Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438160 | XP_013468810.2 | 94.276 | 297 | 5 | 1 | 16 | 312 | 5 | 289 | 0.0 | 573 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438160 | sp|Q70FG7|DODA_BETVU | 61.172 | 273 | 93 | 2 | 38 | 309 | 7 | 267 | 5.98e-121 | 350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438160 | A0A396JW51 | 94.276 | 297 | 5 | 1 | 16 | 312 | 5 | 289 | 0.0 | 573 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000800 | Msa1438160 | 0.818397 | 2.002385e-52 | -8.615850e-47 |
Msa0004180 | Msa1438160 | -0.804654 | 1.947709e-49 | -8.615850e-47 |
Msa0004940 | Msa1438160 | 0.831741 | 1.406011e-55 | -8.615850e-47 |
Msa0004990 | Msa1438160 | 0.823004 | 1.748751e-53 | -8.615850e-47 |
Msa0011010 | Msa1438160 | 0.818112 | 2.322622e-52 | -8.615850e-47 |
Msa0011040 | Msa1438160 | 0.819416 | 1.174630e-52 | -8.615850e-47 |
Msa0014280 | Msa1438160 | 0.850214 | 1.962114e-60 | -8.615850e-47 |
Msa0026420 | Msa1438160 | 0.825023 | 5.874464e-54 | -8.615850e-47 |
Msa0030800 | Msa1438160 | 0.969350 | 5.407770e-130 | -8.615850e-47 |
Msa0031410 | Msa1438160 | 0.815641 | 8.329236e-52 | -8.615850e-47 |
Msa0034540 | Msa1438160 | 0.835918 | 1.268388e-56 | -8.615850e-47 |
Msa0046680 | Msa1438160 | 0.814856 | 1.244891e-51 | -8.615850e-47 |
Msa0048380 | Msa1438160 | 0.820906 | 5.353573e-53 | -8.615850e-47 |
Msa0050060 | Msa1438160 | 0.817316 | 3.513290e-52 | -8.615850e-47 |
Msa0051480 | Msa1438160 | 0.887434 | 1.432540e-72 | -8.615850e-47 |
Msa0051620 | Msa1438160 | 0.808925 | 2.436899e-50 | -8.615850e-47 |
Msa0051730 | Msa1438160 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
Msa0053040 | Msa1438160 | 0.831323 | 1.781710e-55 | -8.615850e-47 |
Msa0059420 | Msa1438160 | 0.821189 | 4.608169e-53 | -8.615850e-47 |
Msa0070120 | Msa1438160 | 0.845856 | 3.127448e-59 | -8.615850e-47 |
Msa0074690 | Msa1438160 | 0.816093 | 6.605488e-52 | -8.615850e-47 |
Msa0076640 | Msa1438160 | 0.815424 | 9.313031e-52 | -8.615850e-47 |
Msa0078210 | Msa1438160 | 0.961352 | 1.329171e-119 | -8.615850e-47 |
Msa0086360 | Msa1438160 | 0.845729 | 3.387046e-59 | -8.615850e-47 |
Msa0087900 | Msa1438160 | 0.816474 | 5.427960e-52 | -8.615850e-47 |
Msa0090650 | Msa1438160 | 0.801129 | 1.041447e-48 | -8.615850e-47 |
Msa0098380 | Msa1438160 | 0.826931 | 2.069490e-54 | -8.615850e-47 |
Msa0104090 | Msa1438160 | 0.810068 | 1.385137e-50 | -8.615850e-47 |
Msa0107830 | Msa1438160 | 0.877260 | 7.248285e-69 | -8.615850e-47 |
Msa0117650 | Msa1438160 | 0.842027 | 3.322957e-58 | -8.615850e-47 |
Msa1349420 | Msa1438160 | 0.826185 | 3.116532e-54 | -8.615850e-47 |
Msa1349830 | Msa1438160 | 0.840550 | 8.129228e-58 | -8.615850e-47 |
Msa1357570 | Msa1438160 | 0.823727 | 1.185204e-53 | -8.615850e-47 |
Msa1359770 | Msa1438160 | 0.831928 | 1.263881e-55 | -8.615850e-47 |
Msa1361710 | Msa1438160 | 0.842604 | 2.335866e-58 | -8.615850e-47 |
Msa1362630 | Msa1438160 | 0.808318 | 3.284739e-50 | -8.615850e-47 |
Msa1364690 | Msa1438160 | 0.815379 | 9.528517e-52 | -8.615850e-47 |
Msa1366470 | Msa1438160 | 0.805487 | 1.303778e-49 | -8.615850e-47 |
Msa1366480 | Msa1438160 | 0.830954 | 2.195461e-55 | -8.615850e-47 |
Msa1369320 | Msa1438160 | 0.815893 | 7.321644e-52 | -8.615850e-47 |
Msa1369450 | Msa1438160 | 0.812471 | 4.170295e-51 | -8.615850e-47 |
Msa1372460 | Msa1438160 | -0.801885 | 7.290481e-49 | -8.615850e-47 |
Msa1375890 | Msa1438160 | 0.803550 | 3.304638e-49 | -8.615850e-47 |
Msa1376520 | Msa1438160 | 0.801389 | 9.215878e-49 | -8.615850e-47 |
Msa1377050 | Msa1438160 | 0.896138 | 4.919143e-76 | -8.615850e-47 |
Msa1378020 | Msa1438160 | 0.808142 | 3.580594e-50 | -8.615850e-47 |
Msa1381300 | Msa1438160 | -0.800808 | 1.211322e-48 | -8.615850e-47 |
Msa1382740 | Msa1438160 | 0.818140 | 2.289610e-52 | -8.615850e-47 |
Msa1383790 | Msa1438160 | 0.824006 | 1.019651e-53 | -8.615850e-47 |
Msa1387610 | Msa1438160 | 0.888471 | 5.733493e-73 | -8.615850e-47 |
Msa1395250 | Msa1438160 | 0.826389 | 2.786585e-54 | -8.615850e-47 |
Msa1398120 | Msa1438160 | 0.873277 | 1.664989e-67 | -8.615850e-47 |
Msa1398140 | Msa1438160 | 0.818170 | 2.253960e-52 | -8.615850e-47 |
Msa1399930 | Msa1438160 | 0.800658 | 1.299824e-48 | -8.615850e-47 |
Msa1401110 | Msa1438160 | 0.846709 | 1.832014e-59 | -8.615850e-47 |
Msa1405500 | Msa1438160 | 0.864972 | 8.274064e-65 | -8.615850e-47 |
Msa1405530 | Msa1438160 | 0.839397 | 1.624269e-57 | -8.615850e-47 |
Msa1408320 | Msa1438160 | 0.806230 | 9.097408e-50 | -8.615850e-47 |
Msa1413800 | Msa1438160 | 0.805344 | 1.396801e-49 | -8.615850e-47 |
Msa1419200 | Msa1438160 | 0.821704 | 3.505270e-53 | -8.615850e-47 |
Msa1422230 | Msa1438160 | 0.824350 | 8.464985e-54 | -8.615850e-47 |
Msa1427000 | Msa1438160 | 0.889724 | 1.873817e-73 | -8.615850e-47 |
Msa1432180 | Msa1438160 | 0.803269 | 3.778521e-49 | -8.615850e-47 |
Msa1435320 | Msa1438160 | 0.807393 | 5.165993e-50 | -8.615850e-47 |
Msa1436090 | Msa1438160 | 0.802758 | 4.818285e-49 | -8.615850e-47 |
Msa1437590 | Msa1438160 | 0.801915 | 7.187838e-49 | -8.615850e-47 |
Msa1438160 | Msa1439780 | 0.892521 | 1.470311e-74 | -8.615850e-47 |
Msa1438160 | Msa1443400 | 0.806414 | 8.321771e-50 | -8.615850e-47 |
Msa1438160 | Msa1443990 | 0.806466 | 8.115964e-50 | -8.615850e-47 |
Msa1438160 | Msa1448040 | 0.806118 | 9.608986e-50 | -8.615850e-47 |
Msa1438160 | Msa1449470 | 0.887684 | 1.149497e-72 | -8.615850e-47 |
Msa1438160 | Msa1450970 | 0.857487 | 1.578187e-62 | -8.615850e-47 |
Msa1438160 | Msa1453600 | 0.856768 | 2.572725e-62 | -8.615850e-47 |
Msa1438160 | Msa1453890 | 0.829301 | 5.557095e-55 | -8.615850e-47 |
Msa1438160 | Msa1455200 | 0.816467 | 5.449217e-52 | -8.615850e-47 |
Msa1438160 | Msa1459920 | 0.850536 | 1.594008e-60 | -8.615850e-47 |
Msa1438160 | Msa1459930 | 0.854203 | 1.439089e-61 | -8.615850e-47 |
Msa1438160 | Msa1464140 | 0.838924 | 2.153159e-57 | -8.615850e-47 |
Msa0604220 | Msa1438160 | 0.805885 | 1.075592e-49 | -8.615850e-47 |
Msa0606340 | Msa1438160 | -0.816884 | 4.393439e-52 | -8.615850e-47 |
Msa0614960 | Msa1438160 | 0.831841 | 1.327772e-55 | -8.615850e-47 |
Msa0619030 | Msa1438160 | -0.804419 | 2.180022e-49 | -8.615850e-47 |
Msa0622800 | Msa1438160 | -0.804320 | 2.286249e-49 | -8.615850e-47 |
Msa0628200 | Msa1438160 | 0.852999 | 3.193087e-61 | -8.615850e-47 |
Msa0629140 | Msa1438160 | 0.828029 | 1.128389e-54 | -8.615850e-47 |
Msa0631130 | Msa1438160 | 0.836708 | 7.988784e-57 | -8.615850e-47 |
Msa0637590 | Msa1438160 | 0.812324 | 4.490002e-51 | -8.615850e-47 |
Msa0637700 | Msa1438160 | 0.804443 | 2.154840e-49 | -8.615850e-47 |
Msa0644340 | Msa1438160 | 0.819333 | 1.226925e-52 | -8.615850e-47 |
Msa0651820 | Msa1438160 | 0.842121 | 3.136618e-58 | -8.615850e-47 |
Msa0652590 | Msa1438160 | 0.857488 | 1.577797e-62 | -8.615850e-47 |
Msa0652600 | Msa1438160 | 0.831353 | 1.751156e-55 | -8.615850e-47 |
Msa0652610 | Msa1438160 | 0.829548 | 4.839209e-55 | -8.615850e-47 |
Msa0655370 | Msa1438160 | 0.812035 | 5.191805e-51 | -8.615850e-47 |
Msa0655940 | Msa1438160 | 0.808836 | 2.546686e-50 | -8.615850e-47 |
Msa0657260 | Msa1438160 | 0.859175 | 4.960062e-63 | -8.615850e-47 |
Msa0657340 | Msa1438160 | 0.835601 | 1.526482e-56 | -8.615850e-47 |
Msa0660650 | Msa1438160 | 0.823195 | 1.578358e-53 | -8.615850e-47 |
Msa0661330 | Msa1438160 | 0.837346 | 5.487106e-57 | -8.615850e-47 |
Msa0666580 | Msa1438160 | 0.803050 | 4.193925e-49 | -8.615850e-47 |
Msa0666950 | Msa1438160 | 0.854442 | 1.227221e-61 | -8.615850e-47 |
Msa0669350 | Msa1438160 | 0.850471 | 1.662623e-60 | -8.615850e-47 |
Msa0675590 | Msa1438160 | 0.813271 | 2.785207e-51 | -8.615850e-47 |
Msa0675620 | Msa1438160 | 0.847644 | 1.014889e-59 | -8.615850e-47 |
Msa0675630 | Msa1438160 | 0.816135 | 6.464782e-52 | -8.615850e-47 |
Msa0690100 | Msa1438160 | -0.802788 | 4.751085e-49 | -8.615850e-47 |
Msa0694320 | Msa1438160 | 0.865006 | 8.071048e-65 | -8.615850e-47 |
Msa0699170 | Msa1438160 | 0.836456 | 9.259634e-57 | -8.615850e-47 |
Msa0699800 | Msa1438160 | 0.827091 | 1.894443e-54 | -8.615850e-47 |
Msa0701430 | Msa1438160 | 0.831005 | 2.132488e-55 | -8.615850e-47 |
Msa0701490 | Msa1438160 | 0.856736 | 2.630448e-62 | -8.615850e-47 |
Msa0701560 | Msa1438160 | 0.855141 | 7.697807e-62 | -8.615850e-47 |
Msa0704560 | Msa1438160 | 0.891503 | 3.742015e-74 | -8.615850e-47 |
Msa0716620 | Msa1438160 | 0.843463 | 1.379513e-58 | -8.615850e-47 |
Msa0727230 | Msa1438160 | 0.842366 | 2.701688e-58 | -8.615850e-47 |
Msa0731580 | Msa1438160 | 0.844806 | 6.016280e-59 | -8.615850e-47 |
Msa0732040 | Msa1438160 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
Msa0738680 | Msa1438160 | 0.807873 | 4.086283e-50 | -8.615850e-47 |
Msa0740630 | Msa1438160 | 0.860076 | 2.656679e-63 | -8.615850e-47 |
Msa0743370 | Msa1438160 | 0.800284 | 1.548859e-48 | -8.615850e-47 |
Msa0744550 | Msa1438160 | 0.850442 | 1.693783e-60 | -8.615850e-47 |
Msa0744560 | Msa1438160 | 0.855142 | 7.691501e-62 | -8.615850e-47 |
Msa0744710 | Msa1438160 | 0.830087 | 3.577775e-55 | -8.615850e-47 |
Msa0746340 | Msa1438160 | 0.858742 | 6.685797e-63 | -8.615850e-47 |
Msa0747710 | Msa1438160 | 0.821783 | 3.360290e-53 | -8.615850e-47 |
Msa0750790 | Msa1438160 | 0.831865 | 1.309891e-55 | -8.615850e-47 |
Msa0750830 | Msa1438160 | 0.821155 | 4.691632e-53 | -8.615850e-47 |
Msa0758520 | Msa1438160 | 0.808485 | 3.026719e-50 | -8.615850e-47 |
Msa0758570 | Msa1438160 | 0.803970 | 2.702786e-49 | -8.615850e-47 |
Msa0771810 | Msa1438160 | 0.841676 | 4.112488e-58 | -8.615850e-47 |
Msa0772350 | Msa1438160 | 0.829764 | 4.288040e-55 | -8.615850e-47 |
Msa0773020 | Msa1438160 | 0.810307 | 1.230250e-50 | -8.615850e-47 |
Msa0789780 | Msa1438160 | 0.810490 | 1.123179e-50 | -8.615850e-47 |
Msa0793270 | Msa1438160 | 0.869280 | 3.483898e-66 | -8.615850e-47 |
Msa0794100 | Msa1438160 | 0.802722 | 4.901847e-49 | -8.615850e-47 |
Msa0794200 | Msa1438160 | 0.823952 | 1.049927e-53 | -8.615850e-47 |
Msa0795320 | Msa1438160 | 0.887400 | 1.474767e-72 | -8.615850e-47 |
Msa0799120 | Msa1438160 | 0.808531 | 2.958630e-50 | -8.615850e-47 |
Msa0802600 | Msa1438160 | 0.807309 | 5.382202e-50 | -8.615850e-47 |
Msa0804870 | Msa1438160 | 0.818627 | 1.775930e-52 | -8.615850e-47 |
Msa0809920 | Msa1438160 | 0.851994 | 6.172808e-61 | -8.615850e-47 |
Msa0810340 | Msa1438160 | 0.826122 | 3.225978e-54 | -8.615850e-47 |
Msa0814660 | Msa1438160 | 0.812039 | 5.180749e-51 | -8.615850e-47 |
Msa0819110 | Msa1438160 | 0.801060 | 1.075967e-48 | -8.615850e-47 |
Msa0819150 | Msa1438160 | 0.803321 | 3.686392e-49 | -8.615850e-47 |
Msa0820880 | Msa1438160 | 0.860908 | 1.487680e-63 | -8.615850e-47 |
Msa0826240 | Msa1438160 | 0.834708 | 2.563286e-56 | -8.615850e-47 |
Msa0826360 | Msa1438160 | 0.852765 | 3.723612e-61 | -8.615850e-47 |
Msa0826370 | Msa1438160 | 0.826502 | 2.618613e-54 | -8.615850e-47 |
Msa0826450 | Msa1438160 | 0.805528 | 1.277963e-49 | -8.615850e-47 |
Msa0829990 | Msa1438160 | 0.813366 | 2.654393e-51 | -8.615850e-47 |
Msa0831310 | Msa1438160 | 0.819977 | 8.746521e-53 | -8.615850e-47 |
Msa0832950 | Msa1438160 | 0.807831 | 4.170472e-50 | -8.615850e-47 |
Msa0837550 | Msa1438160 | 0.812161 | 4.873637e-51 | -8.615850e-47 |
Msa0838870 | Msa1438160 | 0.811542 | 6.647332e-51 | -8.615850e-47 |
Msa0839530 | Msa1438160 | 0.801804 | 7.573711e-49 | -8.615850e-47 |
Msa0121320 | Msa1438160 | 0.802938 | 4.423116e-49 | -8.615850e-47 |
Msa0125890 | Msa1438160 | 0.815155 | 1.068429e-51 | -8.615850e-47 |
Msa0126430 | Msa1438160 | 0.828968 | 6.693194e-55 | -8.615850e-47 |
Msa0129290 | Msa1438160 | 0.839331 | 1.689129e-57 | -8.615850e-47 |
Msa0129770 | Msa1438160 | 0.835126 | 2.011911e-56 | -8.615850e-47 |
Msa0143640 | Msa1438160 | 0.882496 | 9.923815e-71 | -8.615850e-47 |
Msa0143830 | Msa1438160 | 0.865093 | 7.579710e-65 | -8.615850e-47 |
Msa0146200 | Msa1438160 | 0.890842 | 6.835520e-74 | -8.615850e-47 |
Msa0150620 | Msa1438160 | 0.836719 | 7.935537e-57 | -8.615850e-47 |
Msa0150640 | Msa1438160 | 0.826222 | 3.053292e-54 | -8.615850e-47 |
Msa0161230 | Msa1438160 | 0.818768 | 1.650045e-52 | -8.615850e-47 |
Msa0162680 | Msa1438160 | 0.876962 | 9.194580e-69 | -8.615850e-47 |
Msa0164250 | Msa1438160 | 0.806297 | 8.807662e-50 | -8.615850e-47 |
Msa0164350 | Msa1438160 | 0.828581 | 8.304686e-55 | -8.615850e-47 |
Msa0175240 | Msa1438160 | -0.803028 | 4.237324e-49 | -8.615850e-47 |
Msa0179830 | Msa1438160 | 0.815673 | 8.193458e-52 | -8.615850e-47 |
Msa0185040 | Msa1438160 | 0.839751 | 1.313384e-57 | -8.615850e-47 |
Msa0185100 | Msa1438160 | 0.858705 | 6.855901e-63 | -8.615850e-47 |
Msa0186240 | Msa1438160 | 0.863864 | 1.835785e-64 | -8.615850e-47 |
Msa0191470 | Msa1438160 | 0.834656 | 2.642099e-56 | -8.615850e-47 |
Msa0193190 | Msa1438160 | 0.825798 | 3.850234e-54 | -8.615850e-47 |
Msa0196420 | Msa1438160 | 0.838866 | 2.229807e-57 | -8.615850e-47 |
Msa0200090 | Msa1438160 | 0.807187 | 5.712000e-50 | -8.615850e-47 |
Msa0202380 | Msa1438160 | 0.816013 | 6.883855e-52 | -8.615850e-47 |
Msa0203090 | Msa1438160 | 0.828737 | 7.612166e-55 | -8.615850e-47 |
Msa0204170 | Msa1438160 | 0.852520 | 4.374743e-61 | -8.615850e-47 |
Msa0207930 | Msa1438160 | 0.812135 | 4.937893e-51 | -8.615850e-47 |
Msa0207970 | Msa1438160 | 0.838355 | 3.020981e-57 | -8.615850e-47 |
Msa0224210 | Msa1438160 | 0.818302 | 2.104040e-52 | -8.615850e-47 |
Msa0234740 | Msa1438160 | 0.800613 | 1.327814e-48 | -8.615850e-47 |
Msa0238330 | Msa1438160 | 0.854379 | 1.279844e-61 | -8.615850e-47 |
Msa1239190 | Msa1438160 | 0.848280 | 6.779930e-60 | -8.615850e-47 |
Msa1239210 | Msa1438160 | 0.843030 | 1.799675e-58 | -8.615850e-47 |
Msa1239940 | Msa1438160 | 0.803456 | 3.455387e-49 | -8.615850e-47 |
Msa1245890 | Msa1438160 | 0.820060 | 8.372517e-53 | -8.615850e-47 |
Msa1254870 | Msa1438160 | 0.868037 | 8.791565e-66 | -8.615850e-47 |
Msa1259030 | Msa1438160 | 0.818589 | 1.811486e-52 | -8.615850e-47 |
Msa1262540 | Msa1438160 | 0.834041 | 3.769386e-56 | -8.615850e-47 |
Msa1263110 | Msa1438160 | 0.823692 | 1.208192e-53 | -8.615850e-47 |
Msa1263120 | Msa1438160 | 0.837194 | 6.001208e-57 | -8.615850e-47 |
Msa1263500 | Msa1438160 | 0.876422 | 1.413721e-68 | -8.615850e-47 |
Msa1265900 | Msa1438160 | -0.811756 | 5.970352e-51 | -8.615850e-47 |
Msa1269200 | Msa1438160 | 0.848939 | 4.452649e-60 | -8.615850e-47 |
Msa1280960 | Msa1438160 | 0.802481 | 5.495499e-49 | -8.615850e-47 |
Msa1298090 | Msa1438160 | 0.802643 | 5.089920e-49 | -8.615850e-47 |
Msa1299480 | Msa1438160 | 0.886487 | 3.276662e-72 | -8.615850e-47 |
Msa1307930 | Msa1438160 | 0.832591 | 8.664006e-56 | -8.615850e-47 |
Msa1317740 | Msa1438160 | 0.800779 | 1.227774e-48 | -8.615850e-47 |
Msa1320160 | Msa1438160 | 0.857092 | 2.065761e-62 | -8.615850e-47 |
Msa1328430 | Msa1438160 | 0.869557 | 2.831093e-66 | -8.615850e-47 |
Msa1331950 | Msa1438160 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
Msa1333700 | Msa1438160 | 0.836778 | 7.664843e-57 | -8.615850e-47 |
Msa0368620 | Msa1438160 | 0.822480 | 2.316559e-53 | -8.615850e-47 |
Msa0370360 | Msa1438160 | 0.822069 | 2.885115e-53 | -8.615850e-47 |
Msa0378240 | Msa1438160 | 0.809840 | 1.551159e-50 | -8.615850e-47 |
Msa0378320 | Msa1438160 | 0.833004 | 6.838907e-56 | -8.615850e-47 |
Msa0383900 | Msa1438160 | 0.824642 | 7.225253e-54 | -8.615850e-47 |
Msa0383960 | Msa1438160 | 0.812900 | 3.359810e-51 | -8.615850e-47 |
Msa0385320 | Msa1438160 | 0.820253 | 7.563505e-53 | -8.615850e-47 |
Msa0389710 | Msa1438160 | 0.825154 | 5.470440e-54 | -8.615850e-47 |
Msa0390160 | Msa1438160 | 0.815169 | 1.060657e-51 | -8.615850e-47 |
Msa0390170 | Msa1438160 | 0.805520 | 1.283237e-49 | -8.615850e-47 |
Msa0390200 | Msa1438160 | 0.873037 | 2.004682e-67 | -8.615850e-47 |
Msa0390790 | Msa1438160 | 0.819492 | 1.129014e-52 | -8.615850e-47 |
Msa0393100 | Msa1438160 | 0.849464 | 3.180303e-60 | -8.615850e-47 |
Msa0396880 | Msa1438160 | 0.828920 | 6.873577e-55 | -8.615850e-47 |
Msa0397200 | Msa1438160 | 0.843686 | 1.202721e-58 | -8.615850e-47 |
Msa0400010 | Msa1438160 | 0.854356 | 1.299628e-61 | -8.615850e-47 |
Msa0402800 | Msa1438160 | 0.842066 | 3.244129e-58 | -8.615850e-47 |
Msa0405200 | Msa1438160 | 0.828080 | 1.096456e-54 | -8.615850e-47 |
Msa0405210 | Msa1438160 | 0.815553 | 8.717148e-52 | -8.615850e-47 |
Msa0415010 | Msa1438160 | 0.815842 | 7.515023e-52 | -8.615850e-47 |
Msa0420890 | Msa1438160 | 0.810098 | 1.365009e-50 | -8.615850e-47 |
Msa0421080 | Msa1438160 | 0.852524 | 4.363320e-61 | -8.615850e-47 |
Msa0427560 | Msa1438160 | 0.820425 | 6.905774e-53 | -8.615850e-47 |
Msa0427660 | Msa1438160 | 0.842648 | 2.274066e-58 | -8.615850e-47 |
Msa0429840 | Msa1438160 | 0.833752 | 4.451466e-56 | -8.615850e-47 |
Msa0434300 | Msa1438160 | 0.856466 | 3.157825e-62 | -8.615850e-47 |
Msa0434400 | Msa1438160 | 0.837191 | 6.012843e-57 | -8.615850e-47 |
Msa0434460 | Msa1438160 | 0.817732 | 2.831620e-52 | -8.615850e-47 |
Msa0438070 | Msa1438160 | 0.887318 | 1.585909e-72 | -8.615850e-47 |
Msa0438520 | Msa1438160 | 0.812143 | 4.917462e-51 | -8.615850e-47 |
Msa0443450 | Msa1438160 | 0.824024 | 1.009933e-53 | -8.615850e-47 |
Msa0447160 | Msa1438160 | 0.859803 | 3.212914e-63 | -8.615850e-47 |
Msa0449490 | Msa1438160 | 0.833659 | 4.697857e-56 | -8.615850e-47 |
Msa0449500 | Msa1438160 | 0.827376 | 1.618644e-54 | -8.615850e-47 |
Msa0449620 | Msa1438160 | 0.802604 | 5.184668e-49 | -8.615850e-47 |
Msa0459930 | Msa1438160 | 0.824305 | 8.674734e-54 | -8.615850e-47 |
Msa0460600 | Msa1438160 | 0.862889 | 3.679721e-64 | -8.615850e-47 |
Msa0466850 | Msa1438160 | 0.816979 | 4.181325e-52 | -8.615850e-47 |
Msa0478080 | Msa1438160 | 0.845736 | 3.370947e-59 | -8.615850e-47 |
Msa0480260 | Msa1438160 | 0.821041 | 4.985751e-53 | -8.615850e-47 |
Msa0480540 | Msa1438160 | 0.851266 | 9.927112e-61 | -8.615850e-47 |
Msa0480550 | Msa1438160 | 0.860199 | 2.439451e-63 | -8.615850e-47 |
Msa0481770 | Msa1438160 | 0.855190 | 7.448773e-62 | -8.615850e-47 |
Msa0983050 | Msa1438160 | 0.805739 | 1.154297e-49 | -8.615850e-47 |
Msa0985380 | Msa1438160 | 0.826112 | 3.243824e-54 | -8.615850e-47 |
Msa1001120 | Msa1438160 | 0.828007 | 1.142096e-54 | -8.615850e-47 |
Msa1003730 | Msa1438160 | 0.814394 | 1.575136e-51 | -8.615850e-47 |
Msa1003920 | Msa1438160 | 0.827919 | 1.199348e-54 | -8.615850e-47 |
Msa1007900 | Msa1438160 | 0.804197 | 2.424666e-49 | -8.615850e-47 |
Msa1023430 | Msa1438160 | 0.828363 | 9.371911e-55 | -8.615850e-47 |
Msa1027340 | Msa1438160 | 0.822921 | 1.829219e-53 | -8.615850e-47 |
Msa1027400 | Msa1438160 | 0.820551 | 6.461187e-53 | -8.615850e-47 |
Msa1027910 | Msa1438160 | 0.894910 | 1.580322e-75 | -8.615850e-47 |
Msa1029860 | Msa1438160 | 0.805990 | 1.022384e-49 | -8.615850e-47 |
Msa1030210 | Msa1438160 | 0.886303 | 3.846302e-72 | -8.615850e-47 |
Msa1031780 | Msa1438160 | 0.830768 | 2.437642e-55 | -8.615850e-47 |
Msa1035050 | Msa1438160 | 0.855472 | 6.164742e-62 | -8.615850e-47 |
Msa1037360 | Msa1438160 | 0.808203 | 3.476133e-50 | -8.615850e-47 |
Msa1040330 | Msa1438160 | 0.828386 | 9.251590e-55 | -8.615850e-47 |
Msa1041250 | Msa1438160 | 0.822526 | 2.259722e-53 | -8.615850e-47 |
Msa1061840 | Msa1438160 | 0.852686 | 3.923656e-61 | -8.615850e-47 |
Msa1061970 | Msa1438160 | 0.805306 | 1.422857e-49 | -8.615850e-47 |
Msa1062060 | Msa1438160 | 0.825229 | 5.252438e-54 | -8.615850e-47 |
Msa1062070 | Msa1438160 | 0.811283 | 7.566794e-51 | -8.615850e-47 |
Msa1064240 | Msa1438160 | 0.841519 | 4.524617e-58 | -8.615850e-47 |
Msa1069250 | Msa1438160 | 0.878824 | 2.054325e-69 | -8.615850e-47 |
Msa1071350 | Msa1438160 | 0.806818 | 6.836846e-50 | -8.615850e-47 |
Msa1075090 | Msa1438160 | 0.857331 | 1.755450e-62 | -8.615850e-47 |
Msa1077970 | Msa1438160 | 0.815062 | 1.120324e-51 | -8.615850e-47 |
Msa1078120 | Msa1438160 | -0.802662 | 5.042952e-49 | -8.615850e-47 |
Msa1080650 | Msa1438160 | 0.801724 | 7.867805e-49 | -8.615850e-47 |
Msa1080820 | Msa1438160 | 0.806138 | 9.513340e-50 | -8.615850e-47 |
Msa1082080 | Msa1438160 | 0.814143 | 1.789854e-51 | -8.615850e-47 |
Msa1083660 | Msa1438160 | -0.804103 | 2.536800e-49 | -8.615850e-47 |
Msa1084890 | Msa1438160 | 0.880534 | 5.069751e-70 | -8.615850e-47 |
Msa1087210 | Msa1438160 | 0.841231 | 5.385620e-58 | -8.615850e-47 |
Msa1095590 | Msa1438160 | 0.830024 | 3.706581e-55 | -8.615850e-47 |
Msa1102210 | Msa1438160 | 0.834793 | 2.440134e-56 | -8.615850e-47 |
Msa1105320 | Msa1438160 | 0.815995 | 6.945370e-52 | -8.615850e-47 |
Msa0242720 | Msa1438160 | 0.824425 | 8.130433e-54 | -8.615850e-47 |
Msa0246140 | Msa1438160 | 0.865927 | 4.140301e-65 | -8.615850e-47 |
Msa0247470 | Msa1438160 | 0.841263 | 5.284936e-58 | -8.615850e-47 |
Msa0254640 | Msa1438160 | 0.807153 | 5.808869e-50 | -8.615850e-47 |
Msa0257760 | Msa1438160 | 0.806982 | 6.313391e-50 | -8.615850e-47 |
Msa0261020 | Msa1438160 | -0.806849 | 6.736728e-50 | -8.615850e-47 |
Msa0265480 | Msa1438160 | 0.832306 | 1.019466e-55 | -8.615850e-47 |
Msa0265650 | Msa1438160 | 0.804424 | 2.174600e-49 | -8.615850e-47 |
Msa0267700 | Msa1438160 | 0.841489 | 4.607601e-58 | -8.615850e-47 |
Msa0267900 | Msa1438160 | 0.965983 | 2.562840e-125 | -8.615850e-47 |
Msa0269710 | Msa1438160 | 0.832881 | 7.337866e-56 | -8.615850e-47 |
Msa0271700 | Msa1438160 | 0.884982 | 1.203371e-71 | -8.615850e-47 |
Msa0271720 | Msa1438160 | 0.877955 | 4.148295e-69 | -8.615850e-47 |
Msa0273070 | Msa1438160 | 0.851113 | 1.096266e-60 | -8.615850e-47 |
Msa0275730 | Msa1438160 | 0.881276 | 2.745560e-70 | -8.615850e-47 |
Msa0284730 | Msa1438160 | 0.829013 | 6.527420e-55 | -8.615850e-47 |
Msa0285580 | Msa1438160 | 0.806547 | 7.800093e-50 | -8.615850e-47 |
Msa0285890 | Msa1438160 | 0.835612 | 1.516194e-56 | -8.615850e-47 |
Msa0291880 | Msa1438160 | 0.825119 | 5.576905e-54 | -8.615850e-47 |
Msa0306310 | Msa1438160 | 0.819466 | 1.144598e-52 | -8.615850e-47 |
Msa0310190 | Msa1438160 | 0.840187 | 1.011225e-57 | -8.615850e-47 |
Msa0312300 | Msa1438160 | 0.845948 | 2.952583e-59 | -8.615850e-47 |
Msa0316230 | Msa1438160 | 0.864821 | 9.229722e-65 | -8.615850e-47 |
Msa0319680 | Msa1438160 | 0.857447 | 1.622290e-62 | -8.615850e-47 |
Msa0320140 | Msa1438160 | 0.803086 | 4.122223e-49 | -8.615850e-47 |
Msa0320170 | Msa1438160 | 0.809853 | 1.541120e-50 | -8.615850e-47 |
Msa0324810 | Msa1438160 | 0.860480 | 2.005352e-63 | -8.615850e-47 |
Msa0324840 | Msa1438160 | 0.869439 | 3.092973e-66 | -8.615850e-47 |
Msa0332360 | Msa1438160 | 0.807163 | 5.781791e-50 | -8.615850e-47 |
Msa0336550 | Msa1438160 | -0.807819 | 4.195645e-50 | -8.615850e-47 |
Msa0340370 | Msa1438160 | 0.854202 | 1.440111e-61 | -8.615850e-47 |
Msa0345890 | Msa1438160 | 0.817019 | 4.097728e-52 | -8.615850e-47 |
Msa0345980 | Msa1438160 | 0.848333 | 6.552015e-60 | -8.615850e-47 |
Msa0346170 | Msa1438160 | 0.847637 | 1.019714e-59 | -8.615850e-47 |
Msa0350180 | Msa1438160 | 0.810225 | 1.281544e-50 | -8.615850e-47 |
Msa0353010 | Msa1438160 | 0.860928 | 1.466508e-63 | -8.615850e-47 |
Msa1107220 | Msa1438160 | 0.846122 | 2.647967e-59 | -8.615850e-47 |
Msa1107250 | Msa1438160 | 0.820956 | 5.214317e-53 | -8.615850e-47 |
Msa1107510 | Msa1438160 | 0.829159 | 6.015577e-55 | -8.615850e-47 |
Msa1108560 | Msa1438160 | 0.808668 | 2.765360e-50 | -8.615850e-47 |
Msa1110900 | Msa1438160 | 0.851963 | 6.298977e-61 | -8.615850e-47 |
Msa1115980 | Msa1438160 | 0.842506 | 2.480770e-58 | -8.615850e-47 |
Msa1118960 | Msa1438160 | 0.807080 | 6.020716e-50 | -8.615850e-47 |
Msa1120580 | Msa1438160 | 0.874095 | 8.825102e-68 | -8.615850e-47 |
Msa1120960 | Msa1438160 | 0.808018 | 3.805289e-50 | -8.615850e-47 |
Msa1123000 | Msa1438160 | 0.806501 | 7.979613e-50 | -8.615850e-47 |
Msa1127940 | Msa1438160 | 0.805448 | 1.328511e-49 | -8.615850e-47 |
Msa1131120 | Msa1438160 | 0.853415 | 2.426669e-61 | -8.615850e-47 |
Msa1136630 | Msa1438160 | 0.810465 | 1.137290e-50 | -8.615850e-47 |
Msa1136690 | Msa1438160 | 0.800203 | 1.608935e-48 | -8.615850e-47 |
Msa1136760 | Msa1438160 | 0.833938 | 3.999173e-56 | -8.615850e-47 |
Msa1137750 | Msa1438160 | 0.895071 | 1.356683e-75 | -8.615850e-47 |
Msa1142390 | Msa1438160 | 0.835704 | 1.436893e-56 | -8.615850e-47 |
Msa1150740 | Msa1438160 | 0.816546 | 5.229268e-52 | -8.615850e-47 |
Msa1150750 | Msa1438160 | 0.805992 | 1.021089e-49 | -8.615850e-47 |
Msa1150760 | Msa1438160 | 0.839337 | 1.683077e-57 | -8.615850e-47 |
Msa1151070 | Msa1438160 | 0.818301 | 2.105423e-52 | -8.615850e-47 |
Msa1154240 | Msa1438160 | 0.840087 | 1.074057e-57 | -8.615850e-47 |
Msa1154570 | Msa1438160 | 0.821194 | 4.597444e-53 | -8.615850e-47 |
Msa1157110 | Msa1438160 | 0.868782 | 5.055210e-66 | -8.615850e-47 |
Msa1157200 | Msa1438160 | 0.812171 | 4.848487e-51 | -8.615850e-47 |
Msa1162430 | Msa1438160 | 0.863905 | 1.782669e-64 | -8.615850e-47 |
Msa1164230 | Msa1438160 | 0.804943 | 1.694936e-49 | -8.615850e-47 |
Msa1165670 | Msa1438160 | 0.818574 | 1.826161e-52 | -8.615850e-47 |
Msa1165860 | Msa1438160 | 0.809347 | 1.978996e-50 | -8.615850e-47 |
Msa1174280 | Msa1438160 | 0.857202 | 1.916290e-62 | -8.615850e-47 |
Msa1184400 | Msa1438160 | 0.819160 | 1.343411e-52 | -8.615850e-47 |
Msa1185270 | Msa1438160 | 0.839258 | 1.764481e-57 | -8.615850e-47 |
Msa1187490 | Msa1438160 | 0.812006 | 5.266877e-51 | -8.615850e-47 |
Msa1191270 | Msa1438160 | 0.804376 | 2.225047e-49 | -8.615850e-47 |
Msa1202110 | Msa1438160 | 0.865493 | 5.675196e-65 | -8.615850e-47 |
Msa1203810 | Msa1438160 | 0.812009 | 5.258307e-51 | -8.615850e-47 |
Msa1208840 | Msa1438160 | 0.809063 | 2.277461e-50 | -8.615850e-47 |
Msa1211610 | Msa1438160 | 0.891446 | 3.944446e-74 | -8.615850e-47 |
Msa1217260 | Msa1438160 | 0.817133 | 3.863002e-52 | -8.615850e-47 |
Msa1223560 | Msa1438160 | 0.883276 | 5.146750e-71 | -8.615850e-47 |
Msa1223960 | Msa1438160 | 0.825043 | 5.812856e-54 | -8.615850e-47 |
Msa1223990 | Msa1438160 | 0.856531 | 3.020996e-62 | -8.615850e-47 |
Msa1224510 | Msa1438160 | 0.840790 | 7.033423e-58 | -8.615850e-47 |
Msa0483000 | Msa1438160 | 0.840884 | 6.644540e-58 | -8.615850e-47 |
Msa0488580 | Msa1438160 | 0.850210 | 1.967891e-60 | -8.615850e-47 |
Msa0489370 | Msa1438160 | 0.809067 | 2.272964e-50 | -8.615850e-47 |
Msa0490100 | Msa1438160 | 0.815446 | 9.206085e-52 | -8.615850e-47 |
Msa0491980 | Msa1438160 | 0.815648 | 8.300755e-52 | -8.615850e-47 |
Msa0493870 | Msa1438160 | 0.867702 | 1.126131e-65 | -8.615850e-47 |
Msa0497680 | Msa1438160 | 0.844846 | 5.869196e-59 | -8.615850e-47 |
Msa0497690 | Msa1438160 | 0.842180 | 3.026367e-58 | -8.615850e-47 |
Msa0497860 | Msa1438160 | 0.855395 | 6.495399e-62 | -8.615850e-47 |
Msa0500440 | Msa1438160 | 0.824806 | 6.609812e-54 | -8.615850e-47 |
Msa0500770 | Msa1438160 | 0.809939 | 1.476809e-50 | -8.615850e-47 |
Msa0500910 | Msa1438160 | 0.831268 | 1.837645e-55 | -8.615850e-47 |
Msa0508160 | Msa1438160 | 0.831789 | 1.367678e-55 | -8.615850e-47 |
Msa0510870 | Msa1438160 | 0.852207 | 5.372435e-61 | -8.615850e-47 |
Msa0512280 | Msa1438160 | 0.815868 | 7.413852e-52 | -8.615850e-47 |
Msa0513670 | Msa1438160 | 0.817177 | 3.774669e-52 | -8.615850e-47 |
Msa0518490 | Msa1438160 | 0.831250 | 1.857121e-55 | -8.615850e-47 |
Msa0522140 | Msa1438160 | 0.854720 | 1.019966e-61 | -8.615850e-47 |
Msa0522170 | Msa1438160 | 0.863590 | 2.232858e-64 | -8.615850e-47 |
Msa0523080 | Msa1438160 | 0.835478 | 1.638996e-56 | -8.615850e-47 |
Msa0524710 | Msa1438160 | 0.801880 | 7.308735e-49 | -8.615850e-47 |
Msa0531050 | Msa1438160 | 0.818838 | 1.590681e-52 | -8.615850e-47 |
Msa0531800 | Msa1438160 | 0.803302 | 3.718826e-49 | -8.615850e-47 |
Msa0534270 | Msa1438160 | 0.801091 | 1.060454e-48 | -8.615850e-47 |
Msa0534610 | Msa1438160 | 0.842031 | 3.313528e-58 | -8.615850e-47 |
Msa0548790 | Msa1438160 | 0.835169 | 1.961945e-56 | -8.615850e-47 |
Msa0550980 | Msa1438160 | -0.815627 | 8.391668e-52 | -8.615850e-47 |
Msa0556270 | Msa1438160 | 0.852485 | 4.474790e-61 | -8.615850e-47 |
Msa0557240 | Msa1438160 | 0.848255 | 6.887010e-60 | -8.615850e-47 |
Msa0557250 | Msa1438160 | 0.815671 | 8.203367e-52 | -8.615850e-47 |
Msa0558510 | Msa1438160 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
Msa0561830 | Msa1438160 | 0.818332 | 2.071278e-52 | -8.615850e-47 |
Msa0565120 | Msa1438160 | 0.831742 | 1.405144e-55 | -8.615850e-47 |
Msa0565180 | Msa1438160 | 0.838205 | 3.302844e-57 | -8.615850e-47 |
Msa0566530 | Msa1438160 | 0.815367 | 9.584953e-52 | -8.615850e-47 |
Msa0568110 | Msa1438160 | 0.877767 | 4.825539e-69 | -8.615850e-47 |
Msa0570460 | Msa1438160 | 0.878205 | 3.391105e-69 | -8.615850e-47 |
Msa0572700 | Msa1438160 | 0.836915 | 7.071960e-57 | -8.615850e-47 |
Msa0574420 | Msa1438160 | 0.815978 | 7.006248e-52 | -8.615850e-47 |
Msa0580840 | Msa1438160 | 0.871939 | 4.660531e-67 | -8.615850e-47 |
Msa0588040 | Msa1438160 | 0.851281 | 9.831594e-61 | -8.615850e-47 |
Msa0588730 | Msa1438160 | 0.845992 | 2.873541e-59 | -8.615850e-47 |
Msa0589000 | Msa1438160 | 0.850787 | 1.354672e-60 | -8.615850e-47 |
Msa0589060 | Msa1438160 | 0.841423 | 4.795848e-58 | -8.615850e-47 |
Msa0590810 | Msa1438160 | 0.846870 | 1.654790e-59 | -8.615850e-47 |
Msa0597170 | Msa1438160 | 0.853610 | 2.133128e-61 | -8.615850e-47 |
Msa0597180 | Msa1438160 | 0.814733 | 1.325372e-51 | -8.615850e-47 |
Msa0597370 | Msa1438160 | -0.808241 | 3.410967e-50 | -8.615850e-47 |
Msa0597800 | Msa1438160 | 0.803522 | 3.349415e-49 | -8.615850e-47 |
Msa0597820 | Msa1438160 | 0.819541 | 1.100258e-52 | -8.615850e-47 |
Msa0843950 | Msa1438160 | 0.814007 | 1.917665e-51 | -8.615850e-47 |
Msa0848020 | Msa1438160 | 0.839677 | 1.373193e-57 | -8.615850e-47 |
Msa0850480 | Msa1438160 | 0.853098 | 2.991142e-61 | -8.615850e-47 |
Msa0855260 | Msa1438160 | 0.818478 | 1.919444e-52 | -8.615850e-47 |
Msa0859040 | Msa1438160 | 0.862165 | 6.148569e-64 | -8.615850e-47 |
Msa0865810 | Msa1438160 | 0.829205 | 5.865248e-55 | -8.615850e-47 |
Msa0865820 | Msa1438160 | 0.844532 | 7.132966e-59 | -8.615850e-47 |
Msa0865830 | Msa1438160 | 0.865595 | 5.269582e-65 | -8.615850e-47 |
Msa0874750 | Msa1438160 | 0.845859 | 3.123072e-59 | -8.615850e-47 |
Msa0881510 | Msa1438160 | 0.847258 | 1.295693e-59 | -8.615850e-47 |
Msa0901270 | Msa1438160 | 0.802492 | 5.467266e-49 | -8.615850e-47 |
Msa0906680 | Msa1438160 | 0.808865 | 2.510347e-50 | -8.615850e-47 |
Msa0910560 | Msa1438160 | 0.812947 | 3.280926e-51 | -8.615850e-47 |
Msa0921790 | Msa1438160 | 0.849503 | 3.101161e-60 | -8.615850e-47 |
Msa0925940 | Msa1438160 | 0.857782 | 1.290693e-62 | -8.615850e-47 |
Msa0945320 | Msa1438160 | 0.807056 | 6.091453e-50 | -8.615850e-47 |
Msa0945330 | Msa1438160 | 0.818433 | 1.965352e-52 | -8.615850e-47 |
Msa0960580 | Msa1438160 | 0.847691 | 9.851652e-60 | -8.615850e-47 |
Msa0966580 | Msa1438160 | 0.803781 | 2.958847e-49 | -8.615850e-47 |
Msa0968990 | Msa1438160 | 0.828226 | 1.011348e-54 | -8.615850e-47 |
Msa0975950 | Msa1438160 | 0.810846 | 9.409023e-51 | -8.615850e-47 |
Msa0976400 | Msa1438160 | 0.841192 | 5.514239e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438160 | MtrunA17_Chr1g0188451 | 94.276 | 297 | 5 | 1 | 16 | 312 | 5 | 289 | 0.0 | 573 |
Msa1438160 | MtrunA17_Chr6g0477101 | 70.609 | 279 | 67 | 4 | 36 | 312 | 1 | 266 | 3.88e-143 | 404 |
Msa1438160 | MtrunA17_Chr6g0464111 | 70.886 | 158 | 33 | 2 | 156 | 312 | 1 | 146 | 2.29e-76 | 230 |
Msa1438160 | MtrunA17_Chr6g0464101 | 88.571 | 35 | 4 | 0 | 111 | 145 | 35 | 69 | 4.68e-14 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438160 | AT4G15093.1 | 61.423 | 267 | 87 | 4 | 38 | 300 | 4 | 258 | 1.25e-119 | 345 |
Find 85 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCTCTGGCATTTGATTCC+TGG | 0.223358 | tig0028517:-11873 | Msa1438160:CDS |
CGCTTCAATATTCTACATTA+AGG | 0.243705 | tig0028517:-13060 | Msa1438160:CDS |
GTGATTTATGTCCTCGTATC+TGG | 0.279043 | tig0028517:+11608 | None:intergenic |
TTCTTGTTATCTCTGGTCAT+TGG | 0.280377 | tig0028517:-12862 | Msa1438160:CDS |
TGCAGGAATTGTTTCATCTA+TGG | 0.287643 | tig0028517:+12937 | None:intergenic |
CTTCCCATTGCATGTGGCTA+TGG | 0.326906 | tig0028517:-11532 | Msa1438160:CDS |
CCCTCCTCCTCCCTGGGCTC+TGG | 0.327725 | tig0028517:-11887 | Msa1438160:CDS |
TCTTGTTATCTCTGGTCATT+GGG | 0.336206 | tig0028517:-12861 | Msa1438160:CDS |
TTCACCCTCTTTGCTAACTT+TGG | 0.341100 | tig0028517:+12171 | None:intergenic |
AACTTTGGAGCCCCTGGTGC+TGG | 0.357532 | tig0028517:+12186 | None:intergenic |
ATTGTGATTAACAACGTTAA+CGG | 0.372671 | tig0028517:+12823 | None:intergenic |
CATGTTATGAGTGGCACTTC+CGG | 0.373240 | tig0028517:+11933 | None:intergenic |
GAGAAAGCCCTCCTCCTCCC+TGG | 0.379390 | tig0028517:-11894 | Msa1438160:CDS |
GATGAGGGTGTTCTAATAAT+CGG | 0.388648 | tig0028517:-11958 | Msa1438160:CDS |
TTTGCTAACTTTGGAGCCCC+TGG | 0.388909 | tig0028517:+12180 | None:intergenic |
AAGGAACTGATCGAAGCATC+TGG | 0.408387 | tig0028517:-12150 | Msa1438160:CDS |
GCCAGAGCCCAGGGAGGAGG+AGG | 0.408526 | tig0028517:+11886 | None:intergenic |
AATGAAACCATCCATGATTT+CGG | 0.409867 | tig0028517:-12803 | Msa1438160:CDS |
TCTGCCATTCTTGTTATCTC+TGG | 0.410290 | tig0028517:-12869 | Msa1438160:CDS |
TATACCAGTATGTCAACTTT+CGG | 0.414509 | tig0028517:-12043 | Msa1438160:CDS |
TCGGTTTCATCAAATAGAAA+TGG | 0.415828 | tig0028517:-12024 | Msa1438160:CDS |
AGAACACCCTCATCTTTAAG+AGG | 0.426483 | tig0028517:+11967 | None:intergenic |
TTCCCATTGCATGTGGCTAT+GGG | 0.428707 | tig0028517:-11531 | Msa1438160:CDS |
GGTACTTACCATTATAACTT+AGG | 0.430513 | tig0028517:-12003 | Msa1438160:CDS |
GGATGAGCCACTTTCGCATA+TGG | 0.439113 | tig0028517:+11570 | None:intergenic |
CATGGAAATTCTTGACATCA+TGG | 0.450298 | tig0028517:-12916 | Msa1438160:CDS |
CAAGGTTATTCATGAGAGTT+GGG | 0.452153 | tig0028517:-11484 | Msa1438160:CDS |
ATGATTTCGGTGGCTTTCCT+AGG | 0.454213 | tig0028517:-12790 | Msa1438160:CDS |
ACTCATAACATGAGAGCAAT+TGG | 0.455156 | tig0028517:-11922 | Msa1438160:CDS |
CCAAGGTTATTCATGAGAGT+TGG | 0.456924 | tig0028517:-11485 | Msa1438160:CDS |
ATTCATGAGAGTTGGGATAG+TGG | 0.458572 | tig0028517:-11477 | Msa1438160:CDS |
TGATTAACAACGTTAACGGT+TGG | 0.472085 | tig0028517:+12827 | None:intergenic |
TAGGAAAGCCACCGAAATCA+TGG | 0.473235 | tig0028517:+12792 | None:intergenic |
CTTTCCTAGGAGCATGTACA+AGG | 0.474154 | tig0028517:-12777 | Msa1438160:intron |
GAAACCGAAAGTTGACATAC+TGG | 0.474557 | tig0028517:+12039 | None:intergenic |
TGCAATGGGAAGAAATGATC+AGG | 0.474579 | tig0028517:+11543 | None:intergenic |
AGAAAGCCCTCCTCCTCCCT+GGG | 0.482352 | tig0028517:-11893 | Msa1438160:CDS |
CAGCTCAAGTATCCAGCACC+AGG | 0.488701 | tig0028517:-12198 | Msa1438160:CDS |
GGAATCAAATGCCAGAGCCC+AGG | 0.488956 | tig0028517:+11876 | None:intergenic |
CAAACCTTGTACATGCTCCT+AGG | 0.492861 | tig0028517:+12773 | None:intergenic |
CTCCCATAGCCACATGCAAT+GGG | 0.493902 | tig0028517:+11529 | None:intergenic |
AATGCCAGAGCCCAGGGAGG+AGG | 0.498803 | tig0028517:+11883 | None:intergenic |
AGAATGGCAGATGGTCTCTC+AGG | 0.511823 | tig0028517:+12881 | None:intergenic |
GCTCCCATAGCCACATGCAA+TGG | 0.521180 | tig0028517:+11528 | None:intergenic |
CATGTGGCTATGGGAGCTGC+TGG | 0.535183 | tig0028517:-11522 | Msa1438160:CDS |
CATACTGGTATATCAGCCTC+TGG | 0.544796 | tig0028517:+12054 | None:intergenic |
GGCTCCAAAGTTAGCAAAGA+GGG | 0.544809 | tig0028517:-12175 | Msa1438160:CDS |
GGTGTTCTAATAATCGGATC+CGG | 0.552606 | tig0028517:-11952 | Msa1438160:CDS |
CCAACTCTCATGAATAACCT+TGG | 0.556818 | tig0028517:+11485 | None:intergenic |
AAGAATCTCTCGTCGAAGGA+AGG | 0.559361 | tig0028517:-11846 | Msa1438160:intron |
TCATTTCTTCCCATTGCATG+TGG | 0.560813 | tig0028517:-11538 | Msa1438160:CDS |
ATTCTTGACATCATGGAAAG+AGG | 0.565403 | tig0028517:-12909 | Msa1438160:CDS |
GAAGGCGCCATATGCGAAAG+TGG | 0.568307 | tig0028517:-11577 | Msa1438160:CDS |
ATGACCAGAGATAACAAGAA+TGG | 0.569073 | tig0028517:+12865 | None:intergenic |
GTTTCATCTATGGCTAGTGT+TGG | 0.573056 | tig0028517:+12947 | None:intergenic |
ATGCGAAAGTGGCTCATCCA+TGG | 0.576625 | tig0028517:-11566 | Msa1438160:CDS |
GGAGGAGGAGGGCTTTCTCG+AGG | 0.577926 | tig0028517:+11898 | None:intergenic |
AGCATCTGGGTTGAGTCGAG+TGG | 0.579096 | tig0028517:-12136 | Msa1438160:CDS |
AATAGCTCCTCTTAAAGATG+AGG | 0.581989 | tig0028517:-11974 | Msa1438160:CDS |
GATGTCAAGAATTTCCATGC+AGG | 0.582906 | tig0028517:+12920 | None:intergenic |
AGCTGCTGTGAAACCAAAAG+AGG | 0.584042 | tig0028517:+11440 | None:intergenic |
GAATCAAATGCCAGAGCCCA+GGG | 0.587952 | tig0028517:+11877 | None:intergenic |
TGGTGAGAATTCAAAGGCCA+AGG | 0.591154 | tig0028517:-11502 | Msa1438160:CDS |
GGGAAGAAATGATCAGGCCA+TGG | 0.597088 | tig0028517:+11549 | None:intergenic |
CATAAATCACTACGAAGAGA+AGG | 0.601560 | tig0028517:-11595 | Msa1438160:CDS |
CCAGAGCCCAGGGAGGAGGA+GGG | 0.604544 | tig0028517:+11887 | None:intergenic |
AGGAACTGATCGAAGCATCT+GGG | 0.606798 | tig0028517:-12149 | Msa1438160:CDS |
AAAGTTAGCAAAGAGGGTGA+AGG | 0.608328 | tig0028517:-12169 | Msa1438160:CDS |
TTAAAAGAATCTCTCGTCGA+AGG | 0.612211 | tig0028517:-11850 | Msa1438160:CDS |
GAAACCATCCATGATTTCGG+TGG | 0.621697 | tig0028517:-12800 | Msa1438160:CDS |
ATAGCTCCTCTTAAAGATGA+GGG | 0.624747 | tig0028517:-11973 | Msa1438160:CDS |
TAGATGAAACAATTCCTGCA+TGG | 0.625784 | tig0028517:-12934 | Msa1438160:CDS |
AGCTGCTGGTGAGAATTCAA+AGG | 0.626345 | tig0028517:-11508 | Msa1438160:CDS |
TGCTCAATGTTCCAGATACG+AGG | 0.635008 | tig0028517:-11619 | Msa1438160:CDS |
GTGGGCTTGATCATGGAACA+TGG | 0.640571 | tig0028517:-12098 | Msa1438160:CDS |
GCTCAAGTATCCAGCACCAG+GGG | 0.654006 | tig0028517:-12196 | Msa1438160:CDS |
AAAGCCACCGAAATCATGGA+TGG | 0.655429 | tig0028517:+12796 | None:intergenic |
AGCTCAAGTATCCAGCACCA+GGG | 0.658115 | tig0028517:-12197 | Msa1438160:CDS |
GAGATAACAAGAATGGCAGA+TGG | 0.658261 | tig0028517:+12872 | None:intergenic |
AATTGCTCTCATGTTATGAG+TGG | 0.665609 | tig0028517:+11924 | None:intergenic |
TCTCATGTTGATGTATCCAG+AGG | 0.674561 | tig0028517:-12070 | Msa1438160:CDS |
TCTGGATACATCAACATGAG+AGG | 0.675165 | tig0028517:+12072 | None:intergenic |
GGGCTCCAAAGTTAGCAAAG+AGG | 0.677936 | tig0028517:-12176 | Msa1438160:CDS |
TGGGCTTGATCATGGAACAT+GGG | 0.724784 | tig0028517:-12097 | Msa1438160:CDS |
TCAAATGCCAGAGCCCAGGG+AGG | 0.758664 | tig0028517:+11880 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATGTAATTCATTTTATA+TGG | + | tig0028517:11471-11490 | None:intergenic | 10.0% |
!!! | AATATGTAATTCATTTTATA+TGG | + | tig0028517:11471-11490 | None:intergenic | 10.0% |
!! | AGATAGATATAAAACAAAAA+TGG | + | tig0028517:12327-12346 | None:intergenic | 15.0% |
!! | AGATAGATATAAAACAAAAA+TGG | + | tig0028517:12327-12346 | None:intergenic | 15.0% |
!!! | TCACTTTTTTTCTTGTATTT+TGG | + | tig0028517:11536-11555 | None:intergenic | 20.0% |
!!! | AAGCAAAAGTATACAAAAAA+TGG | - | tig0028517:11563-11582 | Msa1438160:CDS | 20.0% |
!! | CAAGATTTATTCCATTAAAT+GGG | + | tig0028517:11966-11985 | None:intergenic | 20.0% |
!!! | GCTACAATTTCTTAATTTTT+CGG | + | tig0028517:12026-12045 | None:intergenic | 20.0% |
!!! | TCACTTTTTTTCTTGTATTT+TGG | + | tig0028517:11536-11555 | None:intergenic | 20.0% |
!!! | AAGCAAAAGTATACAAAAAA+TGG | - | tig0028517:11563-11582 | Msa1438160:CDS | 20.0% |
!! | CAAGATTTATTCCATTAAAT+GGG | + | tig0028517:11966-11985 | None:intergenic | 20.0% |
!!! | GCTACAATTTCTTAATTTTT+CGG | + | tig0028517:12026-12045 | None:intergenic | 20.0% |
!! | TATACAAAAAATGGCATTGA+AGG | - | tig0028517:11572-11591 | Msa1438160:CDS | 25.0% |
! | ATTGTGATTAACAACGTTAA+CGG | + | tig0028517:11748-11767 | None:intergenic | 25.0% |
! | ATTACATCTTGAAATTTGAG+CGG | - | tig0028517:11892-11911 | Msa1438160:CDS | 25.0% |
! | TTTATTCCATTAAATGGGAT+CGG | + | tig0028517:11961-11980 | None:intergenic | 25.0% |
! | CCAAGATTTATTCCATTAAA+TGG | + | tig0028517:11967-11986 | None:intergenic | 25.0% |
! | CCATTTAATGGAATAAATCT+TGG | - | tig0028517:11964-11983 | Msa1438160:CDS | 25.0% |
! | AAGAAATTGTAGCAATAGAT+TGG | - | tig0028517:12033-12052 | Msa1438160:CDS | 25.0% |
! | ATATGCATACATTACACATT+AGG | - | tig0028517:12088-12107 | Msa1438160:CDS | 25.0% |
! | GGAATCTGAATTAAACAATT+AGG | + | tig0028517:12171-12190 | None:intergenic | 25.0% |
!!! | TTGCTTTTCCTAAGTTATAA+TGG | + | tig0028517:12576-12595 | None:intergenic | 25.0% |
!! | TATACAAAAAATGGCATTGA+AGG | - | tig0028517:11572-11591 | Msa1438160:CDS | 25.0% |
! | ATTGTGATTAACAACGTTAA+CGG | + | tig0028517:11748-11767 | None:intergenic | 25.0% |
! | ATTACATCTTGAAATTTGAG+CGG | - | tig0028517:11892-11911 | Msa1438160:CDS | 25.0% |
! | TTTATTCCATTAAATGGGAT+CGG | + | tig0028517:11961-11980 | None:intergenic | 25.0% |
! | CCAAGATTTATTCCATTAAA+TGG | + | tig0028517:11967-11986 | None:intergenic | 25.0% |
! | CCATTTAATGGAATAAATCT+TGG | - | tig0028517:11964-11983 | Msa1438160:CDS | 25.0% |
! | AAGAAATTGTAGCAATAGAT+TGG | - | tig0028517:12033-12052 | Msa1438160:CDS | 25.0% |
! | ATATGCATACATTACACATT+AGG | - | tig0028517:12088-12107 | Msa1438160:CDS | 25.0% |
! | GGAATCTGAATTAAACAATT+AGG | + | tig0028517:12171-12190 | None:intergenic | 25.0% |
!!! | TTGCTTTTCCTAAGTTATAA+TGG | + | tig0028517:12576-12595 | None:intergenic | 25.0% |
! | CATTTTATATGGTGACAGAA+TGG | + | tig0028517:11460-11479 | None:intergenic | 30.0% |
CGCTTCAATATTCTACATTA+AGG | - | tig0028517:11508-11527 | Msa1438160:CDS | 30.0% | |
! | GAAACGTTTTACATATCACA+TGG | - | tig0028517:11594-11613 | Msa1438160:CDS | 30.0% |
AATGAAACCATCCATGATTT+CGG | - | tig0028517:11765-11784 | Msa1438160:intron | 30.0% | |
GATTGGATAAACAAACATTG+AGG | - | tig0028517:12050-12069 | Msa1438160:CDS | 30.0% | |
CTATTGAATCATAACTGATC+CGG | - | tig0028517:12131-12150 | Msa1438160:CDS | 30.0% | |
TATTGAATCATAACTGATCC+GGG | - | tig0028517:12132-12151 | Msa1438160:CDS | 30.0% | |
TTAATTCAGATTCCGAACTT+TGG | - | tig0028517:12177-12196 | Msa1438160:CDS | 30.0% | |
!!! | TTTCGGTATCGATTTGTTTT+TGG | - | tig0028517:12224-12243 | Msa1438160:intron | 30.0% |
TAGCTCTTCAATTGATACTT+AGG | + | tig0028517:12264-12283 | None:intergenic | 30.0% | |
AAAACAAAAATGGACCATTG+TGG | + | tig0028517:12317-12336 | None:intergenic | 30.0% | |
TATACCAGTATGTCAACTTT+CGG | - | tig0028517:12525-12544 | Msa1438160:intron | 30.0% | |
TCGGTTTCATCAAATAGAAA+TGG | - | tig0028517:12544-12563 | Msa1438160:intron | 30.0% | |
GGTACTTACCATTATAACTT+AGG | - | tig0028517:12565-12584 | Msa1438160:intron | 30.0% | |
!! | ATAGTTGCTATTTGACAACA+TGG | + | tig0028517:12791-12810 | None:intergenic | 30.0% |
! | CATTTTATATGGTGACAGAA+TGG | + | tig0028517:11460-11479 | None:intergenic | 30.0% |
CGCTTCAATATTCTACATTA+AGG | - | tig0028517:11508-11527 | Msa1438160:CDS | 30.0% | |
! | GAAACGTTTTACATATCACA+TGG | - | tig0028517:11594-11613 | Msa1438160:CDS | 30.0% |
AATGAAACCATCCATGATTT+CGG | - | tig0028517:11765-11784 | Msa1438160:intron | 30.0% | |
GATTGGATAAACAAACATTG+AGG | - | tig0028517:12050-12069 | Msa1438160:CDS | 30.0% | |
CTATTGAATCATAACTGATC+CGG | - | tig0028517:12131-12150 | Msa1438160:CDS | 30.0% | |
TATTGAATCATAACTGATCC+GGG | - | tig0028517:12132-12151 | Msa1438160:CDS | 30.0% | |
TTAATTCAGATTCCGAACTT+TGG | - | tig0028517:12177-12196 | Msa1438160:CDS | 30.0% | |
!!! | TTTCGGTATCGATTTGTTTT+TGG | - | tig0028517:12224-12243 | Msa1438160:intron | 30.0% |
TAGCTCTTCAATTGATACTT+AGG | + | tig0028517:12264-12283 | None:intergenic | 30.0% | |
AAAACAAAAATGGACCATTG+TGG | + | tig0028517:12317-12336 | None:intergenic | 30.0% | |
TATACCAGTATGTCAACTTT+CGG | - | tig0028517:12525-12544 | Msa1438160:intron | 30.0% | |
TCGGTTTCATCAAATAGAAA+TGG | - | tig0028517:12544-12563 | Msa1438160:intron | 30.0% | |
GGTACTTACCATTATAACTT+AGG | - | tig0028517:12565-12584 | Msa1438160:intron | 30.0% | |
!! | ATAGTTGCTATTTGACAACA+TGG | + | tig0028517:12791-12810 | None:intergenic | 30.0% |
TGCAGGAATTGTTTCATCTA+TGG | + | tig0028517:11634-11653 | None:intergenic | 35.0% | |
TAGATGAAACAATTCCTGCA+TGG | - | tig0028517:11634-11653 | Msa1438160:CDS | 35.0% | |
CATGGAAATTCTTGACATCA+TGG | - | tig0028517:11652-11671 | Msa1438160:intron | 35.0% | |
ATTCTTGACATCATGGAAAG+AGG | - | tig0028517:11659-11678 | Msa1438160:intron | 35.0% | |
ATGACCAGAGATAACAAGAA+TGG | + | tig0028517:11706-11725 | None:intergenic | 35.0% | |
! | TTCTTGTTATCTCTGGTCAT+TGG | - | tig0028517:11706-11725 | Msa1438160:intron | 35.0% |
! | TCTTGTTATCTCTGGTCATT+GGG | - | tig0028517:11707-11726 | Msa1438160:intron | 35.0% |
TGATTAACAACGTTAACGGT+TGG | + | tig0028517:11744-11763 | None:intergenic | 35.0% | |
TTTCGGTTCTCAAACAGATT+TGG | + | tig0028517:12009-12028 | None:intergenic | 35.0% | |
GCATACATTACACATTAGGT+TGG | - | tig0028517:12092-12111 | Msa1438160:CDS | 35.0% | |
GAAACTAGAGTCCAATCATT+CGG | + | tig0028517:12208-12227 | None:intergenic | 35.0% | |
! | GAATGATTGGACTCTAGTTT+CGG | - | tig0028517:12207-12226 | Msa1438160:intron | 35.0% |
GATACTTGAGCTGCAAATAA+AGG | + | tig0028517:12363-12382 | None:intergenic | 35.0% | |
TGGACGAAGATAAAAAACGT+GGG | - | tig0028517:12452-12471 | Msa1438160:intron | 35.0% | |
AATAGCTCCTCTTAAAGATG+AGG | - | tig0028517:12594-12613 | Msa1438160:intron | 35.0% | |
ATAGCTCCTCTTAAAGATGA+GGG | - | tig0028517:12595-12614 | Msa1438160:intron | 35.0% | |
!! | GATGAGGGTGTTCTAATAAT+CGG | - | tig0028517:12610-12629 | Msa1438160:intron | 35.0% |
AATTGCTCTCATGTTATGAG+TGG | + | tig0028517:12647-12666 | None:intergenic | 35.0% | |
ACTCATAACATGAGAGCAAT+TGG | - | tig0028517:12646-12665 | Msa1438160:intron | 35.0% | |
TTAAAAGAATCTCTCGTCGA+AGG | - | tig0028517:12718-12737 | Msa1438160:intron | 35.0% | |
AAATAGCAACTATAGCGTAG+TGG | - | tig0028517:12798-12817 | Msa1438160:CDS | 35.0% | |
TTGTTCTGTGATACGTGATT+TGG | - | tig0028517:12839-12858 | Msa1438160:CDS | 35.0% | |
CATAAATCACTACGAAGAGA+AGG | - | tig0028517:12973-12992 | Msa1438160:CDS | 35.0% | |
CAAGGTTATTCATGAGAGTT+GGG | - | tig0028517:13084-13103 | Msa1438160:CDS | 35.0% | |
!! | GCTTTTTCTTATGCCTCTTT+TGG | - | tig0028517:13115-13134 | Msa1438160:five_prime_UTR | 35.0% |
TGCAGGAATTGTTTCATCTA+TGG | + | tig0028517:11634-11653 | None:intergenic | 35.0% | |
TAGATGAAACAATTCCTGCA+TGG | - | tig0028517:11634-11653 | Msa1438160:CDS | 35.0% | |
CATGGAAATTCTTGACATCA+TGG | - | tig0028517:11652-11671 | Msa1438160:intron | 35.0% | |
ATTCTTGACATCATGGAAAG+AGG | - | tig0028517:11659-11678 | Msa1438160:intron | 35.0% | |
ATGACCAGAGATAACAAGAA+TGG | + | tig0028517:11706-11725 | None:intergenic | 35.0% | |
! | TTCTTGTTATCTCTGGTCAT+TGG | - | tig0028517:11706-11725 | Msa1438160:intron | 35.0% |
! | TCTTGTTATCTCTGGTCATT+GGG | - | tig0028517:11707-11726 | Msa1438160:intron | 35.0% |
TGATTAACAACGTTAACGGT+TGG | + | tig0028517:11744-11763 | None:intergenic | 35.0% | |
TTTCGGTTCTCAAACAGATT+TGG | + | tig0028517:12009-12028 | None:intergenic | 35.0% | |
GCATACATTACACATTAGGT+TGG | - | tig0028517:12092-12111 | Msa1438160:CDS | 35.0% | |
GAAACTAGAGTCCAATCATT+CGG | + | tig0028517:12208-12227 | None:intergenic | 35.0% | |
! | GAATGATTGGACTCTAGTTT+CGG | - | tig0028517:12207-12226 | Msa1438160:intron | 35.0% |
GATACTTGAGCTGCAAATAA+AGG | + | tig0028517:12363-12382 | None:intergenic | 35.0% | |
TGGACGAAGATAAAAAACGT+GGG | - | tig0028517:12452-12471 | Msa1438160:intron | 35.0% | |
AATAGCTCCTCTTAAAGATG+AGG | - | tig0028517:12594-12613 | Msa1438160:intron | 35.0% | |
ATAGCTCCTCTTAAAGATGA+GGG | - | tig0028517:12595-12614 | Msa1438160:intron | 35.0% | |
!! | GATGAGGGTGTTCTAATAAT+CGG | - | tig0028517:12610-12629 | Msa1438160:intron | 35.0% |
AATTGCTCTCATGTTATGAG+TGG | + | tig0028517:12647-12666 | None:intergenic | 35.0% | |
ACTCATAACATGAGAGCAAT+TGG | - | tig0028517:12646-12665 | Msa1438160:intron | 35.0% | |
TTAAAAGAATCTCTCGTCGA+AGG | - | tig0028517:12718-12737 | Msa1438160:intron | 35.0% | |
AAATAGCAACTATAGCGTAG+TGG | - | tig0028517:12798-12817 | Msa1438160:CDS | 35.0% | |
TTGTTCTGTGATACGTGATT+TGG | - | tig0028517:12839-12858 | Msa1438160:CDS | 35.0% | |
CATAAATCACTACGAAGAGA+AGG | - | tig0028517:12973-12992 | Msa1438160:CDS | 35.0% | |
CAAGGTTATTCATGAGAGTT+GGG | - | tig0028517:13084-13103 | Msa1438160:CDS | 35.0% | |
!! | GCTTTTTCTTATGCCTCTTT+TGG | - | tig0028517:13115-13134 | Msa1438160:five_prime_UTR | 35.0% |
GTTTCATCTATGGCTAGTGT+TGG | + | tig0028517:11624-11643 | None:intergenic | 40.0% | |
GATGTCAAGAATTTCCATGC+AGG | + | tig0028517:11651-11670 | None:intergenic | 40.0% | |
GAGATAACAAGAATGGCAGA+TGG | + | tig0028517:11699-11718 | None:intergenic | 40.0% | |
! | TCTGCCATTCTTGTTATCTC+TGG | - | tig0028517:11699-11718 | Msa1438160:intron | 40.0% |
AATAAATCTTGGTTGTGCGC+TGG | - | tig0028517:11975-11994 | Msa1438160:CDS | 40.0% | |
! | GTTTTCCAATCTCTCCACAA+TGG | - | tig0028517:12300-12319 | Msa1438160:intron | 40.0% |
TGAGCTGCAAATAAAGGAAC+AGG | + | tig0028517:12357-12376 | None:intergenic | 40.0% | |
TTCACCCTCTTTGCTAACTT+TGG | + | tig0028517:12400-12419 | None:intergenic | 40.0% | |
AAAGTTAGCAAAGAGGGTGA+AGG | - | tig0028517:12399-12418 | Msa1438160:intron | 40.0% | |
GTGGACGAAGATAAAAAACG+TGG | - | tig0028517:12451-12470 | Msa1438160:intron | 40.0% | |
AAAAAACGTGGGCTTGATCA+TGG | - | tig0028517:12463-12482 | Msa1438160:intron | 40.0% | |
TCTGGATACATCAACATGAG+AGG | + | tig0028517:12499-12518 | None:intergenic | 40.0% | |
TCTCATGTTGATGTATCCAG+AGG | - | tig0028517:12498-12517 | Msa1438160:intron | 40.0% | |
GAAACCGAAAGTTGACATAC+TGG | + | tig0028517:12532-12551 | None:intergenic | 40.0% | |
AGAACACCCTCATCTTTAAG+AGG | + | tig0028517:12604-12623 | None:intergenic | 40.0% | |
GGTGTTCTAATAATCGGATC+CGG | - | tig0028517:12616-12635 | Msa1438160:intron | 40.0% | |
! | GACGAGAGATTCTTTTAACC+AGG | + | tig0028517:12716-12735 | None:intergenic | 40.0% |
GTGATTTATGTCCTCGTATC+TGG | + | tig0028517:12963-12982 | None:intergenic | 40.0% | |
TGCAATGGGAAGAAATGATC+AGG | + | tig0028517:13028-13047 | None:intergenic | 40.0% | |
TCATTTCTTCCCATTGCATG+TGG | - | tig0028517:13030-13049 | Msa1438160:CDS | 40.0% | |
CCAACTCTCATGAATAACCT+TGG | + | tig0028517:13086-13105 | None:intergenic | 40.0% | |
CCAAGGTTATTCATGAGAGT+TGG | - | tig0028517:13083-13102 | Msa1438160:CDS | 40.0% | |
ATTCATGAGAGTTGGGATAG+TGG | - | tig0028517:13091-13110 | Msa1438160:CDS | 40.0% | |
GTTTCATCTATGGCTAGTGT+TGG | + | tig0028517:11624-11643 | None:intergenic | 40.0% | |
GATGTCAAGAATTTCCATGC+AGG | + | tig0028517:11651-11670 | None:intergenic | 40.0% | |
GAGATAACAAGAATGGCAGA+TGG | + | tig0028517:11699-11718 | None:intergenic | 40.0% | |
! | TCTGCCATTCTTGTTATCTC+TGG | - | tig0028517:11699-11718 | Msa1438160:intron | 40.0% |
AATAAATCTTGGTTGTGCGC+TGG | - | tig0028517:11975-11994 | Msa1438160:CDS | 40.0% | |
! | GTTTTCCAATCTCTCCACAA+TGG | - | tig0028517:12300-12319 | Msa1438160:intron | 40.0% |
TGAGCTGCAAATAAAGGAAC+AGG | + | tig0028517:12357-12376 | None:intergenic | 40.0% | |
TTCACCCTCTTTGCTAACTT+TGG | + | tig0028517:12400-12419 | None:intergenic | 40.0% | |
AAAGTTAGCAAAGAGGGTGA+AGG | - | tig0028517:12399-12418 | Msa1438160:intron | 40.0% | |
GTGGACGAAGATAAAAAACG+TGG | - | tig0028517:12451-12470 | Msa1438160:intron | 40.0% | |
AAAAAACGTGGGCTTGATCA+TGG | - | tig0028517:12463-12482 | Msa1438160:intron | 40.0% | |
TCTGGATACATCAACATGAG+AGG | + | tig0028517:12499-12518 | None:intergenic | 40.0% | |
TCTCATGTTGATGTATCCAG+AGG | - | tig0028517:12498-12517 | Msa1438160:intron | 40.0% | |
GAAACCGAAAGTTGACATAC+TGG | + | tig0028517:12532-12551 | None:intergenic | 40.0% | |
AGAACACCCTCATCTTTAAG+AGG | + | tig0028517:12604-12623 | None:intergenic | 40.0% | |
GGTGTTCTAATAATCGGATC+CGG | - | tig0028517:12616-12635 | Msa1438160:intron | 40.0% | |
! | GACGAGAGATTCTTTTAACC+AGG | + | tig0028517:12716-12735 | None:intergenic | 40.0% |
GTGATTTATGTCCTCGTATC+TGG | + | tig0028517:12963-12982 | None:intergenic | 40.0% | |
TGCAATGGGAAGAAATGATC+AGG | + | tig0028517:13028-13047 | None:intergenic | 40.0% | |
TCATTTCTTCCCATTGCATG+TGG | - | tig0028517:13030-13049 | Msa1438160:CDS | 40.0% | |
CCAACTCTCATGAATAACCT+TGG | + | tig0028517:13086-13105 | None:intergenic | 40.0% | |
CCAAGGTTATTCATGAGAGT+TGG | - | tig0028517:13083-13102 | Msa1438160:CDS | 40.0% | |
ATTCATGAGAGTTGGGATAG+TGG | - | tig0028517:13091-13110 | Msa1438160:CDS | 40.0% | |
GAAACCATCCATGATTTCGG+TGG | - | tig0028517:11768-11787 | Msa1438160:intron | 45.0% | |
AAAGCCACCGAAATCATGGA+TGG | + | tig0028517:11775-11794 | None:intergenic | 45.0% | |
TAGGAAAGCCACCGAAATCA+TGG | + | tig0028517:11779-11798 | None:intergenic | 45.0% | |
ATGATTTCGGTGGCTTTCCT+AGG | - | tig0028517:11778-11797 | Msa1438160:intron | 45.0% | |
! | CTTTCCTAGGAGCATGTACA+AGG | - | tig0028517:11791-11810 | Msa1438160:intron | 45.0% |
CAAACCTTGTACATGCTCCT+AGG | + | tig0028517:11798-11817 | None:intergenic | 45.0% | |
GTGTAGCCGATCCCATTTAA+TGG | - | tig0028517:11952-11971 | Msa1438160:CDS | 45.0% | |
TTAGGCCATCTTTGCTTACC+CGG | + | tig0028517:12153-12172 | None:intergenic | 45.0% | |
! | CATTCGGTGGAACCAAAGTT+CGG | + | tig0028517:12192-12211 | None:intergenic | 45.0% |
! | CTTTGGTTCCACCGAATGAT+TGG | - | tig0028517:12194-12213 | Msa1438160:CDS | 45.0% |
ACTAGAGTCCAATCATTCGG+TGG | + | tig0028517:12205-12224 | None:intergenic | 45.0% | |
ATGGACCATTGTGGAGAGAT+TGG | + | tig0028517:12308-12327 | None:intergenic | 45.0% | |
GGCTCCAAAGTTAGCAAAGA+GGG | - | tig0028517:12393-12412 | Msa1438160:intron | 45.0% | |
! | AAGGAACTGATCGAAGCATC+TGG | - | tig0028517:12418-12437 | Msa1438160:intron | 45.0% |
! | AGGAACTGATCGAAGCATCT+GGG | - | tig0028517:12419-12438 | Msa1438160:intron | 45.0% |
TGGGCTTGATCATGGAACAT+GGG | - | tig0028517:12471-12490 | Msa1438160:intron | 45.0% | |
CATACTGGTATATCAGCCTC+TGG | + | tig0028517:12517-12536 | None:intergenic | 45.0% | |
CATGTTATGAGTGGCACTTC+CGG | + | tig0028517:12638-12657 | None:intergenic | 45.0% | |
AAGAATCTCTCGTCGAAGGA+AGG | - | tig0028517:12722-12741 | Msa1438160:intron | 45.0% | |
TGTTGTCAAACTGCAGCTAG+TGG | - | tig0028517:12869-12888 | Msa1438160:CDS | 45.0% | |
TGCTCAATGTTCCAGATACG+AGG | - | tig0028517:12949-12968 | Msa1438160:CDS | 45.0% | |
TTCCCATTGCATGTGGCTAT+GGG | - | tig0028517:13037-13056 | Msa1438160:CDS | 45.0% | |
AGCTGCTGGTGAGAATTCAA+AGG | - | tig0028517:13060-13079 | Msa1438160:CDS | 45.0% | |
TGGTGAGAATTCAAAGGCCA+AGG | - | tig0028517:13066-13085 | Msa1438160:CDS | 45.0% | |
AGCTGCTGTGAAACCAAAAG+AGG | + | tig0028517:13131-13150 | None:intergenic | 45.0% | |
GAAACCATCCATGATTTCGG+TGG | - | tig0028517:11768-11787 | Msa1438160:intron | 45.0% | |
AAAGCCACCGAAATCATGGA+TGG | + | tig0028517:11775-11794 | None:intergenic | 45.0% | |
TAGGAAAGCCACCGAAATCA+TGG | + | tig0028517:11779-11798 | None:intergenic | 45.0% | |
ATGATTTCGGTGGCTTTCCT+AGG | - | tig0028517:11778-11797 | Msa1438160:intron | 45.0% | |
! | CTTTCCTAGGAGCATGTACA+AGG | - | tig0028517:11791-11810 | Msa1438160:intron | 45.0% |
CAAACCTTGTACATGCTCCT+AGG | + | tig0028517:11798-11817 | None:intergenic | 45.0% | |
GTGTAGCCGATCCCATTTAA+TGG | - | tig0028517:11952-11971 | Msa1438160:CDS | 45.0% | |
TTAGGCCATCTTTGCTTACC+CGG | + | tig0028517:12153-12172 | None:intergenic | 45.0% | |
! | CATTCGGTGGAACCAAAGTT+CGG | + | tig0028517:12192-12211 | None:intergenic | 45.0% |
! | CTTTGGTTCCACCGAATGAT+TGG | - | tig0028517:12194-12213 | Msa1438160:CDS | 45.0% |
ACTAGAGTCCAATCATTCGG+TGG | + | tig0028517:12205-12224 | None:intergenic | 45.0% | |
ATGGACCATTGTGGAGAGAT+TGG | + | tig0028517:12308-12327 | None:intergenic | 45.0% | |
GGCTCCAAAGTTAGCAAAGA+GGG | - | tig0028517:12393-12412 | Msa1438160:intron | 45.0% | |
! | AAGGAACTGATCGAAGCATC+TGG | - | tig0028517:12418-12437 | Msa1438160:intron | 45.0% |
! | AGGAACTGATCGAAGCATCT+GGG | - | tig0028517:12419-12438 | Msa1438160:intron | 45.0% |
TGGGCTTGATCATGGAACAT+GGG | - | tig0028517:12471-12490 | Msa1438160:intron | 45.0% | |
CATACTGGTATATCAGCCTC+TGG | + | tig0028517:12517-12536 | None:intergenic | 45.0% | |
CATGTTATGAGTGGCACTTC+CGG | + | tig0028517:12638-12657 | None:intergenic | 45.0% | |
AAGAATCTCTCGTCGAAGGA+AGG | - | tig0028517:12722-12741 | Msa1438160:intron | 45.0% | |
TGTTGTCAAACTGCAGCTAG+TGG | - | tig0028517:12869-12888 | Msa1438160:CDS | 45.0% | |
TGCTCAATGTTCCAGATACG+AGG | - | tig0028517:12949-12968 | Msa1438160:CDS | 45.0% | |
TTCCCATTGCATGTGGCTAT+GGG | - | tig0028517:13037-13056 | Msa1438160:CDS | 45.0% | |
AGCTGCTGGTGAGAATTCAA+AGG | - | tig0028517:13060-13079 | Msa1438160:CDS | 45.0% | |
TGGTGAGAATTCAAAGGCCA+AGG | - | tig0028517:13066-13085 | Msa1438160:CDS | 45.0% | |
AGCTGCTGTGAAACCAAAAG+AGG | + | tig0028517:13131-13150 | None:intergenic | 45.0% | |
AGAATGGCAGATGGTCTCTC+AGG | + | tig0028517:11690-11709 | None:intergenic | 50.0% | |
CTGATCCGGGTAAGCAAAGA+TGG | - | tig0028517:12145-12164 | Msa1438160:CDS | 50.0% | |
AGCTCAAGTATCCAGCACCA+GGG | - | tig0028517:12371-12390 | Msa1438160:intron | 50.0% | |
!! | TTTGCTAACTTTGGAGCCCC+TGG | + | tig0028517:12391-12410 | None:intergenic | 50.0% |
GGGCTCCAAAGTTAGCAAAG+AGG | - | tig0028517:12392-12411 | Msa1438160:intron | 50.0% | |
GTGGGCTTGATCATGGAACA+TGG | - | tig0028517:12470-12489 | Msa1438160:intron | 50.0% | |
GAATCAAATGCCAGAGCCCA+GGG | + | tig0028517:12694-12713 | None:intergenic | 50.0% | |
! | GGATGAGCCACTTTCGCATA+TGG | + | tig0028517:13001-13020 | None:intergenic | 50.0% |
ATGCGAAAGTGGCTCATCCA+TGG | - | tig0028517:13002-13021 | Msa1438160:CDS | 50.0% | |
GGGAAGAAATGATCAGGCCA+TGG | + | tig0028517:13022-13041 | None:intergenic | 50.0% | |
CTTCCCATTGCATGTGGCTA+TGG | - | tig0028517:13036-13055 | Msa1438160:CDS | 50.0% | |
CTCCCATAGCCACATGCAAT+GGG | + | tig0028517:13042-13061 | None:intergenic | 50.0% | |
AGAATGGCAGATGGTCTCTC+AGG | + | tig0028517:11690-11709 | None:intergenic | 50.0% | |
CTGATCCGGGTAAGCAAAGA+TGG | - | tig0028517:12145-12164 | Msa1438160:CDS | 50.0% | |
AGCTCAAGTATCCAGCACCA+GGG | - | tig0028517:12371-12390 | Msa1438160:intron | 50.0% | |
!! | TTTGCTAACTTTGGAGCCCC+TGG | + | tig0028517:12391-12410 | None:intergenic | 50.0% |
GGGCTCCAAAGTTAGCAAAG+AGG | - | tig0028517:12392-12411 | Msa1438160:intron | 50.0% | |
GTGGGCTTGATCATGGAACA+TGG | - | tig0028517:12470-12489 | Msa1438160:intron | 50.0% | |
GAATCAAATGCCAGAGCCCA+GGG | + | tig0028517:12694-12713 | None:intergenic | 50.0% | |
! | GGATGAGCCACTTTCGCATA+TGG | + | tig0028517:13001-13020 | None:intergenic | 50.0% |
ATGCGAAAGTGGCTCATCCA+TGG | - | tig0028517:13002-13021 | Msa1438160:CDS | 50.0% | |
GGGAAGAAATGATCAGGCCA+TGG | + | tig0028517:13022-13041 | None:intergenic | 50.0% | |
CTTCCCATTGCATGTGGCTA+TGG | - | tig0028517:13036-13055 | Msa1438160:CDS | 50.0% | |
CTCCCATAGCCACATGCAAT+GGG | + | tig0028517:13042-13061 | None:intergenic | 50.0% | |
CAGCTCAAGTATCCAGCACC+AGG | - | tig0028517:12370-12389 | Msa1438160:intron | 55.0% | |
GCTCAAGTATCCAGCACCAG+GGG | - | tig0028517:12372-12391 | Msa1438160:intron | 55.0% | |
! | AGCATCTGGGTTGAGTCGAG+TGG | - | tig0028517:12432-12451 | Msa1438160:intron | 55.0% |
GGAATCAAATGCCAGAGCCC+AGG | + | tig0028517:12695-12714 | None:intergenic | 55.0% | |
! | GGGCTCTGGCATTTGATTCC+TGG | - | tig0028517:12695-12714 | Msa1438160:intron | 55.0% |
!! | GAAGGCGCCATATGCGAAAG+TGG | - | tig0028517:12991-13010 | Msa1438160:CDS | 55.0% |
GCTCCCATAGCCACATGCAA+TGG | + | tig0028517:13043-13062 | None:intergenic | 55.0% | |
CAGCTCAAGTATCCAGCACC+AGG | - | tig0028517:12370-12389 | Msa1438160:intron | 55.0% | |
GCTCAAGTATCCAGCACCAG+GGG | - | tig0028517:12372-12391 | Msa1438160:intron | 55.0% | |
! | AGCATCTGGGTTGAGTCGAG+TGG | - | tig0028517:12432-12451 | Msa1438160:intron | 55.0% |
GGAATCAAATGCCAGAGCCC+AGG | + | tig0028517:12695-12714 | None:intergenic | 55.0% | |
! | GGGCTCTGGCATTTGATTCC+TGG | - | tig0028517:12695-12714 | Msa1438160:intron | 55.0% |
!! | GAAGGCGCCATATGCGAAAG+TGG | - | tig0028517:12991-13010 | Msa1438160:CDS | 55.0% |
GCTCCCATAGCCACATGCAA+TGG | + | tig0028517:13043-13062 | None:intergenic | 55.0% | |
!! | AACTTTGGAGCCCCTGGTGC+TGG | + | tig0028517:12385-12404 | None:intergenic | 60.0% |
AGAAAGCCCTCCTCCTCCCT+GGG | - | tig0028517:12675-12694 | Msa1438160:intron | 60.0% | |
TCAAATGCCAGAGCCCAGGG+AGG | + | tig0028517:12691-12710 | None:intergenic | 60.0% | |
CATGTGGCTATGGGAGCTGC+TGG | - | tig0028517:13046-13065 | Msa1438160:CDS | 60.0% | |
!! | AACTTTGGAGCCCCTGGTGC+TGG | + | tig0028517:12385-12404 | None:intergenic | 60.0% |
AGAAAGCCCTCCTCCTCCCT+GGG | - | tig0028517:12675-12694 | Msa1438160:intron | 60.0% | |
TCAAATGCCAGAGCCCAGGG+AGG | + | tig0028517:12691-12710 | None:intergenic | 60.0% | |
CATGTGGCTATGGGAGCTGC+TGG | - | tig0028517:13046-13065 | Msa1438160:CDS | 60.0% | |
GGAGGAGGAGGGCTTTCTCG+AGG | + | tig0028517:12673-12692 | None:intergenic | 65.0% | |
GAGAAAGCCCTCCTCCTCCC+TGG | - | tig0028517:12674-12693 | Msa1438160:intron | 65.0% | |
AATGCCAGAGCCCAGGGAGG+AGG | + | tig0028517:12688-12707 | None:intergenic | 65.0% | |
GGAGGAGGAGGGCTTTCTCG+AGG | + | tig0028517:12673-12692 | None:intergenic | 65.0% | |
GAGAAAGCCCTCCTCCTCCC+TGG | - | tig0028517:12674-12693 | Msa1438160:intron | 65.0% | |
AATGCCAGAGCCCAGGGAGG+AGG | + | tig0028517:12688-12707 | None:intergenic | 65.0% | |
CCAGAGCCCAGGGAGGAGGA+GGG | + | tig0028517:12684-12703 | None:intergenic | 70.0% | |
CCAGAGCCCAGGGAGGAGGA+GGG | + | tig0028517:12684-12703 | None:intergenic | 70.0% | |
CCCTCCTCCTCCCTGGGCTC+TGG | - | tig0028517:12681-12700 | Msa1438160:intron | 75.0% | |
GCCAGAGCCCAGGGAGGAGG+AGG | + | tig0028517:12685-12704 | None:intergenic | 75.0% | |
CCCTCCTCCTCCCTGGGCTC+TGG | - | tig0028517:12681-12700 | Msa1438160:intron | 75.0% | |
GCCAGAGCCCAGGGAGGAGG+AGG | + | tig0028517:12685-12704 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0028517 | gene | 11431 | 13159 | 11431 | ID=Msa1438160;Name=Msa1438160 |
tig0028517 | mRNA | 11431 | 13159 | 11431 | ID=Msa1438160-mRNA-1;Parent=Msa1438160;Name=Msa1438160-mRNA-1;_AED=0.16;_eAED=0.16;_QI=46|0.5|0.66|1|1|1|3|0|312 |
tig0028517 | exon | 11431 | 11662 | 11431 | ID=Msa1438160-mRNA-1:exon:11125;Parent=Msa1438160-mRNA-1 |
tig0028517 | exon | 11847 | 12217 | 11847 | ID=Msa1438160-mRNA-1:exon:11124;Parent=Msa1438160-mRNA-1 |
tig0028517 | exon | 12778 | 13159 | 12778 | ID=Msa1438160-mRNA-1:exon:11123;Parent=Msa1438160-mRNA-1 |
tig0028517 | five_prime_UTR | 13114 | 13159 | 13114 | ID=Msa1438160-mRNA-1:five_prime_utr;Parent=Msa1438160-mRNA-1 |
tig0028517 | CDS | 12778 | 13113 | 12778 | ID=Msa1438160-mRNA-1:cds;Parent=Msa1438160-mRNA-1 |
tig0028517 | CDS | 11847 | 12217 | 11847 | ID=Msa1438160-mRNA-1:cds;Parent=Msa1438160-mRNA-1 |
tig0028517 | CDS | 11431 | 11662 | 11431 | ID=Msa1438160-mRNA-1:cds;Parent=Msa1438160-mRNA-1 |
Gene Sequence |
Protein sequence |