AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0982670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982670 MtrunA17_Chr8g0386921 96.040 606 19 1 1 601 1 606 0.0 1202
Msa0982670 MtrunA17_Chr1g0185621 55.978 184 72 3 4 182 12 191 2.29e-61 215
Msa0982670 MtrunA17_Chr1g0185621 31.690 284 151 8 302 564 359 620 4.48e-23 103
Msa0982670 MtrunA17_Chr5g0411341 34.104 173 94 6 19 181 60 222 3.36e-22 101
Msa0982670 MtrunA17_Chr5g0411331 33.684 190 107 7 4 184 29 208 9.30e-22 95.1
Msa0982670 MtrunA17_Chr8g0366751 28.906 256 140 12 19 253 69 303 2.72e-17 85.5
Msa0982670 MtrunA17_Chr8g0366751 47.541 61 32 0 397 457 458 518 9.96e-11 64.7
Msa0982670 MtrunA17_Chr7g0225901 41.667 84 49 0 382 465 69 152 9.39e-14 71.6
Msa0982670 MtrunA17_Chr3g0131691 33.962 159 83 4 402 557 299 438 5.09e-13 71.6
Msa0982670 MtrunA17_Chr7g0275821 44.048 84 39 1 397 472 248 331 5.28e-13 71.2
Msa0982670 MtrunA17_Chr1g0211081 29.630 189 111 6 381 557 297 475 6.84e-13 71.2
Msa0982670 MtrunA17_Chr5g0400661 25.229 218 125 6 358 560 101 295 1.21e-12 69.3
Msa0982670 MtrunA17_Chr6g0468461 44.776 67 37 0 398 464 170 236 8.80e-12 67.0
Msa0982670 MtrunA17_Chr8g0346161 55.357 56 25 0 400 455 290 345 1.12e-11 67.4
Msa0982670 MtrunA17_Chr6g0468491 37.634 93 54 1 372 464 112 200 1.18e-11 66.2
Msa0982670 MtrunA17_Chr4g0049331 41.791 67 39 0 391 457 125 191 4.88e-11 64.3
Msa0982670 MtrunA17_Chr7g0260841 49.180 61 31 0 397 457 351 411 5.40e-11 65.5
Msa0982670 MtrunA17_Chr8g0346151 48.571 70 31 1 400 469 278 342 5.52e-11 65.1
Msa0982670 MtrunA17_Chr4g0002801 23.415 205 129 3 400 600 151 331 9.59e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982670 AT5G41315.2 43.182 660 277 21 2 598 18 642 1.70e-156 464
Msa0982670 AT5G41315.1 43.293 656 282 20 2 598 10 634 1.79e-156 463
Msa0982670 AT5G41315.3 43.293 656 282 20 2 598 15 639 2.03e-156 463
Msa0982670 AT1G63650.3 42.994 628 284 16 2 598 9 593 9.88e-156 460
Msa0982670 AT1G63650.1 42.994 628 284 16 2 598 9 593 9.88e-156 460
Msa0982670 AT1G63650.2 42.994 628 284 16 2 598 9 593 9.88e-156 460
Msa0982670 AT4G09820.1 29.748 595 304 17 10 597 24 511 8.55e-69 232
Msa0982670 AT4G00480.3 50.505 198 76 4 6 184 23 217 1.70e-54 193
Msa0982670 AT4G00480.3 28.000 275 143 8 308 563 250 488 2.12e-15 79.7
Msa0982670 AT4G00480.1 50.505 198 76 4 6 184 23 217 3.35e-54 193
Msa0982670 AT4G00480.1 28.803 309 164 9 308 597 250 521 3.99e-20 94.7
Msa0982670 AT4G00480.2 50.505 198 76 4 6 184 23 217 1.23e-53 192
Msa0982670 AT4G00480.2 28.803 309 164 9 308 597 250 521 3.32e-20 95.1
Msa0982670 AT1G32640.1 32.948 173 100 5 19 181 83 249 3.07e-20 95.5
Msa0982670 AT4G17880.1 29.609 179 103 5 19 182 78 248 3.55e-18 88.6
Msa0982670 AT4G17880.1 48.387 62 32 0 397 458 412 473 3.56e-11 66.6
Msa0982670 AT1G01260.1 32.812 192 111 6 17 198 64 247 2.64e-17 85.9
Msa0982670 AT1G01260.1 50.746 67 33 0 398 464 430 496 1.42e-12 70.9
Msa0982670 AT1G01260.2 32.812 192 111 6 17 198 64 247 2.64e-17 85.9
Msa0982670 AT1G01260.2 50.746 67 33 0 398 464 430 496 1.42e-12 70.9
Msa0982670 AT1G01260.3 32.812 192 111 6 17 198 64 247 2.64e-17 85.9
Msa0982670 AT1G01260.3 50.746 67 33 0 398 464 430 496 1.42e-12 70.9
Msa0982670 AT2G46510.1 30.000 180 106 5 17 182 64 237 2.54e-16 82.8
Msa0982670 AT2G46510.1 50.820 61 30 0 397 457 391 451 1.03e-11 68.2
Msa0982670 AT5G46830.1 30.939 181 112 5 19 187 49 228 8.19e-15 77.8
Msa0982670 AT5G46760.1 30.460 174 100 5 19 180 67 231 6.92e-14 75.1
Msa0982670 AT5G46760.1 29.448 163 93 3 397 559 411 551 1.22e-12 71.2
Msa0982670 AT4G16430.1 29.381 194 113 8 5 187 49 229 1.22e-13 73.9
Msa0982670 AT4G16430.1 41.758 91 44 1 397 478 316 406 1.33e-11 67.4
Msa0982670 AT3G26744.6 32.716 162 81 6 402 557 308 447 2.43e-13 73.2
Msa0982670 AT3G26744.1 32.716 162 81 6 402 557 308 447 2.80e-13 72.8
Msa0982670 AT3G26744.4 32.716 162 81 6 402 557 308 447 2.80e-13 72.8
Msa0982670 AT3G26744.2 32.716 162 81 6 402 557 308 447 2.80e-13 72.8
Msa0982670 AT1G12860.1 32.919 161 78 5 402 557 268 403 4.54e-13 72.0
Msa0982670 AT1G12860.2 32.919 161 78 5 402 557 268 403 4.73e-13 72.0
Msa0982670 AT4G37850.2 28.125 160 87 3 399 556 150 283 7.50e-13 70.5
Msa0982670 AT4G37850.1 28.125 160 87 3 399 556 150 283 7.50e-13 70.5
Msa0982670 AT2G22760.2 26.452 155 91 3 402 556 120 251 4.02e-12 67.8
Msa0982670 AT2G22760.1 26.452 155 91 3 402 556 120 251 5.44e-12 67.4

Find 118 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTGTCACAACTTTCTT+TGG 0.194766 6_4:+22387234 Msa0982670:five_prime_UTR
AAAACTTTGAAGCCACTTTC+TGG 0.199218 6_4:-22391437 None:intergenic
AGGAAGGATATTAGAAATTA+TGG 0.249790 6_4:+22390919 Msa0982670:CDS
TAGAAAATGGCCAACCAATT+TGG 0.253067 6_4:+22388686 Msa0982670:CDS
TCAGCATCAATTAGCCAAAT+TGG 0.260352 6_4:-22388700 None:intergenic
AATATCCTTCCTGCTTTAGA+AGG 0.272945 6_4:-22390908 None:intergenic
AGATACCGAGTGGTACTATT+TGG 0.275916 6_4:+22388503 Msa0982670:CDS
ATTATGTCATATCCAACTTC+TGG 0.286568 6_4:-22389757 None:intergenic
AATGTAGCTCGAGCGTTAAT+AGG 0.287585 6_4:-22389664 None:intergenic
TAGTCACAAATGAAAATTCT+TGG 0.304530 6_4:+22391539 Msa0982670:three_prime_UTR
AAAGTTATTGAAGAAGATTT+TGG 0.310498 6_4:+22390170 Msa0982670:CDS
AGGTCCCTTGTCTTGGCCTT+TGG 0.323833 6_4:-22390143 None:intergenic
GAACTTAGTTCTGACGAAAT+AGG 0.323945 6_4:+22388372 Msa0982670:CDS
GGTTGAAAGCTGGCAAGTTT+TGG 0.326038 6_4:+22389852 Msa0982670:CDS
GCACTTGTAAATTGGTAGAT+AGG 0.328485 6_4:+22391651 Msa0982670:three_prime_UTR
AATATTACCTTACTATTTGA+AGG 0.331430 6_4:-22390360 None:intergenic
TTGTTTCAGCACTTGTAAAT+TGG 0.338805 6_4:+22391643 Msa0982670:three_prime_UTR
CCAGGAAGAGCTCTAGAAAA+TGG 0.340134 6_4:+22388673 Msa0982670:CDS
CTTCAAAAGGAAGTTCTAAT+AGG 0.340490 6_4:+22390834 Msa0982670:CDS
AATGCATCCCCGTTGTTAAC+TGG 0.347653 6_4:-22390059 None:intergenic
TTTGGAAACAATAACTGATA+TGG 0.348285 6_4:-22387386 None:intergenic
TCATCTAATCATTAAATCTA+AGG 0.350741 6_4:+22391009 Msa0982670:CDS
TAATGCCAATCTTCACTTAG+AGG 0.362258 6_4:-22390000 None:intergenic
CAGCTAATGCAACAACAAAA+AGG 0.368472 6_4:+22391400 Msa0982670:CDS
ATAGATTCATGTCAAATCAT+TGG 0.385491 6_4:-22391703 None:intergenic
TTGCAATCTTCTCCAACCTT+AGG 0.396557 6_4:-22389949 None:intergenic
GTTGAATTAATTCCAGAAGT+TGG 0.399420 6_4:+22389745 Msa0982670:CDS
AATGCATTTGAGCTACCATT+AGG 0.406315 6_4:-22389796 None:intergenic
TGAGAAAATGATAAGAGAGT+TGG 0.409433 6_4:+22390634 Msa0982670:CDS
AGCAATGACCAGTTAACAAC+GGG 0.413039 6_4:+22390051 Msa0982670:CDS
TCAACCATGAATGTTTCATT+TGG 0.414054 6_4:-22389835 None:intergenic
AAATATTTCTTCTGCTCCTA+AGG 0.414742 6_4:+22389933 Msa0982670:CDS
CATGAAGGAGCAACTTGCTT+TGG 0.415492 6_4:+22387580 Msa0982670:CDS
TCTCTGGAATAAATACCTAT+TGG 0.426774 6_4:+22391603 Msa0982670:three_prime_UTR
TGTTTCATTTGGTAGTTGAT+TGG 0.427906 6_4:-22389824 None:intergenic
ACTACCAAATGAAACATTCA+TGG 0.431417 6_4:+22389831 Msa0982670:CDS
ATGTAGCTCGAGCGTTAATA+GGG 0.437263 6_4:-22389663 None:intergenic
ATACCAACCCTCAAACAAAA+AGG 0.440617 6_4:+22388448 Msa0982670:CDS
TTCAATTTAATTTCTCCCAC+TGG 0.443687 6_4:+22391495 Msa0982670:three_prime_UTR
TCGGTATCTGTGAGATCATC+AGG 0.444790 6_4:-22388489 None:intergenic
AATGGAGCTATGTAATATTC+TGG 0.445432 6_4:+22387618 Msa0982670:CDS
AATGGTTCCTTCAAATAGTA+AGG 0.449741 6_4:+22390353 Msa0982670:CDS
ATTTCTTCTGCTCCTAAGGT+TGG 0.458378 6_4:+22389937 Msa0982670:CDS
CTTCTAGACTCTATACCTGT+TGG 0.459759 6_4:-22390671 None:intergenic
CTTGGCCTTTGGAAATTCAC+AGG 0.474066 6_4:-22390132 None:intergenic
AACACAGCAACCTCTCCTAA+TGG 0.474418 6_4:+22389781 Msa0982670:CDS
TATAATAACAAAACTAACAA+TGG 0.477360 6_4:+22390740 Msa0982670:CDS
ATGAAAGGGGTTATTGAGCT+AGG 0.483817 6_4:+22389446 Msa0982670:CDS
TGGCAGTTAGAAGCATTCAA+TGG 0.489433 6_4:+22387600 Msa0982670:CDS
ATAATAACAAAACTAACAAT+GGG 0.493585 6_4:+22390741 Msa0982670:CDS
TGGATCCTCTAAGTGAAGAT+TGG 0.499708 6_4:+22389995 Msa0982670:CDS
GTCCATGTTACATCACCAAT+AGG 0.505991 6_4:-22391618 None:intergenic
TTGTGTGTTCTTAGTTTACC+AGG 0.508462 6_4:+22388655 Msa0982670:intron
TATGCAGTCACTTGAATTCA+CGG 0.508466 6_4:-22389905 None:intergenic
TCTGTTGCATAAGTAGATAA+TGG 0.508707 6_4:+22387547 Msa0982670:exon
GATTCAGATGTTGACTTGAG+AGG 0.508977 6_4:-22387345 None:intergenic
ATGTGTTCAGATGCTTCAAA+AGG 0.516460 6_4:+22390821 Msa0982670:CDS
TCCTTCTTTCTGACAAAACA+TGG 0.517100 6_4:-22390290 None:intergenic
GAGGAAAATTTGTGACATAG+AGG 0.518793 6_4:+22390784 Msa0982670:CDS
AGTTTGTATCTTACCCTGGT+TGG 0.519375 6_4:-22387655 None:intergenic
TTTGTATTCAACATTGGCCA+AGG 0.526754 6_4:+22388537 Msa0982670:CDS
TCAATAACCCCTTTCATGAA+AGG 0.530003 6_4:-22389440 None:intergenic
ATTCAGATGTTGACTTGAGA+GGG 0.536872 6_4:-22387344 None:intergenic
AAACATTCATGGTTGAAAGC+TGG 0.541473 6_4:+22389842 Msa0982670:CDS
ATGAAGTGCCCTTCTAAAGC+AGG 0.542240 6_4:+22390899 Msa0982670:CDS
CATCAATTAGCCAAATTGGT+TGG 0.542518 6_4:-22388696 None:intergenic
TACCTATTGGTGATGTAACA+TGG 0.542999 6_4:+22391616 Msa0982670:three_prime_UTR
AATGCTATGTTCTGATAAGA+TGG 0.547033 6_4:-22387302 None:intergenic
CTTTGAAGCCACTTTCTGGA+GGG 0.551118 6_4:-22391433 None:intergenic
GAAGCTAAAAGAGAGCCAAC+AGG 0.551286 6_4:+22390656 Msa0982670:CDS
TAACAATGGGAAGAAACCTA+TGG 0.559013 6_4:+22390754 Msa0982670:CDS
GAAGAGCAAAGCTAAATGAA+AGG 0.559544 6_4:+22390313 Msa0982670:CDS
CAGATGTTGACTTGAGAGGG+AGG 0.560326 6_4:-22387341 None:intergenic
ATATCCTTCCTGCTTTAGAA+GGG 0.566065 6_4:-22390907 None:intergenic
ATGTCCTTTGTATTCAACAT+TGG 0.570336 6_4:+22388531 Msa0982670:CDS
CAATCAACAGAAGAAGCTGA+TGG 0.570848 6_4:+22390980 Msa0982670:CDS
CAAGCAAGCCCTCCAGAAAG+TGG 0.573779 6_4:+22391425 Msa0982670:CDS
TTTGTGACATAGAGGAGGCA+AGG 0.582275 6_4:+22390792 Msa0982670:CDS
ACTTTGAAGCCACTTTCTGG+AGG 0.587869 6_4:-22391434 None:intergenic
TTGTATTCAACATTGGCCAA+GGG 0.589483 6_4:+22388538 Msa0982670:CDS
TCTGAATCTGTTAACCAACC+AGG 0.589945 6_4:+22387641 Msa0982670:CDS
TAGTCGCGCTCTCCTCGCAA+AGG 0.589968 6_4:+22388744 Msa0982670:CDS
TGGTTTGCTTGAATCTCAAG+AGG 0.591791 6_4:+22390218 Msa0982670:CDS
AAAATCACATCATGATATGG+TGG 0.591939 6_4:+22390697 Msa0982670:CDS
GTTCCACGGATGCACACTGA+TGG 0.593993 6_4:+22390198 Msa0982670:CDS
ATCTCTGTGTGACACGCCAG+TGG 0.597772 6_4:-22391511 None:intergenic
AATCAACAGAAGAAGCTGAT+GGG 0.598027 6_4:+22390981 Msa0982670:CDS
ACAAGACTAGAGGCTGATGA+AGG 0.599190 6_4:+22390261 Msa0982670:CDS
AATTTCCAAAGGCCAAGACA+AGG 0.606654 6_4:+22390138 Msa0982670:CDS
ACCGAAAAGACTTACGTGAT+CGG 0.607356 6_4:-22389474 None:intergenic
GAGGAGAATGACTATAGAGA+AGG 0.612043 6_4:+22390237 Msa0982670:CDS
TCAGGTGAAAGTGCTGCAGA+AGG 0.614503 6_4:-22388471 None:intergenic
AAGACAAGGAAAACAAGTCA+AGG 0.617178 6_4:+22388345 Msa0982670:CDS
GAAAATTTGTGACATAGAGG+AGG 0.617806 6_4:+22390787 Msa0982670:CDS
AAACCATCAGTGTGCATCCG+TGG 0.620753 6_4:-22390201 None:intergenic
CTATGTTCTGATAAGATGGT+TGG 0.625847 6_4:-22387298 None:intergenic
ATTTGAGCTACCATTAGGAG+AGG 0.628279 6_4:-22389791 None:intergenic
CACATCATGATATGGTGGAG+AGG 0.629700 6_4:+22390702 Msa0982670:CDS
AAGGAAAACAAGTCAAGGAG+TGG 0.630274 6_4:+22388350 Msa0982670:CDS
CTGAATCTGTTAACCAACCA+GGG 0.631174 6_4:+22387642 Msa0982670:CDS
AATGGTGCCACAAAACATGA+AGG 0.633238 6_4:+22387565 Msa0982670:exon
TAGAGAAGGTACAAGACTAG+AGG 0.643862 6_4:+22390251 Msa0982670:CDS
GTGTGCCTGTGAATTTCCAA+AGG 0.646463 6_4:+22390127 Msa0982670:CDS
TTTCAGGGTGTTGAGCTGGG+GGG 0.650923 6_4:+22388299 Msa0982670:intron
CTGATATGGCTACAAAAGTG+TGG 0.653779 6_4:-22387372 None:intergenic
TCTCTGTGTGACACGCCAGT+GGG 0.655629 6_4:-22391510 None:intergenic
GAGAAACATATACCTTTGCG+AGG 0.658095 6_4:-22388756 None:intergenic
AATGTCAGTATGAGTGACAA+TGG 0.659345 6_4:+22390863 Msa0982670:CDS
TTGGCCAATGTTGAATACAA+AGG 0.661616 6_4:-22388535 None:intergenic
AAGCAATGACCAGTTAACAA+CGG 0.681259 6_4:+22390050 Msa0982670:CDS
ATTTCCAAAGGCCAAGACAA+GGG 0.685503 6_4:+22390139 Msa0982670:CDS
AGTGCCCTTCTAAAGCAGGA+AGG 0.694013 6_4:+22390903 Msa0982670:CDS
GCAAACCAAATAGTACCACT+CGG 0.699870 6_4:-22388508 None:intergenic
CTGACGAAATAGGCTTACAG+AGG 0.712274 6_4:+22388382 Msa0982670:CDS
TTGAATTCGAGAAATAACGA+AGG 0.725975 6_4:+22389685 Msa0982670:CDS
ACAATGGAGAGATTAAGACA+AGG 0.747987 6_4:+22388331 Msa0982670:CDS
ATGATCTCACAGATACCGAG+TGG 0.748813 6_4:+22388493 Msa0982670:CDS
GCAATGACCAGTTAACAACG+GGG 0.828924 6_4:+22390052 Msa0982670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTACTTTTTTTTTTTGAA+AGG - chr6_4:22387210-22387229 None:intergenic 15.0%
!! AGAAAACTATTAATAACTAT+TGG - chr6_4:22389079-22389098 None:intergenic 15.0%
!! TTTGGAAATTAATAGAATAA+AGG - chr6_4:22389304-22389323 None:intergenic 15.0%
!! ATTAATGTTATAAAAGACAA+TGG - chr6_4:22389504-22389523 None:intergenic 15.0%
!! TATAATAACAAAACTAACAA+TGG + chr6_4:22390740-22390759 Msa0982670:CDS 15.0%
!! ATAATAACAAAACTAACAAT+GGG + chr6_4:22390741-22390760 Msa0982670:CDS 15.0%
!! TATTTGAGTAAATAACAATT+TGG + chr6_4:22391046-22391065 Msa0982670:intron 15.0%
!!! ATTAACATTTTACAATTCTA+AGG - chr6_4:22391104-22391123 None:intergenic 15.0%
!! TAATAACATATCTAAATAGA+TGG - chr6_4:22391143-22391162 None:intergenic 15.0%
!! AAATATTGTTAATGTTATGT+AGG + chr6_4:22391300-22391319 Msa0982670:intron 15.0%
!! AATATTGTTAATGTTATGTA+GGG + chr6_4:22391301-22391320 Msa0982670:intron 15.0%
!!! ATATGTCATAAATTGTTTTC+AGG + chr6_4:22388120-22388139 Msa0982670:intron 20.0%
!! TGTACAATTTAAAAACAGAA+AGG - chr6_4:22388608-22388627 None:intergenic 20.0%
!! AAATTTACATGTGTTAAGAT+AGG + chr6_4:22389124-22389143 Msa0982670:intron 20.0%
!!! GATTTTTGGTTTCTAAAATT+TGG - chr6_4:22389360-22389379 None:intergenic 20.0%
!!! AAAGTTATTGAAGAAGATTT+TGG + chr6_4:22390170-22390189 Msa0982670:CDS 20.0%
!! AATATTACCTTACTATTTGA+AGG - chr6_4:22390363-22390382 None:intergenic 20.0%
!! ATTAAATACATTATTCATGC+AGG + chr6_4:22390562-22390581 Msa0982670:intron 20.0%
!! TAAAAAATCACATCATGATA+TGG + chr6_4:22390694-22390713 Msa0982670:CDS 20.0%
!! TCATCTAATCATTAAATCTA+AGG + chr6_4:22391009-22391028 Msa0982670:CDS 20.0%
!!! AATTTGGTATCTAAAATTGT+AGG + chr6_4:22391062-22391081 Msa0982670:intron 20.0%
!! AAACTTAGAGAATAATGTAA+GGG - chr6_4:22391173-22391192 None:intergenic 20.0%
!! ATATTGTTAATGTTATGTAG+GGG + chr6_4:22391302-22391321 Msa0982670:intron 20.0%
! TATATATATATATGCAGCAG+AGG - chr6_4:22387269-22387288 None:intergenic 25.0%
! TTTGGAAACAATAACTGATA+TGG - chr6_4:22387389-22387408 None:intergenic 25.0%
!!! TGTTTTTCAGTTACTAGATT+TGG - chr6_4:22387407-22387426 None:intergenic 25.0%
!! AAAAACAATCACTTCTGTTT+TGG + chr6_4:22387420-22387439 Msa0982670:five_prime_UTR 25.0%
! TAGCATAAACACATTTAATG+AGG - chr6_4:22387696-22387715 None:intergenic 25.0%
! AAACATGAACATATTCAAGA+AGG - chr6_4:22387733-22387752 None:intergenic 25.0%
! CATATAAAGTCTTAGTTTCA+AGG - chr6_4:22387764-22387783 None:intergenic 25.0%
!! CATCTAAGATAACAAATAAG+TGG - chr6_4:22387895-22387914 None:intergenic 25.0%
! ATGCTTAAGTCAATAATTGA+GGG - chr6_4:22388060-22388079 None:intergenic 25.0%
! TATGCTTAAGTCAATAATTG+AGG - chr6_4:22388061-22388080 None:intergenic 25.0%
! AGATTATCTTAGAGAGTTTA+TGG + chr6_4:22388085-22388104 Msa0982670:intron 25.0%
!! TATAAAGGCGTGTATAAAAA+GGG - chr6_4:22388838-22388857 None:intergenic 25.0%
!! TTATAAAGGCGTGTATAAAA+AGG - chr6_4:22388839-22388858 None:intergenic 25.0%
! GGTGTACTTATAAAAAGAAA+GGG + chr6_4:22388870-22388889 Msa0982670:intron 25.0%
! TAACATTTATCTTCTTCCTT+TGG + chr6_4:22388940-22388959 Msa0982670:intron 25.0%
! TGGAGTTCATTTATAATACA+AGG - chr6_4:22389059-22389078 None:intergenic 25.0%
! TATCCATCCTTATTACTATT+TGG + chr6_4:22389199-22389218 Msa0982670:intron 25.0%
! ATCCATCCTTATTACTATTT+GGG + chr6_4:22389200-22389219 Msa0982670:intron 25.0%
!!! AGATTATTAGTCTTTAGGTT+TGG - chr6_4:22389322-22389341 None:intergenic 25.0%
!!! GTCTTAGATTATTAGTCTTT+AGG - chr6_4:22389327-22389346 None:intergenic 25.0%
!! AAATTACACAATGCATTGAT+AGG - chr6_4:22389382-22389401 None:intergenic 25.0%
! ACATTATTACAAGAAGTTGA+GGG - chr6_4:22389547-22389566 None:intergenic 25.0%
! AACATTATTACAAGAAGTTG+AGG - chr6_4:22389548-22389567 None:intergenic 25.0%
!!! GTTTTTAACTCTTAGATCAA+TGG + chr6_4:22390335-22390354 Msa0982670:CDS 25.0%
! AATGATCAAGCTAAGAAATA+TGG - chr6_4:22390399-22390418 None:intergenic 25.0%
! CATAATATTGTATCAAACAC+AGG + chr6_4:22390491-22390510 Msa0982670:intron 25.0%
! AGGAAGGATATTAGAAATTA+TGG + chr6_4:22390919-22390938 Msa0982670:CDS 25.0%
! GAAACTTAGAGAATAATGTA+AGG - chr6_4:22391174-22391193 None:intergenic 25.0%
! TTGCAAAATGTTAATCAGAT+TGG - chr6_4:22391264-22391283 None:intergenic 25.0%
! TAGTCACAAATGAAAATTCT+TGG + chr6_4:22391539-22391558 Msa0982670:three_prime_UTR 25.0%
!! TAATAGAAAAAGTTAGTCTC+TGG + chr6_4:22391587-22391606 Msa0982670:three_prime_UTR 25.0%
! ATAGATTCATGTCAAATCAT+TGG - chr6_4:22391706-22391725 None:intergenic 25.0%
ATTTCTGTCACAACTTTCTT+TGG + chr6_4:22387234-22387253 Msa0982670:five_prime_UTR 30.0%
AATGCTATGTTCTGATAAGA+TGG - chr6_4:22387305-22387324 None:intergenic 30.0%
TCTGTTGCATAAGTAGATAA+TGG + chr6_4:22387547-22387566 Msa0982670:exon 30.0%
AATGGAGCTATGTAATATTC+TGG + chr6_4:22387618-22387637 Msa0982670:CDS 30.0%
!! TGCCAAAATTTGATTTGAGA+TGG + chr6_4:22387801-22387820 Msa0982670:intron 30.0%
!! GCCAAAATTTGATTTGAGAT+GGG + chr6_4:22387802-22387821 Msa0982670:intron 30.0%
! ACCCATCTCAAATCAAATTT+TGG - chr6_4:22387806-22387825 None:intergenic 30.0%
TGAAAAATGGTCAAGGAAAA+AGG - chr6_4:22388284-22388303 None:intergenic 30.0%
!! TTTTTCCTTGACCATTTTTC+AGG + chr6_4:22388283-22388302 Msa0982670:intron 30.0%
!! TTTTCCTTGACCATTTTTCA+GGG + chr6_4:22388284-22388303 Msa0982670:intron 30.0%
ATGTCCTTTGTATTCAACAT+TGG + chr6_4:22388531-22388550 Msa0982670:CDS 30.0%
ACTAGAAAGGAACACAAAAA+AGG - chr6_4:22388582-22388601 None:intergenic 30.0%
ACTAAGAACACACAAATTTG+AGG - chr6_4:22388650-22388669 None:intergenic 30.0%
TATGTTTCTCTTTCTTTAGC+TGG + chr6_4:22388769-22388788 Msa0982670:intron 30.0%
GCCTTTATAAACTCACAAAA+GGG + chr6_4:22388849-22388868 Msa0982670:intron 30.0%
! ACCCTTTTGTGAGTTTATAA+AGG - chr6_4:22388853-22388872 None:intergenic 30.0%
GGGTGTACTTATAAAAAGAA+AGG + chr6_4:22388869-22388888 Msa0982670:intron 30.0%
TGTTTAAGGAACAAAACCAA+AGG - chr6_4:22388959-22388978 None:intergenic 30.0%
TTAGACTAAACACTAAAGAG+TGG - chr6_4:22389164-22389183 None:intergenic 30.0%
TTCCCAAATAGTAATAAGGA+TGG - chr6_4:22389205-22389224 None:intergenic 30.0%
!! CAATGCATTGATAGGATTTT+TGG - chr6_4:22389374-22389393 None:intergenic 30.0%
! TGTGTTTTCCTTTCATGAAA+GGG + chr6_4:22389432-22389451 Msa0982670:CDS 30.0%
ACTTCTTGTAATAATGTTGC+TGG + chr6_4:22389550-22389569 Msa0982670:intron 30.0%
TTGAATTCGAGAAATAACGA+AGG + chr6_4:22389685-22389704 Msa0982670:CDS 30.0%
GTTGAATTAATTCCAGAAGT+TGG + chr6_4:22389745-22389764 Msa0982670:CDS 30.0%
ATTATGTCATATCCAACTTC+TGG - chr6_4:22389760-22389779 None:intergenic 30.0%
! TGTTTCATTTGGTAGTTGAT+TGG - chr6_4:22389827-22389846 None:intergenic 30.0%
ACTACCAAATGAAACATTCA+TGG + chr6_4:22389831-22389850 Msa0982670:CDS 30.0%
TCAACCATGAATGTTTCATT+TGG - chr6_4:22389838-22389857 None:intergenic 30.0%
AAATATTTCTTCTGCTCCTA+AGG + chr6_4:22389933-22389952 Msa0982670:CDS 30.0%
TAACCAAAAAATGAGCTTAG+TGG + chr6_4:22389975-22389994 Msa0982670:CDS 30.0%
! AAGAATCAAGCTTTTGTGTT+TGG + chr6_4:22390097-22390116 Msa0982670:CDS 30.0%
! CTTCTTCAATAACTTTTGTG+AGG - chr6_4:22390166-22390185 None:intergenic 30.0%
AATGGTTCCTTCAAATAGTA+AGG + chr6_4:22390353-22390372 Msa0982670:CDS 30.0%
! TCATTTTCTCAAGCTTTCTA+AGG - chr6_4:22390625-22390644 None:intergenic 30.0%
TGAGAAAATGATAAGAGAGT+TGG + chr6_4:22390634-22390653 Msa0982670:CDS 30.0%
AAAATCACATCATGATATGG+TGG + chr6_4:22390697-22390716 Msa0982670:CDS 30.0%
!! ATTTTCCTCTTTTTCACCAT+AGG - chr6_4:22390773-22390792 None:intergenic 30.0%
! CTTCAAAAGGAAGTTCTAAT+AGG + chr6_4:22390834-22390853 Msa0982670:CDS 30.0%
TGAGATAATTGGTATTCTCA+TGG - chr6_4:22391237-22391256 None:intergenic 30.0%
! AGATTGGTTCTTGAGATAAT+TGG - chr6_4:22391248-22391267 None:intergenic 30.0%
!! TCCTTTTATTTGCAGTTCAA+AGG + chr6_4:22391375-22391394 Msa0982670:intron 30.0%
TCCTTTGAACTGCAAATAAA+AGG - chr6_4:22391379-22391398 None:intergenic 30.0%
! TTCAATTTAATTTCTCCCAC+TGG + chr6_4:22391495-22391514 Msa0982670:three_prime_UTR 30.0%
!! TCTCTGGAATAAATACCTAT+TGG + chr6_4:22391603-22391622 Msa0982670:three_prime_UTR 30.0%
TTGTTTCAGCACTTGTAAAT+TGG + chr6_4:22391643-22391662 Msa0982670:three_prime_UTR 30.0%
CTATGTTCTGATAAGATGGT+TGG - chr6_4:22387301-22387320 None:intergenic 35.0%
!! ATTCAGATGTTGACTTGAGA+GGG - chr6_4:22387347-22387366 None:intergenic 35.0%
AAACAGTTTGTATCTTACCC+TGG - chr6_4:22387662-22387681 None:intergenic 35.0%
! CTGCATTAAAGGTTTTTGCT+AGG + chr6_4:22387981-22388000 Msa0982670:intron 35.0%
CGATAAGCTGTTTATCAACA+AGG + chr6_4:22388258-22388277 Msa0982670:intron 35.0%
ACAATGGAGAGATTAAGACA+AGG + chr6_4:22388331-22388350 Msa0982670:CDS 35.0%
AAGACAAGGAAAACAAGTCA+AGG + chr6_4:22388345-22388364 Msa0982670:CDS 35.0%
!! GAACTTAGTTCTGACGAAAT+AGG + chr6_4:22388372-22388391 Msa0982670:CDS 35.0%
!! GTTGGTATCTACTGTTTTGA+GGG - chr6_4:22388436-22388455 None:intergenic 35.0%
ATACCAACCCTCAAACAAAA+AGG + chr6_4:22388448-22388467 Msa0982670:CDS 35.0%
TTGGCCAATGTTGAATACAA+AGG - chr6_4:22388538-22388557 None:intergenic 35.0%
TTTGTATTCAACATTGGCCA+AGG + chr6_4:22388537-22388556 Msa0982670:CDS 35.0%
TTGTATTCAACATTGGCCAA+GGG + chr6_4:22388538-22388557 Msa0982670:CDS 35.0%
AAAAGAGTGAGATTTACCCT+TGG - chr6_4:22388557-22388576 None:intergenic 35.0%
AACAGAAAGGCAAACTAGAA+AGG - chr6_4:22388595-22388614 None:intergenic 35.0%
TTGTGTGTTCTTAGTTTACC+AGG + chr6_4:22388655-22388674 Msa0982670:intron 35.0%
TAGAAAATGGCCAACCAATT+TGG + chr6_4:22388686-22388705 Msa0982670:CDS 35.0%
CATCAATTAGCCAAATTGGT+TGG - chr6_4:22388699-22388718 None:intergenic 35.0%
TCAGCATCAATTAGCCAAAT+TGG - chr6_4:22388703-22388722 None:intergenic 35.0%
CGCCTTTATAAACTCACAAA+AGG + chr6_4:22388848-22388867 Msa0982670:intron 35.0%
GACAGGTTCAAATGTGTTTA+AGG - chr6_4:22388973-22388992 None:intergenic 35.0%
TGTTAAGATAGGTCTTGCTT+TGG + chr6_4:22389135-22389154 Msa0982670:intron 35.0%
CAGGTTCCCAAATAGTAATA+AGG - chr6_4:22389209-22389228 None:intergenic 35.0%
ATTACTATTTGGGAACCTGT+AGG + chr6_4:22389210-22389229 Msa0982670:intron 35.0%
! GTGTGTTTTCCTTTCATGAA+AGG + chr6_4:22389431-22389450 Msa0982670:CDS 35.0%
! GTGTTTTCCTTTCATGAAAG+GGG + chr6_4:22389433-22389452 Msa0982670:CDS 35.0%
TCAATAACCCCTTTCATGAA+AGG - chr6_4:22389443-22389462 None:intergenic 35.0%
TTCCAATACCTTCACACAAA+AGG - chr6_4:22389584-22389603 None:intergenic 35.0%
AATGCATTTGAGCTACCATT+AGG - chr6_4:22389799-22389818 None:intergenic 35.0%
AAACATTCATGGTTGAAAGC+TGG + chr6_4:22389842-22389861 Msa0982670:CDS 35.0%
TATGCAGTCACTTGAATTCA+CGG - chr6_4:22389908-22389927 None:intergenic 35.0%
!!! GATCCACTAAGCTCATTTTT+TGG - chr6_4:22389981-22390000 None:intergenic 35.0%
TAATGCCAATCTTCACTTAG+AGG - chr6_4:22390003-22390022 None:intergenic 35.0%
AAGCAATGACCAGTTAACAA+CGG + chr6_4:22390050-22390069 Msa0982670:CDS 35.0%
!! AGCTTTTGTGTTTGGAACAA+AGG + chr6_4:22390105-22390124 Msa0982670:CDS 35.0%
! ACCATGTTTTGTCAGAAAGA+AGG + chr6_4:22390289-22390308 Msa0982670:CDS 35.0%
TCCTTCTTTCTGACAAAACA+TGG - chr6_4:22390293-22390312 None:intergenic 35.0%
GAAGAGCAAAGCTAAATGAA+AGG + chr6_4:22390313-22390332 Msa0982670:CDS 35.0%
GTTTGTGTTTGTGTTTGTGT+CGG - chr6_4:22390441-22390460 None:intergenic 35.0%
TAACAATGGGAAGAAACCTA+TGG + chr6_4:22390754-22390773 Msa0982670:CDS 35.0%
AGAAACCTATGGTGAAAAAG+AGG + chr6_4:22390765-22390784 Msa0982670:CDS 35.0%
GAGGAAAATTTGTGACATAG+AGG + chr6_4:22390784-22390803 Msa0982670:CDS 35.0%
GAAAATTTGTGACATAGAGG+AGG + chr6_4:22390787-22390806 Msa0982670:CDS 35.0%
ATGTGTTCAGATGCTTCAAA+AGG + chr6_4:22390821-22390840 Msa0982670:CDS 35.0%
AATGTCAGTATGAGTGACAA+TGG + chr6_4:22390863-22390882 Msa0982670:CDS 35.0%
!! ATATCCTTCCTGCTTTAGAA+GGG - chr6_4:22390910-22390929 None:intergenic 35.0%
! AATATCCTTCCTGCTTTAGA+AGG - chr6_4:22390911-22390930 None:intergenic 35.0%
AATCAACAGAAGAAGCTGAT+GGG + chr6_4:22390981-22391000 Msa0982670:CDS 35.0%
GGACTATAAGGACATTAAGT+TGG - chr6_4:22391216-22391235 None:intergenic 35.0%
! TGGTATTCTCATGGACTATA+AGG - chr6_4:22391228-22391247 None:intergenic 35.0%
TGTAGGGGACTAATTTGATA+AGG + chr6_4:22391317-22391336 Msa0982670:intron 35.0%
GTAGGGGACTAATTTGATAA+GGG + chr6_4:22391318-22391337 Msa0982670:intron 35.0%
!!! CTTTTTGTTGTTGCATTAGC+TGG - chr6_4:22391402-22391421 None:intergenic 35.0%
CAGCTAATGCAACAACAAAA+AGG + chr6_4:22391400-22391419 Msa0982670:CDS 35.0%
!! AAAACTTTGAAGCCACTTTC+TGG - chr6_4:22391440-22391459 None:intergenic 35.0%
!! TACCTATTGGTGATGTAACA+TGG + chr6_4:22391616-22391635 Msa0982670:three_prime_UTR 35.0%
GCACTTGTAAATTGGTAGAT+AGG + chr6_4:22391651-22391670 Msa0982670:three_prime_UTR 35.0%
!! GATTCAGATGTTGACTTGAG+AGG - chr6_4:22387348-22387367 None:intergenic 40.0%
CTGATATGGCTACAAAAGTG+TGG - chr6_4:22387375-22387394 None:intergenic 40.0%
!! AATGGTGCCACAAAACATGA+AGG + chr6_4:22387565-22387584 Msa0982670:exon 40.0%
! AGTTGCTCCTTCATGTTTTG+TGG - chr6_4:22387575-22387594 None:intergenic 40.0%
!! TGGCAGTTAGAAGCATTCAA+TGG + chr6_4:22387600-22387619 Msa0982670:CDS 40.0%
TCTGAATCTGTTAACCAACC+AGG + chr6_4:22387641-22387660 Msa0982670:CDS 40.0%
CTGAATCTGTTAACCAACCA+GGG + chr6_4:22387642-22387661 Msa0982670:CDS 40.0%
AGTTTGTATCTTACCCTGGT+TGG - chr6_4:22387658-22387677 None:intergenic 40.0%
! GCTACTACTTGCTGCATTAA+AGG + chr6_4:22387970-22387989 Msa0982670:intron 40.0%
AACACCCTGAAAAATGGTCA+AGG - chr6_4:22388291-22388310 None:intergenic 40.0%
!!! ATTTTTCAGGGTGTTGAGCT+GGG + chr6_4:22388296-22388315 Msa0982670:intron 40.0%
AAGGAAAACAAGTCAAGGAG+TGG + chr6_4:22388350-22388369 Msa0982670:CDS 40.0%
!! GGTTGGTATCTACTGTTTTG+AGG - chr6_4:22388437-22388456 None:intergenic 40.0%
!! CAGAAGGCCTTTTTGTTTGA+GGG - chr6_4:22388458-22388477 None:intergenic 40.0%
AGATACCGAGTGGTACTATT+TGG + chr6_4:22388503-22388522 Msa0982670:CDS 40.0%
GCAAACCAAATAGTACCACT+CGG - chr6_4:22388511-22388530 None:intergenic 40.0%
GAGAAACATATACCTTTGCG+AGG - chr6_4:22388759-22388778 None:intergenic 40.0%
AAGGCGTGTATAAAAAGGGA+CGG - chr6_4:22388834-22388853 None:intergenic 40.0%
AATTGATGCACTCTGAGCAT+GGG - chr6_4:22389000-22389019 None:intergenic 40.0%
TCAATGTAATTGCACGTCTC+TGG - chr6_4:22389241-22389260 None:intergenic 40.0%
ATGAAAGGGGTTATTGAGCT+AGG + chr6_4:22389446-22389465 Msa0982670:CDS 40.0%
! ACCGATCACGTAAGTCTTTT+CGG + chr6_4:22389473-22389492 Msa0982670:intron 40.0%
ACCGAAAAGACTTACGTGAT+CGG - chr6_4:22389477-22389496 None:intergenic 40.0%
! ATTCTTCGCCTTTTGTGTGA+AGG + chr6_4:22389573-22389592 Msa0982670:intron 40.0%
ATGTAGCTCGAGCGTTAATA+GGG - chr6_4:22389666-22389685 None:intergenic 40.0%
AATGTAGCTCGAGCGTTAAT+AGG - chr6_4:22389667-22389686 None:intergenic 40.0%
ATTTGAGCTACCATTAGGAG+AGG - chr6_4:22389794-22389813 None:intergenic 40.0%
ATTTCTTCTGCTCCTAAGGT+TGG + chr6_4:22389937-22389956 Msa0982670:CDS 40.0%
TTGCAATCTTCTCCAACCTT+AGG - chr6_4:22389952-22389971 None:intergenic 40.0%
TGGATCCTCTAAGTGAAGAT+TGG + chr6_4:22389995-22390014 Msa0982670:CDS 40.0%
AGCAATGACCAGTTAACAAC+GGG + chr6_4:22390051-22390070 Msa0982670:CDS 40.0%
AATTTCCAAAGGCCAAGACA+AGG + chr6_4:22390138-22390157 Msa0982670:CDS 40.0%
ATTTCCAAAGGCCAAGACAA+GGG + chr6_4:22390139-22390158 Msa0982670:CDS 40.0%
!! AGATTTTGGTCGAAGTTCCA+CGG + chr6_4:22390184-22390203 Msa0982670:CDS 40.0%
!! TGGTTTGCTTGAATCTCAAG+AGG + chr6_4:22390218-22390237 Msa0982670:CDS 40.0%
GAGGAGAATGACTATAGAGA+AGG + chr6_4:22390237-22390256 Msa0982670:CDS 40.0%
! TAGAGAAGGTACAAGACTAG+AGG + chr6_4:22390251-22390270 Msa0982670:CDS 40.0%
! GCACTGATACTTCAGATTGA+AGG - chr6_4:22390522-22390541 None:intergenic 40.0%
CTTCTAGACTCTATACCTGT+TGG - chr6_4:22390674-22390693 None:intergenic 40.0%
CAATCAACAGAAGAAGCTGA+TGG + chr6_4:22390980-22390999 Msa0982670:CDS 40.0%
GTCCATGTTACATCACCAAT+AGG - chr6_4:22391621-22391640 None:intergenic 40.0%
! CATGAAGGAGCAACTTGCTT+TGG + chr6_4:22387580-22387599 Msa0982670:CDS 45.0%
CAGCTCAACACCCTGAAAAA+TGG - chr6_4:22388297-22388316 None:intergenic 45.0%
!!! CATTTTTCAGGGTGTTGAGC+TGG + chr6_4:22388295-22388314 Msa0982670:intron 45.0%
!!! TTTTTCAGGGTGTTGAGCTG+GGG + chr6_4:22388297-22388316 Msa0982670:intron 45.0%
CTGACGAAATAGGCTTACAG+AGG + chr6_4:22388382-22388401 Msa0982670:CDS 45.0%
!! AGGCCTTTTTGTTTGAGGGT+TGG - chr6_4:22388454-22388473 None:intergenic 45.0%
!! GCAGAAGGCCTTTTTGTTTG+AGG - chr6_4:22388459-22388478 None:intergenic 45.0%
TCGGTATCTGTGAGATCATC+AGG - chr6_4:22388492-22388511 None:intergenic 45.0%
ATGATCTCACAGATACCGAG+TGG + chr6_4:22388493-22388512 Msa0982670:CDS 45.0%
!!! CCATTTTCTAGAGCTCTTCC+TGG - chr6_4:22388676-22388695 None:intergenic 45.0%
!! CCAGGAAGAGCTCTAGAAAA+TGG + chr6_4:22388673-22388692 Msa0982670:CDS 45.0%
! AGCTGGCTTCTTCTTTCTTC+TGG + chr6_4:22388786-22388805 Msa0982670:intron 45.0%
GAATTGATGCACTCTGAGCA+TGG - chr6_4:22389001-22389020 None:intergenic 45.0%
TGCTCAGAGTGCATCAATTC+AGG + chr6_4:22389001-22389020 Msa0982670:intron 45.0%
ACGTCTCTGGTATTACCTAC+AGG - chr6_4:22389228-22389247 None:intergenic 45.0%
TCGTCTCAACTTTCAGACAG+TGG + chr6_4:22389409-22389428 Msa0982670:intron 45.0%
!! CGCCTTTTGTGTGAAGGTAT+TGG + chr6_4:22389579-22389598 Msa0982670:intron 45.0%
AACACAGCAACCTCTCCTAA+TGG + chr6_4:22389781-22389800 Msa0982670:CDS 45.0%
! GGTTGAAAGCTGGCAAGTTT+TGG + chr6_4:22389852-22389871 Msa0982670:CDS 45.0%
GCAATGACCAGTTAACAACG+GGG + chr6_4:22390052-22390071 Msa0982670:CDS 45.0%
AATGCATCCCCGTTGTTAAC+TGG - chr6_4:22390062-22390081 None:intergenic 45.0%
GTGTGCCTGTGAATTTCCAA+AGG + chr6_4:22390127-22390146 Msa0982670:CDS 45.0%
! CTTGGCCTTTGGAAATTCAC+AGG - chr6_4:22390135-22390154 None:intergenic 45.0%
! TTTTGTGAGGTCCCTTGTCT+TGG - chr6_4:22390153-22390172 None:intergenic 45.0%
ACAAGACTAGAGGCTGATGA+AGG + chr6_4:22390261-22390280 Msa0982670:CDS 45.0%
! TGTTTGTGTCGGTGCTTCAT+AGG - chr6_4:22390430-22390449 None:intergenic 45.0%
GAAGCTAAAAGAGAGCCAAC+AGG + chr6_4:22390656-22390675 Msa0982670:CDS 45.0%
! CACATCATGATATGGTGGAG+AGG + chr6_4:22390702-22390721 Msa0982670:CDS 45.0%
TTTGTGACATAGAGGAGGCA+AGG + chr6_4:22390792-22390811 Msa0982670:CDS 45.0%
!! ATGAAGTGCCCTTCTAAAGC+AGG + chr6_4:22390899-22390918 Msa0982670:CDS 45.0%
!! CTTTGAAGCCACTTTCTGGA+GGG - chr6_4:22391436-22391455 None:intergenic 45.0%
!! ACTTTGAAGCCACTTTCTGG+AGG - chr6_4:22391437-22391456 None:intergenic 45.0%
!! GTATTTAAAAATAAAAAAAA+TGG + chr6_4:22391467-22391486 Msa0982670:three_prime_UTR 5.0%
!! CAGATGTTGACTTGAGAGGG+AGG - chr6_4:22387344-22387363 None:intergenic 50.0%
!!! TTTTCAGGGTGTTGAGCTGG+GGG + chr6_4:22388298-22388317 Msa0982670:intron 50.0%
TGGGGGGAAGGATACTACAA+TGG + chr6_4:22388315-22388334 Msa0982670:CDS 50.0%
! AGCAGCTGAGAGAGCTTTTC+AGG + chr6_4:22388409-22388428 Msa0982670:CDS 50.0%
!! TCAGGTGAAAGTGCTGCAGA+AGG - chr6_4:22388474-22388493 None:intergenic 50.0%
AAACCATCAGTGTGCATCCG+TGG - chr6_4:22390204-22390223 None:intergenic 50.0%
! TTGTGTCGGTGCTTCATAGG+TGG - chr6_4:22390427-22390446 None:intergenic 50.0%
!! AGTGCCCTTCTAAAGCAGGA+AGG + chr6_4:22390903-22390922 Msa0982670:CDS 50.0%
!! TTTCAGGGTGTTGAGCTGGG+GGG + chr6_4:22388299-22388318 Msa0982670:intron 55.0%
CTCTGAGCATGGGAGAAGAC+AGG - chr6_4:22388990-22389009 None:intergenic 55.0%
! AGGTCCCTTGTCTTGGCCTT+TGG - chr6_4:22390146-22390165 None:intergenic 55.0%
GTTCCACGGATGCACACTGA+TGG + chr6_4:22390198-22390217 Msa0982670:CDS 55.0%
CAAGCAAGCCCTCCAGAAAG+TGG + chr6_4:22391425-22391444 Msa0982670:CDS 55.0%
TCTCTGTGTGACACGCCAGT+GGG - chr6_4:22391513-22391532 None:intergenic 55.0%
ATCTCTGTGTGACACGCCAG+TGG - chr6_4:22391514-22391533 None:intergenic 55.0%
TAGTCGCGCTCTCCTCGCAA+AGG + chr6_4:22388744-22388763 Msa0982670:CDS 60.0%
!! AGGGTGTTGAGCTGGGGGGA+AGG + chr6_4:22388303-22388322 Msa0982670:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 22387157 22391757 22387157 ID=Msa0982670;Name=Msa0982670
chr6_4 mRNA 22387157 22391757 22387157 ID=Msa0982670-mRNA-1;Parent=Msa0982670;Name=Msa0982670-mRNA-1;_AED=0.06;_eAED=0.06;_QI=409|0.83|1|1|1|1|7|296|601
chr6_4 exon 22387157 22387663 22387157 ID=Msa0982670-mRNA-1:exon:7088;Parent=Msa0982670-mRNA-1
chr6_4 exon 22388305 22388559 22388305 ID=Msa0982670-mRNA-1:exon:7089;Parent=Msa0982670-mRNA-1
chr6_4 exon 22388669 22388765 22388669 ID=Msa0982670-mRNA-1:exon:7090;Parent=Msa0982670-mRNA-1
chr6_4 exon 22389425 22389481 22389425 ID=Msa0982670-mRNA-1:exon:7091;Parent=Msa0982670-mRNA-1
chr6_4 exon 22389595 22390374 22389595 ID=Msa0982670-mRNA-1:exon:7092;Parent=Msa0982670-mRNA-1
chr6_4 exon 22390584 22391030 22390584 ID=Msa0982670-mRNA-1:exon:7093;Parent=Msa0982670-mRNA-1
chr6_4 exon 22391390 22391757 22391390 ID=Msa0982670-mRNA-1:exon:7094;Parent=Msa0982670-mRNA-1
chr6_4 five_prime_UTR 22387157 22387565 22387157 ID=Msa0982670-mRNA-1:five_prime_utr;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22387566 22387663 22387566 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22388305 22388559 22388305 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22388669 22388765 22388669 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22389425 22389481 22389425 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22389595 22390374 22389595 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22390584 22391030 22390584 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 CDS 22391390 22391461 22391390 ID=Msa0982670-mRNA-1:cds;Parent=Msa0982670-mRNA-1
chr6_4 three_prime_UTR 22391462 22391757 22391462 ID=Msa0982670-mRNA-1:three_prime_utr;Parent=Msa0982670-mRNA-1
Gene Sequence

>Msa0982670

ATGGTGCCACAAAACATGAAGGAGCAACTTGCTTTGGCAGTTAGAAGCATTCAATGGAGCTATGTAATATTCTGGTCTGAATCTGTTAACCAACCAGGGGTGTTGAGCTGGGGGGAAGGATACTACAATGGAGAGATTAAGACAAGGAAAACAAGTCAAGGAGTGGAACTTAGTTCTGACGAAATAGGCTTACAGAGGAGTGAGCAGCTGAGAGAGCTTTTCAGGTCCCTCAAAACAGTAGATACCAACCCTCAAACAAAAAGGCCTTCTGCAGCACTTTCACCTGATGATCTCACAGATACCGAGTGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGTTTACCAGGAAGAGCTCTAGAAAATGGCCAACCAATTTGGCTAATTGATGCTGATTCTGTTGATTGCAAAGTGTTTAGTCGCGCTCTCCTCGCAAAGACAGTGGTGTGTTTTCCTTTCATGAAAGGGGTTATTGAGCTAGGCACAACCGATCACGTATTGGAAGATCTCAGTCTCATTCAACAGATCAAAACTTCTTTATCGAATAGTCTAAGCGTCGATGACCCTATTAACGCTCGAGCTACATTGAATTCGAGAAATAACGAAGGTGTTGCTTGTGTAGCATTTGATGATAATGATTATGATGTTGAATTAATTCCAGAAGTTGGATATGACATAATCAACACAGCAACCTCTCCTAATGGTAGCTCAAATGCATTACAAGCCAATCAACTACCAAATGAAACATTCATGGTTGAAAGCTGGCAAGTTTTGGATGATGATTTGAGCAACTGTGTTCATAACTCCGTGAATTCAAGTGACTGCATATCACAAAATATTTCTTCTGCTCCTAAGGTTGGAGAAGATTGCAATAATAACCAAAAAATGAGCTTAGTGGATCCTCTAAGTGAAGATTGGCATTATCAGAAAATTCTTTCAGAACTTTTAAAAAGCAATGACCAGTTAACAACGGGGATGCATTTTCAAAACTTTCATCAAGAATCAAGCTTTTGTGTTTGGAACAAAGGTGTGCCTGTGAATTTCCAAAGGCCAAGACAAGGGACCTCACAAAAGTTATTGAAGAAGATTTTGGTCGAAGTTCCACGGATGCACACTGATGGTTTGCTTGAATCTCAAGAGGAGAATGACTATAGAGAAGGTACAAGACTAGAGGCTGATGAAGGTATGAACCATGTTTTGTCAGAAAGAAGGAGAAGAGCAAAGCTAAATGAAAGGTTTTTAACTCTTAGATCAATGGTTCCTTCAAATAGTAAGGATGACAAAGTTTCTATACTAGATGATGCAATTGAATACCTTAGAAAGCTTGAGAAAATGATAAGAGAGTTGGAAGCTAAAAGAGAGCCAACAGGTATAGAGTCTAGAAGTAAAAAATCACATCATGATATGGTGGAGAGGACTTCTGATCAATACTATAATAACAAAACTAACAATGGGAAGAAACCTATGGTGAAAAAGAGGAAAATTTGTGACATAGAGGAGGCAAGGAGAGAGATGTGTTCAGATGCTTCAAAAGGAAGTTCTAATAGGAATGTTAATGTCAGTATGAGTGACAATGGAGTTGTAATTGAAATGAAGTGCCCTTCTAAAGCAGGAAGGATATTAGAAATTATGGAAGCAGTTAACAATCTCAACATAGATTTTAATTCAGTTCAATCAACAGAAGAAGCTGATGGGAGTCTTCATCTAATCATTAAATCTAAGTTCAAAGGACCAGCTAATGCAACAACAAAAAGGATCAAGCAAGCCCTCCAGAAAGTGGCTTCAAAGTTTTGA
Protein sequence

>Msa0982670

MVPQNMKEQLALAVRSIQWSYVIFWSESVNQPGVLSWGEGYYNGEIKTRKTSQGVELSSDEIGLQRSEQLRELFRSLKTVDTNPQTKRPSAALSPDDLTDTEWYYLVCMSFVFNIGQGLPGRALENGQPIWLIDADSVDCKVFSRALLAKTVVCFPFMKGVIELGTTDHVLEDLSLIQQIKTSLSNSLSVDDPINARATLNSRNNEGVACVAFDDNDYDVELIPEVGYDIINTATSPNGSSNALQANQLPNETFMVESWQVLDDDLSNCVHNSVNSSDCISQNISSAPKVGEDCNNNQKMSLVDPLSEDWHYQKILSELLKSNDQLTTGMHFQNFHQESSFCVWNKGVPVNFQRPRQGTSQKLLKKILVEVPRMHTDGLLESQEENDYREGTRLEADEGMNHVLSERRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKMIRELEAKREPTGIESRSKKSHHDMVERTSDQYYNNKTNNGKKPMVKKRKICDIEEARREMCSDASKGSSNRNVNVSMSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANATTKRIKQALQKVASKF*