chr2_1:11343427-11343446 | None:intergenic | 20.0% |
| !! | AAGAAAATAAGAGAAGAAAA+TGG | - | chr2_1:11343547-11343566 | None:intergenic | 20.0% |
| !! | TTAAATGATTAAACAATGCA+AGG | + | chr2_1:11343722-11343741 | Msa0194890:intron | 20.0% |
| !! | TAAATGATTAAACAATGCAA+GGG | + | chr2_1:11343723-11343742 | Msa0194890:intron | 20.0% |
| !! | TGATAATTTCAATCAACTAA+AGG | - | chr2_1:11343826-11343845 | None:intergenic | 20.0% |
| !! | TTAGTTGATTGAAATTATCA+TGG | + | chr2_1:11343826-11343845 | Msa0194890:intron | 20.0% |
| !! | TTTATAATCTGTTAAAATGC+AGG | - | chr2_1:11344153-11344172 | None:intergenic | 20.0% |
| !! | TTTCCTATTTATTAAGGATT+TGG | + | chr2_1:11344393-11344412 | Msa0194890:intron | 20.0% |
| !! | ATAATTTATTGCAAAAGACT+TGG | - | chr2_1:11344451-11344470 | None:intergenic | 20.0% |
| !! | AAAAGTGAAAACATTAAAAG+GGG | - | chr2_1:11344855-11344874 | None:intergenic | 20.0% |
| !! | GAAAAGTGAAAACATTAAAA+GGG | - | chr2_1:11344856-11344875 | None:intergenic | 20.0% |
| !! | TGAAAAGTGAAAACATTAAA+AGG | - | chr2_1:11344857-11344876 | None:intergenic | 20.0% |
| !! | CATATACAAAATGGTATATT+AGG | - | chr2_1:11344939-11344958 | None:intergenic | 20.0% |
| !! | GTGTGTGTATATATATATTT+AGG | + | chr2_1:11345002-11345021 | Msa0194890:intron | 20.0% |
| !! | GTGTGTATATATATATTTAG+GGG | + | chr2_1:11345004-11345023 | Msa0194890:intron | 20.0% |
| !! | AGTATTAATTAGAGGTTTAT+TGG | + | chr2_1:11345080-11345099 | Msa0194890:intron | 20.0% |
| !! | GTATTAATTAGAGGTTTATT+GGG | + | chr2_1:11345081-11345100 | Msa0194890:intron | 20.0% |
| !! | TATTAATTAGAGGTTTATTG+GGG | + | chr2_1:11345082-11345101 | Msa0194890:intron | 20.0% |
| !!! | TTTGAAAAGGTCTTATATTT+AGG | + | chr2_1:11345130-11345149 | Msa0194890:intron | 20.0% |
| !!! | TTGAAAAGGTCTTATATTTA+GGG | + | chr2_1:11345131-11345150 | Msa0194890:intron | 20.0% |
| !!! | ATGTGAAGTATTTTTTTACT+TGG | + | chr2_1:11345300-11345319 | Msa0194890:intron | 20.0% |
| !! | TTGGTTTATTGTAATTAGAA+TGG | + | chr2_1:11345319-11345338 | Msa0194890:intron | 20.0% |
| !! | AGTAATCTTATACATAAGAA+GGG | - | chr2_1:11345546-11345565 | None:intergenic | 20.0% |
| !! | AAGTAATCTTATACATAAGA+AGG | - | chr2_1:11345547-11345566 | None:intergenic | 20.0% |
| ! | GAGATTAAATACATCGTAAA+CGG | + | chr2_1:11339453-11339472 | Msa0194890:intron | 25.0% |
| !! | TGTTATTGTTGTTGTGAATT+TGG | + | chr2_1:11339606-11339625 | Msa0194890:intron | 25.0% |
| !!! | TTTTGTTTTTCTGTTTTTCG+TGG | + | chr2_1:11339778-11339797 | Msa0194890:intron | 25.0% |
| ! | AACATAGCAAACAACTAATT+TGG | - | chr2_1:11339942-11339961 | None:intergenic | 25.0% |
| ! | TTCAGCTTAATTAGTAATCT+TGG | + | chr2_1:11340087-11340106 | Msa0194890:intron | 25.0% |
| ! | TCAGCTTAATTAGTAATCTT+GGG | + | chr2_1:11340088-11340107 | Msa0194890:intron | 25.0% |
| ! | AAGAAGGAAAGTGATAAAAT+CGG | - | chr2_1:11340221-11340240 | None:intergenic | 25.0% |
| !!! | ACATTTTCTGTTTTAGTTGT+TGG | + | chr2_1:11340330-11340349 | Msa0194890:intron | 25.0% |
| ! | TTTATCACTCATATCTCATA+TGG | + | chr2_1:11340452-11340471 | Msa0194890:intron | 25.0% |
| ! | CTAAAGAAATTAGCATATGT+TGG | + | chr2_1:11340485-11340504 | Msa0194890:intron | 25.0% |
| !!! | TTGCTACTTCTTTATTTTTC+AGG | + | chr2_1:11340694-11340713 | Msa0194890:intron | 25.0% |
| ! | TTATTACTCACTTTAGTATC+AGG | - | chr2_1:11340977-11340996 | None:intergenic | 25.0% |
| ! | TTTATTCGAAACTACAATAC+GGG | + | chr2_1:11341288-11341307 | Msa0194890:CDS | 25.0% |
| ! | TCTAGAAACAGCTAAAAATT+TGG | + | chr2_1:11341399-11341418 | Msa0194890:CDS | 25.0% |
| ! | CTAGAAACAGCTAAAAATTT+GGG | + | chr2_1:11341400-11341419 | Msa0194890:CDS | 25.0% |
| ! | TCAATTAGTGTATTAGTATC+TGG | + | chr2_1:11341693-11341712 | Msa0194890:intron | 25.0% |
| ! | TGAAAGCGACTAAAAATATA+GGG | - | chr2_1:11341795-11341814 | None:intergenic | 25.0% |
| ! | GGACAAAAATAAAGTCAAAT+GGG | - | chr2_1:11342227-11342246 | None:intergenic | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr2_1:11342262-11342281 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr2_1:11342263-11342282 | None:intergenic | 25.0% |
| ! | TATACAAACAAAGGACAATA+TGG | + | chr2_1:11342361-11342380 | Msa0194890:intron | 25.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | + | chr2_1:11342434-11342453 | Msa0194890:intron | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | + | chr2_1:11342435-11342454 | Msa0194890:intron | 25.0% |
| ! | AATAGGGGTCATTTAAAAAA+TGG | + | chr2_1:11342525-11342544 | Msa0194890:intron | 25.0% |
| !!! | TAAGTGATTAAATTTTGGGA+GGG | - | chr2_1:11342581-11342600 | None:intergenic | 25.0% |
| !! | TTAAGTGATTAAATTTTGGG+AGG | - | chr2_1:11342582-11342601 | None:intergenic | 25.0% |
| ! | CAATTACAATTCAGAAACTA+TGG | - | chr2_1:11342771-11342790 | None:intergenic | 25.0% |
| ! | TCATCATAGAAAAATAACAG+TGG | - | chr2_1:11342861-11342880 | None:intergenic | 25.0% |
| ! | GATGTGAACAAAATTTCATT+AGG | + | chr2_1:11342881-11342900 | Msa0194890:intron | 25.0% |
| ! | TTAAATGAGGTTTAATTGCA+AGG | + | chr2_1:11343782-11343801 | Msa0194890:intron | 25.0% |
| ! | ATCATAATATCAGATAGGTT+GGG | - | chr2_1:11344001-11344020 | None:intergenic | 25.0% |
| ! | TATCATAATATCAGATAGGT+TGG | - | chr2_1:11344002-11344021 | None:intergenic | 25.0% |
| ! | ATCACATTATCAGTATATGA+TGG | - | chr2_1:11344035-11344054 | None:intergenic | 25.0% |
| ! | TATTGCAAATGTAAATGTTC+CGG | - | chr2_1:11344070-11344089 | None:intergenic | 25.0% |
| ! | ATTTGGAGAGATAAAAATGA+GGG | - | chr2_1:11344192-11344211 | None:intergenic | 25.0% |
| ! | AATTTGGAGAGATAAAAATG+AGG | - | chr2_1:11344193-11344212 | None:intergenic | 25.0% |
| ! | AATACCTTAGTTTATCTCAT+AGG | + | chr2_1:11344284-11344303 | Msa0194890:intron | 25.0% |
| ! | TAATCCTATGAGATAAACTA+AGG | - | chr2_1:11344291-11344310 | None:intergenic | 25.0% |
| ! | TTTCATATCTTGCAATATCT+TGG | + | chr2_1:11344312-11344331 | Msa0194890:intron | 25.0% |
| !! | CTCGATTTTCCTATTTATTA+AGG | + | chr2_1:11344387-11344406 | Msa0194890:intron | 25.0% |
| ! | ACTCCAAATCCTTAATAAAT+AGG | - | chr2_1:11344399-11344418 | None:intergenic | 25.0% |
| ! | TAAAAGGGGCTTATAAAAAA+AGG | - | chr2_1:11344841-11344860 | None:intergenic | 25.0% |
| ! | TTGTATCTAGTGATTTGAAA+AGG | + | chr2_1:11345117-11345136 | Msa0194890:intron | 25.0% |
| ! | GTAATCTTATACATAAGAAG+GGG | - | chr2_1:11345545-11345564 | None:intergenic | 25.0% |
| !! | AATCTTTGTGTACTTTTCAA+AGG | - | chr2_1:11345712-11345731 | None:intergenic | 25.0% |
| !! | TTTGAAAAGTACACAAAGAT+TGG | + | chr2_1:11345711-11345730 | Msa0194890:CDS | 25.0% |
| ! | AAGTATTTATACTTGCTCTT+TGG | + | chr2_1:11345825-11345844 | Msa0194890:CDS | 25.0% |
| ! | AGTATTTATACTTGCTCTTT+GGG | + | chr2_1:11345826-11345845 | Msa0194890:CDS | 25.0% |
| ! | AAATTTGTCCAATGGAATAT+GGG | - | chr2_1:11345859-11345878 | None:intergenic | 25.0% |
| ! | TTAAAGACAAATTTGTCCAA+TGG | - | chr2_1:11345867-11345886 | None:intergenic | 25.0% |
| ! | TTCTTCAAATTGATTGGTAT+AGG | - | chr2_1:11345903-11345922 | None:intergenic | 25.0% |
| AGTTAGTCAATGGAAGAAAA+TGG | + | chr2_1:11339392-11339411 | Msa0194890:intron | 30.0% | |
| CACAACAACAATAACAACTT+AGG | - | chr2_1:11339602-11339621 | None:intergenic | 30.0% | |
| ATAAGAGAAATGAATAGGGA+AGG | - | chr2_1:11339740-11339759 | None:intergenic | 30.0% | |
| TGTTAGAACTTGAGAATTGT+AGG | + | chr2_1:11339817-11339836 | Msa0194890:intron | 30.0% | |
| !! | ATTAGTTGTTTGCTATGTTC+TGG | + | chr2_1:11339943-11339962 | Msa0194890:intron | 30.0% |
| !! | TGACGTTTTGTATTAGTTTG+AGG | + | chr2_1:11340264-11340283 | Msa0194890:intron | 30.0% |
| ! | GAGGTGTGATTTCTTTTATT+TGG | + | chr2_1:11340283-11340302 | Msa0194890:intron | 30.0% |
| ATAAATCTCAAACTGACACA+AGG | - | chr2_1:11340600-11340619 | None:intergenic | 30.0% | |
| ! | GTGTCAGTTTGAGATTTATT+CGG | + | chr2_1:11340601-11340620 | Msa0194890:intron | 30.0% |
| CTGTTCTTGATATTGATCTT+TGG | + | chr2_1:11340785-11340804 | Msa0194890:CDS | 30.0% | |
| TCTTGATACAGCTATGATAA+TGG | + | chr2_1:11341183-11341202 | Msa0194890:CDS | 30.0% | |
| CTTGATACAGCTATGATAAT+GGG | + | chr2_1:11341184-11341203 | Msa0194890:CDS | 30.0% | |
| !!! | ACCTTTTTTGCTAATTCTCT+CGG | - | chr2_1:11341260-11341279 | None:intergenic | 30.0% |
| TTAAGTGCATATCATCTAAG+TGG | + | chr2_1:11341325-11341344 | Msa0194890:CDS | 30.0% | |
| TCTAGATAAACAGATGGTTT+AGG | - | chr2_1:11341385-11341404 | None:intergenic | 30.0% | |
| AATTATCTCAGTTCTGTATC+TGG | + | chr2_1:11341562-11341581 | Msa0194890:CDS | 30.0% | |
| ATTCCATACCTAATGTAGAT+AGG | - | chr2_1:11341664-11341683 | None:intergenic | 30.0% | |
| CTGAAAGCGACTAAAAATAT+AGG | - | chr2_1:11341796-11341815 | None:intergenic | 30.0% | |
| !!! | CTATATTTTTAGTCGCTTTC+AGG | + | chr2_1:11341794-11341813 | Msa0194890:intron | 30.0% |
| TAGTGGAGAAAATATTAGAC+TGG | + | chr2_1:11341904-11341923 | Msa0194890:CDS | 30.0% | |
| AGTGGAGAAAATATTAGACT+GGG | + | chr2_1:11341905-11341924 | Msa0194890:CDS | 30.0% | |
| ATGAGTACTTACTCAAAGTA+TGG | + | chr2_1:11341948-11341967 | Msa0194890:CDS | 30.0% | |
| ATGTATAAGGAAGCAATGAA+TGG | + | chr2_1:11342019-11342038 | Msa0194890:CDS | 30.0% | |
| GTTAAGAAAACAGTTCCAAA+TGG | + | chr2_1:11342058-11342077 | Msa0194890:CDS | 30.0% | |
| CAAAAATAAAGTCAAATGGG+TGG | - | chr2_1:11342224-11342243 | None:intergenic | 30.0% | |
| GGGACAAAAATAAAGTCAAA+TGG | - | chr2_1:11342228-11342247 | None:intergenic | 30.0% | |
| TGAAAAGGGGTTTAGATTTA+GGG | - | chr2_1:11342248-11342267 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTAGATTT+AGG | - | chr2_1:11342249-11342268 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr2_1:11342261-11342280 | None:intergenic | 30.0% | |
| AAGAGTTTGTAGAAGATGTA+TGG | + | chr2_1:11342931-11342950 | Msa0194890:intron | 30.0% | |
| AAGAAAATGGAAGAAAAGGA+AGG | - | chr2_1:11343534-11343553 | None:intergenic | 30.0% | |
| AGAGAAGAAAATGGAAGAAA+AGG | - | chr2_1:11343538-11343557 | None:intergenic | 30.0% | |
| GAAAAAACCATCAATAGTTC+AGG | - | chr2_1:11343902-11343921 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTCTTAGACGTTAT+CGG | + | chr2_1:11343913-11343932 | Msa0194890:intron | 30.0% |
| ! | TGATAATGTGATACTGTGAT+TGG | + | chr2_1:11344043-11344062 | Msa0194890:intron | 30.0% |
| !! | GCAGTTTTGTCTAATAGAAA+AGG | + | chr2_1:11344117-11344136 | Msa0194890:intron | 30.0% |
| ATAATCTGTTAAAATGCAGG+AGG | - | chr2_1:11344150-11344169 | None:intergenic | 30.0% | |
| CAAAGTGCAGAACTAAAATT+TGG | - | chr2_1:11344209-11344228 | None:intergenic | 30.0% | |
| CAGAACTTCAAATAACTAAG+AGG | + | chr2_1:11344543-11344562 | Msa0194890:intron | 30.0% | |
| !! | TCAAATAACTAAGAGGTATC+TGG | + | chr2_1:11344550-11344569 | Msa0194890:intron | 30.0% |
| GTATGAAAGTAAGCAATTTC+AGG | - | chr2_1:11344764-11344783 | None:intergenic | 30.0% | |
| AATTGCTTACTTTCATACTG+AGG | + | chr2_1:11344766-11344785 | Msa0194890:intron | 30.0% | |
| ACACACACACATATACAAAA+TGG | - | chr2_1:11344948-11344967 | None:intergenic | 30.0% | |
| ! | CTTAGTGGAGTATTAATTAG+AGG | + | chr2_1:11345072-11345091 | Msa0194890:intron | 30.0% |
| ! | CCTTTTTATAAGCACCTTTT+GGG | - | chr2_1:11345167-11345186 | None:intergenic | 30.0% |
| !! | CCAAAAGGTGCTTATAAAAA+GGG | + | chr2_1:11345165-11345184 | Msa0194890:intron | 30.0% |
| TGCTTATAAAAAGGGATTGA+TGG | + | chr2_1:11345173-11345192 | Msa0194890:intron | 30.0% | |
| ACTTTAGATCTTCTGTAATG+CGG | - | chr2_1:11345515-11345534 | None:intergenic | 30.0% | |
| AAAATGGAGACTTTCTTTCT+AGG | + | chr2_1:11345792-11345811 | Msa0194890:CDS | 30.0% | |
| GTATTTATACTTGCTCTTTG+GGG | + | chr2_1:11345827-11345846 | Msa0194890:CDS | 30.0% | |
| CAAATTTGTCCAATGGAATA+TGG | - | chr2_1:11345860-11345879 | None:intergenic | 30.0% | |
| GAATTTGGATCTGATCGAAT+CGG | + | chr2_1:11339621-11339640 | Msa0194890:intron | 35.0% | |
| !!! | TCAACATCTTTTCTGGAGTA+GGG | - | chr2_1:11339670-11339689 | None:intergenic | 35.0% |
| ! | ATCGTAGTCAACATCTTTTC+TGG | - | chr2_1:11339677-11339696 | None:intergenic | 35.0% |
| GCTAAGAAATTGTGACAGTA+AGG | - | chr2_1:11339920-11339939 | None:intergenic | 35.0% | |
| ATGAGTGATAAATCTTACCC+CGG | - | chr2_1:11340140-11340159 | None:intergenic | 35.0% | |
| TTAGTTGTTGGATGACGTAA+CGG | + | chr2_1:11340342-11340361 | Msa0194890:intron | 35.0% | |
| TTCAACTTAACTAGTAGCCT+CGG | + | chr2_1:11340377-11340396 | Msa0194890:intron | 35.0% | |
| GAGTGATAAATCTTAACCCA+GGG | - | chr2_1:11340442-11340461 | None:intergenic | 35.0% | |
| TGAGTGATAAATCTTAACCC+AGG | - | chr2_1:11340443-11340462 | None:intergenic | 35.0% | |
| AGCTAATACAATCACGCTTT+CGG | - | chr2_1:11340748-11340767 | None:intergenic | 35.0% | |
| ATTGTATTAGCTGCAGTACT+GGG | + | chr2_1:11340756-11340775 | Msa0194890:CDS | 35.0% | |
| GTTTCTCGAGATCAAGTATT+TGG | + | chr2_1:11340854-11340873 | Msa0194890:CDS | 35.0% | |
| ACAGAAAACAGCAGTAATAG+TGG | + | chr2_1:11340893-11340912 | Msa0194890:CDS | 35.0% | |
| CTGGAAGATTGAAGAAATTC+TGG | + | chr2_1:11340918-11340937 | Msa0194890:CDS | 35.0% | |
| ! | GATTGAAGAAATTCTGGAGA+CGG | + | chr2_1:11340924-11340943 | Msa0194890:CDS | 35.0% |
| ! | ATTGAAGAAATTCTGGAGAC+GGG | + | chr2_1:11340925-11340944 | Msa0194890:CDS | 35.0% |
| TTAGTATCAGGTGGTAATTG+AGG | - | chr2_1:11340965-11340984 | None:intergenic | 35.0% | |
| TTACTCACTTTAGTATCAGG+TGG | - | chr2_1:11340974-11340993 | None:intergenic | 35.0% | |
| ! | ACAAATCGTTGTGGATTACT+AGG | + | chr2_1:11341023-11341042 | Msa0194890:CDS | 35.0% |
| TACTAGGCAACAAAAAGTCA+AGG | + | chr2_1:11341039-11341058 | Msa0194890:CDS | 35.0% | |
| GGCTACAAAAAATATGCCAT+GGG | + | chr2_1:11341085-11341104 | Msa0194890:CDS | 35.0% | |
| ! | TTTTGCTAATTCTCTCGGAA+AGG | - | chr2_1:11341255-11341274 | None:intergenic | 35.0% |
| TCCGAGAGAATTAGCAAAAA+AGG | + | chr2_1:11341256-11341275 | Msa0194890:CDS | 35.0% | |
| ! | GAAACTACAATACGGGTTTT+GGG | + | chr2_1:11341295-11341314 | Msa0194890:CDS | 35.0% |
| !! | GCTGTTTCTAGATAAACAGA+TGG | - | chr2_1:11341391-11341410 | None:intergenic | 35.0% |
| ATGTGAAAGCAGATAGAAGA+CGG | - | chr2_1:11341429-11341448 | None:intergenic | 35.0% | |
| TCACTAAATGGAATAGGAGT+TGG | - | chr2_1:11341457-11341476 | None:intergenic | 35.0% | |
| ACAACGTCACTAAATGGAAT+AGG | - | chr2_1:11341463-11341482 | None:intergenic | 35.0% | |
| GTATCTGGTGATCAGAAATA+TGG | + | chr2_1:11341577-11341596 | Msa0194890:CDS | 35.0% | |
| TGGTGATCAGAAATATGGTT+TGG | + | chr2_1:11341582-11341601 | Msa0194890:CDS | 35.0% | |
| ! | TGATCAGAAATATGGTTTGG+AGG | + | chr2_1:11341585-11341604 | Msa0194890:CDS | 35.0% |
| ! | GACTAGTTCCTATCTACATT+AGG | + | chr2_1:11341653-11341672 | Msa0194890:CDS | 35.0% |
| GTTCCTATCTACATTAGGTA+TGG | + | chr2_1:11341658-11341677 | Msa0194890:intron | 35.0% | |
| TAGTAGAGATCTACTGAGAA+AGG | - | chr2_1:11341835-11341854 | None:intergenic | 35.0% | |
| CCAACAAAAACTAGTCCATT+TGG | - | chr2_1:11342076-11342095 | None:intergenic | 35.0% | |
| !!! | CCAAATGGACTAGTTTTTGT+TGG | + | chr2_1:11342073-11342092 | Msa0194890:CDS | 35.0% |
| !! | CTACCAGATGATCCATTTTT+GGG | - | chr2_1:11342132-11342151 | None:intergenic | 35.0% |
| CAAATGGGTGGTTAGATATA+GGG | - | chr2_1:11342212-11342231 | None:intergenic | 35.0% | |
| TCAAATGGGTGGTTAGATAT+AGG | - | chr2_1:11342213-11342232 | None:intergenic | 35.0% | |
| AATGTGAAAAAAGCAAAGGG+AGG | + | chr2_1:11342438-11342457 | Msa0194890:intron | 35.0% | |
| TTAAATGACCCCTATTTGCA+GGG | - | chr2_1:11342521-11342540 | None:intergenic | 35.0% | |
| TTTAAATGACCCCTATTTGC+AGG | - | chr2_1:11342522-11342541 | None:intergenic | 35.0% | |
| ! | TGATTAGCTGATGTAACTTG+CGG | + | chr2_1:11342641-11342660 | Msa0194890:intron | 35.0% |
| ! | TATGGTAAAGTTGTGTTGCT+GGG | - | chr2_1:11342753-11342772 | None:intergenic | 35.0% |
| TCTAATGGAAAGGTGAATGA+AGG | - | chr2_1:11342827-11342846 | None:intergenic | 35.0% | |
| TGGAACAAGAAGAGAGAATA+AGG | + | chr2_1:11342951-11342970 | Msa0194890:intron | 35.0% | |
| AAGAAGAGAGAATAAGGTAC+AGG | + | chr2_1:11342957-11342976 | Msa0194890:intron | 35.0% | |
| !!! | GCTCAAGTTTGTTGTGTTTT+GGG | - | chr2_1:11343009-11343028 | None:intergenic | 35.0% |
| !!! | TGCTCAAGTTTGTTGTGTTT+TGG | - | chr2_1:11343010-11343029 | None:intergenic | 35.0% |
| AGTGATAAGAACAGTGCTAT+TGG | - | chr2_1:11343128-11343147 | None:intergenic | 35.0% | |
| TGTCTATACCCAATACACAT+CGG | + | chr2_1:11343164-11343183 | Msa0194890:intron | 35.0% | |
| TGAATGTTCCGATGTGTATT+GGG | - | chr2_1:11343175-11343194 | None:intergenic | 35.0% | |
| TTGAATGTTCCGATGTGTAT+TGG | - | chr2_1:11343176-11343195 | None:intergenic | 35.0% | |
| ATGGAAGAAAAGGAAGGAAA+GGG | - | chr2_1:11343528-11343547 | None:intergenic | 35.0% | |
| AATGGAAGAAAAGGAAGGAA+AGG | - | chr2_1:11343529-11343548 | None:intergenic | 35.0% | |
| AACTCATCTGTTTACTGACA+TGG | - | chr2_1:11343670-11343689 | None:intergenic | 35.0% | |
| ATGTCAGTAAACAGATGAGT+TGG | + | chr2_1:11343669-11343688 | Msa0194890:intron | 35.0% | |
| ! | CAGGGACCAATTTTTAAATG+AGG | + | chr2_1:11343769-11343788 | Msa0194890:intron | 35.0% |
| TGATTGTCCTGAACTATTGA+TGG | + | chr2_1:11343892-11343911 | Msa0194890:intron | 35.0% | |
| TCTGAGTTTCAGATGAAAGA+GGG | - | chr2_1:11344527-11344546 | None:intergenic | 35.0% | |
| TTCTGAGTTTCAGATGAAAG+AGG | - | chr2_1:11344528-11344547 | None:intergenic | 35.0% | |
| TCTGGTTAATGTTGTCATTC+AGG | + | chr2_1:11344568-11344587 | Msa0194890:intron | 35.0% | |
| ATTCAGGTGTGTTTCTTATC+TGG | + | chr2_1:11344584-11344603 | Msa0194890:intron | 35.0% | |
| TTTCTTTGTAAGGCCTTTAG+TGG | - | chr2_1:11344627-11344646 | None:intergenic | 35.0% | |
| ! | CAGCAAGCTTCAAATTTTCT+AGG | - | chr2_1:11344685-11344704 | None:intergenic | 35.0% |
| ACTTTCATACTGAGGTTAGT+AGG | + | chr2_1:11344774-11344793 | Msa0194890:intron | 35.0% | |
| GGGCTTATAAAAAAAGGACA+GGG | - | chr2_1:11344835-11344854 | None:intergenic | 35.0% | |
| TAATACTCCACTAAGTCTCT+TGG | - | chr2_1:11345067-11345086 | None:intergenic | 35.0% | |
| !!! | AGGGACAATTTTTTCCCAAA+AGG | + | chr2_1:11345150-11345169 | Msa0194890:intron | 35.0% |
| !! | CCCAAAAGGTGCTTATAAAA+AGG | + | chr2_1:11345164-11345183 | Msa0194890:intron | 35.0% |
| ! | CCCTTTTTATAAGCACCTTT+TGG | - | chr2_1:11345168-11345187 | None:intergenic | 35.0% |
| ! | TGGGTATCAAAAGCATACAT+CGG | - | chr2_1:11345363-11345382 | None:intergenic | 35.0% |
| ACCTTGTTCAGAAAATTCCT+GGG | - | chr2_1:11345382-11345401 | None:intergenic | 35.0% | |
| ! | TTTTCTGAACAAGGTCATGA+TGG | + | chr2_1:11345387-11345406 | Msa0194890:CDS | 35.0% |
| ! | TGTTCACTGTTTCTTGAGTA+TGG | - | chr2_1:11345593-11345612 | None:intergenic | 35.0% |
| TACTCAAGAAACAGTGAACA+TGG | + | chr2_1:11345593-11345612 | Msa0194890:intron | 35.0% | |
| ACTCAAGAAACAGTGAACAT+GGG | + | chr2_1:11345594-11345613 | Msa0194890:intron | 35.0% | |
| TGTCTTACAGATATCGTGAA+TGG | + | chr2_1:11345667-11345686 | Msa0194890:intron | 35.0% | |
| GTCTTACAGATATCGTGAAT+GGG | + | chr2_1:11345668-11345687 | Msa0194890:intron | 35.0% | |
| TCTTACAGATATCGTGAATG+GGG | + | chr2_1:11345669-11345688 | Msa0194890:intron | 35.0% | |
| AAGTACACAAAGATTGGTAC+TGG | + | chr2_1:11345717-11345736 | Msa0194890:CDS | 35.0% | |
| !! | ATTTTATCTCTTCTAGGAGG+AGG | - | chr2_1:11345777-11345796 | None:intergenic | 35.0% |
| TCCTCCTAGAAGAGATAAAA+TGG | + | chr2_1:11345776-11345795 | Msa0194890:CDS | 35.0% | |
| ! | TCCATTTTATCTCTTCTAGG+AGG | - | chr2_1:11345780-11345799 | None:intergenic | 35.0% |
| ! | GTCTCCATTTTATCTCTTCT+AGG | - | chr2_1:11345783-11345802 | None:intergenic | 35.0% |
| !!! | GTCAACATCTTTTCTGGAGT+AGG | - | chr2_1:11339671-11339690 | None:intergenic | 40.0% |
| CAACCTTGAAGAAAGAACGA+GGG | - | chr2_1:11339714-11339733 | None:intergenic | 40.0% | |
| GGGTTTAAATTCCGTGTCTT+TGG | + | chr2_1:11340108-11340127 | Msa0194890:intron | 40.0% | |
| TTAGTATTTGTAGCTGCGTG+TGG | + | chr2_1:11340189-11340208 | Msa0194890:intron | 40.0% | |
| TAGTATTTGTAGCTGCGTGT+GGG | + | chr2_1:11340190-11340209 | Msa0194890:intron | 40.0% | |
| TCAACTTAACTAGTAGCCTC+GGG | + | chr2_1:11340378-11340397 | Msa0194890:intron | 40.0% | |
| !! | AACACTCGAATTTTAACCCG+AGG | - | chr2_1:11340397-11340416 | None:intergenic | 40.0% |
| TCGGGTTAAAATTCGAGTGT+TGG | + | chr2_1:11340396-11340415 | Msa0194890:intron | 40.0% | |
| ! | CACCAGATTTAAAACTCCCT+GGG | + | chr2_1:11340423-11340442 | Msa0194890:intron | 40.0% |
| !!! | AACCCAGGGAGTTTTAAATC+TGG | - | chr2_1:11340428-11340447 | None:intergenic | 40.0% |
| AAAAAGGCCCATTAGTCGTT+CGG | - | chr2_1:11340533-11340552 | None:intergenic | 40.0% | |
| TGACACAAGGCATAAGCATT+CGG | - | chr2_1:11340587-11340606 | None:intergenic | 40.0% | |
| GATTGTATTAGCTGCAGTAC+TGG | + | chr2_1:11340755-11340774 | Msa0194890:CDS | 40.0% | |
| GGGCTACAAAAAATATGCCA+TGG | + | chr2_1:11341084-11341103 | Msa0194890:CDS | 40.0% | |
| CATAAGCTCATCATAACCCA+TGG | - | chr2_1:11341104-11341123 | None:intergenic | 40.0% | |
| ! | CGAAACTACAATACGGGTTT+TGG | + | chr2_1:11341294-11341313 | Msa0194890:CDS | 40.0% |
| AGTGCATATCATCTAAGTGG+CGG | + | chr2_1:11341328-11341347 | Msa0194890:CDS | 40.0% | |
| AAATGGAATAGGAGTTGGAC+TGG | - | chr2_1:11341452-11341471 | None:intergenic | 40.0% | |
| TGCAGAACAACGTCACTAAA+TGG | - | chr2_1:11341469-11341488 | None:intergenic | 40.0% | |
| TTTGGAGGCAATGAAAGTCA+TGG | + | chr2_1:11341600-11341619 | Msa0194890:CDS | 40.0% | |
| GCACATAAAGACTCTTCCAA+AGG | + | chr2_1:11341624-11341643 | Msa0194890:CDS | 40.0% | |
| AAGACTCTTCCAAAGGTTGA+AGG | + | chr2_1:11341631-11341650 | Msa0194890:CDS | 40.0% | |
| CACTAAACTGTCCAGAATCA+GGG | - | chr2_1:11341889-11341908 | None:intergenic | 40.0% | |
| AATATTAGACTGGGATCTCG+TGG | + | chr2_1:11341914-11341933 | Msa0194890:CDS | 40.0% | |
| AGGAAGCAATGAATGGTGTT+AGG | + | chr2_1:11342026-11342045 | Msa0194890:CDS | 40.0% | |
| TTTGTTGGAGAATTGCCTTC+TGG | + | chr2_1:11342088-11342107 | Msa0194890:CDS | 40.0% | |
| GAATTGCCTTCTGGATCAAA+TGG | + | chr2_1:11342097-11342116 | Msa0194890:CDS | 40.0% | |
| AAACCACCATTTGATCCAGA+AGG | - | chr2_1:11342106-11342125 | None:intergenic | 40.0% | |
| ! | CCTACCAGATGATCCATTTT+TGG | - | chr2_1:11342133-11342152 | None:intergenic | 40.0% |
| CCAAAAATGGATCATCTGGT+AGG | + | chr2_1:11342130-11342149 | Msa0194890:intron | 40.0% | |
| AGCAAAGGGAGGTTACATTA+AGG | + | chr2_1:11342449-11342468 | Msa0194890:intron | 40.0% | |
| GCAAAGGGAGGTTACATTAA+GGG | + | chr2_1:11342450-11342469 | Msa0194890:intron | 40.0% | |
| GTGTTTAGTCCCTGCAAATA+GGG | + | chr2_1:11342509-11342528 | Msa0194890:intron | 40.0% | |
| TGTTTAGTCCCTGCAAATAG+GGG | + | chr2_1:11342510-11342529 | Msa0194890:intron | 40.0% | |
| GTCCTTGTATTCGTTAATCC+TGG | + | chr2_1:11342547-11342566 | Msa0194890:intron | 40.0% | |
| TGCCAGGATTAACGAATACA+AGG | - | chr2_1:11342552-11342571 | None:intergenic | 40.0% | |
| !! | TGATGTGGCACTGATTAACT+GGG | - | chr2_1:11342620-11342639 | None:intergenic | 40.0% |
| ACATCAGCTAATCAGTGATG+TGG | - | chr2_1:11342635-11342654 | None:intergenic | 40.0% | |
| AAAGGAAGAAGATGAAGCCA+GGG | - | chr2_1:11342681-11342700 | None:intergenic | 40.0% | |
| AAAAGGAAGAAGATGAAGCC+AGG | - | chr2_1:11342682-11342701 | None:intergenic | 40.0% | |
| GAATTTGCAAGGAAAGGAGA+GGG | - | chr2_1:11342705-11342724 | None:intergenic | 40.0% | |
| TGAATTTGCAAGGAAAGGAG+AGG | - | chr2_1:11342706-11342725 | None:intergenic | 40.0% | |
| CTATGGTAAAGTTGTGTTGC+TGG | - | chr2_1:11342754-11342773 | None:intergenic | 40.0% | |
| GTGATGTGTGTCTAATGGAA+AGG | - | chr2_1:11342837-11342856 | None:intergenic | 40.0% | |
| GGAAAGCTACAAATCAGAAG+AGG | + | chr2_1:11342903-11342922 | Msa0194890:intron | 40.0% | |
| ! | GGAGGGAAAGCTAAAGTTTT+GGG | - | chr2_1:11343200-11343219 | None:intergenic | 40.0% |
| ! | TGGAGGGAAAGCTAAAGTTT+TGG | - | chr2_1:11343201-11343220 | None:intergenic | 40.0% |
| !! | AATAGTGTCGACAGTAACAG+AGG | - | chr2_1:11343393-11343412 | None:intergenic | 40.0% |
| AAAGAGAGAGAGAAGAGAGA+AGG | - | chr2_1:11343444-11343463 | None:intergenic | 40.0% | |
| ! | CTCTCTTCTCTCTCTCTTTT+CGG | + | chr2_1:11343445-11343464 | Msa0194890:intron | 40.0% |
| ! | TCTGTGCTTGTGTTGTTGTT+GGG | + | chr2_1:11343570-11343589 | Msa0194890:intron | 40.0% |
| ! | TGAGTTGGCAGTGATTAAGT+TGG | + | chr2_1:11343684-11343703 | Msa0194890:intron | 40.0% |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | + | chr2_1:11343691-11343710 | Msa0194890:intron | 40.0% |
| ! | ATGTGATACTGTGATTGGTC+CGG | + | chr2_1:11344048-11344067 | Msa0194890:intron | 40.0% |
| TGGAGAGATAAAAATGAGGG+CGG | - | chr2_1:11344189-11344208 | None:intergenic | 40.0% | |
| ! | TTATCTGGAACTCTTGCACT+TGG | + | chr2_1:11344599-11344618 | Msa0194890:intron | 40.0% |
| CCATAGCTCGTTTCTTTGTA+AGG | - | chr2_1:11344637-11344656 | None:intergenic | 40.0% | |
| CCTTACAAAGAAACGAGCTA+TGG | + | chr2_1:11344634-11344653 | Msa0194890:CDS | 40.0% | |
| ATGTACTCAGTGACTTCAAC+TGG | + | chr2_1:11344731-11344750 | Msa0194890:intron | 40.0% | |
| GGGGCTTATAAAAAAAGGAC+AGG | - | chr2_1:11344836-11344855 | None:intergenic | 40.0% | |
| TCTTGGAATAGGAGAAGTTG+AGG | - | chr2_1:11345050-11345069 | None:intergenic | 40.0% | |
| TCCTATTCCAAGAGACTTAG+TGG | + | chr2_1:11345057-11345076 | Msa0194890:intron | 40.0% | |
| TCCACTAAGTCTCTTGGAAT+AGG | - | chr2_1:11345061-11345080 | None:intergenic | 40.0% | |
| !! | CAAGAAGCATCGTAGAAAAG+AGG | - | chr2_1:11345250-11345269 | None:intergenic | 40.0% |
| ! | GTATCAAAAGCATACATCGG+AGG | - | chr2_1:11345360-11345379 | None:intergenic | 40.0% |
| ! | GATGTATGCTTTTGATACCC+AGG | + | chr2_1:11345362-11345381 | Msa0194890:CDS | 40.0% |
| ! | ACCCAGGAATTTTCTGAACA+AGG | + | chr2_1:11345378-11345397 | Msa0194890:CDS | 40.0% |
| GACCTTGTTCAGAAAATTCC+TGG | - | chr2_1:11345383-11345402 | None:intergenic | 40.0% | |
| AAGAGATTATGACGATCAGC+AGG | - | chr2_1:11345456-11345475 | None:intergenic | 40.0% | |
| ! | TCACTGTTTCTTGAGTATGG+TGG | - | chr2_1:11345590-11345609 | None:intergenic | 40.0% |
| ! | TACACAAAGATTGGTACTGG+TGG | + | chr2_1:11345720-11345739 | Msa0194890:CDS | 40.0% |
| TACTGGTGGCTATAGTTCTT+TGG | + | chr2_1:11345734-11345753 | Msa0194890:CDS | 40.0% | |
| GATTGGTATAGGATGTGCTT+CGG | - | chr2_1:11345892-11345911 | None:intergenic | 40.0% | |
| GCAACCTTGAAGAAAGAACG+AGG | - | chr2_1:11339715-11339734 | None:intergenic | 45.0% | |
| CTAATTTCTCGAGCTGCAAC+TGG | - | chr2_1:11340173-11340192 | None:intergenic | 45.0% | |
| AGTATTTGTAGCTGCGTGTG+GGG | + | chr2_1:11340191-11340210 | Msa0194890:intron | 45.0% | |
| ! | GCACCAGATTTAAAACTCCC+TGG | + | chr2_1:11340422-11340441 | Msa0194890:intron | 45.0% |
| CAAGAAGGGAAGCGACAAAA+AGG | - | chr2_1:11340549-11340568 | None:intergenic | 45.0% | |
| ACAATCACGCTTTCGGTTAC+TGG | - | chr2_1:11340741-11340760 | None:intergenic | 45.0% | |
| AAACTACACGAGCTGGACTT+GGG | - | chr2_1:11340838-11340857 | None:intergenic | 45.0% | |
| AACAGCAGTAATAGTGGTGC+TGG | + | chr2_1:11340899-11340918 | Msa0194890:CDS | 45.0% | |
| GGTAATTGAGGAGGAAGTCT+TGG | - | chr2_1:11340953-11340972 | None:intergenic | 45.0% | |
| GTATCAGGTGGTAATTGAGG+AGG | - | chr2_1:11340962-11340981 | None:intergenic | 45.0% | |
| GATTTGTCGTCTAGTGTTGC+AGG | - | chr2_1:11341010-11341029 | None:intergenic | 45.0% | |
| CACTAGACGACAAATCGTTG+TGG | + | chr2_1:11341014-11341033 | Msa0194890:CDS | 45.0% | |
| ! | AGGAAGCTTTTACTCATGCG+TGG | + | chr2_1:11341059-11341078 | Msa0194890:CDS | 45.0% |
| ! | AGCTTTTACTCATGCGTGGT+CGG | + | chr2_1:11341063-11341082 | Msa0194890:CDS | 45.0% |
| CTTATGCCAGTTAGCCAACA+TGG | + | chr2_1:11341118-11341137 | Msa0194890:CDS | 45.0% | |
| ! | TCAGTTCCATGTTGGCTAAC+TGG | - | chr2_1:11341127-11341146 | None:intergenic | 45.0% |
| GTTAGCCAACATGGAACTGA+CGG | + | chr2_1:11341127-11341146 | Msa0194890:CDS | 45.0% | |
| TTAGCCAACATGGAACTGAC+GGG | + | chr2_1:11341128-11341147 | Msa0194890:CDS | 45.0% | |
| TGATGAAGTTGTTGCCGAAG+CGG | + | chr2_1:11341210-11341229 | Msa0194890:CDS | 45.0% | |
| !!! | ACTACAATACGGGTTTTGGG+AGG | + | chr2_1:11341298-11341317 | Msa0194890:CDS | 45.0% |
| !!! | CTACAATACGGGTTTTGGGA+GGG | + | chr2_1:11341299-11341318 | Msa0194890:CDS | 45.0% |
| GTGCATATCATCTAAGTGGC+GGG | + | chr2_1:11341329-11341348 | Msa0194890:CDS | 45.0% | |
| TGCATATCATCTAAGTGGCG+GGG | + | chr2_1:11341330-11341349 | Msa0194890:CDS | 45.0% | |
| GGAACGAACATAACTCATGC+AGG | + | chr2_1:11341358-11341377 | Msa0194890:CDS | 45.0% | |
| ATTGAACTCGAGCTGCAATG+TGG | - | chr2_1:11341545-11341564 | None:intergenic | 45.0% | |
| GGAACTAGTCCTTCAACCTT+TGG | - | chr2_1:11341643-11341662 | None:intergenic | 45.0% | |
| !! | TTTTTAGTCGCTTTCAGGCG+TGG | + | chr2_1:11341799-11341818 | Msa0194890:intron | 45.0% |
| ACTAATTGCAGCCCTGATTC+TGG | + | chr2_1:11341875-11341894 | Msa0194890:intron | 45.0% | |
| CCACTAAACTGTCCAGAATC+AGG | - | chr2_1:11341890-11341909 | None:intergenic | 45.0% | |
| CCTGATTCTGGACAGTTTAG+TGG | + | chr2_1:11341887-11341906 | Msa0194890:CDS | 45.0% | |
| CTCAAAGTATGGCTTCAGAG+TGG | + | chr2_1:11341959-11341978 | Msa0194890:CDS | 45.0% | |
| TTGCCTTCTGGATCAAATGG+TGG | + | chr2_1:11342100-11342119 | Msa0194890:CDS | 45.0% | |
| TGGTGGTTTCAGCCCAAAAA+TGG | + | chr2_1:11342117-11342136 | Msa0194890:intron | 45.0% | |
| CAGCCCAAAAATGGATCATC+TGG | + | chr2_1:11342126-11342145 | Msa0194890:intron | 45.0% | |
| TGGTTAGATATAGGGACGGA+GGG | - | chr2_1:11342204-11342223 | None:intergenic | 45.0% | |
| TGGGTGGTTAGATATAGGGA+CGG | - | chr2_1:11342208-11342227 | None:intergenic | 45.0% | |
| AGGGAGGTTACATTAAGGGA+CGG | + | chr2_1:11342454-11342473 | Msa0194890:intron | 45.0% | |
| AGGTTACATTAAGGGACGGA+GGG | + | chr2_1:11342458-11342477 | Msa0194890:intron | 45.0% | |
| CGTGTTTAGTCCCTGCAAAT+AGG | + | chr2_1:11342508-11342527 | Msa0194890:intron | 45.0% | |
| !! | GCACTGATTAACTGGGTTGA+AGG | - | chr2_1:11342613-11342632 | None:intergenic | 45.0% |
| !! | GTGATGTGGCACTGATTAAC+TGG | - | chr2_1:11342621-11342640 | None:intergenic | 45.0% |
| !!! | AGATGAAGCCAGGGGTATTT+TGG | - | chr2_1:11342672-11342691 | None:intergenic | 45.0% |
| AAGGAAGAAGATGAAGCCAG+GGG | - | chr2_1:11342680-11342699 | None:intergenic | 45.0% | |
| GCAGGTGAATTTGCAAGGAA+AGG | - | chr2_1:11342711-11342730 | None:intergenic | 45.0% | |
| GAGTTGCAGGTGAATTTGCA+AGG | - | chr2_1:11342716-11342735 | None:intergenic | 45.0% | |
| TGTTGCTGGGAGAAGAACAA+GGG | - | chr2_1:11342740-11342759 | None:intergenic | 45.0% | |
| GTGGAGTGATGTGTGTCTAA+TGG | - | chr2_1:11342842-11342861 | None:intergenic | 45.0% | |
| GGTTTGACTCTCATCAAGTG+TGG | - | chr2_1:11342988-11343007 | None:intergenic | 45.0% | |
| ! | AACAGTGCTATTGGTGTGAG+TGG | - | chr2_1:11343119-11343138 | None:intergenic | 45.0% |
| !! | AACTTTAGCTTTCCCTCCAC+CGG | + | chr2_1:11343202-11343221 | Msa0194890:intron | 45.0% |
| TCAGAGCAACAAACGCAACA+AGG | - | chr2_1:11343277-11343296 | None:intergenic | 45.0% | |
| TCGGAATAACCCAATATGGC+AGG | - | chr2_1:11343323-11343342 | None:intergenic | 45.0% | |
| TCGGTCGGAATAACCCAATA+TGG | - | chr2_1:11343327-11343346 | None:intergenic | 45.0% | |
| ! | CTCTGTGCTTGTGTTGTTGT+TGG | + | chr2_1:11343569-11343588 | Msa0194890:intron | 45.0% |
| ! | TTGTGTTGTTGTTGGGAGAG+AGG | + | chr2_1:11343577-11343596 | Msa0194890:intron | 45.0% |
| ACTTGACTGCTCATCCATCT+AGG | - | chr2_1:11343628-11343647 | None:intergenic | 45.0% | |
| CAATGCAAGGGTAAATTGCC+AGG | + | chr2_1:11343735-11343754 | Msa0194890:intron | 45.0% | |
| ! | TTGCCAGGATTAGCGATTAC+AGG | + | chr2_1:11343750-11343769 | Msa0194890:intron | 45.0% |
| ! | TGCCAGGATTAGCGATTACA+GGG | + | chr2_1:11343751-11343770 | Msa0194890:intron | 45.0% |
| GAGTTTCAGATGAAAGAGGG+AGG | - | chr2_1:11344524-11344543 | None:intergenic | 45.0% | |
| AGTAAGCAATTTCAGGAGCC+AGG | - | chr2_1:11344757-11344776 | None:intergenic | 45.0% | |
| TCTGAACAAGGTCATGATGG+AGG | + | chr2_1:11345390-11345409 | Msa0194890:CDS | 45.0% | |
| AAGAATGACTCCACAGTCTC+AGG | - | chr2_1:11345483-11345502 | None:intergenic | 45.0% | |
| ACAGATATCGTGAATGGGGT+TGG | + | chr2_1:11345673-11345692 | Msa0194890:intron | 45.0% | |
| GGATAGCTCCCATATTCCAT+TGG | + | chr2_1:11345848-11345867 | Msa0194890:CDS | 45.0% | |
| GGTAGAGACTTGGACATAGC+TGG | - | chr2_1:11339649-11339668 | None:intergenic | 50.0% | |
| ! | TCTGGAGTAGGGTAGAGACT+TGG | - | chr2_1:11339659-11339678 | None:intergenic | 50.0% |
| GAAAGAACGAGGGCGAAACT+TGG | - | chr2_1:11339704-11339723 | None:intergenic | 50.0% | |
| TCGCCCTCGTTCTTTCTTCA+AGG | + | chr2_1:11339708-11339727 | Msa0194890:CDS | 50.0% | |
| !! | TCCGTGTCTTTGGAATGCAC+CGG | + | chr2_1:11340118-11340137 | Msa0194890:intron | 50.0% |
| TTCTCGAGCTGCAACTGGAT+AGG | - | chr2_1:11340168-11340187 | None:intergenic | 50.0% | |
| TACCACCACCGAACGACTAA+TGG | + | chr2_1:11340522-11340541 | Msa0194890:intron | 50.0% | |
| ACCACCACCGAACGACTAAT+GGG | + | chr2_1:11340523-11340542 | Msa0194890:intron | 50.0% | |
| TTGGGCTATGTGTCAGCACA+AGG | - | chr2_1:11340820-11340839 | None:intergenic | 50.0% | |
| GAAACTACACGAGCTGGACT+TGG | - | chr2_1:11340839-11340858 | None:intergenic | 50.0% | |
| TCTCGAGAAACTACACGAGC+TGG | - | chr2_1:11340845-11340864 | None:intergenic | 50.0% | |
| CGTCTAGTGTTGCAGGTACA+TGG | - | chr2_1:11341003-11341022 | None:intergenic | 50.0% | |
| ! | GCTTTTACTCATGCGTGGTC+GGG | + | chr2_1:11341064-11341083 | Msa0194890:CDS | 50.0% |
| !! | CAACATGGAACTGACGGGTT+GGG | + | chr2_1:11341133-11341152 | Msa0194890:CDS | 50.0% |
| !! | AACATGGAACTGACGGGTTG+GGG | + | chr2_1:11341134-11341153 | Msa0194890:CDS | 50.0% |
| GATGAAGTTGTTGCCGAAGC+GGG | + | chr2_1:11341211-11341230 | Msa0194890:CDS | 50.0% | |
| GTGGTTAGATATAGGGACGG+AGG | - | chr2_1:11342205-11342224 | None:intergenic | 50.0% | |
| GAGGTTACATTAAGGGACGG+AGG | + | chr2_1:11342457-11342476 | Msa0194890:intron | 50.0% | |
| TTTGGGAGGGCAAAATTGCC+AGG | - | chr2_1:11342568-11342587 | None:intergenic | 50.0% | |
| CGGAAAGACCAAAATACCCC+TGG | + | chr2_1:11342661-11342680 | Msa0194890:intron | 50.0% | |
| GCAAGGAAAGGAGAGGGAAA+AGG | - | chr2_1:11342699-11342718 | None:intergenic | 50.0% | |
| TTGCTGGGAGAAGAACAAGG+GGG | - | chr2_1:11342738-11342757 | None:intergenic | 50.0% | |
| GTTGCTGGGAGAAGAACAAG+GGG | - | chr2_1:11342739-11342758 | None:intergenic | 50.0% | |
| ! | GTGTTGCTGGGAGAAGAACA+AGG | - | chr2_1:11342741-11342760 | None:intergenic | 50.0% |
| GTTAACCGCGGTGGTGAAAA+CGG | - | chr2_1:11343086-11343105 | None:intergenic | 50.0% | |
| ! | GTTTTCACCACCGCGGTTAA+CGG | + | chr2_1:11343085-11343104 | Msa0194890:intron | 50.0% |
| ! | AGTGCTATTGGTGTGAGTGG+CGG | - | chr2_1:11343116-11343135 | None:intergenic | 50.0% |
| TGAAGAAAGTCGCCAGAGCA+AGG | - | chr2_1:11343234-11343253 | None:intergenic | 50.0% | |
| !!! | CTGAGTTTTTTCCACCACCG+CGG | + | chr2_1:11343293-11343312 | Msa0194890:intron | 50.0% |
| !! | AGTGTCGACAGTAACAGAGG+AGG | - | chr2_1:11343390-11343409 | None:intergenic | 50.0% |
| CTCTCTTCTCTCTATCTCGC+CGG | + | chr2_1:11343476-11343495 | Msa0194890:intron | 50.0% | |
| GGAAAGGGCGAAAGAGGAAA+GGG | - | chr2_1:11343513-11343532 | None:intergenic | 50.0% | |
| AGGAAAGGGCGAAAGAGGAA+AGG | - | chr2_1:11343514-11343533 | None:intergenic | 50.0% | |
| AAGGAAGGAAAGGGCGAAAG+AGG | - | chr2_1:11343519-11343538 | None:intergenic | 50.0% | |
| ! | TGTTGTTGTTGGGAGAGAGG+AGG | + | chr2_1:11343580-11343599 | Msa0194890:intron | 50.0% |
| ! | GTTGTTGTTGGGAGAGAGGA+GGG | + | chr2_1:11343581-11343600 | Msa0194890:intron | 50.0% |
| ! | TTGTTGTTGGGAGAGAGGAG+GGG | + | chr2_1:11343582-11343601 | Msa0194890:intron | 50.0% |
| TGTCCATTCCCATGCCTAGA+TGG | + | chr2_1:11343611-11343630 | Msa0194890:intron | 50.0% | |
| CATCCATCTAGGCATGGGAA+TGG | - | chr2_1:11343617-11343636 | None:intergenic | 50.0% | |
| CTGCTCATCCATCTAGGCAT+GGG | - | chr2_1:11343622-11343641 | None:intergenic | 50.0% | |
| ACTGCTCATCCATCTAGGCA+TGG | - | chr2_1:11343623-11343642 | None:intergenic | 50.0% | |
| GTCCCTGTAATCGCTAATCC+TGG | - | chr2_1:11343756-11343775 | None:intergenic | 50.0% | |
| !! | CTTGCACTTGGTGCCACTAA+AGG | + | chr2_1:11344611-11344630 | Msa0194890:intron | 50.0% |
| TCTCTTGAGACCTGAGACTG+TGG | + | chr2_1:11345470-11345489 | Msa0194890:CDS | 50.0% | |
| ! | CGCTTTTGCGACAGCTATGC+AGG | - | chr2_1:11340036-11340055 | None:intergenic | 55.0% |
| CCCGGTGCATTCCAAAGACA+CGG | - | chr2_1:11340122-11340141 | None:intergenic | 55.0% | |
| !! | CCGTGTCTTTGGAATGCACC+GGG | + | chr2_1:11340119-11340138 | Msa0194890:intron | 55.0% |
| !! | CGTGTCTTTGGAATGCACCG+GGG | + | chr2_1:11340120-11340139 | Msa0194890:intron | 55.0% |
| AAGGCCCATTAGTCGTTCGG+TGG | - | chr2_1:11340530-11340549 | None:intergenic | 55.0% | |
| CACGCTTTCGGTTACTGGTG+AGG | - | chr2_1:11340736-11340755 | None:intergenic | 55.0% | |
| CCAACCCGTCAGTTCCATGT+TGG | - | chr2_1:11341135-11341154 | None:intergenic | 55.0% | |
| ! | CCAACATGGAACTGACGGGT+TGG | + | chr2_1:11341132-11341151 | Msa0194890:CDS | 55.0% |
| !! | ACATGGAACTGACGGGTTGG+GGG | + | chr2_1:11341135-11341154 | Msa0194890:CDS | 55.0% |
| GTTGGGGGGATTAGGTGCTA+CGG | + | chr2_1:11341150-11341169 | Msa0194890:CDS | 55.0% | |
| ! | GGGATTAGGTGCTACGGTAG+TGG | + | chr2_1:11341156-11341175 | Msa0194890:CDS | 55.0% |
| TTCAACCCACGATCCCGCTT+CGG | - | chr2_1:11341227-11341246 | None:intergenic | 55.0% | |
| ! | CATCTAAGTGGCGGGGAACA+AGG | + | chr2_1:11341337-11341356 | Msa0194890:CDS | 55.0% |
| GAAGAACAAGGGGGAGTTGC+AGG | - | chr2_1:11342729-11342748 | None:intergenic | 55.0% | |
| GTGGTCGTGAGTGAAGTGTG+TGG | - | chr2_1:11343064-11343083 | None:intergenic | 55.0% | |
| GCAAGGTAGTTTCCGGTGGA+GGG | - | chr2_1:11343217-11343236 | None:intergenic | 55.0% | |
| AGCAAGGTAGTTTCCGGTGG+AGG | - | chr2_1:11343218-11343237 | None:intergenic | 55.0% | |
| CAGAGCAAGGTAGTTTCCGG+TGG | - | chr2_1:11343221-11343240 | None:intergenic | 55.0% | |
| CACCGGAAACTACCTTGCTC+TGG | + | chr2_1:11343219-11343238 | Msa0194890:intron | 55.0% | |
| CGCCAGAGCAAGGTAGTTTC+CGG | - | chr2_1:11343224-11343243 | None:intergenic | 55.0% | |
| ATTCCGACCGACATGAACGC+CGG | + | chr2_1:11343336-11343355 | Msa0194890:intron | 55.0% | |
| GAAAGAGGAAAGGGAAGGGG+CGG | - | chr2_1:11343504-11343523 | None:intergenic | 55.0% | |
| GGCGAAAGAGGAAAGGGAAG+GGG | - | chr2_1:11343507-11343526 | None:intergenic | 55.0% | |
| GGGCGAAAGAGGAAAGGGAA+GGG | - | chr2_1:11343508-11343527 | None:intergenic | 55.0% | |
| AGGGCGAAAGAGGAAAGGGA+AGG | - | chr2_1:11343509-11343528 | None:intergenic | 55.0% | |
| CTCAGTGACTTCAACTGGCC+TGG | + | chr2_1:11344736-11344755 | Msa0194890:intron | 55.0% | |
| ! | GCCCATTAGTCGTTCGGTGG+TGG | - | chr2_1:11340527-11340546 | None:intergenic | 60.0% |
| !! | CATGGAACTGACGGGTTGGG+GGG | + | chr2_1:11341136-11341155 | Msa0194890:CDS | 60.0% |
| !! | ACTGACGGGTTGGGGGGATT+AGG | + | chr2_1:11341142-11341161 | Msa0194890:CDS | 60.0% |
| TTGTTGCCGAAGCGGGATCG+TGG | + | chr2_1:11341218-11341237 | Msa0194890:CDS | 60.0% | |
| TGTTGCCGAAGCGGGATCGT+GGG | + | chr2_1:11341219-11341238 | Msa0194890:CDS | 60.0% | |
| TCGTCAGCGCATAACGCTCC+TGG | + | chr2_1:11341493-11341512 | Msa0194890:CDS | 60.0% | |
| TCAGCGCATAACGCTCCTGG+TGG | + | chr2_1:11341496-11341515 | Msa0194890:CDS | 60.0% | |
| ! | GACGTGCTACTCAGTCCACC+AGG | - | chr2_1:11341514-11341533 | None:intergenic | 60.0% |
| ! | GACCACCGTTTTCACCACCG+CGG | + | chr2_1:11343078-11343097 | Msa0194890:intron | 60.0% |
| AACCGCGGTGGTGAAAACGG+TGG | - | chr2_1:11343083-11343102 | None:intergenic | 60.0% | |
| TTCACCACCGCGGTTAACGG+CGG | + | chr2_1:11343088-11343107 | Msa0194890:intron | 60.0% | |
| CCAATATGGCAGGTTCGCCG+CGG | - | chr2_1:11343313-11343332 | None:intergenic | 60.0% | |
| CGCGGCGAACCTGCCATATT+GGG | + | chr2_1:11343311-11343330 | Msa0194890:intron | 60.0% | |
| ACCGCCATGGGAGAGAGGTT+GGG | - | chr2_1:11343362-11343381 | None:intergenic | 60.0% | |
| ATATGGCAGGTTCGCCGCGG+TGG | - | chr2_1:11343310-11343329 | None:intergenic | 65.0% | |
| CCGCGGCGAACCTGCCATAT+TGG | + | chr2_1:11343310-11343329 | Msa0194890:intron | 65.0% | |
| GGTTGGGCCGGCGTTCATGT+CGG | - | chr2_1:11343346-11343365 | None:intergenic | 65.0% | |
| CCATGGGAGAGAGGTTGGGC+CGG | - | chr2_1:11343358-11343377 | None:intergenic | 65.0% | |
| GCCCAACCTCTCTCCCATGG+CGG | + | chr2_1:11343358-11343377 | Msa0194890:intron | 65.0% | |
| CACCGCCATGGGAGAGAGGT+TGG | - | chr2_1:11343363-11343382 | None:intergenic | 65.0% | |
| CAACCTCTCTCCCATGGCGG+TGG | + | chr2_1:11343361-11343380 | Msa0194890:intron | 65.0% | |
| GGGCCGGCGTTCATGTCGGT+CGG | - | chr2_1:11343342-11343361 | None:intergenic | 70.0% | |
| CCGGCCCAACCTCTCTCCCA+TGG | + | chr2_1:11343355-11343374 | Msa0194890:intron | 70.0% | |
| TGGCAGGTTCGCCGCGGTGG+TGG | - | chr2_1:11343307-11343326 | None:intergenic | 75.0% | |
| GGAAAGGGAAGGGGCGGCGC+CGG | - | chr2_1:11343498-11343517 | None:intergenic | 75.0% | |
| ! | GGCGCCGCCGTTAACCGCGG+TGG | - | chr2_1:11343095-11343114 | None:intergenic | 80.0% |
| ! | GGCGGCGCCGCCGTTAACCG+CGG | - | chr2_1:11343098-11343117 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 11339386 | 11345926 | 11339386 | ID=Msa0194890;Name=Msa0194890 |
| chr2_1 | mRNA | 11339386 | 11345926 | 11339386 | ID=Msa0194890-mRNA-1;Parent=Msa0194890;Name=Msa0194890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.85|0.5|0.71|7|0|604 |
| chr2_1 | exon | 11339386 | 11339392 | 11339386 | ID=Msa0194890-mRNA-1:exon:5024;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11339650 | 11339729 | 11339650 | ID=Msa0194890-mRNA-1:exon:5025;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11340716 | 11341674 | 11340716 | ID=Msa0194890-mRNA-1:exon:5026;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11341886 | 11342121 | 11341886 | ID=Msa0194890-mRNA-1:exon:5027;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11344633 | 11344739 | 11344633 | ID=Msa0194890-mRNA-1:exon:5028;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11345357 | 11345532 | 11345357 | ID=Msa0194890-mRNA-1:exon:5029;Parent=Msa0194890-mRNA-1 |
| chr2_1 | exon | 11345677 | 11345926 | 11345677 | ID=Msa0194890-mRNA-1:exon:5030;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11339386 | 11339392 | 11339386 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11339650 | 11339729 | 11339650 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11340716 | 11341674 | 11340716 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11341886 | 11342121 | 11341886 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11344633 | 11344739 | 11344633 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11345357 | 11345532 | 11345357 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| chr2_1 | CDS | 11345677 | 11345926 | 11345677 | ID=Msa0194890-mRNA-1:cds;Parent=Msa0194890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
