Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985620 | XP_024631199.1 | 92.881 | 885 | 36 | 5 | 1 | 883 | 1 | 860 | 0.0 | 1687 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985620 | sp|Q9FQ03|XRN3_ARATH | 69.214 | 903 | 219 | 12 | 1 | 883 | 1 | 864 | 0.0 | 1194 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985620 | A0A396JH84 | 92.881 | 885 | 36 | 5 | 1 | 883 | 1 | 860 | 0.0 | 1687 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0397780 | Msa0985620 | 0.805269 | 1.448618e-49 | -8.615850e-47 |
Msa0399410 | Msa0985620 | 0.801506 | 8.721097e-49 | -8.615850e-47 |
Msa0985620 | Msa0985630 | 0.881140 | 3.073209e-70 | -8.615850e-47 |
Msa0888860 | Msa0985620 | 0.840829 | 6.869518e-58 | -8.615850e-47 |
Msa0910690 | Msa0985620 | 0.951407 | 2.181995e-109 | -8.615850e-47 |
Msa0911970 | Msa0985620 | 0.854977 | 8.590977e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985620 | MtrunA17_Chr1g0156381 | 92.881 | 885 | 36 | 5 | 1 | 883 | 1 | 860 | 0.0 | 1687 |
Msa0985620 | MtrunA17_Chr7g0240901 | 80.226 | 885 | 138 | 7 | 1 | 883 | 1 | 850 | 0.0 | 1458 |
Msa0985620 | MtrunA17_Chr4g0030651 | 80.113 | 885 | 137 | 8 | 1 | 883 | 1 | 848 | 0.0 | 1441 |
Msa0985620 | MtrunA17_Chr1g0191031 | 67.146 | 417 | 126 | 3 | 1 | 416 | 1 | 407 | 0.0 | 583 |
Msa0985620 | MtrunA17_Chr1g0191031 | 50.975 | 359 | 162 | 5 | 528 | 883 | 407 | 754 | 5.07e-108 | 358 |
Msa0985620 | MtrunA17_Chr7g0273801 | 65.947 | 417 | 136 | 4 | 1 | 415 | 1 | 413 | 0.0 | 566 |
Msa0985620 | MtrunA17_Chr7g0273801 | 50.920 | 326 | 153 | 3 | 558 | 883 | 439 | 757 | 2.12e-101 | 340 |
Msa0985620 | MtrunA17_Chr4g0025871 | 51.963 | 433 | 135 | 8 | 1 | 414 | 1 | 379 | 2.32e-129 | 408 |
Msa0985620 | MtrunA17_Chr4g0025871 | 40.418 | 287 | 122 | 4 | 509 | 789 | 410 | 653 | 5.93e-57 | 209 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985620 | AT1G75660.1 | 69.214 | 903 | 219 | 12 | 1 | 883 | 1 | 864 | 0.0 | 1194 |
Msa0985620 | AT5G42540.2 | 59.025 | 903 | 307 | 14 | 1 | 883 | 1 | 860 | 0.0 | 1006 |
Msa0985620 | AT5G42540.1 | 59.263 | 896 | 305 | 13 | 1 | 883 | 1 | 849 | 0.0 | 1003 |
Msa0985620 | AT1G54490.1 | 68.106 | 417 | 123 | 5 | 1 | 415 | 1 | 409 | 0.0 | 573 |
Msa0985620 | AT1G54490.1 | 49.867 | 375 | 175 | 6 | 530 | 903 | 412 | 774 | 1.71e-103 | 347 |
Msa0985620 | AT1G54490.2 | 68.588 | 347 | 100 | 4 | 71 | 415 | 12 | 351 | 1.78e-152 | 475 |
Msa0985620 | AT1G54490.2 | 49.867 | 375 | 175 | 6 | 530 | 903 | 354 | 716 | 2.72e-104 | 347 |
Find 307 sgRNAs with CRISPR-Local
Find 667 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGAAAGTTTCTTCTCTT+TGG | 0.162132 | 6_4:+32335711 | Msa0985620:CDS |
TGGGAGTTGGCTTAGGGTTT+TGG | 0.171747 | 6_4:-32335654 | None:intergenic |
CCGGAAAGTTTCTTCTCTTT+GGG | 0.173501 | 6_4:+32335712 | Msa0985620:CDS |
TTATCATATTCAAGATTATT+AGG | 0.184132 | 6_4:-32326864 | None:intergenic |
AACAAATTTCTTCCTTCTTC+GGG | 0.191939 | 6_4:+32326683 | Msa0985620:five_prime_UTR |
ACCCGACCGGGATCCGTTTC+TGG | 0.192749 | 6_4:+32335254 | Msa0985620:CDS |
GCCTAGGAAGCTTCTCTTTA+TGG | 0.199961 | 6_4:+32327838 | Msa0985620:CDS |
GTTTGTAGTTTCTGAATATT+TGG | 0.223066 | 6_4:+32329584 | Msa0985620:intron |
TCAGGAGAATTTGATGAAAA+AGG | 0.233715 | 6_4:+32329448 | Msa0985620:CDS |
AAACCATTTGATCAGCTTCT+TGG | 0.239288 | 6_4:+32333435 | Msa0985620:CDS |
AGGGAGTTGGGAGTTGGCTT+AGG | 0.245552 | 6_4:-32335661 | None:intergenic |
TGCTCGACTCTGCTCAAATT+TGG | 0.250358 | 6_4:-32330153 | None:intergenic |
CCCAAAGAGAAGAAACTTTC+CGG | 0.254606 | 6_4:-32335712 | None:intergenic |
AAGACGAGAATCGTGGAATT+TGG | 0.269060 | 6_4:-32330899 | None:intergenic |
TAACAAATTTCTTCCTTCTT+CGG | 0.270849 | 6_4:+32326682 | Msa0985620:five_prime_UTR |
ATTGGATAAAAGTCAATAAT+TGG | 0.272607 | 6_4:-32333618 | None:intergenic |
AAAGTTGCCGATTCCTCTTT+AGG | 0.277058 | 6_4:-32328622 | None:intergenic |
TGTTGATAGTGTTCTGTTTA+GGG | 0.288962 | 6_4:-32326623 | None:intergenic |
TTCCTTGGCTTTCAAATTGA+TGG | 0.291893 | 6_4:-32335576 | None:intergenic |
AAGCTTCTCTTTATGGCTAT+TGG | 0.293967 | 6_4:+32327845 | Msa0985620:CDS |
AATTGTAGCTATCGACGATT+TGG | 0.299223 | 6_4:-32335505 | None:intergenic |
AACCCTGTCCTCCCATCTTC+AGG | 0.302826 | 6_4:+32334527 | Msa0985620:CDS |
GGAGGGAGTTGGAGGGAGTT+GGG | 0.307081 | 6_4:-32335673 | None:intergenic |
GGTGTAGGGCTTTGTGCCTT+TGG | 0.307931 | 6_4:-32335477 | None:intergenic |
TTGTTGATAGTGTTCTGTTT+AGG | 0.315172 | 6_4:-32326624 | None:intergenic |
CTCCACAAGCCATCTGTAAA+AGG | 0.320160 | 6_4:-32326745 | None:intergenic |
TCATGCCATGGAACAGGTTC+AGG | 0.320171 | 6_4:-32335068 | None:intergenic |
ACTATGAAGGTGTTTGTTCT+TGG | 0.320479 | 6_4:+32332520 | Msa0985620:CDS |
ATCTTCAGGTCCCCTATTGC+AGG | 0.325511 | 6_4:+32334541 | Msa0985620:CDS |
ATCTATTTCAAGACTATTCT+CGG | 0.326915 | 6_4:-32331061 | None:intergenic |
GGGAGGGAGTTGGAGGGAGT+TGG | 0.328762 | 6_4:-32335674 | None:intergenic |
TGATGAAGTGCGTCTTCTTC+AGG | 0.329315 | 6_4:+32333889 | Msa0985620:CDS |
AGACGCACTTCATCAATAAA+AGG | 0.333488 | 6_4:-32333881 | None:intergenic |
TACAATACTATATTCATCTT+AGG | 0.337529 | 6_4:+32328701 | Msa0985620:CDS |
CTCTGAACGTGCTGATGTTA+AGG | 0.342982 | 6_4:+32334183 | Msa0985620:CDS |
TATCATATTCAAGATTATTA+GGG | 0.344500 | 6_4:-32326863 | None:intergenic |
CCTGCACCATTTCAACAATC+TGG | 0.349992 | 6_4:+32330937 | Msa0985620:CDS |
CTTTCTGATGCAAATGTTCC+CGG | 0.352759 | 6_4:+32328858 | Msa0985620:CDS |
GGGAGTTGGGAGTTGGCTTA+GGG | 0.358012 | 6_4:-32335660 | None:intergenic |
TCGATCTCAAAAGGAGGATT+AGG | 0.358412 | 6_4:-32329643 | None:intergenic |
AGTTGGAGGGAGTTGGGAGT+TGG | 0.359363 | 6_4:-32335667 | None:intergenic |
AGATAACTTAGAAACTTTAC+TGG | 0.360113 | 6_4:-32331004 | None:intergenic |
TAAAGTTTCTAAGTTATCTT+CGG | 0.362977 | 6_4:+32331008 | Msa0985620:CDS |
CCGAGGAACTTGATGCTATA+CGG | 0.366750 | 6_4:+32332362 | Msa0985620:CDS |
ATGTCTTCCATGCCTGCAAT+AGG | 0.371620 | 6_4:-32334553 | None:intergenic |
AGTATACAAGAAGGAACTTA+AGG | 0.372016 | 6_4:+32329986 | Msa0985620:CDS |
CACACCTGGAACTGAATTCA+TGG | 0.374752 | 6_4:+32328660 | Msa0985620:CDS |
GTTCCATGGCATGAAGCTAA+TGG | 0.376554 | 6_4:+32335077 | Msa0985620:CDS |
TTCTACAGACTATGACAATT+GGG | 0.377262 | 6_4:+32335036 | Msa0985620:intron |
GGGCTTTGTGCCTTTGGCTA+AGG | 0.377612 | 6_4:-32335471 | None:intergenic |
TTTCTACAGACTATGACAAT+TGG | 0.378411 | 6_4:+32335035 | Msa0985620:intron |
GCATGTTTGATTACATTGAT+AGG | 0.378445 | 6_4:+32327798 | Msa0985620:CDS |
ATCCTTCAAGATTTCTTTGA+AGG | 0.380883 | 6_4:-32328914 | None:intergenic |
ATTTCTTTGAAGGCGGATAT+AGG | 0.382834 | 6_4:-32328904 | None:intergenic |
CTTAATATTAACTTTGAGTT+GGG | 0.387432 | 6_4:+32333402 | Msa0985620:CDS |
AACAAACGAAAACTGTTATT+CGG | 0.387709 | 6_4:+32326656 | Msa0985620:five_prime_UTR |
CAAATGCTTGTGTGGTCAAA+TGG | 0.388119 | 6_4:+32329384 | Msa0985620:CDS |
TTTCATCTTCGACGAGGCTT+TGG | 0.389083 | 6_4:-32335342 | None:intergenic |
TTATTCTTTCCACCGTTAGC+TGG | 0.389609 | 6_4:-32330804 | None:intergenic |
CCCCTTTGCGTCTGATCTGA+AGG | 0.393708 | 6_4:+32333368 | Msa0985620:CDS |
TCCGTTTCTGGTCGGGAGCT+TGG | 0.398669 | 6_4:+32335266 | Msa0985620:CDS |
AAGAAAATTACCCTATCTTC+AGG | 0.399804 | 6_4:-32326930 | None:intergenic |
AAAGTTTCTAAGTTATCTTC+GGG | 0.406060 | 6_4:+32331009 | Msa0985620:CDS |
AGTACACGACATTGCCTGTA+TGG | 0.406934 | 6_4:+32328945 | Msa0985620:CDS |
ATGCCCTGCCTGAGCCGTAT+AGG | 0.407122 | 6_4:+32333571 | Msa0985620:CDS |
CTGTGCACCAACCTTTCAAC+GGG | 0.411150 | 6_4:-32334217 | None:intergenic |
CTGGAATAACGGAAGGGCTT+TGG | 0.411423 | 6_4:-32335438 | None:intergenic |
CTTTGGCGGAGGATGACAAC+GGG | 0.413665 | 6_4:-32335325 | None:intergenic |
CGCCTTCAAAGAAATCTTGA+AGG | 0.414724 | 6_4:+32328912 | Msa0985620:CDS |
TAAACCGCCTTGACCGTTGC+TGG | 0.416833 | 6_4:-32327991 | None:intergenic |
TGTCTTCCATGCCTGCAATA+GGG | 0.420068 | 6_4:-32334552 | None:intergenic |
TATTCAAGATTATTAGGGTT+GGG | 0.420701 | 6_4:-32326858 | None:intergenic |
TTGGACTCTGAGGGAATGTC+TGG | 0.425345 | 6_4:+32329603 | Msa0985620:CDS |
ACCGGGATCCGTTTCTGGTC+GGG | 0.425589 | 6_4:+32335259 | Msa0985620:CDS |
AGCTGATCAAATGGTTTGAA+TGG | 0.427200 | 6_4:-32333429 | None:intergenic |
TGTTTAACATGGTGCGGCCT+AGG | 0.428483 | 6_4:+32327822 | Msa0985620:CDS |
CATCTTCGACGAGGCTTTGG+CGG | 0.429600 | 6_4:-32335339 | None:intergenic |
GGAATCGGGTTTGATTTCCT+TGG | 0.429698 | 6_4:-32335591 | None:intergenic |
TCCAAGCTCCCGACCAGAAA+CGG | 0.434588 | 6_4:-32335267 | None:intergenic |
AATCTTATGCTCCCCTTCAC+CGG | 0.435640 | 6_4:-32328877 | None:intergenic |
GCAGCCATGAATTCAGTTCC+AGG | 0.442610 | 6_4:-32328664 | None:intergenic |
TTCCATGGCATGAAGCTAAT+GGG | 0.443751 | 6_4:+32335078 | Msa0985620:CDS |
GGAAAGGCTAAAAGGAAGTC+AGG | 0.447502 | 6_4:+32329430 | Msa0985620:CDS |
TTAGCTTCATGCCATGGAAC+AGG | 0.447514 | 6_4:-32335074 | None:intergenic |
CCTCTATCCGATGGGAGTTC+CGG | 0.449475 | 6_4:+32326722 | Msa0985620:exon |
GGACCTGAAGATGGGAGGAC+AGG | 0.450117 | 6_4:-32334530 | None:intergenic |
AGGAAACAATGATGAGTATT+CGG | 0.450970 | 6_4:+32330368 | Msa0985620:CDS |
ATTGTAGCTATCGACGATTT+GGG | 0.452110 | 6_4:-32335504 | None:intergenic |
ATGCCGATGATGTCGGAATC+GGG | 0.452199 | 6_4:-32335605 | None:intergenic |
GGCTTTGTGCCTTTGGCTAA+GGG | 0.454771 | 6_4:-32335470 | None:intergenic |
CTTGTTTGAGATGCTGAGCA+TGG | 0.455314 | 6_4:-32335541 | None:intergenic |
TCAGTCATAAGTTTCCTATA+CGG | 0.456502 | 6_4:-32333585 | None:intergenic |
CAGATTAAATTGGGAGAACC+AGG | 0.456576 | 6_4:+32332295 | Msa0985620:intron |
TCTGATGTGTTCAACTCAAA+AGG | 0.458187 | 6_4:+32331336 | Msa0985620:CDS |
ACACCTCCTCAAAAGAGGTC+GGG | 0.458509 | 6_4:-32327769 | None:intergenic |
TCCTGGTTGGAGTAACATAA+AGG | 0.458871 | 6_4:+32328735 | Msa0985620:CDS |
TCCTTGGCTTTCAAATTGAT+GGG | 0.459718 | 6_4:-32335575 | None:intergenic |
CCAAAGAGAAGAAACTTTCC+GGG | 0.460806 | 6_4:-32335711 | None:intergenic |
TTTCAGGTTGTATTTACTCC+TGG | 0.462901 | 6_4:+32329355 | Msa0985620:intron |
GCGTCTGATCTGAAGGGCCT+TGG | 0.463297 | 6_4:+32333375 | Msa0985620:CDS |
AAAACGAGCTCGAATGCAAC+AGG | 0.463521 | 6_4:+32330218 | Msa0985620:CDS |
GCTATATGTTCATGTGCATC+TGG | 0.467409 | 6_4:-32334785 | None:intergenic |
TGGCAAACGCAATGCTTGGC+AGG | 0.467550 | 6_4:+32333758 | Msa0985620:CDS |
GATGCCGATGATGTCGGAAT+CGG | 0.468837 | 6_4:-32335606 | None:intergenic |
TGCAATAGGGGACCTGAAGA+TGG | 0.469373 | 6_4:-32334539 | None:intergenic |
ACGACATTGCCTGTATGGTT+TGG | 0.469658 | 6_4:+32328950 | Msa0985620:CDS |
TGGCTAAGGGATACGTGAAC+TGG | 0.469817 | 6_4:-32335457 | None:intergenic |
GTGTGGTCAAATGGGTCATA+TGG | 0.470523 | 6_4:+32329393 | Msa0985620:CDS |
ACTTCCTCCTAAAGAGGAAT+CGG | 0.472690 | 6_4:+32328615 | Msa0985620:CDS |
CCCTTCAGATCAGACGCAAA+GGG | 0.473297 | 6_4:-32333369 | None:intergenic |
ACGATTTGGGTGATGGTGTA+GGG | 0.477739 | 6_4:-32335491 | None:intergenic |
GAGATGCTGAGCATGGGCTT+TGG | 0.477948 | 6_4:-32335534 | None:intergenic |
CGGAAAGTTTCTTCTCTTTG+GGG | 0.480785 | 6_4:+32335713 | Msa0985620:CDS |
ACCAGAAACGGATCCCGGTC+GGG | 0.481726 | 6_4:-32335255 | None:intergenic |
TTGTTTGAGATGCTGAGCAT+GGG | 0.481907 | 6_4:-32335540 | None:intergenic |
ATGCAAATGTTCCCGGTGAA+GGG | 0.483331 | 6_4:+32328865 | Msa0985620:CDS |
ACTCCAAGAAGCTGATCAAA+TGG | 0.483604 | 6_4:-32333438 | None:intergenic |
CCGGAACTCCCATCGGATAG+AGG | 0.483895 | 6_4:-32326722 | None:intergenic |
CATTCAAAATCGATCTCAAA+AGG | 0.484401 | 6_4:-32329652 | None:intergenic |
GTGGGCCCAGATTGTTGAAA+TGG | 0.488546 | 6_4:-32330943 | None:intergenic |
TAATACCTCTCTTTCCAGCC+TGG | 0.489333 | 6_4:-32332313 | None:intergenic |
CTGCACCATTTCAACAATCT+GGG | 0.489707 | 6_4:+32330938 | Msa0985620:CDS |
CAAGAAGGAACTTAAGGGAA+TGG | 0.493096 | 6_4:+32329992 | Msa0985620:CDS |
TGATATGATTATGTTGGGTC+TGG | 0.494234 | 6_4:+32329110 | Msa0985620:CDS |
GACCGGGATCCGTTTCTGGT+CGG | 0.494602 | 6_4:+32335258 | Msa0985620:CDS |
TAACGGAAGGGCTTTGGCGG+AGG | 0.495341 | 6_4:-32335432 | None:intergenic |
GTCTTCCATGCCTGCAATAG+GGG | 0.496088 | 6_4:-32334551 | None:intergenic |
CCGTATAGCATCAAGTTCCT+CGG | 0.496492 | 6_4:-32332362 | None:intergenic |
CTCAAACACCTCCTCAAAAG+AGG | 0.497276 | 6_4:-32327774 | None:intergenic |
CTTCGACGAGGCTTTGGCGG+AGG | 0.498693 | 6_4:-32335336 | None:intergenic |
ATATTTGACAAGCGGTAGTA+AGG | 0.498955 | 6_4:+32330019 | Msa0985620:CDS |
GAAACTTTCCGGGTCGTAGT+GGG | 0.499684 | 6_4:-32335701 | None:intergenic |
GAATAACGGAAGGGCTTTGG+CGG | 0.500026 | 6_4:-32335435 | None:intergenic |
TGATGCGGTCGAAGAAGAAC+CGG | 0.500749 | 6_4:+32326788 | Msa0985620:CDS |
GCTTAATATTAACTTTGAGT+TGG | 0.501013 | 6_4:+32333401 | Msa0985620:CDS |
CGTATAGCATCAAGTTCCTC+GGG | 0.501024 | 6_4:-32332361 | None:intergenic |
AAGTCAATAATTGGCGAGGT+TGG | 0.503626 | 6_4:-32333609 | None:intergenic |
CATTGATAGGCTGTTTAACA+TGG | 0.504607 | 6_4:+32327811 | Msa0985620:CDS |
GACGATTTGGGTGATGGTGT+AGG | 0.504753 | 6_4:-32335492 | None:intergenic |
GTGGCTGATCTTGAAATAGT+TGG | 0.504925 | 6_4:+32330345 | Msa0985620:CDS |
CAAATTGATGGGGCAATCGA+GGG | 0.505592 | 6_4:-32335564 | None:intergenic |
GCCATAAAGAGAAGCTTCCT+AGG | 0.505863 | 6_4:-32327839 | None:intergenic |
TCCCGACCAGAAACGGATCC+CGG | 0.506194 | 6_4:-32335260 | None:intergenic |
TGCAGGCATGGAAGACATCA+TGG | 0.506225 | 6_4:+32334558 | Msa0985620:CDS |
ACTGTGAAGGAAAGGCTAAA+AGG | 0.507871 | 6_4:+32329422 | Msa0985620:CDS |
CACAAGCATTTGTCTTGACC+AGG | 0.508385 | 6_4:-32329373 | None:intergenic |
GTTTCCTATACGGCTCAGGC+AGG | 0.508491 | 6_4:-32333575 | None:intergenic |
CAGATCGTCGACCCCGAAGA+AGG | 0.510092 | 6_4:-32326695 | None:intergenic |
CACCTCCTCAAAAGAGGTCG+GGG | 0.510452 | 6_4:-32327768 | None:intergenic |
AACTTTCCGGGTCGTAGTGG+GGG | 0.510595 | 6_4:-32335699 | None:intergenic |
AGAAACTTTCCGGGTCGTAG+TGG | 0.510766 | 6_4:-32335702 | None:intergenic |
ATATTCAAGATTATTAGGGT+TGG | 0.512954 | 6_4:-32326859 | None:intergenic |
CTTAGGTTGAACAATGATCC+TGG | 0.517293 | 6_4:+32328718 | Msa0985620:CDS |
TGTTGAAATGGTGCAGGCGT+TGG | 0.517474 | 6_4:-32330931 | None:intergenic |
ACAGGGTTCTCCACTACATA+AGG | 0.517478 | 6_4:-32334512 | None:intergenic |
CCCCATCAATTTGAAAGCCA+AGG | 0.517673 | 6_4:+32335574 | Msa0985620:CDS |
TTGGGTTTGCTAGTGTCTAT+CGG | 0.517775 | 6_4:-32326840 | None:intergenic |
TTCTGAATATTTGGACTCTG+AGG | 0.518941 | 6_4:+32329593 | Msa0985620:CDS |
TCTCAAACCCTGACCTGGAA+AGG | 0.519340 | 6_4:-32329493 | None:intergenic |
GATTCAAATGTCATCACACC+TGG | 0.521016 | 6_4:+32328646 | Msa0985620:CDS |
CCAGATTGTTGAAATGGTGC+AGG | 0.521299 | 6_4:-32330937 | None:intergenic |
GTATACAAGAAGGAACTTAA+GGG | 0.522861 | 6_4:+32329987 | Msa0985620:CDS |
AAGAAGGAACTTAAGGGAAT+GGG | 0.523737 | 6_4:+32329993 | Msa0985620:CDS |
GAACTTGATTAACTTGCTGA+TGG | 0.524094 | 6_4:+32329962 | Msa0985620:CDS |
GGATGCTGATATGATTATGT+TGG | 0.525019 | 6_4:+32329104 | Msa0985620:intron |
ACATGCAGTGGTGGAATGAA+TGG | 0.525756 | 6_4:+32334481 | Msa0985620:CDS |
GACTTTGAAGTGGACATGAA+TGG | 0.526515 | 6_4:+32333738 | Msa0985620:intron |
CAGAAAACTTCCTCCTAAAG+AGG | 0.527440 | 6_4:+32328609 | Msa0985620:CDS |
TACAGGCAATGTCGTGTACT+CGG | 0.528443 | 6_4:-32328942 | None:intergenic |
TATAGATGGTGTTGCGCCAA+GGG | 0.530218 | 6_4:+32327958 | Msa0985620:intron |
ATACACCGAGGGTCTATGTT+GGG | 0.530331 | 6_4:+32332485 | Msa0985620:CDS |
ATCTTATGCTCCCCTTCACC+GGG | 0.530616 | 6_4:-32328876 | None:intergenic |
TACCATTCATGTCGAGGTAG+AGG | 0.531178 | 6_4:-32326887 | None:intergenic |
ATCTGAGTTCCTCTATCCGA+TGG | 0.531925 | 6_4:+32326713 | Msa0985620:exon |
AAGCAAGAGGAGATACTGTT+GGG | 0.532154 | 6_4:+32330842 | Msa0985620:CDS |
CCCTTTGCGTCTGATCTGAA+GGG | 0.533829 | 6_4:+32333369 | Msa0985620:CDS |
TTAAATTGGGAGAACCAGGC+TGG | 0.534080 | 6_4:+32332299 | Msa0985620:CDS |
TCTGAATATTTGGACTCTGA+GGG | 0.534393 | 6_4:+32329594 | Msa0985620:CDS |
GATGCAAATGTTCCCGGTGA+AGG | 0.536350 | 6_4:+32328864 | Msa0985620:CDS |
GACCTGAAGATGGGAGGACA+GGG | 0.538748 | 6_4:-32334529 | None:intergenic |
CAGGTCCCCTATTGCAGGCA+TGG | 0.538887 | 6_4:+32334546 | Msa0985620:CDS |
AACACCTCCTCAAAAGAGGT+CGG | 0.539477 | 6_4:-32327770 | None:intergenic |
ATAAGTTTCCTATACGGCTC+AGG | 0.540135 | 6_4:-32333579 | None:intergenic |
TGAATGGCAAACGCAATGCT+TGG | 0.541105 | 6_4:+32333754 | Msa0985620:CDS |
AAATGCTTGTGTGGTCAAAT+GGG | 0.541246 | 6_4:+32329385 | Msa0985620:CDS |
CTGGAAAGAGAGGTATTATG+AGG | 0.542231 | 6_4:+32332318 | Msa0985620:CDS |
GATGCTGATATGATTATGTT+GGG | 0.545172 | 6_4:+32329105 | Msa0985620:CDS |
CTATCTTCAGGATGAAAACA+TGG | 0.545336 | 6_4:-32326918 | None:intergenic |
TTCTGGTCGGGAGCTTGGAG+AGG | 0.545839 | 6_4:+32335271 | Msa0985620:CDS |
CTCCCATTAGCTTCATGCCA+TGG | 0.547362 | 6_4:-32335080 | None:intergenic |
AACATCAGCACGTTCAGAGT+TGG | 0.547653 | 6_4:-32334179 | None:intergenic |
CGAGAGGAATTTGAGAGGGA+GGG | 0.549293 | 6_4:+32328586 | Msa0985620:CDS |
CGACTTGAAAATAAAGCTGA+AGG | 0.551149 | 6_4:+32331296 | Msa0985620:CDS |
AATTGAAGGACGATATGAAT+CGG | 0.551171 | 6_4:-32326588 | None:intergenic |
GATAGGCTATTGAAGAATCA+AGG | 0.551651 | 6_4:+32328560 | Msa0985620:intron |
TCAAATTGATGGGGCAATCG+AGG | 0.552121 | 6_4:-32335565 | None:intergenic |
AAGGTGTTTGTTCTTGGCAA+TGG | 0.552821 | 6_4:+32332526 | Msa0985620:CDS |
AACCTCTACCTCGACATGAA+TGG | 0.553368 | 6_4:+32326885 | Msa0985620:CDS |
TGTACTAATGCACGCAGAGA+GGG | 0.554023 | 6_4:-32334131 | None:intergenic |
GTGATGCATTATTACTATGA+AGG | 0.554988 | 6_4:+32332507 | Msa0985620:CDS |
GCTATCGACGATTTGGGTGA+TGG | 0.555625 | 6_4:-32335498 | None:intergenic |
GTATAGATGGTGTTGCGCCA+AGG | 0.557590 | 6_4:+32327957 | Msa0985620:intron |
CCGCATCAATGATAACCATC+GGG | 0.558710 | 6_4:-32326773 | None:intergenic |
TCTACAGACTATGACAATTG+GGG | 0.559139 | 6_4:+32335037 | Msa0985620:intron |
GGCGCGAAACGTGAAATTGA+AGG | 0.559722 | 6_4:-32326602 | None:intergenic |
GGCTGCAGACTGTGAAGGAA+AGG | 0.559772 | 6_4:+32329414 | Msa0985620:CDS |
GGTTGAACAATGATCCTGGT+TGG | 0.559878 | 6_4:+32328722 | Msa0985620:CDS |
GGGAGGAGATACAACGAAAG+TGG | 0.560155 | 6_4:+32335098 | Msa0985620:CDS |
TGATATATACCAAACCATAC+AGG | 0.562216 | 6_4:-32328959 | None:intergenic |
CTATTTCAGGAAAACCCGAC+CGG | 0.563405 | 6_4:+32335241 | Msa0985620:intron |
ACCTTTATGTTACTCCAACC+AGG | 0.564158 | 6_4:-32328736 | None:intergenic |
CTTCAAGATTTCTTTGAAGG+CGG | 0.564485 | 6_4:-32328911 | None:intergenic |
TTTGAGGATGCCGATGATGT+CGG | 0.564801 | 6_4:-32335612 | None:intergenic |
CTAGCGTAGGCATGTGTGGT+AGG | 0.565372 | 6_4:-32329723 | None:intergenic |
GGATACGTGAACTGGAATAA+CGG | 0.566030 | 6_4:-32335449 | None:intergenic |
GCAATAGGGGACCTGAAGAT+GGG | 0.566930 | 6_4:-32334538 | None:intergenic |
AAACTTTCCGGGTCGTAGTG+GGG | 0.566938 | 6_4:-32335700 | None:intergenic |
AGAGACTCGGGTTGAACTTG+AGG | 0.568442 | 6_4:-32330865 | None:intergenic |
CCTTCGATTTCGATGACGAC+CGG | 0.570304 | 6_4:-32326807 | None:intergenic |
ACAAGCCATCTGTAAAAGGC+CGG | 0.570801 | 6_4:-32326741 | None:intergenic |
AAACCCGATTCCGACATCAT+CGG | 0.572004 | 6_4:+32335602 | Msa0985620:CDS |
GCCCTTCAGATCAGACGCAA+AGG | 0.572072 | 6_4:-32333370 | None:intergenic |
CAAGCAAGAGGAGATACTGT+TGG | 0.572683 | 6_4:+32330841 | Msa0985620:CDS |
AACTTGATTAACTTGCTGAT+GGG | 0.573034 | 6_4:+32329963 | Msa0985620:CDS |
AAATGAACCAGCAACGGTCA+AGG | 0.575308 | 6_4:+32327984 | Msa0985620:CDS |
ATCTCTAGCGTAGGCATGTG+TGG | 0.577821 | 6_4:-32329727 | None:intergenic |
GCTGTGCACCAACCTTTCAA+CGG | 0.578097 | 6_4:-32334218 | None:intergenic |
CCTTGGCTTTCAAATTGATG+GGG | 0.578396 | 6_4:-32335574 | None:intergenic |
CGTCAGCAGTCACAAGCAAG+AGG | 0.578680 | 6_4:+32330829 | Msa0985620:CDS |
GGAAACTGCAACTAGAGACT+CGG | 0.581142 | 6_4:-32330878 | None:intergenic |
TAAAACCTGAACCTGTTCCA+TGG | 0.582052 | 6_4:+32335063 | Msa0985620:CDS |
ACCGCATCAATGATAACCAT+CGG | 0.582637 | 6_4:-32326774 | None:intergenic |
GACCAGAAACGGATCCCGGT+CGG | 0.584858 | 6_4:-32335256 | None:intergenic |
AATACACCGAGGGTCTATGT+TGG | 0.589288 | 6_4:+32332484 | Msa0985620:CDS |
GATAACTTAGAAACTTTACT+GGG | 0.589316 | 6_4:-32331003 | None:intergenic |
ACAAATTTCTTCCTTCTTCG+GGG | 0.590756 | 6_4:+32326684 | Msa0985620:five_prime_UTR |
ACGAGAGGAATTTGAGAGGG+AGG | 0.592042 | 6_4:+32328585 | Msa0985620:CDS |
CTTCAGATCAGACGCAAAGG+GGG | 0.592411 | 6_4:-32333367 | None:intergenic |
GAAACTGCAACTAGAGACTC+GGG | 0.592902 | 6_4:-32330877 | None:intergenic |
ATAGCAATAAACCTTGCAGC+AGG | 0.593116 | 6_4:-32333465 | None:intergenic |
ACTTTCCGGGTCGTAGTGGG+GGG | 0.595192 | 6_4:-32335698 | None:intergenic |
GTTACGAGAGGAATTTGAGA+GGG | 0.595252 | 6_4:+32328582 | Msa0985620:CDS |
TTTCCTATACGGCTCAGGCA+GGG | 0.595415 | 6_4:-32333574 | None:intergenic |
AAGGAACTTAAGGGAATGGG+TGG | 0.595705 | 6_4:+32329996 | Msa0985620:CDS |
TGCAAATGTTCCCGGTGAAG+GGG | 0.598957 | 6_4:+32328866 | Msa0985620:CDS |
ACTTGAAAATAAAGCTGAAG+GGG | 0.599690 | 6_4:+32331298 | Msa0985620:CDS |
TTGTGCGTCAGACTTTGAAG+TGG | 0.600082 | 6_4:+32333728 | Msa0985620:intron |
TTTAGGGATACATGCAGTGG+TGG | 0.601340 | 6_4:+32334472 | Msa0985620:intron |
GCTTTGGCGGAGGATGACAA+CGG | 0.601501 | 6_4:-32335326 | None:intergenic |
ACGTGAACTGGAATAACGGA+AGG | 0.601885 | 6_4:-32335445 | None:intergenic |
TAAAAGGCCGGAACTCCCAT+CGG | 0.608543 | 6_4:-32326729 | None:intergenic |
TTCACGTATCCCTTAGCCAA+AGG | 0.611767 | 6_4:+32335461 | Msa0985620:CDS |
ATAGGCTGTTTAACATGGTG+CGG | 0.611977 | 6_4:+32327816 | Msa0985620:CDS |
TATGTATTAGTTATATGTTG+TGG | 0.612126 | 6_4:+32330326 | Msa0985620:intron |
GACTTGAAAATAAAGCTGAA+GGG | 0.612878 | 6_4:+32331297 | Msa0985620:CDS |
GAGAACCAGGCTGGAAAGAG+AGG | 0.613044 | 6_4:+32332308 | Msa0985620:CDS |
TTCAGAAACTTAACTCCATG+TGG | 0.614031 | 6_4:-32334815 | None:intergenic |
CAACTCAAAAGGTGGTCATG+AGG | 0.614389 | 6_4:+32331347 | Msa0985620:CDS |
TATTTCAGGAAAACCCGACC+GGG | 0.615329 | 6_4:+32335242 | Msa0985620:intron |
CATATAGCTCGACCACCACA+TGG | 0.615763 | 6_4:+32334800 | Msa0985620:CDS |
GGTTACATATCCTTATGTAG+TGG | 0.616997 | 6_4:+32334502 | Msa0985620:CDS |
ATAAAAGTCAATAATTGGCG+AGG | 0.617724 | 6_4:-32333613 | None:intergenic |
GCTGATCTTGAAATAGTTGG+AGG | 0.621236 | 6_4:+32330348 | Msa0985620:CDS |
GGAGATACAACGAAAGTGGA+AGG | 0.621816 | 6_4:+32335102 | Msa0985620:CDS |
TCTGAGTTCCTCTATCCGAT+GGG | 0.622482 | 6_4:+32326714 | Msa0985620:exon |
GGGCTAAAATGAACCAGCAA+CGG | 0.623053 | 6_4:+32327978 | Msa0985620:CDS |
GGTTACGAGAGGAATTTGAG+AGG | 0.625714 | 6_4:+32328581 | Msa0985620:CDS |
AAAAGGTGGTCATGAGGACA+AGG | 0.625945 | 6_4:+32331353 | Msa0985620:CDS |
CTGAATCAAGACGAGAATCG+TGG | 0.626995 | 6_4:-32330906 | None:intergenic |
GTTGCCGATTCCTCTTTAGG+AGG | 0.629901 | 6_4:-32328619 | None:intergenic |
GAATGATACCATTCATGTCG+AGG | 0.635160 | 6_4:-32326893 | None:intergenic |
TTATTTAGGGATACATGCAG+TGG | 0.637311 | 6_4:+32334469 | Msa0985620:intron |
TGCTAAAGATGCATCTGATG+CGG | 0.639455 | 6_4:+32328018 | Msa0985620:CDS |
GCAATAAAGAAGTCTTTGAG+AGG | 0.641433 | 6_4:+32330980 | Msa0985620:CDS |
CCTTCAGATCAGACGCAAAG+GGG | 0.642471 | 6_4:-32333368 | None:intergenic |
ACCTCATGAATCTCTAGCGT+AGG | 0.644295 | 6_4:-32329736 | None:intergenic |
TCAAAATCGATCTCAAAAGG+AGG | 0.644702 | 6_4:-32329649 | None:intergenic |
CCGGTCGTCATCGAAATCGA+AGG | 0.645716 | 6_4:+32326807 | Msa0985620:CDS |
TATATAGCTCCAGCTAACGG+TGG | 0.648913 | 6_4:+32330795 | Msa0985620:intron |
ATGGGTGGATATTTGACAAG+CGG | 0.650927 | 6_4:+32330011 | Msa0985620:CDS |
CCCGATGGTTATCATTGATG+CGG | 0.652087 | 6_4:+32326773 | Msa0985620:CDS |
TGAAGAATCAAGGTTACGAG+AGG | 0.653348 | 6_4:+32328570 | Msa0985620:CDS |
CATCACCCAACATAGACCCT+CGG | 0.653625 | 6_4:-32332490 | None:intergenic |
GTACTAATGCACGCAGAGAG+GGG | 0.653875 | 6_4:-32334130 | None:intergenic |
TAGGTCTTAAAATACACCGA+GGG | 0.657251 | 6_4:+32332474 | Msa0985620:intron |
CATATGGCTGCAGACTGTGA+AGG | 0.664189 | 6_4:+32329409 | Msa0985620:CDS |
GGTCAAGACAAATGCTTGTG+TGG | 0.667679 | 6_4:+32329376 | Msa0985620:CDS |
GTGTACTAATGCACGCAGAG+AGG | 0.675701 | 6_4:-32334132 | None:intergenic |
GATGTGTTCAACTCAAAAGG+TGG | 0.676030 | 6_4:+32331339 | Msa0985620:CDS |
GCTGATGGGAGTATACAAGA+AGG | 0.677400 | 6_4:+32329977 | Msa0985620:CDS |
ATAGGGGACCTGAAGATGGG+AGG | 0.687790 | 6_4:-32334535 | None:intergenic |
GCTTGTGGAGAAATACCCGA+TGG | 0.688991 | 6_4:+32326758 | Msa0985620:CDS |
ACCTCCTCAAAAGAGGTCGG+GGG | 0.689067 | 6_4:-32327767 | None:intergenic |
TGTGCGTTTCATCTTCGACG+AGG | 0.694106 | 6_4:-32335348 | None:intergenic |
AGAAACTTAACTCCATGTGG+TGG | 0.696063 | 6_4:-32334812 | None:intergenic |
CGTGAACTGGAATAACGGAA+GGG | 0.697061 | 6_4:-32335444 | None:intergenic |
CATGGCATGAAGCTAATGGG+AGG | 0.699584 | 6_4:+32335081 | Msa0985620:CDS |
AAACGAAAACTGTTATTCGG+CGG | 0.699988 | 6_4:+32326659 | Msa0985620:five_prime_UTR |
TGAACCAGCAACGGTCAAGG+CGG | 0.706128 | 6_4:+32327987 | Msa0985620:CDS |
TTTGGCGGAGGATGACGACG+AGG | 0.709591 | 6_4:-32335420 | None:intergenic |
AGTTAATATTAAGCTCACCA+AGG | 0.711240 | 6_4:-32333392 | None:intergenic |
TTTGGCGGAGGATGACAACG+GGG | 0.715338 | 6_4:-32335324 | None:intergenic |
TTTGCGTTTCATCTTCAACG+AGG | 0.724750 | 6_4:-32335396 | None:intergenic |
TTTGCGTTTCATCTTCAACG+AGG | 0.733661 | 6_4:-32335372 | None:intergenic |
GCCTACGCTAGAGATTCATG+AGG | 0.747101 | 6_4:+32329735 | Msa0985620:CDS |
TTAGGTCTTAAAATACACCG+AGG | 0.755633 | 6_4:+32332473 | Msa0985620:intron |
TGTGCACCAACCTTTCAACG+GGG | 0.809996 | 6_4:-32334216 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACTTACATTATTTTTTATA+GGG | + | chr6_4:32329933-32329952 | Msa0985620:intron | 10.0% |
!! | ACTAAAATATAAAATATCAA+AGG | - | chr6_4:32333245-32333264 | None:intergenic | 10.0% |
!! | TATCATATTCAAGATTATTA+GGG | - | chr6_4:32326866-32326885 | None:intergenic | 15.0% |
!! | TTATCATATTCAAGATTATT+AGG | - | chr6_4:32326867-32326886 | None:intergenic | 15.0% |
!!! | TTAATTGTTGTTGTTTTTAT+TGG | + | chr6_4:32327009-32327028 | Msa0985620:intron | 15.0% |
!!! | TTTTTGATTTTGTGATTTAT+TGG | + | chr6_4:32328066-32328085 | Msa0985620:intron | 15.0% |
!!! | AATGTTATCTAAATTTTGTA+TGG | + | chr6_4:32328770-32328789 | Msa0985620:intron | 15.0% |
!!! | GAACTTACATTATTTTTTAT+AGG | + | chr6_4:32329932-32329951 | Msa0985620:intron | 15.0% |
!! | AAAAAAAAGTAAAAACACAT+AGG | - | chr6_4:32330776-32330795 | None:intergenic | 15.0% |
!!! | TATTTGATAATAGTTACAAA+TGG | - | chr6_4:32331805-32331824 | None:intergenic | 15.0% |
!!! | ATAACATTTTAAAGTGTTTT+TGG | + | chr6_4:32332161-32332180 | Msa0985620:intron | 15.0% |
!!! | TTTGTTTTAACAGATTAAAT+TGG | + | chr6_4:32332285-32332304 | Msa0985620:intron | 15.0% |
!!! | TTGTTTTAACAGATTAAATT+GGG | + | chr6_4:32332286-32332305 | Msa0985620:intron | 15.0% |
!!! | AAATTGAAGTTTTATTAGTT+TGG | + | chr6_4:32332404-32332423 | Msa0985620:intron | 15.0% |
!!! | CATTGAATTAATTCTTTTAT+GGG | + | chr6_4:32333176-32333195 | Msa0985620:intron | 15.0% |
!!! | ATTGAATTAATTCTTTTATG+GGG | + | chr6_4:32333177-32333196 | Msa0985620:intron | 15.0% |
!!! | TTAATTTTTTGAATAGACAT+AGG | - | chr6_4:32334047-32334066 | None:intergenic | 15.0% |
!! | TAATATGCTTATAATCATAA+TGG | + | chr6_4:32334286-32334305 | Msa0985620:intron | 15.0% |
!!! | TTTTATTATATACTCATCAT+TGG | - | chr6_4:32334606-32334625 | None:intergenic | 15.0% |
!! | TTAATCGCTGTTATTATTAT+TGG | + | chr6_4:32327075-32327094 | Msa0985620:intron | 20.0% |
!! | TATATACACATACATAGTTT+AGG | + | chr6_4:32327344-32327363 | Msa0985620:intron | 20.0% |
!! | ATATACACATACATAGTTTA+GGG | + | chr6_4:32327345-32327364 | Msa0985620:intron | 20.0% |
!! | AACTGAAAAAGATAAAATGA+AGG | + | chr6_4:32327454-32327473 | Msa0985620:intron | 20.0% |
!!! | TTTGTTTTCATGGTTTTTTT+TGG | + | chr6_4:32327896-32327915 | Msa0985620:intron | 20.0% |
!! | GTTATTGTTGTGTTAAATAT+AGG | + | chr6_4:32328243-32328262 | Msa0985620:intron | 20.0% |
!! | TTCTATTGCTAAGAAAATAT+AGG | + | chr6_4:32328295-32328314 | Msa0985620:intron | 20.0% |
!! | TACAATACTATATTCATCTT+AGG | + | chr6_4:32328701-32328720 | Msa0985620:CDS | 20.0% |
!! | AATTCACAATGAAATAATGA+CGG | + | chr6_4:32329526-32329545 | Msa0985620:intron | 20.0% |
!!! | ATTTTATTGGCAATAATTTG+CGG | + | chr6_4:32329768-32329787 | Msa0985620:intron | 20.0% |
!!! | GTAATTGTTTTTGATACTTA+AGG | + | chr6_4:32329832-32329851 | Msa0985620:intron | 20.0% |
!! | TATGTATTAGTTATATGTTG+TGG | + | chr6_4:32330326-32330345 | Msa0985620:intron | 20.0% |
!! | TTGTCTTAATCTATGATTAT+GGG | + | chr6_4:32330404-32330423 | Msa0985620:intron | 20.0% |
!!! | TTGTATTTTAACACTAATCA+TGG | + | chr6_4:32330454-32330473 | Msa0985620:intron | 20.0% |
!! | AGTTCATATACAAAAATACA+TGG | - | chr6_4:32330654-32330673 | None:intergenic | 20.0% |
!!! | TATTTTTGTATATGAACTGA+AGG | + | chr6_4:32330656-32330675 | Msa0985620:intron | 20.0% |
!!! | ATTTTTGTATATGAACTGAA+GGG | + | chr6_4:32330657-32330676 | Msa0985620:intron | 20.0% |
!! | TATGAACATGAAAAACTATA+CGG | - | chr6_4:32330715-32330734 | None:intergenic | 20.0% |
!! | TAAAGTTTCTAAGTTATCTT+CGG | + | chr6_4:32331008-32331027 | Msa0985620:CDS | 20.0% |
!! | GTAGGTATTTATTGAATAAA+TGG | + | chr6_4:32331433-32331452 | Msa0985620:intron | 20.0% |
!!! | AATTTTCTTTTATAGGACTT+GGG | - | chr6_4:32331508-32331527 | None:intergenic | 20.0% |
!!! | AAATTTTCTTTTATAGGACT+TGG | - | chr6_4:32331509-32331528 | None:intergenic | 20.0% |
!!! | AAATGTTTTTCTACAATGAA+GGG | - | chr6_4:32331658-32331677 | None:intergenic | 20.0% |
!!! | TAAATGTTTTTCTACAATGA+AGG | - | chr6_4:32331659-32331678 | None:intergenic | 20.0% |
!! | ACTATAAATTTCAAAAGCTT+TGG | - | chr6_4:32331703-32331722 | None:intergenic | 20.0% |
!! | CATATTTCAATTGCAAATTA+AGG | - | chr6_4:32332137-32332156 | None:intergenic | 20.0% |
!! | AAAATCAATAATCGAGATAT+AGG | - | chr6_4:32332244-32332263 | None:intergenic | 20.0% |
!! | CTTATTGTGATTTATTGTTT+AGG | + | chr6_4:32332455-32332474 | Msa0985620:intron | 20.0% |
!! | TTGTTGGATAGAAATTTATT+AGG | + | chr6_4:32332689-32332708 | Msa0985620:intron | 20.0% |
!! | CCATAAAAGAATTAATTCAA+TGG | - | chr6_4:32333178-32333197 | None:intergenic | 20.0% |
!!! | CCATTGAATTAATTCTTTTA+TGG | + | chr6_4:32333175-32333194 | Msa0985620:intron | 20.0% |
!!! | CTTAATATTAACTTTGAGTT+GGG | + | chr6_4:32333402-32333421 | Msa0985620:CDS | 20.0% |
!!! | GTTTTAAGTTACAACTTTAA+CGG | - | chr6_4:32333501-32333520 | None:intergenic | 20.0% |
!! | ATTGGATAAAAGTCAATAAT+TGG | - | chr6_4:32333621-32333640 | None:intergenic | 20.0% |
!!! | ATTATTGACTTTTATCCAAT+AGG | + | chr6_4:32333621-32333640 | Msa0985620:CDS | 20.0% |
!! | CAACATCAAATATTACATAA+AGG | - | chr6_4:32333711-32333730 | None:intergenic | 20.0% |
!!! | TAATAAAATCCTTCCTTTTT+AGG | + | chr6_4:32333844-32333863 | Msa0985620:intron | 20.0% |
!!! | AATAAAATCCTTCCTTTTTA+GGG | + | chr6_4:32333845-32333864 | Msa0985620:intron | 20.0% |
!!! | AATTTTTTGAACTTGCTTTT+TGG | + | chr6_4:32334246-32334265 | Msa0985620:intron | 20.0% |
!! | TTGAAACTTATGAATTATGA+TGG | + | chr6_4:32334332-32334351 | Msa0985620:intron | 20.0% |
!! | ATAACAGTTTTCGTTTGTTT+TGG | - | chr6_4:32326655-32326674 | None:intergenic | 25.0% |
! | AACAAACGAAAACTGTTATT+CGG | + | chr6_4:32326656-32326675 | Msa0985620:five_prime_UTR | 25.0% |
! | TAACAAATTTCTTCCTTCTT+CGG | + | chr6_4:32326682-32326701 | Msa0985620:five_prime_UTR | 25.0% |
! | TATTCAAGATTATTAGGGTT+GGG | - | chr6_4:32326861-32326880 | None:intergenic | 25.0% |
! | ATATTCAAGATTATTAGGGT+TGG | - | chr6_4:32326862-32326881 | None:intergenic | 25.0% |
! | GGATGTTAATATATACTTCA+GGG | - | chr6_4:32327258-32327277 | None:intergenic | 25.0% |
! | TGGATGTTAATATATACTTC+AGG | - | chr6_4:32327259-32327278 | None:intergenic | 25.0% |
!! | TCATTGCTATTAAGATATCA+GGG | - | chr6_4:32327292-32327311 | None:intergenic | 25.0% |
! | CTTATTCTTAATGTTGTTCT+TGG | + | chr6_4:32327700-32327719 | Msa0985620:intron | 25.0% |
!!! | TCGGTTTTAAATTGTATAGA+TGG | + | chr6_4:32327944-32327963 | Msa0985620:intron | 25.0% |
! | ATTTAATATTTCGTGTGTAG+CGG | + | chr6_4:32328092-32328111 | Msa0985620:intron | 25.0% |
! | AATATACAAAACTCTGCTAT+TGG | + | chr6_4:32328177-32328196 | Msa0985620:intron | 25.0% |
! | ATATACAAAACTCTGCTATT+GGG | + | chr6_4:32328178-32328197 | Msa0985620:intron | 25.0% |
! | TAAAATTTCGCTACTCTATA+GGG | - | chr6_4:32328269-32328288 | None:intergenic | 25.0% |
! | TTAAAATTTCGCTACTCTAT+AGG | - | chr6_4:32328270-32328289 | None:intergenic | 25.0% |
!! | AATTTTTGACAAACTGCTAT+TGG | + | chr6_4:32328333-32328352 | Msa0985620:intron | 25.0% |
! | TGCTATTGGTCAAAAAATAT+AGG | + | chr6_4:32328347-32328366 | Msa0985620:intron | 25.0% |
! | TTAGCACTAAAACTACTATT+TGG | - | chr6_4:32328442-32328461 | None:intergenic | 25.0% |
!! | TGATTTTTGTGTATATCTGA+AGG | + | chr6_4:32328830-32328849 | Msa0985620:intron | 25.0% |
!!! | TCATTTTGTTGTTTTATGAC+AGG | + | chr6_4:32329083-32329102 | Msa0985620:intron | 25.0% |
!! | AATTGAAAAATGGACTTCAT+GGG | - | chr6_4:32329139-32329158 | None:intergenic | 25.0% |
!! | TAATTAACATGGTGTTAACA+TGG | - | chr6_4:32329238-32329257 | None:intergenic | 25.0% |
! | ATTAACACATTGGTCAATAA+TGG | + | chr6_4:32329328-32329347 | Msa0985620:intron | 25.0% |
! | TTAACACATTGGTCAATAAT+GGG | + | chr6_4:32329329-32329348 | Msa0985620:intron | 25.0% |
! | ATTCACAATGAAATAATGAC+GGG | + | chr6_4:32329527-32329546 | Msa0985620:intron | 25.0% |
! | GTTTGTAGTTTCTGAATATT+TGG | + | chr6_4:32329584-32329603 | Msa0985620:intron | 25.0% |
! | TACTTAAGGAATTATGATAC+CGG | + | chr6_4:32329846-32329865 | Msa0985620:intron | 25.0% |
! | CATTTCAGATAATAAAAGAC+CGG | - | chr6_4:32329868-32329887 | None:intergenic | 25.0% |
!! | TACTTTCTTGATAGTAACAA+TGG | + | chr6_4:32330042-32330061 | Msa0985620:intron | 25.0% |
! | GTTGTCTTAATCTATGATTA+TGG | + | chr6_4:32330403-32330422 | Msa0985620:intron | 25.0% |
! | AAAAAGTAAAAACACATAGG+AGG | - | chr6_4:32330773-32330792 | None:intergenic | 25.0% |
!!! | TTTATTGCCTTTTTTAACTG+AGG | - | chr6_4:32330968-32330987 | None:intergenic | 25.0% |
! | GATAACTTAGAAACTTTACT+GGG | - | chr6_4:32331006-32331025 | None:intergenic | 25.0% |
! | AGATAACTTAGAAACTTTAC+TGG | - | chr6_4:32331007-32331026 | None:intergenic | 25.0% |
! | AAAGTTTCTAAGTTATCTTC+GGG | + | chr6_4:32331009-32331028 | Msa0985620:CDS | 25.0% |
! | ATCTATTTCAAGACTATTCT+CGG | - | chr6_4:32331064-32331083 | None:intergenic | 25.0% |
!! | TATATAAGCTAAGCTTTTAC+TGG | + | chr6_4:32331129-32331148 | Msa0985620:intron | 25.0% |
!! | TTTTCAATGACAAATCAATG+TGG | + | chr6_4:32331847-32331866 | Msa0985620:intron | 25.0% |
!! | TTTTAGTATATACAGGTGTT+CGG | + | chr6_4:32332028-32332047 | Msa0985620:intron | 25.0% |
! | ATTTCAATTGCAAATTAAGG+CGG | - | chr6_4:32332134-32332153 | None:intergenic | 25.0% |
!! | GTTCTTTTTCTAATTTTCTC+TGG | + | chr6_4:32332552-32332571 | Msa0985620:intron | 25.0% |
!! | GCTTTCCTTTTCTTTTTATA+CGG | + | chr6_4:32332603-32332622 | Msa0985620:intron | 25.0% |
!! | AAGTACCGTATAAAAAGAAA+AGG | - | chr6_4:32332611-32332630 | None:intergenic | 25.0% |
!! | AACCAAATTTTGTCTTTTGT+TGG | + | chr6_4:32332673-32332692 | Msa0985620:intron | 25.0% |
! | ATCCAACAAAAGACAAAATT+TGG | - | chr6_4:32332678-32332697 | None:intergenic | 25.0% |
! | AAGAAATATCAGTAGAACAA+TGG | - | chr6_4:32332786-32332805 | None:intergenic | 25.0% |
! | AAAGAAAAAGAGACAATCAA+TGG | - | chr6_4:32333106-32333125 | None:intergenic | 25.0% |
! | ATAAAACCTGTTTCATAACA+AGG | - | chr6_4:32333334-32333353 | None:intergenic | 25.0% |
! | GCTTAATATTAACTTTGAGT+TGG | + | chr6_4:32333401-32333420 | Msa0985620:CDS | 25.0% |
! | ACAACTTTAACGGAAAAAAT+GGG | - | chr6_4:32333491-32333510 | None:intergenic | 25.0% |
! | TACAACTTTAACGGAAAAAA+TGG | - | chr6_4:32333492-32333511 | None:intergenic | 25.0% |
! | TGTATTATAGACATACCTAT+TGG | - | chr6_4:32333639-32333658 | None:intergenic | 25.0% |
!! | GTGTTGATAAAACTTAATGA+AGG | - | chr6_4:32333955-32333974 | None:intergenic | 25.0% |
! | AACTAAATCAGTCATGATAA+GGG | - | chr6_4:32334012-32334031 | None:intergenic | 25.0% |
! | TAACTAAATCAGTCATGATA+AGG | - | chr6_4:32334013-32334032 | None:intergenic | 25.0% |
! | TTCAAAAAATTAATAGCCAG+AGG | + | chr6_4:32334054-32334073 | Msa0985620:intron | 25.0% |
!!! | ATTGTTTTTTTTTCGAACCA+AGG | + | chr6_4:32334358-32334377 | Msa0985620:intron | 25.0% |
!! | ACTACTTTCTGATGTTATTT+AGG | + | chr6_4:32334455-32334474 | Msa0985620:intron | 25.0% |
!! | CTACTTTCTGATGTTATTTA+GGG | + | chr6_4:32334456-32334475 | Msa0985620:intron | 25.0% |
! | AAAAATGAAGCAAACGTAAA+GGG | - | chr6_4:32334686-32334705 | None:intergenic | 25.0% |
! | AAAAAATGAAGCAAACGTAA+AGG | - | chr6_4:32334687-32334706 | None:intergenic | 25.0% |
! | ATGAAACACTATAACATTCT+AGG | - | chr6_4:32334964-32334983 | None:intergenic | 25.0% |
! | TGCTGATCAAAATTGTTAAT+GGG | + | chr6_4:32335208-32335227 | Msa0985620:intron | 25.0% |
!! | TGTTGATAGTGTTCTGTTTA+GGG | - | chr6_4:32326626-32326645 | None:intergenic | 30.0% |
!! | TTGTTGATAGTGTTCTGTTT+AGG | - | chr6_4:32326627-32326646 | None:intergenic | 30.0% |
AACAAATTTCTTCCTTCTTC+GGG | + | chr6_4:32326683-32326702 | Msa0985620:five_prime_UTR | 30.0% | |
! | ATGTTTTCATCCTGAAGATA+GGG | + | chr6_4:32326920-32326939 | Msa0985620:CDS | 30.0% |
AAGAAAATTACCCTATCTTC+AGG | - | chr6_4:32326933-32326952 | None:intergenic | 30.0% | |
TTATTGGATTCGAAGAAATG+TGG | + | chr6_4:32327091-32327110 | Msa0985620:intron | 30.0% | |
!! | GTGGATGACTTTTAGTTATT+TGG | + | chr6_4:32327110-32327129 | Msa0985620:intron | 30.0% |
TACTTCAGGGATTAAATTGA+TGG | - | chr6_4:32327245-32327264 | None:intergenic | 30.0% | |
! | GTCATTGCTATTAAGATATC+AGG | - | chr6_4:32327293-32327312 | None:intergenic | 30.0% |
! | CTATTTTCACAAGCTTTCTT+TGG | - | chr6_4:32327546-32327565 | None:intergenic | 30.0% |
!!! | CATGAGTTTTGAGACTATTT+AGG | - | chr6_4:32327593-32327612 | None:intergenic | 30.0% |
TCAAATAAGCCAATACAAAC+AGG | + | chr6_4:32327626-32327645 | Msa0985620:intron | 30.0% | |
ATCACACTCACTTCAATTTA+GGG | - | chr6_4:32327652-32327671 | None:intergenic | 30.0% | |
TATCACACTCACTTCAATTT+AGG | - | chr6_4:32327653-32327672 | None:intergenic | 30.0% | |
CTTAATGTTGTTCTTGGATT+TGG | + | chr6_4:32327706-32327725 | Msa0985620:intron | 30.0% | |
GCATGTTTGATTACATTGAT+AGG | + | chr6_4:32327798-32327817 | Msa0985620:CDS | 30.0% | |
!!! | TCATGGTTTTTTTTGGTTGT+TGG | + | chr6_4:32327903-32327922 | Msa0985620:intron | 30.0% |
!! | GTGACGCTTAATTGATTTTT+CGG | + | chr6_4:32327925-32327944 | Msa0985620:intron | 30.0% |
!! | TTCCTGCTTCATTTTTATGT+CGG | + | chr6_4:32328205-32328224 | Msa0985620:intron | 30.0% |
ATCCTTCAAGATTTCTTTGA+AGG | - | chr6_4:32328917-32328936 | None:intergenic | 30.0% | |
TGATATATACCAAACCATAC+AGG | - | chr6_4:32328962-32328981 | None:intergenic | 30.0% | |
! | TTCCAATATTTTGCTACTCT+TGG | + | chr6_4:32328985-32329004 | Msa0985620:intron | 30.0% |
TTCCAAGAGTAGCAAAATAT+TGG | - | chr6_4:32328990-32329009 | None:intergenic | 30.0% | |
CTTCAATGCATTATCTATCT+TGG | + | chr6_4:32329040-32329059 | Msa0985620:intron | 30.0% | |
GATGCTGATATGATTATGTT+GGG | + | chr6_4:32329105-32329124 | Msa0985620:CDS | 30.0% | |
! | GAATTGAAAAATGGACTTCA+TGG | - | chr6_4:32329140-32329159 | None:intergenic | 30.0% |
! | CCTCTCTAAGAATTGAAAAA+TGG | - | chr6_4:32329149-32329168 | None:intergenic | 30.0% |
!! | CCATTTTTCAATTCTTAGAG+AGG | + | chr6_4:32329146-32329165 | Msa0985620:CDS | 30.0% |
TCAGGAGAATTTGATGAAAA+AGG | + | chr6_4:32329448-32329467 | Msa0985620:CDS | 30.0% | |
TTCACAATGAAATAATGACG+GGG | + | chr6_4:32329528-32329547 | Msa0985620:intron | 30.0% | |
CATTCAAAATCGATCTCAAA+AGG | - | chr6_4:32329655-32329674 | None:intergenic | 30.0% | |
!! | GATCGATTTTGAATGCATAT+TGG | + | chr6_4:32329660-32329679 | Msa0985620:CDS | 30.0% |
!!! | ATCTTCATTTGCTTTTTCGT+TGG | + | chr6_4:32329691-32329710 | Msa0985620:CDS | 30.0% |
! | AGGTAAGGGTTGTATTTTAT+TGG | + | chr6_4:32329755-32329774 | Msa0985620:intron | 30.0% |
TACATAGTCTTCAAGTATAC+AGG | + | chr6_4:32329808-32329827 | Msa0985620:intron | 30.0% | |
! | TGAAATGCACATTTTTATGC+CGG | + | chr6_4:32329881-32329900 | Msa0985620:intron | 30.0% |
!! | AACTTGATTAACTTGCTGAT+GGG | + | chr6_4:32329963-32329982 | Msa0985620:CDS | 30.0% |
AGTATACAAGAAGGAACTTA+AGG | + | chr6_4:32329986-32330005 | Msa0985620:CDS | 30.0% | |
GTATACAAGAAGGAACTTAA+GGG | + | chr6_4:32329987-32330006 | Msa0985620:CDS | 30.0% | |
! | ATAGTAACAATGGTGATGAT+TGG | + | chr6_4:32330052-32330071 | Msa0985620:intron | 30.0% |
AAATTTGGCTGAGAAAAGAA+GGG | - | chr6_4:32330141-32330160 | None:intergenic | 30.0% | |
AGGAAACAATGATGAGTATT+CGG | + | chr6_4:32330368-32330387 | Msa0985620:CDS | 30.0% | |
ACACTAATCATGGTTCATAA+TGG | + | chr6_4:32330464-32330483 | Msa0985620:intron | 30.0% | |
! | ACAAAGGTACAGCATAAATA+CGG | - | chr6_4:32330585-32330604 | None:intergenic | 30.0% |
! | TTTTATATAGCTCCAGCTAA+CGG | + | chr6_4:32330792-32330811 | Msa0985620:intron | 30.0% |
GATGTATGTTATTCTACTTC+AGG | + | chr6_4:32331081-32331100 | Msa0985620:intron | 30.0% | |
GACTTGAAAATAAAGCTGAA+GGG | + | chr6_4:32331297-32331316 | Msa0985620:CDS | 30.0% | |
ACTTGAAAATAAAGCTGAAG+GGG | + | chr6_4:32331298-32331317 | Msa0985620:CDS | 30.0% | |
AGAACACATATAATTGTGTC+TGG | + | chr6_4:32331384-32331403 | Msa0985620:intron | 30.0% | |
! | GGAATTTTGAACTTCATTGA+TGG | + | chr6_4:32331405-32331424 | Msa0985620:intron | 30.0% |
CGTAAGGAAGGATATATATT+AGG | + | chr6_4:32331472-32331491 | Msa0985620:intron | 30.0% | |
! | ATGTAATTTTCCCTGCAATA+TGG | + | chr6_4:32331582-32331601 | Msa0985620:intron | 30.0% |
! | TGTAATTTTCCCTGCAATAT+GGG | + | chr6_4:32331583-32331602 | Msa0985620:intron | 30.0% |
TCACCAGAAAACATTAAAAG+CGG | - | chr6_4:32331627-32331646 | None:intergenic | 30.0% | |
!! | TGCCTGATTTTAGTATATAC+AGG | + | chr6_4:32332021-32332040 | Msa0985620:intron | 30.0% |
CACCTGTATATACTAAAATC+AGG | - | chr6_4:32332026-32332045 | None:intergenic | 30.0% | |
!! | TTTTGATTCATGTGAAGATC+TGG | + | chr6_4:32332427-32332446 | Msa0985620:intron | 30.0% |
TTTGATTCATGTGAAGATCT+GGG | + | chr6_4:32332428-32332447 | Msa0985620:intron | 30.0% | |
GTGATGCATTATTACTATGA+AGG | + | chr6_4:32332507-32332526 | Msa0985620:CDS | 30.0% | |
! | GTATGAATCTTAAGTTGTGT+TGG | + | chr6_4:32332581-32332600 | Msa0985620:intron | 30.0% |
ATTTCTTTGTAGATCATGTG+TGG | + | chr6_4:32332799-32332818 | Msa0985620:intron | 30.0% | |
GTGGTATATGATATTCTTAG+TGG | + | chr6_4:32332818-32332837 | Msa0985620:intron | 30.0% | |
!!! | AGTGTTGGCCTTTTTTATTT+CGG | - | chr6_4:32332922-32332941 | None:intergenic | 30.0% |
AAATAAAAAAGGCCAACACT+TGG | + | chr6_4:32332922-32332941 | Msa0985620:intron | 30.0% | |
GTTAGTTCATAACTCTCTTA+AGG | + | chr6_4:32332962-32332981 | Msa0985620:intron | 30.0% | |
! | ATTTAAGATCTGTCATGAAG+AGG | + | chr6_4:32333009-32333028 | Msa0985620:intron | 30.0% |
! | TGAAGAGGTTTGTTTAGTAT+AGG | + | chr6_4:32333024-32333043 | Msa0985620:intron | 30.0% |
! | TTGTCTCTTTTTCTTTGTCA+AGG | + | chr6_4:32333110-32333129 | Msa0985620:intron | 30.0% |
! | CAAAGGCAATGAAAGTATAA+AGG | - | chr6_4:32333228-32333247 | None:intergenic | 30.0% |
CTAATAATGTGTATGCACTA+TGG | - | chr6_4:32333271-32333290 | None:intergenic | 30.0% | |
AGTTAATATTAAGCTCACCA+AGG | - | chr6_4:32333395-32333414 | None:intergenic | 30.0% | |
TCAGTCATAAGTTTCCTATA+CGG | - | chr6_4:32333588-32333607 | None:intergenic | 30.0% | |
ATAAAAGTCAATAATTGGCG+AGG | - | chr6_4:32333616-32333635 | None:intergenic | 30.0% | |
ACTAAATCAGTCATGATAAG+GGG | - | chr6_4:32334011-32334030 | None:intergenic | 30.0% | |
! | ATGTTTCTTATTTGCTGCAT+TGG | + | chr6_4:32334736-32334755 | Msa0985620:intron | 30.0% |
ATTGTCATAGTCTGTAGAAA+AGG | - | chr6_4:32335035-32335054 | None:intergenic | 30.0% | |
TTTCTACAGACTATGACAAT+TGG | + | chr6_4:32335035-32335054 | Msa0985620:intron | 30.0% | |
TTCTACAGACTATGACAATT+GGG | + | chr6_4:32335036-32335055 | Msa0985620:intron | 30.0% | |
TTATTTACCATTGAACAGCA+TGG | + | chr6_4:32335170-32335189 | Msa0985620:intron | 30.0% | |
!! | CATTAACAATTTTGATCAGC+AGG | - | chr6_4:32335209-32335228 | None:intergenic | 30.0% |
CTGCTGATCAAAATTGTTAA+TGG | + | chr6_4:32335207-32335226 | Msa0985620:intron | 30.0% | |
GCTGATCAAAATTGTTAATG+GGG | + | chr6_4:32335209-32335228 | Msa0985620:intron | 30.0% | |
AAACGAAAACTGTTATTCGG+CGG | + | chr6_4:32326659-32326678 | Msa0985620:five_prime_UTR | 35.0% | |
ACAAATTTCTTCCTTCTTCG+GGG | + | chr6_4:32326684-32326703 | Msa0985620:five_prime_UTR | 35.0% | |
CTATCTTCAGGATGAAAACA+TGG | - | chr6_4:32326921-32326940 | None:intergenic | 35.0% | |
! | CATGTTTTCATCCTGAAGAT+AGG | + | chr6_4:32326919-32326938 | Msa0985620:CDS | 35.0% |
GATATCAGGGACTAAATTGA+TGG | - | chr6_4:32327279-32327298 | None:intergenic | 35.0% | |
AATAGCAATGACTGAATCGA+TGG | + | chr6_4:32327301-32327320 | Msa0985620:intron | 35.0% | |
CTGCAAATAAGATGTTCACT+TGG | - | chr6_4:32327372-32327391 | None:intergenic | 35.0% | |
GCTTATTTGAGCTTATCTAC+TGG | - | chr6_4:32327616-32327635 | None:intergenic | 35.0% | |
! | AATTTAGGGCCTGTTTGTAT+TGG | - | chr6_4:32327638-32327657 | None:intergenic | 35.0% |
TGAAGTGAGTGTGATAGTTT+AGG | + | chr6_4:32327657-32327676 | Msa0985620:intron | 35.0% | |
GAAGTGAGTGTGATAGTTTA+GGG | + | chr6_4:32327658-32327677 | Msa0985620:intron | 35.0% | |
TTGGAGAAACGTGAATGATT+TGG | + | chr6_4:32327725-32327744 | Msa0985620:intron | 35.0% | |
CATTGATAGGCTGTTTAACA+TGG | + | chr6_4:32327811-32327830 | Msa0985620:CDS | 35.0% | |
AAGCTTCTCTTTATGGCTAT+TGG | + | chr6_4:32327845-32327864 | Msa0985620:CDS | 35.0% | |
TGTCTTCTATCTTTGTTCTC+TGG | + | chr6_4:32327870-32327889 | Msa0985620:intron | 35.0% | |
!! | TCTCTGGTTGTTTGTTTTCA+TGG | + | chr6_4:32327886-32327905 | Msa0985620:intron | 35.0% |
AACCGACATAAAAATGAAGC+AGG | - | chr6_4:32328210-32328229 | None:intergenic | 35.0% | |
TATTGCTGAGTAATAGCAGT+TGG | - | chr6_4:32328397-32328416 | None:intergenic | 35.0% | |
ATGCTCAACTTTAATCTCAC+TGG | + | chr6_4:32328469-32328488 | Msa0985620:intron | 35.0% | |
TGCTCAACTTTAATCTCACT+GGG | + | chr6_4:32328470-32328489 | Msa0985620:intron | 35.0% | |
GATAGGCTATTGAAGAATCA+AGG | + | chr6_4:32328560-32328579 | Msa0985620:intron | 35.0% | |
! | ATTTCTTTGAAGGCGGATAT+AGG | - | chr6_4:32328907-32328926 | None:intergenic | 35.0% |
! | CTTCAAGATTTCTTTGAAGG+CGG | - | chr6_4:32328914-32328933 | None:intergenic | 35.0% |
GGATGCTGATATGATTATGT+TGG | + | chr6_4:32329104-32329123 | Msa0985620:intron | 35.0% | |
TGATATGATTATGTTGGGTC+TGG | + | chr6_4:32329110-32329129 | Msa0985620:CDS | 35.0% | |
TAGGAAAGTCTGACAGAAAA+TGG | - | chr6_4:32329305-32329324 | None:intergenic | 35.0% | |
! | ATTTTCTGTCAGACTTTCCT+AGG | + | chr6_4:32329304-32329323 | Msa0985620:intron | 35.0% |
! | TTTTCTGTCAGACTTTCCTA+GGG | + | chr6_4:32329305-32329324 | Msa0985620:intron | 35.0% |
TTTCCTAGGGATTAACACAT+TGG | + | chr6_4:32329318-32329337 | Msa0985620:intron | 35.0% | |
!! | GGTCAATAATGGGTTATTTC+AGG | + | chr6_4:32329339-32329358 | Msa0985620:intron | 35.0% |
!! | TTTCAGGTTGTATTTACTCC+TGG | + | chr6_4:32329355-32329374 | Msa0985620:intron | 35.0% |
AAATGCTTGTGTGGTCAAAT+GGG | + | chr6_4:32329385-32329404 | Msa0985620:CDS | 35.0% | |
TTCTGAATATTTGGACTCTG+AGG | + | chr6_4:32329593-32329612 | Msa0985620:CDS | 35.0% | |
TCTGAATATTTGGACTCTGA+GGG | + | chr6_4:32329594-32329613 | Msa0985620:CDS | 35.0% | |
TCAAAATCGATCTCAAAAGG+AGG | - | chr6_4:32329652-32329671 | None:intergenic | 35.0% | |
AAGACTATGTACTCTCGTTA+AGG | - | chr6_4:32329799-32329818 | None:intergenic | 35.0% | |
TATCAGTTGCATAACCTTAC+CGG | - | chr6_4:32329903-32329922 | None:intergenic | 35.0% | |
!! | GAACTTGATTAACTTGCTGA+TGG | + | chr6_4:32329962-32329981 | Msa0985620:CDS | 35.0% |
AAGAAGGAACTTAAGGGAAT+GGG | + | chr6_4:32329993-32330012 | Msa0985620:CDS | 35.0% | |
ATATTTGACAAGCGGTAGTA+AGG | + | chr6_4:32330019-32330038 | Msa0985620:CDS | 35.0% | |
ACACACAAGCTTGATTTAGA+TGG | - | chr6_4:32330103-32330122 | None:intergenic | 35.0% | |
AATTTGGCTGAGAAAAGAAG+GGG | - | chr6_4:32330140-32330159 | None:intergenic | 35.0% | |
CAAATTTGGCTGAGAAAAGA+AGG | - | chr6_4:32330142-32330161 | None:intergenic | 35.0% | |
TATTAGCCAGCAGTATGATT+TGG | + | chr6_4:32330272-32330291 | Msa0985620:intron | 35.0% | |
AAAGATGCAACTAGATACGA+AGG | - | chr6_4:32330508-32330527 | None:intergenic | 35.0% | |
! | TCTTTTCCCCAATGAAAACA+AGG | + | chr6_4:32330523-32330542 | Msa0985620:intron | 35.0% |
!!! | TCTCTACCTTGTTTTCATTG+GGG | - | chr6_4:32330532-32330551 | None:intergenic | 35.0% |
!!! | CTCTCTACCTTGTTTTCATT+GGG | - | chr6_4:32330533-32330552 | None:intergenic | 35.0% |
!!! | TCTCTCTACCTTGTTTTCAT+TGG | - | chr6_4:32330534-32330553 | None:intergenic | 35.0% |
CATAAATACGGCACAGATAT+TGG | - | chr6_4:32330573-32330592 | None:intergenic | 35.0% | |
!!! | TTGCCTTTTTTAACTGAGGT+GGG | - | chr6_4:32330964-32330983 | None:intergenic | 35.0% |
!!! | ATTGCCTTTTTTAACTGAGG+TGG | - | chr6_4:32330965-32330984 | None:intergenic | 35.0% |
GCAATAAAGAAGTCTTTGAG+AGG | + | chr6_4:32330980-32330999 | Msa0985620:CDS | 35.0% | |
ATGTTATTCTACTTCAGGAG+AGG | + | chr6_4:32331086-32331105 | Msa0985620:intron | 35.0% | |
TTAGTATTCTTCTGCTCTAC+AGG | + | chr6_4:32331257-32331276 | Msa0985620:intron | 35.0% | |
CGACTTGAAAATAAAGCTGA+AGG | + | chr6_4:32331296-32331315 | Msa0985620:CDS | 35.0% | |
TCTGATGTGTTCAACTCAAA+AGG | + | chr6_4:32331336-32331355 | Msa0985620:CDS | 35.0% | |
CATGTAAATTATCCTGCGTA+AGG | + | chr6_4:32331456-32331475 | Msa0985620:intron | 35.0% | |
TAAATTATCCTGCGTAAGGA+AGG | + | chr6_4:32331460-32331479 | Msa0985620:intron | 35.0% | |
ATATATATCCTTCCTTACGC+AGG | - | chr6_4:32331471-32331490 | None:intergenic | 35.0% | |
ACCAGAAAACATTAAAAGCG+GGG | - | chr6_4:32331625-32331644 | None:intergenic | 35.0% | |
CACCAGAAAACATTAAAAGC+GGG | - | chr6_4:32331626-32331645 | None:intergenic | 35.0% | |
TACGGAAAGATGTTGTAAGT+TGG | + | chr6_4:32332380-32332399 | Msa0985620:intron | 35.0% | |
ACGGAAAGATGTTGTAAGTT+GGG | + | chr6_4:32332381-32332400 | Msa0985620:intron | 35.0% | |
TTAGGTCTTAAAATACACCG+AGG | + | chr6_4:32332473-32332492 | Msa0985620:intron | 35.0% | |
TAGGTCTTAAAATACACCGA+GGG | + | chr6_4:32332474-32332493 | Msa0985620:intron | 35.0% | |
!! | ACTATGAAGGTGTTTGTTCT+TGG | + | chr6_4:32332520-32332539 | Msa0985620:CDS | 35.0% |
!!! | AGCACGCACTACTATTTTTT+GGG | - | chr6_4:32332738-32332757 | None:intergenic | 35.0% |
!!! | AAGCACGCACTACTATTTTT+TGG | - | chr6_4:32332739-32332758 | None:intergenic | 35.0% |
GAACAATGGTAAAACAAGTC+AGG | - | chr6_4:32332772-32332791 | None:intergenic | 35.0% | |
!! | TTTTTATTTCGGACATGGGT+CGG | - | chr6_4:32332911-32332930 | None:intergenic | 35.0% |
ACCCATGTCCGAAATAAAAA+AGG | + | chr6_4:32332911-32332930 | Msa0985620:intron | 35.0% | |
!!! | GCCTTTTTTATTTCGGACAT+GGG | - | chr6_4:32332915-32332934 | None:intergenic | 35.0% |
ATGAAATTGTAGCCAAGTGT+TGG | - | chr6_4:32332937-32332956 | None:intergenic | 35.0% | |
CTTGGCTACAATTTCATGTT+TGG | + | chr6_4:32332940-32332959 | Msa0985620:intron | 35.0% | |
AGTTCATAACTCTCTTAAGG+AGG | + | chr6_4:32332965-32332984 | Msa0985620:intron | 35.0% | |
GAAGATTCACAATCTCAACA+GGG | - | chr6_4:32333076-32333095 | None:intergenic | 35.0% | |
CTGTTGAGATTGTGAATCTT+CGG | + | chr6_4:32333075-32333094 | Msa0985620:intron | 35.0% | |
! | ATGATAACTTGCAATCGGAA+AGG | - | chr6_4:32333151-32333170 | None:intergenic | 35.0% |
TTTCCGATTGCAAGTTATCA+TGG | + | chr6_4:32333150-32333169 | Msa0985620:intron | 35.0% | |
! | GAACCATGATAACTTGCAAT+CGG | - | chr6_4:32333156-32333175 | None:intergenic | 35.0% |
TATGGGGAAAATGAGAGATA+AGG | + | chr6_4:32333193-32333212 | Msa0985620:intron | 35.0% | |
! | CTGATTCCTTGTTATGAAAC+AGG | + | chr6_4:32333325-32333344 | Msa0985620:intron | 35.0% |
AGCTGATCAAATGGTTTGAA+TGG | - | chr6_4:32333432-32333451 | None:intergenic | 35.0% | |
AAACCATTTGATCAGCTTCT+TGG | + | chr6_4:32333435-32333454 | Msa0985620:CDS | 35.0% | |
AACTTCGCAATACCCTAAAA+AGG | - | chr6_4:32333860-32333879 | None:intergenic | 35.0% | |
AGACGCACTTCATCAATAAA+AGG | - | chr6_4:32333884-32333903 | None:intergenic | 35.0% | |
AAAAAATAGACCCCGTTGAA+AGG | + | chr6_4:32334206-32334225 | Msa0985620:CDS | 35.0% | |
TGCTTATAATCATAATGGCG+AGG | + | chr6_4:32334291-32334310 | Msa0985620:intron | 35.0% | |
TTATTTAGGGATACATGCAG+TGG | + | chr6_4:32334469-32334488 | Msa0985620:intron | 35.0% | |
GGTTACATATCCTTATGTAG+TGG | + | chr6_4:32334502-32334521 | Msa0985620:CDS | 35.0% | |
TTCAGAAACTTAACTCCATG+TGG | - | chr6_4:32334818-32334837 | None:intergenic | 35.0% | |
GAGCACTATTAATAAGCAGT+AGG | - | chr6_4:32334860-32334879 | None:intergenic | 35.0% | |
ATTCTAGGTAGAACACAGTA+TGG | - | chr6_4:32334949-32334968 | None:intergenic | 35.0% | |
TCTACAGACTATGACAATTG+GGG | + | chr6_4:32335037-32335056 | Msa0985620:intron | 35.0% | |
TCAAAATTGTTAATGGGGCT+CGG | + | chr6_4:32335214-32335233 | Msa0985620:intron | 35.0% | |
ATTGTAGCTATCGACGATTT+GGG | - | chr6_4:32335507-32335526 | None:intergenic | 35.0% | |
AATTGTAGCTATCGACGATT+TGG | - | chr6_4:32335508-32335527 | None:intergenic | 35.0% | |
! | TCCTTGGCTTTCAAATTGAT+GGG | - | chr6_4:32335578-32335597 | None:intergenic | 35.0% |
! | TTCCTTGGCTTTCAAATTGA+TGG | - | chr6_4:32335579-32335598 | None:intergenic | 35.0% |
ACCGCATCAATGATAACCAT+CGG | - | chr6_4:32326777-32326796 | None:intergenic | 40.0% | |
!! | TTGGGTTTGCTAGTGTCTAT+CGG | - | chr6_4:32326843-32326862 | None:intergenic | 40.0% |
GAATGATACCATTCATGTCG+AGG | - | chr6_4:32326896-32326915 | None:intergenic | 40.0% | |
ATAGGCTGTTTAACATGGTG+CGG | + | chr6_4:32327816-32327835 | Msa0985620:CDS | 40.0% | |
TGCTAAAGATGCATCTGATG+CGG | + | chr6_4:32328018-32328037 | Msa0985620:CDS | 40.0% | |
TATAGACCAATGCTGCACAT+TGG | + | chr6_4:32328130-32328149 | Msa0985620:intron | 40.0% | |
CTGTTGTTCTCTTGTGTGAT+AGG | + | chr6_4:32328543-32328562 | Msa0985620:intron | 40.0% | |
TGAAGAATCAAGGTTACGAG+AGG | + | chr6_4:32328570-32328589 | Msa0985620:CDS | 40.0% | |
GTTACGAGAGGAATTTGAGA+GGG | + | chr6_4:32328582-32328601 | Msa0985620:CDS | 40.0% | |
CAGAAAACTTCCTCCTAAAG+AGG | + | chr6_4:32328609-32328628 | Msa0985620:CDS | 40.0% | |
ACTTCCTCCTAAAGAGGAAT+CGG | + | chr6_4:32328615-32328634 | Msa0985620:CDS | 40.0% | |
!! | AAAGTTGCCGATTCCTCTTT+AGG | - | chr6_4:32328625-32328644 | None:intergenic | 40.0% |
GATTCAAATGTCATCACACC+TGG | + | chr6_4:32328646-32328665 | Msa0985620:CDS | 40.0% | |
!! | CTTAGGTTGAACAATGATCC+TGG | + | chr6_4:32328718-32328737 | Msa0985620:CDS | 40.0% |
TCCTGGTTGGAGTAACATAA+AGG | + | chr6_4:32328735-32328754 | Msa0985620:CDS | 40.0% | |
ACCTTTATGTTACTCCAACC+AGG | - | chr6_4:32328739-32328758 | None:intergenic | 40.0% | |
CTTTCTGATGCAAATGTTCC+CGG | + | chr6_4:32328858-32328877 | Msa0985620:CDS | 40.0% | |
CGCCTTCAAAGAAATCTTGA+AGG | + | chr6_4:32328912-32328931 | Msa0985620:CDS | 40.0% | |
TGACCAATGTGTTAATCCCT+AGG | - | chr6_4:32329324-32329343 | None:intergenic | 40.0% | |
CAAATGCTTGTGTGGTCAAA+TGG | + | chr6_4:32329384-32329403 | Msa0985620:CDS | 40.0% | |
ACTGTGAAGGAAAGGCTAAA+AGG | + | chr6_4:32329422-32329441 | Msa0985620:CDS | 40.0% | |
TGTTGCTAAAAAGCCTTTCC+AGG | + | chr6_4:32329480-32329499 | Msa0985620:CDS | 40.0% | |
TAAAAAGCCTTTCCAGGTCA+GGG | + | chr6_4:32329486-32329505 | Msa0985620:intron | 40.0% | |
ATTTATCTCAAACCCTGACC+TGG | - | chr6_4:32329501-32329520 | None:intergenic | 40.0% | |
! | ATGAAATAATGACGGGGCTT+TGG | + | chr6_4:32329534-32329553 | Msa0985620:intron | 40.0% |
! | TGAAATAATGACGGGGCTTT+GGG | + | chr6_4:32329535-32329554 | Msa0985620:intron | 40.0% |
TCGATCTCAAAAGGAGGATT+AGG | - | chr6_4:32329646-32329665 | None:intergenic | 40.0% | |
GCTAGAGATTCATGAGGTAA+GGG | + | chr6_4:32329741-32329760 | Msa0985620:intron | 40.0% | |
! | TGCACATTTTTATGCCGGTA+AGG | + | chr6_4:32329886-32329905 | Msa0985620:intron | 40.0% |
CAAGAAGGAACTTAAGGGAA+TGG | + | chr6_4:32329992-32330011 | Msa0985620:CDS | 40.0% | |
ATGGGTGGATATTTGACAAG+CGG | + | chr6_4:32330011-32330030 | Msa0985620:CDS | 40.0% | |
! | CAGAGTCGAGCATTTTATTC+AGG | + | chr6_4:32330164-32330183 | Msa0985620:CDS | 40.0% |
! | GAGCATTTTATTCAGGCTGT+TGG | + | chr6_4:32330171-32330190 | Msa0985620:CDS | 40.0% |
TGCAACAGGTATGTTGATCT+AGG | + | chr6_4:32330232-32330251 | Msa0985620:intron | 40.0% | |
GTGGCTGATCTTGAAATAGT+TGG | + | chr6_4:32330345-32330364 | Msa0985620:CDS | 40.0% | |
GCTGATCTTGAAATAGTTGG+AGG | + | chr6_4:32330348-32330367 | Msa0985620:CDS | 40.0% | |
ATGATGAGTATTCGGTATGC+TGG | + | chr6_4:32330376-32330395 | Msa0985620:intron | 40.0% | |
CACAGATATTGGACATAGAC+TGG | - | chr6_4:32330562-32330581 | None:intergenic | 40.0% | |
TTTATGCTGTACCTTTGTGC+TGG | + | chr6_4:32330587-32330606 | Msa0985620:intron | 40.0% | |
TGTACCTTTGTGCTGGAAAA+TGG | + | chr6_4:32330594-32330613 | Msa0985620:intron | 40.0% | |
GTACCTTTGTGCTGGAAAAT+GGG | + | chr6_4:32330595-32330614 | Msa0985620:intron | 40.0% | |
TTATTCTTTCCACCGTTAGC+TGG | - | chr6_4:32330807-32330826 | None:intergenic | 40.0% | |
AAGCAAGAGGAGATACTGTT+GGG | + | chr6_4:32330842-32330861 | Msa0985620:CDS | 40.0% | |
AAGACGAGAATCGTGGAATT+TGG | - | chr6_4:32330902-32330921 | None:intergenic | 40.0% | |
CTGCACCATTTCAACAATCT+GGG | + | chr6_4:32330938-32330957 | Msa0985620:CDS | 40.0% | |
CTAAGAGTTCTACTTTGAGC+TGG | + | chr6_4:32331210-32331229 | Msa0985620:intron | 40.0% | |
GATGTGTTCAACTCAAAAGG+TGG | + | chr6_4:32331339-32331358 | Msa0985620:CDS | 40.0% | |
! | ACTTCATTGATGGTCGAAGT+AGG | + | chr6_4:32331415-32331434 | Msa0985620:intron | 40.0% |
!! | TCCCCGCTTTTAATGTTTTC+TGG | + | chr6_4:32331621-32331640 | Msa0985620:intron | 40.0% |
AGTTTACTGAGTGACCGATA+TGG | + | chr6_4:32331720-32331739 | Msa0985620:intron | 40.0% | |
GTTTACTGAGTGACCGATAT+GGG | + | chr6_4:32331721-32331740 | Msa0985620:intron | 40.0% | |
TTTACTGAGTGACCGATATG+GGG | + | chr6_4:32331722-32331741 | Msa0985620:intron | 40.0% | |
CAACTAAAGAACCCCCATAT+CGG | - | chr6_4:32331737-32331756 | None:intergenic | 40.0% | |
! | AGTTGAAGCATCAGCTTTGA+AGG | + | chr6_4:32331774-32331793 | Msa0985620:intron | 40.0% |
TGTCGTTGCTACAAACAACT+AGG | - | chr6_4:32331874-32331893 | None:intergenic | 40.0% | |
AGTTGTTTGTAGCAACGACA+AGG | + | chr6_4:32331874-32331893 | Msa0985620:intron | 40.0% | |
ACGACAAGGCAAATTTCAAG+TGG | + | chr6_4:32331888-32331907 | Msa0985620:intron | 40.0% | |
AAGTGGTTCAATCAACCTCT+TGG | + | chr6_4:32331905-32331924 | Msa0985620:intron | 40.0% | |
! | TGGTAAGCTTTTCCCATCAT+GGG | - | chr6_4:32331953-32331972 | None:intergenic | 40.0% |
! | ATGGTAAGCTTTTCCCATCA+TGG | - | chr6_4:32331954-32331973 | None:intergenic | 40.0% |
TTGTGTAGGCTTGTAGCATA+TGG | - | chr6_4:32332099-32332118 | None:intergenic | 40.0% | |
TACAAGCCTACACAATGACT+GGG | + | chr6_4:32332104-32332123 | Msa0985620:intron | 40.0% | |
CAGATTAAATTGGGAGAACC+AGG | + | chr6_4:32332295-32332314 | Msa0985620:intron | 40.0% | |
!! | CTGGAAAGAGAGGTATTATG+AGG | + | chr6_4:32332318-32332337 | Msa0985620:CDS | 40.0% |
! | AAGGTGTTTGTTCTTGGCAA+TGG | + | chr6_4:32332526-32332545 | Msa0985620:CDS | 40.0% |
GTTATCGCAGTTTCTCATCA+TGG | - | chr6_4:32332656-32332675 | None:intergenic | 40.0% | |
!!! | CACGCACTACTATTTTTTGG+GGG | - | chr6_4:32332736-32332755 | None:intergenic | 40.0% |
!!! | GCACGCACTACTATTTTTTG+GGG | - | chr6_4:32332737-32332756 | None:intergenic | 40.0% |
!!! | GGCCTTTTTTATTTCGGACA+TGG | - | chr6_4:32332916-32332935 | None:intergenic | 40.0% |
CGAAGATTCACAATCTCAAC+AGG | - | chr6_4:32333077-32333096 | None:intergenic | 40.0% | |
! | ATAACTTGCAATCGGAAAGG+AGG | - | chr6_4:32333148-32333167 | None:intergenic | 40.0% |
ACTCCAAGAAGCTGATCAAA+TGG | - | chr6_4:32333441-32333460 | None:intergenic | 40.0% | |
ATAGCAATAAACCTTGCAGC+AGG | - | chr6_4:32333468-32333487 | None:intergenic | 40.0% | |
ATAAGTTTCCTATACGGCTC+AGG | - | chr6_4:32333582-32333601 | None:intergenic | 40.0% | |
AAGTCAATAATTGGCGAGGT+TGG | - | chr6_4:32333612-32333631 | None:intergenic | 40.0% | |
!! | GACTTTGAAGTGGACATGAA+TGG | + | chr6_4:32333738-32333757 | Msa0985620:intron | 40.0% |
AGATAAGAGCAGATGTAACG+AGG | - | chr6_4:32333791-32333810 | None:intergenic | 40.0% | |
AAACAATGTTGCTGTCATGC+TGG | - | chr6_4:32333823-32333842 | None:intergenic | 40.0% | |
TCGCAATACCCTAAAAAGGA+AGG | - | chr6_4:32333856-32333875 | None:intergenic | 40.0% | |
AATCAGTCATGATAAGGGGA+AGG | - | chr6_4:32334007-32334026 | None:intergenic | 40.0% | |
! | TTGTCCTTTTGCTTTGTCCT+TGG | - | chr6_4:32334378-32334397 | None:intergenic | 40.0% |
TTATGATCACAGATCTGACG+AGG | + | chr6_4:32334633-32334652 | Msa0985620:intron | 40.0% | |
GTGTGCAAAAAAGTTCTGCT+AGG | - | chr6_4:32334662-32334681 | None:intergenic | 40.0% | |
GCTATATGTTCATGTGCATC+TGG | - | chr6_4:32334788-32334807 | None:intergenic | 40.0% | |
AGAAACTTAACTCCATGTGG+TGG | - | chr6_4:32334815-32334834 | None:intergenic | 40.0% | |
GGTTCATTGCTTAATTCCAG+TGG | + | chr6_4:32334909-32334928 | Msa0985620:intron | 40.0% | |
GGTCTTGCTAATTAAACCAC+TGG | - | chr6_4:32334928-32334947 | None:intergenic | 40.0% | |
TAAAACCTGAACCTGTTCCA+TGG | + | chr6_4:32335063-32335082 | Msa0985620:CDS | 40.0% | |
TTCCATGGCATGAAGCTAAT+GGG | + | chr6_4:32335078-32335097 | Msa0985620:CDS | 40.0% | |
ATACAACGAAAGTGGAAGGT+AGG | + | chr6_4:32335106-32335125 | Msa0985620:intron | 40.0% | |
AGATACTCCATGCTGTTCAA+TGG | - | chr6_4:32335180-32335199 | None:intergenic | 40.0% | |
TTTGCGTTTCATCTTCAACG+AGG | - | chr6_4:32335375-32335394 | None:intergenic | 40.0% | |
TTTGCGTTTCATCTTCAACG+AGG | - | chr6_4:32335375-32335394 | None:intergenic | 40.0% | |
GGATACGTGAACTGGAATAA+CGG | - | chr6_4:32335452-32335471 | None:intergenic | 40.0% | |
! | TTGTTTGAGATGCTGAGCAT+GGG | - | chr6_4:32335543-32335562 | None:intergenic | 40.0% |
! | CCTTGGCTTTCAAATTGATG+GGG | - | chr6_4:32335577-32335596 | None:intergenic | 40.0% |
!!! | TTAGGGTTTTGGAGCTTTTG+AGG | - | chr6_4:32335631-32335650 | None:intergenic | 40.0% |
!!! | GGTTTTGGACTTTAGGGTTT+TGG | - | chr6_4:32335642-32335661 | None:intergenic | 40.0% |
!!! | GCTTAGGGTTTTGGACTTTA+GGG | - | chr6_4:32335648-32335667 | None:intergenic | 40.0% |
CCAAAGAGAAGAAACTTTCC+GGG | - | chr6_4:32335714-32335733 | None:intergenic | 40.0% | |
CCCAAAGAGAAGAAACTTTC+CGG | - | chr6_4:32335715-32335734 | None:intergenic | 40.0% | |
CCGGAAAGTTTCTTCTCTTT+GGG | + | chr6_4:32335712-32335731 | Msa0985620:CDS | 40.0% | |
CGGAAAGTTTCTTCTCTTTG+GGG | + | chr6_4:32335713-32335732 | Msa0985620:CDS | 40.0% | |
ATCTGAGTTCCTCTATCCGA+TGG | + | chr6_4:32326713-32326732 | Msa0985620:exon | 45.0% | |
TCTGAGTTCCTCTATCCGAT+GGG | + | chr6_4:32326714-32326733 | Msa0985620:exon | 45.0% | |
ACAAGCCATCTGTAAAAGGC+CGG | - | chr6_4:32326744-32326763 | None:intergenic | 45.0% | |
CTCCACAAGCCATCTGTAAA+AGG | - | chr6_4:32326748-32326767 | None:intergenic | 45.0% | |
CCGCATCAATGATAACCATC+GGG | - | chr6_4:32326776-32326795 | None:intergenic | 45.0% | |
CCCGATGGTTATCATTGATG+CGG | + | chr6_4:32326773-32326792 | Msa0985620:CDS | 45.0% | |
AACCTCTACCTCGACATGAA+TGG | + | chr6_4:32326885-32326904 | Msa0985620:CDS | 45.0% | |
TACCATTCATGTCGAGGTAG+AGG | - | chr6_4:32326890-32326909 | None:intergenic | 45.0% | |
AACACCTCCTCAAAAGAGGT+CGG | - | chr6_4:32327773-32327792 | None:intergenic | 45.0% | |
CTCAAACACCTCCTCAAAAG+AGG | - | chr6_4:32327777-32327796 | None:intergenic | 45.0% | |
GCCTAGGAAGCTTCTCTTTA+TGG | + | chr6_4:32327838-32327857 | Msa0985620:CDS | 45.0% | |
GCCATAAAGAGAAGCTTCCT+AGG | - | chr6_4:32327842-32327861 | None:intergenic | 45.0% | |
!! | TATAGATGGTGTTGCGCCAA+GGG | + | chr6_4:32327958-32327977 | Msa0985620:intron | 45.0% |
!!! | TGCTGGTTCATTTTAGCCCT+TGG | - | chr6_4:32327977-32327996 | None:intergenic | 45.0% |
GGGCTAAAATGAACCAGCAA+CGG | + | chr6_4:32327978-32327997 | Msa0985620:CDS | 45.0% | |
AAATGAACCAGCAACGGTCA+AGG | + | chr6_4:32327984-32328003 | Msa0985620:CDS | 45.0% | |
ATCAGACCAATGTGCAGCAT+TGG | - | chr6_4:32328139-32328158 | None:intergenic | 45.0% | |
GGTTACGAGAGGAATTTGAG+AGG | + | chr6_4:32328581-32328600 | Msa0985620:CDS | 45.0% | |
CACACCTGGAACTGAATTCA+TGG | + | chr6_4:32328660-32328679 | Msa0985620:CDS | 45.0% | |
GGTTGAACAATGATCCTGGT+TGG | + | chr6_4:32328722-32328741 | Msa0985620:CDS | 45.0% | |
ATGCAAATGTTCCCGGTGAA+GGG | + | chr6_4:32328865-32328884 | Msa0985620:CDS | 45.0% | |
AATCTTATGCTCCCCTTCAC+CGG | - | chr6_4:32328880-32328899 | None:intergenic | 45.0% | |
TACAGGCAATGTCGTGTACT+CGG | - | chr6_4:32328945-32328964 | None:intergenic | 45.0% | |
AGTACACGACATTGCCTGTA+TGG | + | chr6_4:32328945-32328964 | Msa0985620:CDS | 45.0% | |
ACGACATTGCCTGTATGGTT+TGG | + | chr6_4:32328950-32328969 | Msa0985620:CDS | 45.0% | |
CACAAGCATTTGTCTTGACC+AGG | - | chr6_4:32329376-32329395 | None:intergenic | 45.0% | |
GGTCAAGACAAATGCTTGTG+TGG | + | chr6_4:32329376-32329395 | Msa0985620:CDS | 45.0% | |
GTGTGGTCAAATGGGTCATA+TGG | + | chr6_4:32329393-32329412 | Msa0985620:CDS | 45.0% | |
GGAAAGGCTAAAAGGAAGTC+AGG | + | chr6_4:32329430-32329449 | Msa0985620:CDS | 45.0% | |
CTAAAAAGCCTTTCCAGGTC+AGG | + | chr6_4:32329485-32329504 | Msa0985620:intron | 45.0% | |
ACCTCATGAATCTCTAGCGT+AGG | - | chr6_4:32329739-32329758 | None:intergenic | 45.0% | |
CGCTAGAGATTCATGAGGTA+AGG | + | chr6_4:32329740-32329759 | Msa0985620:intron | 45.0% | |
! | GCTGATGGGAGTATACAAGA+AGG | + | chr6_4:32329977-32329996 | Msa0985620:CDS | 45.0% |
AAGGAACTTAAGGGAATGGG+TGG | + | chr6_4:32329996-32330015 | Msa0985620:CDS | 45.0% | |
TGCTCGACTCTGCTCAAATT+TGG | - | chr6_4:32330156-32330175 | None:intergenic | 45.0% | |
! | GTTGCATTCGAGCTCGTTTT+TGG | - | chr6_4:32330218-32330237 | None:intergenic | 45.0% |
AAAACGAGCTCGAATGCAAC+AGG | + | chr6_4:32330218-32330237 | Msa0985620:CDS | 45.0% | |
CAACGACCAAATCATACTGC+TGG | - | chr6_4:32330281-32330300 | None:intergenic | 45.0% | |
!! | CAGCAGTATGATTTGGTCGT+TGG | + | chr6_4:32330279-32330298 | Msa0985620:intron | 45.0% |
TGAACTGAAGGGAATGTGAG+CGG | + | chr6_4:32330668-32330687 | Msa0985620:intron | 45.0% | |
TATATAGCTCCAGCTAACGG+TGG | + | chr6_4:32330795-32330814 | Msa0985620:intron | 45.0% | |
CAAGCAAGAGGAGATACTGT+TGG | + | chr6_4:32330841-32330860 | Msa0985620:CDS | 45.0% | |
GAAACTGCAACTAGAGACTC+GGG | - | chr6_4:32330880-32330899 | None:intergenic | 45.0% | |
GGAAACTGCAACTAGAGACT+CGG | - | chr6_4:32330881-32330900 | None:intergenic | 45.0% | |
CTGAATCAAGACGAGAATCG+TGG | - | chr6_4:32330909-32330928 | None:intergenic | 45.0% | |
CCAGATTGTTGAAATGGTGC+AGG | - | chr6_4:32330940-32330959 | None:intergenic | 45.0% | |
CCTGCACCATTTCAACAATC+TGG | + | chr6_4:32330937-32330956 | Msa0985620:CDS | 45.0% | |
CAACTCAAAAGGTGGTCATG+AGG | + | chr6_4:32331347-32331366 | Msa0985620:CDS | 45.0% | |
AAAAGGTGGTCATGAGGACA+AGG | + | chr6_4:32331353-32331372 | Msa0985620:CDS | 45.0% | |
! | ATTTTCCCTGCAATATGGGC+TGG | + | chr6_4:32331587-32331606 | Msa0985620:intron | 45.0% |
! | TTTTCCCTGCAATATGGGCT+GGG | + | chr6_4:32331588-32331607 | Msa0985620:intron | 45.0% |
TTACTGAGTGACCGATATGG+GGG | + | chr6_4:32331723-32331742 | Msa0985620:intron | 45.0% | |
ATCAACCTCTTGGCCACATA+AGG | + | chr6_4:32331915-32331934 | Msa0985620:intron | 45.0% | |
TCAACCTCTTGGCCACATAA+GGG | + | chr6_4:32331916-32331935 | Msa0985620:intron | 45.0% | |
! | AGCTTTTCCCATCATGGGAA+TGG | - | chr6_4:32331948-32331967 | None:intergenic | 45.0% |
ACCTAGACCTTTCTCTGTCT+TGG | + | chr6_4:32332073-32332092 | Msa0985620:intron | 45.0% | |
CATATGGCCAAGACAGAGAA+AGG | - | chr6_4:32332083-32332102 | None:intergenic | 45.0% | |
CTACAAGCCTACACAATGAC+TGG | + | chr6_4:32332103-32332122 | Msa0985620:intron | 45.0% | |
TTAAATTGGGAGAACCAGGC+TGG | + | chr6_4:32332299-32332318 | Msa0985620:CDS | 45.0% | |
TAATACCTCTCTTTCCAGCC+TGG | - | chr6_4:32332316-32332335 | None:intergenic | 45.0% | |
CGTATAGCATCAAGTTCCTC+GGG | - | chr6_4:32332364-32332383 | None:intergenic | 45.0% | |
CCGTATAGCATCAAGTTCCT+CGG | - | chr6_4:32332365-32332384 | None:intergenic | 45.0% | |
CCGAGGAACTTGATGCTATA+CGG | + | chr6_4:32332362-32332381 | Msa0985620:CDS | 45.0% | |
AATACACCGAGGGTCTATGT+TGG | + | chr6_4:32332484-32332503 | Msa0985620:CDS | 45.0% | |
ATACACCGAGGGTCTATGTT+GGG | + | chr6_4:32332485-32332504 | Msa0985620:CDS | 45.0% | |
GTTTCTCATCATGGTGAGGA+AGG | - | chr6_4:32332647-32332666 | None:intergenic | 45.0% | |
! | CCTTTGATCAAAAGCGTGTC+CGG | + | chr6_4:32332871-32332890 | Msa0985620:intron | 45.0% |
! | GCAAAGGGGGCATAATGATA+AGG | - | chr6_4:32333357-32333376 | None:intergenic | 45.0% |
! | TTGGAGTTTTACCTGCTGCA+AGG | + | chr6_4:32333454-32333473 | Msa0985620:CDS | 45.0% |
! | TTGTGCGTCAGACTTTGAAG+TGG | + | chr6_4:32333728-32333747 | Msa0985620:intron | 45.0% |
TGAATGGCAAACGCAATGCT+TGG | + | chr6_4:32333754-32333773 | Msa0985620:CDS | 45.0% | |
TAAGAGCAGATGTAACGAGG+AGG | - | chr6_4:32333788-32333807 | None:intergenic | 45.0% | |
TGATGAAGTGCGTCTTCTTC+AGG | + | chr6_4:32333889-32333908 | Msa0985620:CDS | 45.0% | |
TGTACTAATGCACGCAGAGA+GGG | - | chr6_4:32334134-32334153 | None:intergenic | 45.0% | |
AACATCAGCACGTTCAGAGT+TGG | - | chr6_4:32334182-32334201 | None:intergenic | 45.0% | |
! | CTCTGAACGTGCTGATGTTA+AGG | + | chr6_4:32334183-32334202 | Msa0985620:CDS | 45.0% |
AATAGACCCCGTTGAAAGGT+TGG | + | chr6_4:32334210-32334229 | Msa0985620:intron | 45.0% | |
CGAACCAAGGACAAAGCAAA+AGG | + | chr6_4:32334371-32334390 | Msa0985620:intron | 45.0% | |
TTTAGGGATACATGCAGTGG+TGG | + | chr6_4:32334472-32334491 | Msa0985620:intron | 45.0% | |
! | ACATGCAGTGGTGGAATGAA+TGG | + | chr6_4:32334481-32334500 | Msa0985620:CDS | 45.0% |
ACAGGGTTCTCCACTACATA+AGG | - | chr6_4:32334515-32334534 | None:intergenic | 45.0% | |
TGTCTTCCATGCCTGCAATA+GGG | - | chr6_4:32334555-32334574 | None:intergenic | 45.0% | |
ATGTCTTCCATGCCTGCAAT+AGG | - | chr6_4:32334556-32334575 | None:intergenic | 45.0% | |
TTAGCTTCATGCCATGGAAC+AGG | - | chr6_4:32335077-32335096 | None:intergenic | 45.0% | |
GTTCCATGGCATGAAGCTAA+TGG | + | chr6_4:32335077-32335096 | Msa0985620:CDS | 45.0% | |
GGAGATACAACGAAAGTGGA+AGG | + | chr6_4:32335102-32335121 | Msa0985620:CDS | 45.0% | |
CTATTTCAGGAAAACCCGAC+CGG | + | chr6_4:32335241-32335260 | Msa0985620:intron | 45.0% | |
TATTTCAGGAAAACCCGACC+GGG | + | chr6_4:32335242-32335261 | Msa0985620:intron | 45.0% | |
TTTCATCTTCGACGAGGCTT+TGG | - | chr6_4:32335345-32335364 | None:intergenic | 45.0% | |
! | CGTGAACTGGAATAACGGAA+GGG | - | chr6_4:32335447-32335466 | None:intergenic | 45.0% |
! | ACGTGAACTGGAATAACGGA+AGG | - | chr6_4:32335448-32335467 | None:intergenic | 45.0% |
TTCACGTATCCCTTAGCCAA+AGG | + | chr6_4:32335461-32335480 | Msa0985620:CDS | 45.0% | |
! | ACGATTTGGGTGATGGTGTA+GGG | - | chr6_4:32335494-32335513 | None:intergenic | 45.0% |
! | CTTGTTTGAGATGCTGAGCA+TGG | - | chr6_4:32335544-32335563 | None:intergenic | 45.0% |
CAAATTGATGGGGCAATCGA+GGG | - | chr6_4:32335567-32335586 | None:intergenic | 45.0% | |
TCAAATTGATGGGGCAATCG+AGG | - | chr6_4:32335568-32335587 | None:intergenic | 45.0% | |
CCCCATCAATTTGAAAGCCA+AGG | + | chr6_4:32335574-32335593 | Msa0985620:CDS | 45.0% | |
! | GGAATCGGGTTTGATTTCCT+TGG | - | chr6_4:32335594-32335613 | None:intergenic | 45.0% |
AAACCCGATTCCGACATCAT+CGG | + | chr6_4:32335602-32335621 | Msa0985620:CDS | 45.0% | |
TTTGAGGATGCCGATGATGT+CGG | - | chr6_4:32335615-32335634 | None:intergenic | 45.0% | |
!!! | GGCTTAGGGTTTTGGACTTT+AGG | - | chr6_4:32335649-32335668 | None:intergenic | 45.0% |
CCCGGAAAGTTTCTTCTCTT+TGG | + | chr6_4:32335711-32335730 | Msa0985620:CDS | 45.0% | |
!! | TTATTTAATAATAATTAACA+TGG | - | chr6_4:32329249-32329268 | None:intergenic | 5.0% |
!!! | TTTTTTAAATTTTCTTTTAT+AGG | - | chr6_4:32331515-32331534 | None:intergenic | 5.0% |
GGCGCGAAACGTGAAATTGA+AGG | - | chr6_4:32326605-32326624 | None:intergenic | 50.0% | |
TAAAAGGCCGGAACTCCCAT+CGG | - | chr6_4:32326732-32326751 | None:intergenic | 50.0% | |
! | GAGTTCCGGCCTTTTACAGA+TGG | + | chr6_4:32326736-32326755 | Msa0985620:CDS | 50.0% |
! | GGCCTTTTACAGATGGCTTG+TGG | + | chr6_4:32326743-32326762 | Msa0985620:CDS | 50.0% |
GCTTGTGGAGAAATACCCGA+TGG | + | chr6_4:32326758-32326777 | Msa0985620:CDS | 50.0% | |
TGATGCGGTCGAAGAAGAAC+CGG | + | chr6_4:32326788-32326807 | Msa0985620:CDS | 50.0% | |
CCTTCGATTTCGATGACGAC+CGG | - | chr6_4:32326810-32326829 | None:intergenic | 50.0% | |
ACACCTCCTCAAAAGAGGTC+GGG | - | chr6_4:32327772-32327791 | None:intergenic | 50.0% | |
TGTTTAACATGGTGCGGCCT+AGG | + | chr6_4:32327822-32327841 | Msa0985620:CDS | 50.0% | |
!! | GTATAGATGGTGTTGCGCCA+AGG | + | chr6_4:32327957-32327976 | Msa0985620:intron | 50.0% |
ACGAGAGGAATTTGAGAGGG+AGG | + | chr6_4:32328585-32328604 | Msa0985620:CDS | 50.0% | |
CGAGAGGAATTTGAGAGGGA+GGG | + | chr6_4:32328586-32328605 | Msa0985620:CDS | 50.0% | |
!! | GTTGCCGATTCCTCTTTAGG+AGG | - | chr6_4:32328622-32328641 | None:intergenic | 50.0% |
GCAGCCATGAATTCAGTTCC+AGG | - | chr6_4:32328667-32328686 | None:intergenic | 50.0% | |
CTGCAGTATGTGTGTCTCAG+TGG | + | chr6_4:32328793-32328812 | Msa0985620:intron | 50.0% | |
GATGCAAATGTTCCCGGTGA+AGG | + | chr6_4:32328864-32328883 | Msa0985620:CDS | 50.0% | |
TGCAAATGTTCCCGGTGAAG+GGG | + | chr6_4:32328866-32328885 | Msa0985620:CDS | 50.0% | |
ATCTTATGCTCCCCTTCACC+GGG | - | chr6_4:32328879-32328898 | None:intergenic | 50.0% | |
CATATGGCTGCAGACTGTGA+AGG | + | chr6_4:32329409-32329428 | Msa0985620:CDS | 50.0% | |
TCTCAAACCCTGACCTGGAA+AGG | - | chr6_4:32329496-32329515 | None:intergenic | 50.0% | |
! | TTGGACTCTGAGGGAATGTC+TGG | + | chr6_4:32329603-32329622 | Msa0985620:CDS | 50.0% |
ATCTCTAGCGTAGGCATGTG+TGG | - | chr6_4:32329730-32329749 | None:intergenic | 50.0% | |
GCCTACGCTAGAGATTCATG+AGG | + | chr6_4:32329735-32329754 | Msa0985620:CDS | 50.0% | |
! | GCACCCATTTTCCAGCACAA+AGG | - | chr6_4:32330601-32330620 | None:intergenic | 50.0% |
!! | AGAGACTCGGGTTGAACTTG+AGG | - | chr6_4:32330868-32330887 | None:intergenic | 50.0% |
TGTTGAAATGGTGCAGGCGT+TGG | - | chr6_4:32330934-32330953 | None:intergenic | 50.0% | |
GTGGGCCCAGATTGTTGAAA+TGG | - | chr6_4:32330946-32330965 | None:intergenic | 50.0% | |
GGGCCCACCTCAGTTAAAAA+AGG | + | chr6_4:32330958-32330977 | Msa0985620:CDS | 50.0% | |
TCAACCCAGCCCATATTGCA+GGG | - | chr6_4:32331595-32331614 | None:intergenic | 50.0% | |
ATCAACCCAGCCCATATTGC+AGG | - | chr6_4:32331596-32331615 | None:intergenic | 50.0% | |
CAACCTCTTGGCCACATAAG+GGG | + | chr6_4:32331917-32331936 | Msa0985620:intron | 50.0% | |
TTCCCATCATGGGAATGGCT+AGG | - | chr6_4:32331943-32331962 | None:intergenic | 50.0% | |
CAGAGGGGGGAAGTTTGATA+TGG | - | chr6_4:32331973-32331992 | None:intergenic | 50.0% | |
TTCCCCCCTCTGTGTGTATT+GGG | + | chr6_4:32331981-32332000 | Msa0985620:intron | 50.0% | |
ACACCCAATACACACAGAGG+GGG | - | chr6_4:32331987-32332006 | None:intergenic | 50.0% | |
CACACCCAATACACACAGAG+GGG | - | chr6_4:32331988-32332007 | None:intergenic | 50.0% | |
CCACACCCAATACACACAGA+GGG | - | chr6_4:32331989-32332008 | None:intergenic | 50.0% | |
CCTCTGTGTGTATTGGGTGT+GGG | + | chr6_4:32331987-32332006 | Msa0985620:intron | 50.0% | |
GCCAAGACAGAGAAAGGTCT+AGG | - | chr6_4:32332077-32332096 | None:intergenic | 50.0% | |
GGCAATCCCAGTCATTGTGT+AGG | - | chr6_4:32332113-32332132 | None:intergenic | 50.0% | |
! | ATTTTCTGCTCAGACTCCCG+AGG | + | chr6_4:32332345-32332364 | Msa0985620:CDS | 50.0% |
CATCACCCAACATAGACCCT+CGG | - | chr6_4:32332493-32332512 | None:intergenic | 50.0% | |
TCTCATCATGGTGAGGAAGG+TGG | - | chr6_4:32332644-32332663 | None:intergenic | 50.0% | |
CGCAGTTTCTCATCATGGTG+AGG | - | chr6_4:32332651-32332670 | None:intergenic | 50.0% | |
! | CCGGACACGCTTTTGATCAA+AGG | - | chr6_4:32332874-32332893 | None:intergenic | 50.0% |
CTTCAGATCAGACGCAAAGG+GGG | - | chr6_4:32333370-32333389 | None:intergenic | 50.0% | |
CCTTCAGATCAGACGCAAAG+GGG | - | chr6_4:32333371-32333390 | None:intergenic | 50.0% | |
CCCTTCAGATCAGACGCAAA+GGG | - | chr6_4:32333372-32333391 | None:intergenic | 50.0% | |
CCCTTTGCGTCTGATCTGAA+GGG | + | chr6_4:32333369-32333388 | Msa0985620:CDS | 50.0% | |
TTTCCTATACGGCTCAGGCA+GGG | - | chr6_4:32333577-32333596 | None:intergenic | 50.0% | |
!!! | GCATTTCGTCGCTTTTCCTC+TGG | - | chr6_4:32334073-32334092 | None:intergenic | 50.0% |
GTACTAATGCACGCAGAGAG+GGG | - | chr6_4:32334133-32334152 | None:intergenic | 50.0% | |
GTGTACTAATGCACGCAGAG+AGG | - | chr6_4:32334135-32334154 | None:intergenic | 50.0% | |
TGTGCACCAACCTTTCAACG+GGG | - | chr6_4:32334219-32334238 | None:intergenic | 50.0% | |
CTGTGCACCAACCTTTCAAC+GGG | - | chr6_4:32334220-32334239 | None:intergenic | 50.0% | |
GCTGTGCACCAACCTTTCAA+CGG | - | chr6_4:32334221-32334240 | None:intergenic | 50.0% | |
GCAATAGGGGACCTGAAGAT+GGG | - | chr6_4:32334541-32334560 | None:intergenic | 50.0% | |
TGCAATAGGGGACCTGAAGA+TGG | - | chr6_4:32334542-32334561 | None:intergenic | 50.0% | |
ATCTTCAGGTCCCCTATTGC+AGG | + | chr6_4:32334541-32334560 | Msa0985620:CDS | 50.0% | |
GTCTTCCATGCCTGCAATAG+GGG | - | chr6_4:32334554-32334573 | None:intergenic | 50.0% | |
TGCAGGCATGGAAGACATCA+TGG | + | chr6_4:32334558-32334577 | Msa0985620:CDS | 50.0% | |
CATATAGCTCGACCACCACA+TGG | + | chr6_4:32334800-32334819 | Msa0985620:CDS | 50.0% | |
CTCTCCCTGGTTTCTCTTCT+CGG | + | chr6_4:32334887-32334906 | Msa0985620:intron | 50.0% | |
TCTCCCTGGTTTCTCTTCTC+GGG | + | chr6_4:32334888-32334907 | Msa0985620:intron | 50.0% | |
GAACCCGAGAAGAGAAACCA+GGG | - | chr6_4:32334894-32334913 | None:intergenic | 50.0% | |
TGAACCCGAGAAGAGAAACC+AGG | - | chr6_4:32334895-32334914 | None:intergenic | 50.0% | |
TCATGCCATGGAACAGGTTC+AGG | - | chr6_4:32335071-32335090 | None:intergenic | 50.0% | |
! | CTCCCATTAGCTTCATGCCA+TGG | - | chr6_4:32335083-32335102 | None:intergenic | 50.0% |
CATGGCATGAAGCTAATGGG+AGG | + | chr6_4:32335081-32335100 | Msa0985620:CDS | 50.0% | |
GGGAGGAGATACAACGAAAG+TGG | + | chr6_4:32335098-32335117 | Msa0985620:CDS | 50.0% | |
!! | GGGGCTCGGTTTTCTATTTC+AGG | + | chr6_4:32335228-32335247 | Msa0985620:intron | 50.0% |
TGTGCGTTTCATCTTCGACG+AGG | - | chr6_4:32335351-32335370 | None:intergenic | 50.0% | |
! | GAATAACGGAAGGGCTTTGG+CGG | - | chr6_4:32335438-32335457 | None:intergenic | 50.0% |
! | CTGGAATAACGGAAGGGCTT+TGG | - | chr6_4:32335441-32335460 | None:intergenic | 50.0% |
TGGCTAAGGGATACGTGAAC+TGG | - | chr6_4:32335460-32335479 | None:intergenic | 50.0% | |
! | GGCTTTGTGCCTTTGGCTAA+GGG | - | chr6_4:32335473-32335492 | None:intergenic | 50.0% |
! | GACGATTTGGGTGATGGTGT+AGG | - | chr6_4:32335495-32335514 | None:intergenic | 50.0% |
! | GCTATCGACGATTTGGGTGA+TGG | - | chr6_4:32335501-32335520 | None:intergenic | 50.0% |
ATGCCGATGATGTCGGAATC+GGG | - | chr6_4:32335608-32335627 | None:intergenic | 50.0% | |
GATGCCGATGATGTCGGAAT+CGG | - | chr6_4:32335609-32335628 | None:intergenic | 50.0% | |
!! | TGGGAGTTGGCTTAGGGTTT+TGG | - | chr6_4:32335657-32335676 | None:intergenic | 50.0% |
AAACTTTCCGGGTCGTAGTG+GGG | - | chr6_4:32335703-32335722 | None:intergenic | 50.0% | |
GAAACTTTCCGGGTCGTAGT+GGG | - | chr6_4:32335704-32335723 | None:intergenic | 50.0% | |
AGAAACTTTCCGGGTCGTAG+TGG | - | chr6_4:32335705-32335724 | None:intergenic | 50.0% | |
CCTCTATCCGATGGGAGTTC+CGG | + | chr6_4:32326722-32326741 | Msa0985620:exon | 55.0% | |
CCGGTCGTCATCGAAATCGA+AGG | + | chr6_4:32326807-32326826 | Msa0985620:CDS | 55.0% | |
ACCTCCTCAAAAGAGGTCGG+GGG | - | chr6_4:32327770-32327789 | None:intergenic | 55.0% | |
CACCTCCTCAAAAGAGGTCG+GGG | - | chr6_4:32327771-32327790 | None:intergenic | 55.0% | |
TGAACCAGCAACGGTCAAGG+CGG | + | chr6_4:32327987-32328006 | Msa0985620:CDS | 55.0% | |
TAAACCGCCTTGACCGTTGC+TGG | - | chr6_4:32327994-32328013 | None:intergenic | 55.0% | |
GGCTGCAGACTGTGAAGGAA+AGG | + | chr6_4:32329414-32329433 | Msa0985620:CDS | 55.0% | |
CTAGCGTAGGCATGTGTGGT+AGG | - | chr6_4:32329726-32329745 | None:intergenic | 55.0% | |
CGTCAGCAGTCACAAGCAAG+AGG | + | chr6_4:32330829-32330848 | Msa0985620:CDS | 55.0% | |
GAATGGCTAGGCCCCTTATG+TGG | - | chr6_4:32331931-32331950 | None:intergenic | 55.0% | |
GGCCTAGCCATTCCCATGAT+GGG | + | chr6_4:32331938-32331957 | Msa0985620:intron | 55.0% | |
CTTCCCCCCTCTGTGTGTAT+TGG | + | chr6_4:32331980-32331999 | Msa0985620:intron | 55.0% | |
CACCCAATACACACAGAGGG+GGG | - | chr6_4:32331986-32332005 | None:intergenic | 55.0% | |
CCCTCTGTGTGTATTGGGTG+TGG | + | chr6_4:32331986-32332005 | Msa0985620:intron | 55.0% | |
CCCACACCCAATACACACAG+AGG | - | chr6_4:32331990-32332009 | None:intergenic | 55.0% | |
GAGAACCAGGCTGGAAAGAG+AGG | + | chr6_4:32332308-32332327 | Msa0985620:CDS | 55.0% | |
CCCCTTTGCGTCTGATCTGA+AGG | + | chr6_4:32333368-32333387 | Msa0985620:CDS | 55.0% | |
GCCCTTCAGATCAGACGCAA+AGG | - | chr6_4:32333373-32333392 | None:intergenic | 55.0% | |
GTTTCCTATACGGCTCAGGC+AGG | - | chr6_4:32333578-32333597 | None:intergenic | 55.0% | |
TGGCAAACGCAATGCTTGGC+AGG | + | chr6_4:32333758-32333777 | Msa0985620:CDS | 55.0% | |
AACCCTGTCCTCCCATCTTC+AGG | + | chr6_4:32334527-32334546 | Msa0985620:CDS | 55.0% | |
GACCTGAAGATGGGAGGACA+GGG | - | chr6_4:32334532-32334551 | None:intergenic | 55.0% | |
ATAGGGGACCTGAAGATGGG+AGG | - | chr6_4:32334538-32334557 | None:intergenic | 55.0% | |
GTGCTCTAACTTCCTCTCCC+TGG | + | chr6_4:32334874-32334893 | Msa0985620:intron | 55.0% | |
CGAGAAGAGAAACCAGGGAG+AGG | - | chr6_4:32334889-32334908 | None:intergenic | 55.0% | |
TCCAAGCTCCCGACCAGAAA+CGG | - | chr6_4:32335270-32335289 | None:intergenic | 55.0% | |
TTTGGCGGAGGATGACAACG+GGG | - | chr6_4:32335327-32335346 | None:intergenic | 55.0% | |
CTTTGGCGGAGGATGACAAC+GGG | - | chr6_4:32335328-32335347 | None:intergenic | 55.0% | |
GCTTTGGCGGAGGATGACAA+CGG | - | chr6_4:32335329-32335348 | None:intergenic | 55.0% | |
! | CATCTTCGACGAGGCTTTGG+CGG | - | chr6_4:32335342-32335361 | None:intergenic | 55.0% |
! | GGGCTTTGTGCCTTTGGCTA+AGG | - | chr6_4:32335474-32335493 | None:intergenic | 55.0% |
! | GGTGTAGGGCTTTGTGCCTT+TGG | - | chr6_4:32335480-32335499 | None:intergenic | 55.0% |
GAGATGCTGAGCATGGGCTT+TGG | - | chr6_4:32335537-32335556 | None:intergenic | 55.0% | |
! | GGGAGTTGGGAGTTGGCTTA+GGG | - | chr6_4:32335663-32335682 | None:intergenic | 55.0% |
! | AGGGAGTTGGGAGTTGGCTT+AGG | - | chr6_4:32335664-32335683 | None:intergenic | 55.0% |
AGTTGGAGGGAGTTGGGAGT+TGG | - | chr6_4:32335670-32335689 | None:intergenic | 55.0% | |
AACTTTCCGGGTCGTAGTGG+GGG | - | chr6_4:32335702-32335721 | None:intergenic | 55.0% | |
CAGATCGTCGACCCCGAAGA+AGG | - | chr6_4:32326698-32326717 | None:intergenic | 60.0% | |
CCGGAACTCCCATCGGATAG+AGG | - | chr6_4:32326725-32326744 | None:intergenic | 60.0% | |
TCCTCAAAAGAGGTCGGGGG+TGG | - | chr6_4:32327767-32327786 | None:intergenic | 60.0% | |
!! | ACCCCCGACCTCTTTTGAGG+AGG | + | chr6_4:32327766-32327785 | Msa0985620:CDS | 60.0% |
AGGCCCCTTATGTGGCCAAG+AGG | - | chr6_4:32331923-32331942 | None:intergenic | 60.0% | |
GGGCCTAGCCATTCCCATGA+TGG | + | chr6_4:32331937-32331956 | Msa0985620:intron | 60.0% | |
!! | GACATGGGTCGGTGTCGTGT+CGG | - | chr6_4:32332900-32332919 | None:intergenic | 60.0% |
GCGTCTGATCTGAAGGGCCT+TGG | + | chr6_4:32333375-32333394 | Msa0985620:CDS | 60.0% | |
ATGCCCTGCCTGAGCCGTAT+AGG | + | chr6_4:32333571-32333590 | Msa0985620:CDS | 60.0% | |
GGACCTGAAGATGGGAGGAC+AGG | - | chr6_4:32334533-32334552 | None:intergenic | 60.0% | |
CAGGTCCCCTATTGCAGGCA+TGG | + | chr6_4:32334546-32334565 | Msa0985620:CDS | 60.0% | |
ACCAGAAACGGATCCCGGTC+GGG | - | chr6_4:32335258-32335277 | None:intergenic | 60.0% | |
GACCAGAAACGGATCCCGGT+CGG | - | chr6_4:32335259-32335278 | None:intergenic | 60.0% | |
!! | GACCGGGATCCGTTTCTGGT+CGG | + | chr6_4:32335258-32335277 | Msa0985620:CDS | 60.0% |
!! | ACCGGGATCCGTTTCTGGTC+GGG | + | chr6_4:32335259-32335278 | Msa0985620:CDS | 60.0% |
TCCCGACCAGAAACGGATCC+CGG | - | chr6_4:32335263-32335282 | None:intergenic | 60.0% | |
!! | TCCGTTTCTGGTCGGGAGCT+TGG | + | chr6_4:32335266-32335285 | Msa0985620:CDS | 60.0% |
TTCTGGTCGGGAGCTTGGAG+AGG | + | chr6_4:32335271-32335290 | Msa0985620:CDS | 60.0% | |
TTTGGCGGAGGATGACGACG+AGG | - | chr6_4:32335423-32335442 | None:intergenic | 60.0% | |
! | TAACGGAAGGGCTTTGGCGG+AGG | - | chr6_4:32335435-32335454 | None:intergenic | 60.0% |
GGAGGGAGTTGGAGGGAGTT+GGG | - | chr6_4:32335676-32335695 | None:intergenic | 60.0% | |
! | ACTTTCCGGGTCGTAGTGGG+GGG | - | chr6_4:32335701-32335720 | None:intergenic | 60.0% |
! | GCCACCCCCGACCTCTTTTG+AGG | + | chr6_4:32327763-32327782 | Msa0985620:intron | 65.0% |
!! | GTCGGTGTCGTGTCGGACAC+CGG | - | chr6_4:32332893-32332912 | None:intergenic | 65.0% |
ACCCGACCGGGATCCGTTTC+TGG | + | chr6_4:32335254-32335273 | Msa0985620:CDS | 65.0% | |
! | CTTCGACGAGGCTTTGGCGG+AGG | - | chr6_4:32335339-32335358 | None:intergenic | 65.0% |
GGGAGGGAGTTGGAGGGAGT+TGG | - | chr6_4:32335677-32335696 | None:intergenic | 65.0% | |
GGGGGAGGGAGGGAGTTGGA+GGG | - | chr6_4:32335683-32335702 | None:intergenic | 70.0% | |
AGTGGGGGGAGGGAGGGAGT+TGG | - | chr6_4:32335687-32335706 | None:intergenic | 70.0% | |
! | GGTCGTAGTGGGGGGAGGGA+GGG | - | chr6_4:32335693-32335712 | None:intergenic | 70.0% |
TCCCTCCCCCCACTACGACC+CGG | + | chr6_4:32335693-32335712 | Msa0985620:CDS | 70.0% | |
! | TCCGGGTCGTAGTGGGGGGA+GGG | - | chr6_4:32335697-32335716 | None:intergenic | 70.0% |
! | TTCCGGGTCGTAGTGGGGGG+AGG | - | chr6_4:32335698-32335717 | None:intergenic | 70.0% |
GGGGGGAGGGAGGGAGTTGG+AGG | - | chr6_4:32335684-32335703 | None:intergenic | 75.0% | |
! | GGGTCGTAGTGGGGGGAGGG+AGG | - | chr6_4:32335694-32335713 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 32326590 | 32335739 | 32326590 | ID=Msa0985620;Name=Msa0985620 |
chr6_4 | mRNA | 32326590 | 32335739 | 32326590 | ID=Msa0985620-mRNA-1;Parent=Msa0985620;Name=Msa0985620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=142|0.82|0.83|0.95|1|1|24|0|1028 |
chr6_4 | exon | 32326590 | 32326941 | 32326590 | ID=Msa0985620-mRNA-1:exon:8601;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32327764 | 32327866 | 32327764 | ID=Msa0985620-mRNA-1:exon:8602;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32327963 | 32328039 | 32327963 | ID=Msa0985620-mRNA-1:exon:8603;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32328565 | 32328756 | 32328565 | ID=Msa0985620-mRNA-1:exon:8604;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32328852 | 32328971 | 32328852 | ID=Msa0985620-mRNA-1:exon:8605;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32329105 | 32329167 | 32329105 | ID=Msa0985620-mRNA-1:exon:8606;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32329361 | 32329501 | 32329361 | ID=Msa0985620-mRNA-1:exon:8607;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32329592 | 32329756 | 32329592 | ID=Msa0985620-mRNA-1:exon:8608;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32329954 | 32330040 | 32329954 | ID=Msa0985620-mRNA-1:exon:8609;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32330153 | 32330239 | 32330153 | ID=Msa0985620-mRNA-1:exon:8610;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32330336 | 32330389 | 32330336 | ID=Msa0985620-mRNA-1:exon:8611;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32330802 | 32331083 | 32330802 | ID=Msa0985620-mRNA-1:exon:8612;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32331279 | 32331374 | 32331279 | ID=Msa0985620-mRNA-1:exon:8613;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32332298 | 32332393 | 32332298 | ID=Msa0985620-mRNA-1:exon:8614;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32332477 | 32332547 | 32332477 | ID=Msa0985620-mRNA-1:exon:8615;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32333347 | 32333475 | 32333347 | ID=Msa0985620-mRNA-1:exon:8616;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32333566 | 32333642 | 32333566 | ID=Msa0985620-mRNA-1:exon:8617;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32333739 | 32333779 | 32333739 | ID=Msa0985620-mRNA-1:exon:8618;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32333866 | 32333940 | 32333866 | ID=Msa0985620-mRNA-1:exon:8619;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32334070 | 32334227 | 32334070 | ID=Msa0985620-mRNA-1:exon:8620;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32334477 | 32334593 | 32334477 | ID=Msa0985620-mRNA-1:exon:8621;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32334766 | 32334841 | 32334766 | ID=Msa0985620-mRNA-1:exon:8622;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32335044 | 32335123 | 32335044 | ID=Msa0985620-mRNA-1:exon:8623;Parent=Msa0985620-mRNA-1 |
chr6_4 | exon | 32335250 | 32335739 | 32335250 | ID=Msa0985620-mRNA-1:exon:8624;Parent=Msa0985620-mRNA-1 |
chr6_4 | five_prime_UTR | 32326590 | 32326731 | 32326590 | ID=Msa0985620-mRNA-1:five_prime_utr;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32326732 | 32326941 | 32326732 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32327764 | 32327866 | 32327764 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32327963 | 32328039 | 32327963 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32328565 | 32328756 | 32328565 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32328852 | 32328971 | 32328852 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32329105 | 32329167 | 32329105 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32329361 | 32329501 | 32329361 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32329592 | 32329756 | 32329592 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32329954 | 32330040 | 32329954 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32330153 | 32330239 | 32330153 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32330336 | 32330389 | 32330336 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32330802 | 32331083 | 32330802 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32331279 | 32331374 | 32331279 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32332298 | 32332393 | 32332298 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32332477 | 32332547 | 32332477 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32333347 | 32333475 | 32333347 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32333566 | 32333642 | 32333566 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32333739 | 32333779 | 32333739 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32333866 | 32333940 | 32333866 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32334070 | 32334227 | 32334070 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32334477 | 32334593 | 32334477 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32334766 | 32334841 | 32334766 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32335044 | 32335123 | 32335044 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
chr6_4 | CDS | 32335250 | 32335739 | 32335250 | ID=Msa0985620-mRNA-1:cds;Parent=Msa0985620-mRNA-1 |
Gene Sequence |
Protein sequence |