Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996870 | XP_003620160.1 | 93.406 | 1107 | 68 | 3 | 1 | 1102 | 1 | 1107 | 0.0 | 2048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996870 | G7KKC4 | 93.406 | 1107 | 68 | 3 | 1 | 1102 | 1 | 1107 | 0.0 | 2048 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0410650 | Msa0996870 | 0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0996870 | Msa1085200 | 0.807588 | 4.698018e-50 | -8.615850e-47 |
| Msa0507680 | Msa0996870 | 0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0896770 | Msa0996870 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996870 | MtrunA17_Chr6g0481871 | 93.406 | 1107 | 68 | 3 | 1 | 1102 | 1 | 1107 | 0.0 | 2048 |
| Msa0996870 | MtrunA17_Chr6g0483721 | 34.641 | 153 | 56 | 7 | 968 | 1102 | 273 | 399 | 2.08e-11 | 67.4 |
| Msa0996870 | MtrunA17_Chr2g0324081 | 28.906 | 256 | 123 | 10 | 811 | 1036 | 42 | 268 | 8.50e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996870 | AT1G17830.1 | 24.080 | 299 | 166 | 12 | 779 | 1039 | 20 | 295 | 4.85e-11 | 66.2 |
Find 223 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACACAGTCCTGTTAAAAT+TGG | 0.179244 | 6_4:+75616371 | None:intergenic |
| TGAGAAAGAGAATCTGATTT+TGG | 0.200620 | 6_4:+75615880 | None:intergenic |
| CAAATCCAGTCGAAAACTTA+TGG | 0.221911 | 6_4:-75614586 | Msa0996870:CDS |
| TCGAAAATCAAAAGGTAAAA+TGG | 0.256604 | 6_4:-75616439 | Msa0996870:CDS |
| AAGGATCCTGCAACTATTCT+AGG | 0.258238 | 6_4:-75616401 | Msa0996870:CDS |
| CTGCTTTGTGTTGTGTTGTT+TGG | 0.262112 | 6_4:+75620910 | None:intergenic |
| TCTGGAGTCACTTCAAATTC+AGG | 0.265531 | 6_4:-75616855 | Msa0996870:CDS |
| TTTCCATTCACTTGGGCATT+TGG | 0.274165 | 6_4:-75614293 | Msa0996870:CDS |
| AAAATTATTTGTATCTAGTT+TGG | 0.276163 | 6_4:+75613456 | None:intergenic |
| CTAGTTGGTTCATCAGAATA+TGG | 0.291826 | 6_4:+75615934 | None:intergenic |
| AATTAGGATCAAAGTGTTAT+TGG | 0.297864 | 6_4:-75613403 | Msa0996870:three_prime_UTR |
| TGAGATACCTGAAGTATCTT+TGG | 0.299596 | 6_4:-75615482 | Msa0996870:CDS |
| TTCCTTGGTAGAAAGGAATA+AGG | 0.304219 | 6_4:-75613274 | Msa0996870:three_prime_UTR |
| TAATGATATACAAGACTCTT+TGG | 0.305978 | 6_4:-75616961 | Msa0996870:CDS |
| GTTGGCGCGAATGTTGTTTC+AGG | 0.309338 | 6_4:-75616498 | Msa0996870:CDS |
| TAGAATGTCACATTTCAATT+AGG | 0.314170 | 6_4:-75613419 | Msa0996870:three_prime_UTR |
| ATCAATCAATCTCAGAATTC+AGG | 0.323404 | 6_4:-75620873 | Msa0996870:five_prime_UTR |
| CTGCAGAGATTTATCTTCCT+TGG | 0.328826 | 6_4:+75617340 | None:intergenic |
| TCGTTCAACAAGGCAAGTTC+TGG | 0.332300 | 6_4:-75616873 | Msa0996870:CDS |
| CCATCTGGTATACGGTAAAT+AGG | 0.336072 | 6_4:+75614340 | None:intergenic |
| AGATTCTCTTTCTCAAAATC+AGG | 0.341574 | 6_4:-75615872 | Msa0996870:CDS |
| GATGTCTGTTTGTGCAGATT+TGG | 0.352877 | 6_4:+75613557 | None:intergenic |
| CCTCCTGTTCTCAGGAGAAT+AGG | 0.352888 | 6_4:-75614819 | Msa0996870:CDS |
| GAAATTGTGTTACTTATTGT+TGG | 0.353153 | 6_4:-75614849 | Msa0996870:CDS |
| GAGATACCTGAAGTATCTTT+GGG | 0.355069 | 6_4:-75615481 | Msa0996870:CDS |
| AGCTTCTGGCAGCATAAGTA+TGG | 0.358427 | 6_4:-75617660 | Msa0996870:CDS |
| GCTCTACAGCCCTGTGGAAA+TGG | 0.358998 | 6_4:-75616017 | Msa0996870:CDS |
| TTCGGTCTGTTAACAGTTGT+TGG | 0.359048 | 6_4:+75617614 | None:intergenic |
| TATTAGTAGAATTATGAATA+TGG | 0.361620 | 6_4:-75613227 | Msa0996870:three_prime_UTR |
| GAAAGTTGCCATCTGGTATA+CGG | 0.368084 | 6_4:+75614332 | None:intergenic |
| TCAATTCAGTTCCATCCCTT+TGG | 0.368920 | 6_4:-75620836 | Msa0996870:five_prime_UTR |
| TTATGGGGACGCAACTAAAC+TGG | 0.368924 | 6_4:-75614569 | Msa0996870:CDS |
| CTTTGGGGTGCTTGTGGGAG+TGG | 0.371406 | 6_4:-75615465 | Msa0996870:CDS |
| TGAAGAAACAGCATCTCTTA+TGG | 0.383119 | 6_4:-75613605 | Msa0996870:CDS |
| GTCTTAACCCTCCTGTTCTC+AGG | 0.391133 | 6_4:-75614827 | Msa0996870:CDS |
| TCTACTGACTCAACCTGTTC+TGG | 0.391227 | 6_4:-75615181 | Msa0996870:intron |
| TGATAAAGAAGGGACAAAAT+AGG | 0.392470 | 6_4:+75615348 | None:intergenic |
| TTCATCTTCTCACAGGATAC+AGG | 0.397839 | 6_4:-75614629 | Msa0996870:intron |
| TTGCTGATTTGTCGTTGATT+TGG | 0.398707 | 6_4:+75618767 | None:intergenic |
| CTCCTGTTCTCAGGAGAATA+GGG | 0.400228 | 6_4:-75614818 | Msa0996870:CDS |
| GAACTTCGTACCGAGGAATA+TGG | 0.403444 | 6_4:-75617239 | Msa0996870:CDS |
| TATGAAGATCCGAAGACATT+AGG | 0.405203 | 6_4:-75615397 | Msa0996870:CDS |
| AAATCCAGTCGAAAACTTAT+GGG | 0.405999 | 6_4:-75614585 | Msa0996870:CDS |
| AAATTCTGATTCGCCGACTC+TGG | 0.411679 | 6_4:-75614257 | Msa0996870:CDS |
| CCTGTGCATTGTAACTTTGA+AGG | 0.413758 | 6_4:+75614206 | None:intergenic |
| TGTGTAGTTTCTCCAGCTGT+AGG | 0.414412 | 6_4:-75614229 | Msa0996870:CDS |
| ACCCTTCCTAGAATAGTTGC+AGG | 0.416005 | 6_4:+75616395 | None:intergenic |
| CTTGGTCAAGGCTTAACAAC+AGG | 0.416145 | 6_4:-75616819 | Msa0996870:CDS |
| TCAGACCAATGGAGTTGAAC+AGG | 0.416148 | 6_4:-75616259 | Msa0996870:CDS |
| ATACTTAATTGTCGAATTTG+AGG | 0.417307 | 6_4:-75613171 | Msa0996870:three_prime_UTR |
| TGTTTCCTGTTCAACTCCAT+TGG | 0.420147 | 6_4:+75616254 | None:intergenic |
| AGGATACAGGAGCTGGTTAG+AGG | 0.423243 | 6_4:-75614616 | Msa0996870:CDS |
| ACTGGAGTCTATAAGCTTGC+GGG | 0.424424 | 6_4:-75614551 | Msa0996870:CDS |
| ATCCACATCATTGCTGCTGC+AGG | 0.432183 | 6_4:+75617193 | None:intergenic |
| ATGATCATTTACCAAGATCT+AGG | 0.433366 | 6_4:+75614520 | None:intergenic |
| TGTTCGCACATCGACTTTCA+CGG | 0.433471 | 6_4:+75615305 | None:intergenic |
| TTTCTGACTTTCCATTCACT+TGG | 0.433678 | 6_4:-75614301 | Msa0996870:CDS |
| TGACAACTTTCTGAATTGTA+AGG | 0.434616 | 6_4:-75615278 | Msa0996870:CDS |
| CCCTTACATTGATCAATCTT+CGG | 0.434983 | 6_4:+75617596 | None:intergenic |
| ATGGATGTAGTTCTTGTATC+TGG | 0.441318 | 6_4:+75615841 | None:intergenic |
| GCTCAAAACTAAGGAATGTA+AGG | 0.443006 | 6_4:+75617741 | None:intergenic |
| GGGATCTTCATCCTAGATCT+TGG | 0.443408 | 6_4:-75614531 | Msa0996870:intron |
| TCGGGTGATCGACAAATAAC+AGG | 0.446638 | 6_4:+75615565 | None:intergenic |
| GGTGAAACAACCAAGTGAAT+CGG | 0.450041 | 6_4:+75615546 | None:intergenic |
| AAGTATCTTTGGGGTGCTTG+TGG | 0.451433 | 6_4:-75615471 | Msa0996870:CDS |
| TGACCAACTTGATTATCTAA+AGG | 0.451558 | 6_4:+75616093 | None:intergenic |
| TTTCCTGCTTCTGAAACTGT+TGG | 0.451948 | 6_4:+75618795 | None:intergenic |
| ACACAACAAAGTTACAACTT+TGG | 0.453572 | 6_4:-75618745 | Msa0996870:CDS |
| GCAATTATCAGACGAAATAC+CGG | 0.456287 | 6_4:+75617373 | None:intergenic |
| ACCGAAGATTGATCAATGTA+AGG | 0.457412 | 6_4:-75617597 | Msa0996870:CDS |
| AAGTTCTGAATCACCAGAAC+AGG | 0.458781 | 6_4:+75615168 | None:intergenic |
| TCCCTTTGGAAATTCTCTCA+TGG | 0.458854 | 6_4:-75620822 | Msa0996870:intron |
| GAACAGGTTGAGTCAGTAGA+TGG | 0.459240 | 6_4:+75615184 | None:intergenic |
| GGCCCTATTCTCCTGAGAAC+AGG | 0.462670 | 6_4:+75614816 | None:intergenic |
| GAATTCTTGTGCGGGAAGTT+CGG | 0.462837 | 6_4:-75617438 | Msa0996870:CDS |
| GGAAAATAATCAACAAGGAT+TGG | 0.465562 | 6_4:-75616292 | Msa0996870:CDS |
| AAACCAAATGCCCAAGTGAA+TGG | 0.469618 | 6_4:+75614290 | None:intergenic |
| TGAGTCAGTAGATGGATTAG+AGG | 0.469784 | 6_4:+75615192 | None:intergenic |
| AGTATCTTTGGGGTGCTTGT+GGG | 0.469939 | 6_4:-75615470 | Msa0996870:CDS |
| AAAATTATCGACCTGGAAAA+CGG | 0.471842 | 6_4:-75615910 | Msa0996870:CDS |
| TTCCATCAGGCTCAAAACTA+AGG | 0.473028 | 6_4:+75617732 | None:intergenic |
| TATACAAGACTCTTTGGTGT+TGG | 0.474517 | 6_4:-75616955 | Msa0996870:CDS |
| AAACTAGGTGAGGAGATTGC+AGG | 0.474634 | 6_4:-75615793 | Msa0996870:CDS |
| GTGTTGGATTCAGTTTCCAT+TGG | 0.475688 | 6_4:-75616939 | Msa0996870:CDS |
| TTCTTCAACTATCTCATCTC+AGG | 0.478607 | 6_4:-75616313 | Msa0996870:CDS |
| CAGTCATTCTGTCTGGCAAA+AGG | 0.479394 | 6_4:-75616646 | Msa0996870:CDS |
| AGTCCAACAGTTTCAGAAGC+AGG | 0.482670 | 6_4:-75618798 | Msa0996870:CDS |
| TTCTGACTTTCCATTCACTT+GGG | 0.484233 | 6_4:-75614300 | Msa0996870:CDS |
| CAACGATCAACTCTGATAGT+AGG | 0.486889 | 6_4:-75618585 | Msa0996870:intron |
| TGTGTTAAATGATAACTTGA+AGG | 0.488678 | 6_4:-75616355 | Msa0996870:CDS |
| GTGAAACAACCAAGTGAATC+GGG | 0.489453 | 6_4:+75615547 | None:intergenic |
| AGAATTCTCCAGGTTCCATC+AGG | 0.491680 | 6_4:+75617719 | None:intergenic |
| CCAACACCTCCTAATGTCTT+CGG | 0.492728 | 6_4:+75615388 | None:intergenic |
| CTCGGAGGGACCTGTCCTCT+AGG | 0.493960 | 6_4:+75617572 | None:intergenic |
| TTCACCCTCGATTTGACCAA+TGG | 0.496101 | 6_4:+75615822 | None:intergenic |
| CCACCTGATTTGCAGGTACT+CGG | 0.499785 | 6_4:-75614374 | Msa0996870:intron |
| CGTTGTGGCCCTCAGACAAA+AGG | 0.500962 | 6_4:-75618828 | Msa0996870:CDS |
| TAACTTTGAAGGCCTACAGC+TGG | 0.504747 | 6_4:+75614217 | None:intergenic |
| TTGAGGTGCTTATTAAACAT+AGG | 0.505993 | 6_4:-75613154 | Msa0996870:three_prime_UTR |
| TAATCAACAAGGATTGGTAA+TGG | 0.506749 | 6_4:-75616286 | Msa0996870:CDS |
| AAAGTCAGTCGAAAATCAAA+AGG | 0.506759 | 6_4:-75616447 | Msa0996870:CDS |
| CAACTGGTATCCATTTCCAC+AGG | 0.508136 | 6_4:+75616007 | None:intergenic |
| TATGAGAAACATGGGAGCTA+TGG | 0.508561 | 6_4:-75615442 | Msa0996870:CDS |
| AGCTGAACTGCTGATAAAGA+AGG | 0.508737 | 6_4:+75615337 | None:intergenic |
| AGGAAAACAGTCATTCTGTC+TGG | 0.509144 | 6_4:-75616653 | Msa0996870:CDS |
| AACTTTGAGGGGACAAGCTA+GGG | 0.509683 | 6_4:+75617402 | None:intergenic |
| GATGCGCGAAAGTTGCCATC+TGG | 0.513565 | 6_4:+75614325 | None:intergenic |
| GAACTTTGAGGGGACAAGCT+AGG | 0.515786 | 6_4:+75617401 | None:intergenic |
| ACAAGCTAATTGAACTCGGC+AGG | 0.516357 | 6_4:+75615654 | None:intergenic |
| ATGTAAGGGGCCTAGAGGAC+AGG | 0.520679 | 6_4:-75617582 | Msa0996870:CDS |
| TGTGGAAATGGATACCAGTT+GGG | 0.520816 | 6_4:-75616005 | Msa0996870:CDS |
| TAATGAAAATTGATTGTGGA+AGG | 0.527875 | 6_4:-75617133 | Msa0996870:CDS |
| TGATAAGAGAGTTCAGCAAA+AGG | 0.528578 | 6_4:-75616733 | Msa0996870:CDS |
| GTCTGTTAACAGTTGTTGGA+GGG | 0.529942 | 6_4:+75617618 | None:intergenic |
| AGTGTCAATGATGGTCATAT+AGG | 0.535951 | 6_4:-75616900 | Msa0996870:CDS |
| AACTGGAGTCTATAAGCTTG+CGG | 0.536419 | 6_4:-75614552 | Msa0996870:CDS |
| TGTCGATCACCCGATTCACT+TGG | 0.536515 | 6_4:-75615556 | Msa0996870:CDS |
| GGAGCTATGGATTAGAGATA+AGG | 0.537428 | 6_4:-75615429 | Msa0996870:CDS |
| AATCCTTTAGATAATCAAGT+TGG | 0.539023 | 6_4:-75616096 | Msa0996870:CDS |
| GAAGTAGTGCGCAAGGTGAC+TGG | 0.539391 | 6_4:-75615631 | Msa0996870:CDS |
| TCAATCTCAGAATTCAGGCT+TGG | 0.540528 | 6_4:-75620868 | Msa0996870:five_prime_UTR |
| CCGAAGACATTAGGAGGTGT+TGG | 0.541415 | 6_4:-75615388 | Msa0996870:CDS |
| CTTCCTGTGAATTCTTGTGC+GGG | 0.542058 | 6_4:-75617446 | Msa0996870:CDS |
| TTCTCACAGGATACAGGAGC+TGG | 0.542643 | 6_4:-75614623 | Msa0996870:intron |
| CCGAAGATTGATCAATGTAA+GGG | 0.542729 | 6_4:-75617596 | Msa0996870:CDS |
| GTATCTCATGTCTGCACAGT+GGG | 0.542874 | 6_4:+75615497 | None:intergenic |
| TACCGGCGACAGAACTTTGA+GGG | 0.543544 | 6_4:+75617390 | None:intergenic |
| AGATATTAAGTTCAATAACT+AGG | 0.543918 | 6_4:+75613354 | None:intergenic |
| ACCATGAGAGAATTTCCAAA+GGG | 0.544963 | 6_4:+75620821 | None:intergenic |
| TCCCCTCAAAGTTCTGTCGC+CGG | 0.546993 | 6_4:-75617392 | Msa0996870:CDS |
| GGTCTGTTAACAGTTGTTGG+AGG | 0.547149 | 6_4:+75617617 | None:intergenic |
| ACAGTGGGACACCAATCAAA+TGG | 0.549047 | 6_4:+75615512 | None:intergenic |
| GATACAAGAACTACATCCAT+TGG | 0.549842 | 6_4:-75615838 | Msa0996870:CDS |
| ATGGATTAGAGATAAGGACT+TGG | 0.552533 | 6_4:-75615423 | Msa0996870:CDS |
| AGGTTCATTGACCGAGCGTA+TGG | 0.557455 | 6_4:-75615773 | Msa0996870:CDS |
| TATCGACCTGGAAAACGGAC+TGG | 0.558231 | 6_4:-75615905 | Msa0996870:CDS |
| TGGATTAGAGATAAGGACTT+GGG | 0.560207 | 6_4:-75615422 | Msa0996870:CDS |
| AGGTTAATGAAAATTGATTG+TGG | 0.560683 | 6_4:-75617137 | Msa0996870:CDS |
| TGGAACGGCAAGAATTCTCC+AGG | 0.560916 | 6_4:+75617709 | None:intergenic |
| AAGCACCCCAAAGATACTTC+AGG | 0.561278 | 6_4:+75615475 | None:intergenic |
| AATGGACAAAACCACAGTTC+TGG | 0.561890 | 6_4:-75616039 | Msa0996870:CDS |
| CCTTCAAAGTTACAATGCAC+AGG | 0.563100 | 6_4:-75614206 | Msa0996870:intron |
| TTCCTTATTCCTTTCTACCA+AGG | 0.563965 | 6_4:+75613272 | None:intergenic |
| TGAGAGAATTTCCAAAGGGA+TGG | 0.566463 | 6_4:+75620825 | None:intergenic |
| AAAACTAAGGAATGTAAGGA+TGG | 0.567610 | 6_4:+75617745 | None:intergenic |
| GGCAAGAGCTGATGTCAACA+AGG | 0.567626 | 6_4:-75613584 | Msa0996870:CDS |
| TTTGCAGGTACTCGGTTGCA+TGG | 0.567783 | 6_4:-75614366 | Msa0996870:intron |
| ATCCTGCAACTATTCTAGGA+AGG | 0.569573 | 6_4:-75616397 | Msa0996870:CDS |
| TTGATGTTTGTCCATACGCT+CGG | 0.570111 | 6_4:+75615762 | None:intergenic |
| TCTGAATTGTAAGGTTTCAG+AGG | 0.571291 | 6_4:-75615269 | Msa0996870:CDS |
| ATACCGGCGACAGAACTTTG+AGG | 0.577106 | 6_4:+75617389 | None:intergenic |
| GTTTCTTCTGCAGATTACAA+TGG | 0.577893 | 6_4:-75616057 | Msa0996870:CDS |
| AATCACGTTAACCTAGCTTC+TGG | 0.579188 | 6_4:-75617674 | Msa0996870:CDS |
| GGGTGTTGGTCGAACAGGGA+AGG | 0.579835 | 6_4:-75616673 | Msa0996870:CDS |
| TACTTATGCTGCCAGAAGCT+AGG | 0.581768 | 6_4:+75617663 | None:intergenic |
| AACTAGTAAAATTATCGACC+TGG | 0.583619 | 6_4:-75615917 | Msa0996870:CDS |
| CTGTGGAAATGGATACCAGT+TGG | 0.583856 | 6_4:-75616006 | Msa0996870:CDS |
| TCTGGCAGCATAAGTATGGA+TGG | 0.584138 | 6_4:-75617656 | Msa0996870:CDS |
| TCCTGCAACTATTCTAGGAA+GGG | 0.585410 | 6_4:-75616396 | Msa0996870:CDS |
| AAGAACAATTCGAGTGAATG+TGG | 0.586387 | 6_4:-75616618 | Msa0996870:CDS |
| GCTATGAACAGGGTGAATGC+TGG | 0.589127 | 6_4:-75613711 | Msa0996870:intron |
| ACTTACACAGCCATATTCCT+CGG | 0.589591 | 6_4:+75617229 | None:intergenic |
| CTTCACAAGCTAATTGAACT+CGG | 0.589756 | 6_4:+75615650 | None:intergenic |
| AACGAGGAAACGCGGAACAG+TGG | 0.591159 | 6_4:-75616774 | Msa0996870:CDS |
| GAGGGTGAAAATCATAAACT+AGG | 0.592979 | 6_4:-75615808 | Msa0996870:CDS |
| CCTATTCTCCTGAGAACAGG+AGG | 0.597713 | 6_4:+75614819 | None:intergenic |
| TGAAAATCATAAACTAGGTG+AGG | 0.598351 | 6_4:-75615803 | Msa0996870:CDS |
| AAGAAGCAGTCAAGTGAAAG+CGG | 0.601655 | 6_4:-75617275 | Msa0996870:CDS |
| GCTTCATGATAGAGAAACAA+AGG | 0.601736 | 6_4:-75617012 | Msa0996870:CDS |
| GTAATGGAGATTCAGACCAA+TGG | 0.602419 | 6_4:-75616270 | Msa0996870:CDS |
| CCTATTTACCGTATACCAGA+TGG | 0.605043 | 6_4:-75614340 | Msa0996870:CDS |
| GAAGATCCGAAGACATTAGG+AGG | 0.609669 | 6_4:-75615394 | Msa0996870:CDS |
| ATTGAGACACTGCACTGGAA+CGG | 0.612213 | 6_4:+75617694 | None:intergenic |
| ACGTGATTGAGACACTGCAC+TGG | 0.614317 | 6_4:+75617689 | None:intergenic |
| AGCTTGTGAAGTAGTGCGCA+AGG | 0.614344 | 6_4:-75615638 | Msa0996870:CDS |
| AACCATGAGAGAATTTCCAA+AGG | 0.614365 | 6_4:+75620820 | None:intergenic |
| CTTCCCGCACAAGAATTCAC+AGG | 0.614828 | 6_4:+75617443 | None:intergenic |
| TTCCTACAGAATAGCTCAAG+CGG | 0.615557 | 6_4:-75615686 | Msa0996870:CDS |
| AATTCGAGTGAATGTGGCGG+TGG | 0.615942 | 6_4:-75616612 | Msa0996870:CDS |
| TAGCTGAATAAGCACTCGGA+GGG | 0.616482 | 6_4:+75617558 | None:intergenic |
| TACATCCATTGGTCAAATCG+AGG | 0.617200 | 6_4:-75615827 | Msa0996870:CDS |
| TCACAGTGAACAATTTCATG+TGG | 0.618983 | 6_4:-75616220 | Msa0996870:CDS |
| AGTTCACATGAAACAGAGAG+TGG | 0.619324 | 6_4:-75616177 | Msa0996870:CDS |
| AGTGATGAAAGTGTCAATGA+TGG | 0.620052 | 6_4:-75616909 | Msa0996870:CDS |
| ACATCCATTGGTCAAATCGA+GGG | 0.622167 | 6_4:-75615826 | Msa0996870:CDS |
| GCTGAACTGCTGATAAAGAA+GGG | 0.624797 | 6_4:+75615338 | None:intergenic |
| GCACGGAGAACAGAAATGCT+AGG | 0.625222 | 6_4:-75613670 | Msa0996870:CDS |
| TTCAGCTGAATCAAACTGCA+CGG | 0.625736 | 6_4:-75613687 | Msa0996870:CDS |
| GAATGACAAAAGCAATGTTG+TGG | 0.627764 | 6_4:-75617102 | Msa0996870:CDS |
| TTTCGGGTGTTGGTCGAACA+GGG | 0.628801 | 6_4:-75616677 | Msa0996870:CDS |
| ACTTCCTGTGAATTCTTGTG+CGG | 0.632150 | 6_4:-75617447 | Msa0996870:CDS |
| GAATGTTGTTTCAGGACCTG+AGG | 0.632188 | 6_4:-75616490 | Msa0996870:CDS |
| GGGACAAAATAGGCACGGAA+CGG | 0.636437 | 6_4:+75615358 | None:intergenic |
| TGGGAGTGGTATGAGAAACA+TGG | 0.636700 | 6_4:-75615451 | Msa0996870:CDS |
| GCAAGAGCTGATGTCAACAA+GGG | 0.637519 | 6_4:-75613583 | Msa0996870:CDS |
| CGAAGATTGATCAATGTAAG+GGG | 0.638856 | 6_4:-75617595 | Msa0996870:CDS |
| AATCCAGTCGAAAACTTATG+GGG | 0.640417 | 6_4:-75614584 | Msa0996870:CDS |
| AATGCTAGGCATAAACCCCT+CGG | 0.640420 | 6_4:-75613656 | Msa0996870:CDS |
| AACCTGCAGCAGCAATGATG+TGG | 0.642009 | 6_4:-75617195 | Msa0996870:CDS |
| AAGAAGGGACAAAATAGGCA+CGG | 0.642851 | 6_4:+75615353 | None:intergenic |
| CAGGCAAGGAAGATGCGTTG+TGG | 0.647074 | 6_4:-75618843 | Msa0996870:CDS |
| CAATAACTATGAACATAACG+AGG | 0.651089 | 6_4:-75616790 | Msa0996870:CDS |
| CACCGCTTGAGCTATTCTGT+AGG | 0.651467 | 6_4:+75615684 | None:intergenic |
| GATCAATGTAAGGGGCCTAG+AGG | 0.651470 | 6_4:-75617587 | Msa0996870:CDS |
| GATTTAGCTGAATAAGCACT+CGG | 0.653187 | 6_4:+75617554 | None:intergenic |
| ATGAACATAACGAGGAAACG+CGG | 0.660362 | 6_4:-75616782 | Msa0996870:CDS |
| TGAAAGAGAACTTCGTACCG+AGG | 0.660560 | 6_4:-75617246 | Msa0996870:CDS |
| CTGCGACTCTTGTATCGATG+AGG | 0.670376 | 6_4:-75617066 | Msa0996870:CDS |
| AACTGGTATCCATTTCCACA+GGG | 0.674483 | 6_4:+75616008 | None:intergenic |
| CAAGAGCTGATGTCAACAAG+GGG | 0.675628 | 6_4:-75613582 | Msa0996870:CDS |
| TCTCAGGAAAATAATCAACA+AGG | 0.676509 | 6_4:-75616297 | Msa0996870:CDS |
| TATAGGAAAATCGTTCAACA+AGG | 0.686976 | 6_4:-75616883 | Msa0996870:CDS |
| ACCGGCGACAGAACTTTGAG+GGG | 0.695996 | 6_4:+75617391 | None:intergenic |
| GGTATCTCATGTCTGCACAG+TGG | 0.699950 | 6_4:+75615496 | None:intergenic |
| ACTACACAAGAATCCAGAGT+CGG | 0.700054 | 6_4:+75614244 | None:intergenic |
| GGGAGTGGTATGAGAAACAT+GGG | 0.705261 | 6_4:-75615450 | Msa0996870:CDS |
| CTATTCTCCTGAGAACAGGA+GGG | 0.706795 | 6_4:+75614820 | None:intergenic |
| AACAATTCGAGTGAATGTGG+CGG | 0.707906 | 6_4:-75616615 | Msa0996870:CDS |
| TTAGCTGAATAAGCACTCGG+AGG | 0.713030 | 6_4:+75617557 | None:intergenic |
| GGGCTGTAGAGCCAGAACTG+TGG | 0.723217 | 6_4:+75616028 | None:intergenic |
| GTTCTGGCTCTACAGCCCTG+TGG | 0.725304 | 6_4:-75616023 | Msa0996870:CDS |
| AGATACCTGAAGTATCTTTG+GGG | 0.728110 | 6_4:-75615480 | Msa0996870:CDS |
| TAATTGCATGAGTAACACCA+AGG | 0.746961 | 6_4:-75617357 | Msa0996870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTCTAACATAATAAAA+TGG | + | chr6_4:75614273-75614292 | None:intergenic | 10.0% |
| !! | TTATTATGTTAGAATTAAAA+AGG | - | chr6_4:75614275-75614294 | Msa0996870:CDS | 10.0% |
| !!! | TTTTTTCCTTTTTTATTTTT+TGG | - | chr6_4:75615224-75615243 | Msa0996870:CDS | 10.0% |
| !!! | TTGGTTTTATTGTATTTTTT+GGG | + | chr6_4:75613177-75613196 | None:intergenic | 15.0% |
| !!! | TTTGGTTTTATTGTATTTTT+TGG | + | chr6_4:75613178-75613197 | None:intergenic | 15.0% |
| !! | AAAACACTAAAAAATCAAAT+GGG | + | chr6_4:75613385-75613404 | None:intergenic | 15.0% |
| !! | AAAAACACTAAAAAATCAAA+TGG | + | chr6_4:75613386-75613405 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAACACTCAAAT+GGG | + | chr6_4:75613518-75613537 | None:intergenic | 15.0% |
| !! | TCTAAAAATAAGAAAATCTT+TGG | - | chr6_4:75613744-75613763 | Msa0996870:intron | 15.0% |
| !!! | TATTTTAAGATTATGATTTG+TGG | - | chr6_4:75613848-75613867 | Msa0996870:intron | 15.0% |
| !!! | TAATTTTTGTTAATTAAGAG+TGG | - | chr6_4:75613951-75613970 | Msa0996870:intron | 15.0% |
| !!! | CAATTTTATTGAAAATTTTC+AGG | + | chr6_4:75614345-75614364 | None:intergenic | 15.0% |
| !! | AAAATCGATCAAATAATTAA+GGG | + | chr6_4:75615417-75615436 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAAAAAGAGATA+AGG | + | chr6_4:75615455-75615474 | None:intergenic | 15.0% |
| !! | AAAAATTGTAATAATTCTGT+TGG | - | chr6_4:75617587-75617606 | Msa0996870:CDS | 15.0% |
| !! | TTAAAATTAATGAAATGAAG+TGG | - | chr6_4:75620082-75620101 | Msa0996870:intron | 15.0% |
| !! | AAAATTATTTGTATCTAGTT+TGG | + | chr6_4:75620650-75620669 | None:intergenic | 15.0% |
| !!! | AACTAGATACAAATAATTTT+TGG | - | chr6_4:75620650-75620669 | Msa0996870:intron | 15.0% |
| !! | ATAATTGTAAAGAGTAAAAA+AGG | + | chr6_4:75620797-75620816 | None:intergenic | 15.0% |
| !! | TATTAGTAGAATTATGAATA+TGG | - | chr6_4:75620876-75620895 | Msa0996870:five_prime_UTR | 15.0% |
| !! | ATTTGATTGTTTGAAAAGTT+TGG | - | chr6_4:75613419-75613438 | Msa0996870:three_prime_UTR | 20.0% |
| !!! | AAAGTTTGGTTTTTGAATAA+TGG | - | chr6_4:75613433-75613452 | Msa0996870:three_prime_UTR | 20.0% |
| !!! | AAGTTTGGTTTTTGAATAAT+GGG | - | chr6_4:75613434-75613453 | Msa0996870:three_prime_UTR | 20.0% |
| !! | CAAAAAAAAAAACACTCAAA+TGG | + | chr6_4:75613519-75613538 | None:intergenic | 20.0% |
| !!! | AAAGTTTGGTTTATGAATAA+TGG | - | chr6_4:75613573-75613592 | Msa0996870:CDS | 20.0% |
| !!! | AAGTTTGGTTTATGAATAAT+GGG | - | chr6_4:75613574-75613593 | Msa0996870:CDS | 20.0% |
| !! | GTTGTGTTTAAATTTATCTA+AGG | - | chr6_4:75613973-75613992 | Msa0996870:intron | 20.0% |
| !! | TTAAATTATCCACAAATGAA+AGG | + | chr6_4:75614031-75614050 | None:intergenic | 20.0% |
| !! | ACAAATAAAACTAAAGTTTC+AGG | + | chr6_4:75614099-75614118 | None:intergenic | 20.0% |
| !! | TTATTATGCTAGAACTAAAA+CGG | - | chr6_4:75614788-75614807 | Msa0996870:intron | 20.0% |
| !! | AAATAATTAAGGGAAAAAAC+AGG | + | chr6_4:75615407-75615426 | None:intergenic | 20.0% |
| !! | CAAAATCGATCAAATAATTA+AGG | + | chr6_4:75615418-75615437 | None:intergenic | 20.0% |
| !!! | CTTAATTATTTGATCGATTT+TGG | - | chr6_4:75615416-75615435 | Msa0996870:CDS | 20.0% |
| !!! | TTTTCGTTCTTATAGTTATA+TGG | - | chr6_4:75615578-75615597 | Msa0996870:CDS | 20.0% |
| !!! | CTCATTATAGAATAACTTTT+AGG | - | chr6_4:75615694-75615713 | Msa0996870:CDS | 20.0% |
| !!! | TAAAATAAACTATGAGCTTT+TGG | + | chr6_4:75615724-75615743 | None:intergenic | 20.0% |
| !!! | GAAAGTACTTTTGAAAAATT+GGG | + | chr6_4:75616253-75616272 | None:intergenic | 20.0% |
| !!! | AGAAAGTACTTTTGAAAAAT+TGG | + | chr6_4:75616254-75616273 | None:intergenic | 20.0% |
| !! | AGTTCTGTTAATTATTTATC+AGG | - | chr6_4:75616331-75616350 | Msa0996870:CDS | 20.0% |
| !!! | TTCTAGTTTCAACAAATTTT+CGG | - | chr6_4:75617409-75617428 | Msa0996870:CDS | 20.0% |
| !!! | TAACACAATTTCTAAGAAAA+AGG | + | chr6_4:75619246-75619265 | None:intergenic | 20.0% |
| !! | AAATGAAATGACAAACTTAA+AGG | + | chr6_4:75619979-75619998 | None:intergenic | 20.0% |
| !! | AAATAAACATTGATCTAGAA+AGG | + | chr6_4:75620013-75620032 | None:intergenic | 20.0% |
| !!! | GCAAAATAATTAGTTTTCAA+TGG | - | chr6_4:75620104-75620123 | Msa0996870:intron | 20.0% |
| !!! | TATCTCTGTAAAATTGATTT+AGG | - | chr6_4:75620128-75620147 | Msa0996870:intron | 20.0% |
| !!! | ATCTCTGTAAAATTGATTTA+GGG | - | chr6_4:75620129-75620148 | Msa0996870:intron | 20.0% |
| !! | TTGTTTATATGATAAGCTTT+AGG | + | chr6_4:75620304-75620323 | None:intergenic | 20.0% |
| !!! | TTTTTTACTGTGAAATCTTT+AGG | + | chr6_4:75620616-75620635 | None:intergenic | 20.0% |
| !! | AGATATTAAGTTCAATAACT+AGG | + | chr6_4:75620752-75620771 | None:intergenic | 20.0% |
| ! | ATTTGATTGCATGAAAAGTT+TGG | - | chr6_4:75613559-75613578 | Msa0996870:CDS | 25.0% |
| !!! | TTTTTTTTTGTTCATGTGTG+TGG | - | chr6_4:75613691-75613710 | Msa0996870:CDS | 25.0% |
| ! | ATACAAATCTCCTTAGATTT+AGG | + | chr6_4:75613798-75613817 | None:intergenic | 25.0% |
| ! | TAAATCTAAGGAGATTTGTA+TGG | - | chr6_4:75613797-75613816 | Msa0996870:intron | 25.0% |
| !!! | TCTTTTCCTGATTTTGATTT+TGG | - | chr6_4:75614051-75614070 | Msa0996870:intron | 25.0% |
| !!! | AATGTCATCTTTTAGAACTT+AGG | - | chr6_4:75614434-75614453 | Msa0996870:intron | 25.0% |
| ! | TATGAAAGTAAAGAAGCTTA+CGG | - | chr6_4:75614478-75614497 | Msa0996870:intron | 25.0% |
| ! | TTCATCTAACATAAAAGACA+CGG | + | chr6_4:75614695-75614714 | None:intergenic | 25.0% |
| ! | GTTCTAGCATAATAAATCAA+TGG | + | chr6_4:75614783-75614802 | None:intergenic | 25.0% |
| ! | ATTTAACAACATAGTCCAAA+TGG | + | chr6_4:75614911-75614930 | None:intergenic | 25.0% |
| ! | TAAATTGTTCTATGCTTGTT+TGG | - | chr6_4:75614406-75614425 | Msa0996870:intron | 25.0% |
| !!! | GTTTTCACAATTAACTTGTA+TGG | + | chr6_4:75615121-75615140 | None:intergenic | 25.0% |
| ! | CATTGGCCAAAAAATAAAAA+AGG | + | chr6_4:75615233-75615252 | None:intergenic | 25.0% |
| !!! | CTTTTTTATTTTTTGGCCAA+TGG | - | chr6_4:75615231-75615250 | Msa0996870:CDS | 25.0% |
| ! | AATACATTCAAGCTTCTTAA+TGG | - | chr6_4:75616218-75616237 | Msa0996870:CDS | 25.0% |
| !! | TATGAAAGAAGAAGTTTTAC+TGG | - | chr6_4:75616573-75616592 | Msa0996870:CDS | 25.0% |
| !! | AATTTTCATTAACCTATCGT+CGG | + | chr6_4:75616961-75616980 | None:intergenic | 25.0% |
| ! | AGGTTAATGAAAATTGATTG+TGG | - | chr6_4:75616966-75616985 | Msa0996870:CDS | 25.0% |
| ! | TAATGAAAATTGATTGTGGA+AGG | - | chr6_4:75616970-75616989 | Msa0996870:CDS | 25.0% |
| ! | TAATGATATACAAGACTCTT+TGG | - | chr6_4:75617142-75617161 | Msa0996870:CDS | 25.0% |
| !!! | TCTAGTTTCAACAAATTTTC+GGG | - | chr6_4:75617410-75617429 | Msa0996870:CDS | 25.0% |
| !!! | TTACAATTTTTGATAGCTGA+AGG | + | chr6_4:75617578-75617597 | None:intergenic | 25.0% |
| ! | TCGAAAATCAAAAGGTAAAA+TGG | - | chr6_4:75617664-75617683 | Msa0996870:CDS | 25.0% |
| ! | TGTGTTAAATGATAACTTGA+AGG | - | chr6_4:75617748-75617767 | Msa0996870:CDS | 25.0% |
| ! | AATCCTTTAGATAATCAAGT+TGG | - | chr6_4:75618007-75618026 | Msa0996870:intron | 25.0% |
| !!! | GAAATTGTGTTACTTATTGT+TGG | - | chr6_4:75619254-75619273 | Msa0996870:intron | 25.0% |
| ! | CTAGATCAATGTTTATTTAG+AGG | - | chr6_4:75620015-75620034 | Msa0996870:intron | 25.0% |
| !! | TATAAGTTGAAAACAGCTTA+TGG | + | chr6_4:75620245-75620264 | None:intergenic | 25.0% |
| !!! | TTTTTCTTAAAGAGCGTTTA+AGG | - | chr6_4:75620470-75620489 | Msa0996870:intron | 25.0% |
| !!! | AATAATTTTTGGCTACATTC+AGG | - | chr6_4:75620661-75620680 | Msa0996870:intron | 25.0% |
| ! | TAGAATGTCACATTTCAATT+AGG | - | chr6_4:75620684-75620703 | Msa0996870:intron | 25.0% |
| !! | AATTAGGATCAAAGTGTTAT+TGG | - | chr6_4:75620700-75620719 | Msa0996870:intron | 25.0% |
| !! | TTATATTGCATGTGTCTTTT+AGG | - | chr6_4:75620725-75620744 | Msa0996870:intron | 25.0% |
| ! | ATACTTAATTGTCGAATTTG+AGG | - | chr6_4:75620932-75620951 | Msa0996870:five_prime_UTR | 25.0% |
| ATCAATCAATCTCAGAATTC+AGG | - | chr6_4:75613230-75613249 | Msa0996870:three_prime_UTR | 30.0% | |
| !! | GGTTTATGAATAATGGGTTA+TGG | - | chr6_4:75613580-75613599 | Msa0996870:CDS | 30.0% |
| ! | GGATAATGATCTTGTTTATG+AGG | - | chr6_4:75613712-75613731 | Msa0996870:intron | 30.0% |
| ! | TAATGATCTTGTTTATGAGG+TGG | - | chr6_4:75613715-75613734 | Msa0996870:intron | 30.0% |
| GTAACATGAACCTAAATCTA+AGG | - | chr6_4:75613785-75613804 | Msa0996870:intron | 30.0% | |
| ! | AATTTATCTAAGGCTTAGTG+AGG | - | chr6_4:75613983-75614002 | Msa0996870:intron | 30.0% |
| GTTTCTCCAAAATCAAAATC+AGG | + | chr6_4:75614060-75614079 | None:intergenic | 30.0% | |
| ! | AAGTTAGTTCTTATCTGTGT+TGG | - | chr6_4:75614373-75614392 | Msa0996870:intron | 30.0% |
| TTCTTATCTGTGTTGGATTA+CGG | - | chr6_4:75614380-75614399 | Msa0996870:intron | 30.0% | |
| !! | ATTGTTCTATGCTTGTTGTT+TGG | - | chr6_4:75614409-75614428 | Msa0996870:intron | 30.0% |
| TGGTTCTTTCTGTAATGTTT+AGG | - | chr6_4:75614510-75614529 | Msa0996870:intron | 30.0% | |
| ACAGATTCTCAATGAACTAA+AGG | + | chr6_4:75614618-75614637 | None:intergenic | 30.0% | |
| AGATCATCCATGTTTGATAA+AGG | - | chr6_4:75614664-75614683 | Msa0996870:intron | 30.0% | |
| TATGTTAGATGAAATGTGCT+AGG | - | chr6_4:75614702-75614721 | Msa0996870:intron | 30.0% | |
| AGAAAGAGATCGAAATTTGT+TGG | - | chr6_4:75614748-75614767 | Msa0996870:intron | 30.0% | |
| GACTAATTCAGAATCTTTGA+AGG | + | chr6_4:75614816-75614835 | None:intergenic | 30.0% | |
| TTAGTCCTGTTCACTAAAAT+TGG | - | chr6_4:75614830-75614849 | Msa0996870:CDS | 30.0% | |
| !! | TTAAGCCAATTTTAGTGAAC+AGG | + | chr6_4:75614838-75614857 | None:intergenic | 30.0% |
| ATGTTAATTCTTATCTGTGC+AGG | - | chr6_4:75614860-75614879 | Msa0996870:intron | 30.0% | |
| !! | AATTAACTTGTATGGACTCT+CGG | + | chr6_4:75615113-75615132 | None:intergenic | 30.0% |
| !! | AAATAGCACTTTTCAAGACA+AGG | + | chr6_4:75615191-75615210 | None:intergenic | 30.0% |
| ! | TATCTTTACCTTTTGTCTGA+GGG | + | chr6_4:75615286-75615305 | None:intergenic | 30.0% |
| ACACAACAAAGTTACAACTT+TGG | - | chr6_4:75615358-75615377 | Msa0996870:CDS | 30.0% | |
| AGAAATGTAATTAGCAGTCT+AGG | + | chr6_4:75615660-75615679 | None:intergenic | 30.0% | |
| CTTTATTCTATGACCTTGTT+TGG | - | chr6_4:75615753-75615772 | Msa0996870:CDS | 30.0% | |
| ATTAAGCTGTTATCCAAACA+AGG | + | chr6_4:75615769-75615788 | None:intergenic | 30.0% | |
| AGTAGATATATAGCCTGTTT+GGG | + | chr6_4:75616041-75616060 | None:intergenic | 30.0% | |
| AAGTAGATATATAGCCTGTT+TGG | + | chr6_4:75616042-75616061 | None:intergenic | 30.0% | |
| AAAACTAAGGAATGTAAGGA+TGG | + | chr6_4:75616361-75616380 | None:intergenic | 30.0% | |
| TATAGGAAAATCGTTCAACA+AGG | - | chr6_4:75617220-75617239 | Msa0996870:CDS | 30.0% | |
| CAATAACTATGAACATAACG+AGG | - | chr6_4:75617313-75617332 | Msa0996870:CDS | 30.0% | |
| !!! | TTCACGTTTTTTTTATCCTC+AGG | + | chr6_4:75617632-75617651 | None:intergenic | 30.0% |
| AAAGTCAGTCGAAAATCAAA+AGG | - | chr6_4:75617656-75617675 | Msa0996870:CDS | 30.0% | |
| ATGGATTCAGTTCCAAAAAA+AGG | - | chr6_4:75617683-75617702 | Msa0996870:CDS | 30.0% | |
| TAACACAGTCCTGTTAAAAT+TGG | + | chr6_4:75617735-75617754 | None:intergenic | 30.0% | |
| TCTCAGGAAAATAATCAACA+AGG | - | chr6_4:75617806-75617825 | Msa0996870:intron | 30.0% | |
| GGAAAATAATCAACAAGGAT+TGG | - | chr6_4:75617811-75617830 | Msa0996870:intron | 30.0% | |
| ! | TAATCAACAAGGATTGGTAA+TGG | - | chr6_4:75617817-75617836 | Msa0996870:intron | 30.0% |
| !! | ATGTGAACTTTTCAGGATAT+CGG | + | chr6_4:75617915-75617934 | None:intergenic | 30.0% |
| TGACCAACTTGATTATCTAA+AGG | + | chr6_4:75618013-75618032 | None:intergenic | 30.0% | |
| ! | AGGTCGATAATTTTACTAGT+TGG | + | chr6_4:75618187-75618206 | None:intergenic | 30.0% |
| AACTAGTAAAATTATCGACC+TGG | - | chr6_4:75618186-75618205 | Msa0996870:intron | 30.0% | |
| AAAATTATCGACCTGGAAAA+CGG | - | chr6_4:75618193-75618212 | Msa0996870:intron | 30.0% | |
| ! | TGAGAAAGAGAATCTGATTT+TGG | + | chr6_4:75618226-75618245 | None:intergenic | 30.0% |
| AGATTCTCTTTCTCAAAATC+AGG | - | chr6_4:75618231-75618250 | Msa0996870:intron | 30.0% | |
| TGAAAATCATAAACTAGGTG+AGG | - | chr6_4:75618300-75618319 | Msa0996870:intron | 30.0% | |
| !!! | AATCAAATGGTTTTTTGCAC+AGG | + | chr6_4:75618581-75618600 | None:intergenic | 30.0% |
| TGTGCAAAAAACCATTTGAT+TGG | - | chr6_4:75618580-75618599 | Msa0996870:intron | 30.0% | |
| TGATAAAGAAGGGACAAAAT+AGG | + | chr6_4:75618758-75618777 | None:intergenic | 30.0% | |
| TGACAACTTTCTGAATTGTA+AGG | - | chr6_4:75618825-75618844 | Msa0996870:CDS | 30.0% | |
| AGAAAAAGGAACAGATGAAA+TGG | + | chr6_4:75619232-75619251 | None:intergenic | 30.0% | |
| CTGCAAAAAAAATAAGTGTG+TGG | - | chr6_4:75619401-75619420 | Msa0996870:intron | 30.0% | |
| TTTGAATTTCATCTTCTCAC+AGG | - | chr6_4:75619467-75619486 | Msa0996870:intron | 30.0% | |
| AAATCCAGTCGAAAACTTAT+GGG | - | chr6_4:75619518-75619537 | Msa0996870:intron | 30.0% | |
| ATGATCATTTACCAAGATCT+AGG | + | chr6_4:75619586-75619605 | None:intergenic | 30.0% | |
| AGGTTATTTGAGAAAGCTAA+TGG | - | chr6_4:75620201-75620220 | Msa0996870:intron | 30.0% | |
| ACACAAGCACTTATATGATA+AGG | - | chr6_4:75620364-75620383 | Msa0996870:intron | 30.0% | |
| ATAAGGTTTATGCTATGAAC+AGG | - | chr6_4:75620381-75620400 | Msa0996870:intron | 30.0% | |
| TAAGGTTTATGCTATGAACA+GGG | - | chr6_4:75620382-75620401 | Msa0996870:intron | 30.0% | |
| CACAGTAAAAAATGATGAGT+AGG | - | chr6_4:75620624-75620643 | Msa0996870:intron | 30.0% | |
| ! | TTGAGGTGCTTATTAAACAT+AGG | - | chr6_4:75620949-75620968 | Msa0996870:five_prime_UTR | 30.0% |
| ACCATGAGAGAATTTCCAAA+GGG | + | chr6_4:75613285-75613304 | None:intergenic | 35.0% | |
| AACCATGAGAGAATTTCCAA+AGG | + | chr6_4:75613286-75613305 | None:intergenic | 35.0% | |
| !!! | GGTTTTTGAATAATGGGCTA+TGG | - | chr6_4:75613440-75613459 | Msa0996870:three_prime_UTR | 35.0% |
| TAAGGAGATTTGTATGGCTA+AGG | - | chr6_4:75613803-75613822 | Msa0996870:intron | 35.0% | |
| GATTTGTATGGCTAAGGATA+CGG | - | chr6_4:75613809-75613828 | Msa0996870:intron | 35.0% | |
| ! | GCTTCTAGATTTTGTAGCAA+TGG | - | chr6_4:75613885-75613904 | Msa0996870:intron | 35.0% |
| AGAGAAACACCTTTCATTTG+TGG | - | chr6_4:75614019-75614038 | Msa0996870:intron | 35.0% | |
| TTCATGAAAGCCGAGAAATT+CGG | - | chr6_4:75614118-75614137 | Msa0996870:intron | 35.0% | |
| !! | TTTGCAACTTGGTGGATTAA+AGG | - | chr6_4:75614154-75614173 | Msa0996870:intron | 35.0% |
| ! | GAAATGTGCTAGCATTGTTT+TGG | - | chr6_4:75614202-75614221 | Msa0996870:intron | 35.0% |
| CTTGAATTCGCAAACTTTGT+AGG | + | chr6_4:75614303-75614322 | None:intergenic | 35.0% | |
| CTACAAAGTTTGCGAATTCA+AGG | - | chr6_4:75614301-75614320 | Msa0996870:CDS | 35.0% | |
| !! | GAACTAAAGGCATCTATAGT+CGG | + | chr6_4:75614605-75614624 | None:intergenic | 35.0% |
| !! | TGTGCAAGTTGATTGTGAAA+AGG | - | chr6_4:75614635-75614654 | Msa0996870:intron | 35.0% |
| !! | GTGCAAGTTGATTGTGAAAA+GGG | - | chr6_4:75614636-75614655 | Msa0996870:intron | 35.0% |
| TGCAGGTTGTTTGTATTGTT+CGG | - | chr6_4:75614877-75614896 | Msa0996870:intron | 35.0% | |
| TGTTCGGAATCTATACCATT+TGG | - | chr6_4:75614893-75614912 | Msa0996870:intron | 35.0% | |
| ! | CTATCTTTACCTTTTGTCTG+AGG | + | chr6_4:75615287-75615306 | None:intergenic | 35.0% |
| !! | TTGCTGATTTGTCGTTGATT+TGG | + | chr6_4:75615339-75615358 | None:intergenic | 35.0% |
| !! | TGTTTTATTCAGCACTCTCA+AGG | - | chr6_4:75615484-75615503 | Msa0996870:CDS | 35.0% |
| AAGCTATTGTAGAGAGCTTA+TGG | - | chr6_4:75615903-75615922 | Msa0996870:CDS | 35.0% | |
| CTACTGGCAAAAACAATTGT+GGG | + | chr6_4:75615999-75616018 | None:intergenic | 35.0% | |
| TCTACTGGCAAAAACAATTG+TGG | + | chr6_4:75616000-75616019 | None:intergenic | 35.0% | |
| ATAGCAAGAAGAATAGGCAT+GGG | + | chr6_4:75616072-75616091 | None:intergenic | 35.0% | |
| ACGAAGATAGCAAGAAGAAT+AGG | + | chr6_4:75616078-75616097 | None:intergenic | 35.0% | |
| ! | ACTGCTTGAAAGTTTTTGCA+TGG | + | chr6_4:75616180-75616199 | None:intergenic | 35.0% |
| GCTCAAAACTAAGGAATGTA+AGG | + | chr6_4:75616365-75616384 | None:intergenic | 35.0% | |
| ACCGAAGATTGATCAATGTA+AGG | - | chr6_4:75616506-75616525 | Msa0996870:CDS | 35.0% | |
| CCCTTACATTGATCAATCTT+CGG | + | chr6_4:75616510-75616529 | None:intergenic | 35.0% | |
| CCGAAGATTGATCAATGTAA+GGG | - | chr6_4:75616507-75616526 | Msa0996870:CDS | 35.0% | |
| CGAAGATTGATCAATGTAAG+GGG | - | chr6_4:75616508-75616527 | Msa0996870:CDS | 35.0% | |
| GATTTAGCTGAATAAGCACT+CGG | + | chr6_4:75616552-75616571 | None:intergenic | 35.0% | |
| GCAATTATCAGACGAAATAC+CGG | + | chr6_4:75616733-75616752 | None:intergenic | 35.0% | |
| TAATTGCATGAGTAACACCA+AGG | - | chr6_4:75616746-75616765 | Msa0996870:CDS | 35.0% | |
| TGCAGAAAAACTCAAGAAGA+AGG | - | chr6_4:75616781-75616800 | Msa0996870:CDS | 35.0% | |
| GCAGAAAAACTCAAGAAGAA+GGG | - | chr6_4:75616782-75616801 | Msa0996870:CDS | 35.0% | |
| ! | ATTTTTCATCTTCCGACGAT+AGG | - | chr6_4:75616946-75616965 | Msa0996870:CDS | 35.0% |
| GAATGACAAAAGCAATGTTG+TGG | - | chr6_4:75617001-75617020 | Msa0996870:CDS | 35.0% | |
| GCTTCATGATAGAGAAACAA+AGG | - | chr6_4:75617091-75617110 | Msa0996870:CDS | 35.0% | |
| ! | TATACAAGACTCTTTGGTGT+TGG | - | chr6_4:75617148-75617167 | Msa0996870:CDS | 35.0% |
| !! | TTCATCACTTTTCGAACCAA+TGG | + | chr6_4:75617183-75617202 | None:intergenic | 35.0% |
| !! | AGTGATGAAAGTGTCAATGA+TGG | - | chr6_4:75617194-75617213 | Msa0996870:CDS | 35.0% |
| AGTGTCAATGATGGTCATAT+AGG | - | chr6_4:75617203-75617222 | Msa0996870:CDS | 35.0% | |
| ! | TCAGGAGATGAGTATTTTCT+TGG | - | chr6_4:75617266-75617285 | Msa0996870:CDS | 35.0% |
| ! | GATGAGTATTTTCTTGGTCA+AGG | - | chr6_4:75617272-75617291 | Msa0996870:CDS | 35.0% |
| TGATAAGAGAGTTCAGCAAA+AGG | - | chr6_4:75617370-75617389 | Msa0996870:CDS | 35.0% | |
| !!! | TTCAACAAATTTTCGGGTGT+TGG | - | chr6_4:75617416-75617435 | Msa0996870:CDS | 35.0% |
| AAGAACAATTCGAGTGAATG+TGG | - | chr6_4:75617485-75617504 | Msa0996870:CDS | 35.0% | |
| !!! | TAGTTGCAGGATCCTTTTTT+TGG | + | chr6_4:75617698-75617717 | None:intergenic | 35.0% |
| TTCTTCAACTATCTCATCTC+AGG | - | chr6_4:75617790-75617809 | Msa0996870:intron | 35.0% | |
| TCACAGTGAACAATTTCATG+TGG | - | chr6_4:75617883-75617902 | Msa0996870:intron | 35.0% | |
| ! | CTGTTTCATGTGAACTTTTC+AGG | + | chr6_4:75617922-75617941 | None:intergenic | 35.0% |
| GTTTCTTCTGCAGATTACAA+TGG | - | chr6_4:75618046-75618065 | Msa0996870:intron | 35.0% | |
| ! | CTAGTTGGTTCATCAGAATA+TGG | + | chr6_4:75618172-75618191 | None:intergenic | 35.0% |
| ATGGATGTAGTTCTTGTATC+TGG | + | chr6_4:75618265-75618284 | None:intergenic | 35.0% | |
| GATACAAGAACTACATCCAT+TGG | - | chr6_4:75618265-75618284 | Msa0996870:intron | 35.0% | |
| GAGGGTGAAAATCATAAACT+AGG | - | chr6_4:75618295-75618314 | Msa0996870:intron | 35.0% | |
| CTTCACAAGCTAATTGAACT+CGG | + | chr6_4:75618456-75618475 | None:intergenic | 35.0% | |
| !! | GTTTTTCAAACTCTGCAACA+GGG | + | chr6_4:75618501-75618520 | None:intergenic | 35.0% |
| !! | AGTTTTTCAAACTCTGCAAC+AGG | + | chr6_4:75618502-75618521 | None:intergenic | 35.0% |
| ! | TGAGATACCTGAAGTATCTT+TGG | - | chr6_4:75618621-75618640 | Msa0996870:intron | 35.0% |
| ! | GAGATACCTGAAGTATCTTT+GGG | - | chr6_4:75618622-75618641 | Msa0996870:intron | 35.0% |
| ! | AGATACCTGAAGTATCTTTG+GGG | - | chr6_4:75618623-75618642 | Msa0996870:intron | 35.0% |
| !! | ATGGATTAGAGATAAGGACT+TGG | - | chr6_4:75618680-75618699 | Msa0996870:intron | 35.0% |
| ! | TGGATTAGAGATAAGGACTT+GGG | - | chr6_4:75618681-75618700 | Msa0996870:intron | 35.0% |
| TATGAAGATCCGAAGACATT+AGG | - | chr6_4:75618706-75618725 | Msa0996870:intron | 35.0% | |
| TCTGAATTGTAAGGTTTCAG+AGG | - | chr6_4:75618834-75618853 | Msa0996870:CDS | 35.0% | |
| GAACAGATGAACAGATGAAA+TGG | + | chr6_4:75619187-75619206 | None:intergenic | 35.0% | |
| CAAATCCAGTCGAAAACTTA+TGG | - | chr6_4:75619517-75619536 | Msa0996870:intron | 35.0% | |
| AATCCAGTCGAAAACTTATG+GGG | - | chr6_4:75619519-75619538 | Msa0996870:intron | 35.0% | |
| TTTCTGACTTTCCATTCACT+TGG | - | chr6_4:75619802-75619821 | Msa0996870:intron | 35.0% | |
| TTCTGACTTTCCATTCACTT+GGG | - | chr6_4:75619803-75619822 | Msa0996870:intron | 35.0% | |
| !! | GTTGTTTTCATGAGCTATCT+TGG | + | chr6_4:75620282-75620301 | None:intergenic | 35.0% |
| TGAAGAAACAGCATCTCTTA+TGG | - | chr6_4:75620498-75620517 | Msa0996870:intron | 35.0% | |
| GACACGAAAAACTCATAATC+TGG | + | chr6_4:75620571-75620590 | None:intergenic | 35.0% | |
| ! | ATTATGAGTTTTTCGTGTCG+AGG | - | chr6_4:75620572-75620591 | Msa0996870:intron | 35.0% |
| !!! | TATAGCTCAGTTTTGTTCCT+TGG | - | chr6_4:75620814-75620833 | Msa0996870:intron | 35.0% |
| !!! | AGTTTTGTTCCTTGGTAGAA+AGG | - | chr6_4:75620822-75620841 | Msa0996870:intron | 35.0% |
| TTCCTTGGTAGAAAGGAATA+AGG | - | chr6_4:75620829-75620848 | Msa0996870:five_prime_UTR | 35.0% | |
| TTCCTTATTCCTTTCTACCA+AGG | + | chr6_4:75620834-75620853 | None:intergenic | 35.0% | |
| ! | CTGCTTTGTGTTGTGTTGTT+TGG | + | chr6_4:75613196-75613215 | None:intergenic | 40.0% |
| TCAATCTCAGAATTCAGGCT+TGG | - | chr6_4:75613235-75613254 | Msa0996870:three_prime_UTR | 40.0% | |
| TCAATTCAGTTCCATCCCTT+TGG | - | chr6_4:75613267-75613286 | Msa0996870:three_prime_UTR | 40.0% | |
| TGAGAGAATTTCCAAAGGGA+TGG | + | chr6_4:75613281-75613300 | None:intergenic | 40.0% | |
| ! | TCCCTTTGGAAATTCTCTCA+TGG | - | chr6_4:75613281-75613300 | Msa0996870:three_prime_UTR | 40.0% |
| !! | TCTAAGGCTTAGTGAGGTTT+TGG | - | chr6_4:75613989-75614008 | Msa0996870:intron | 40.0% |
| !! | TTTTGGAGAAACCCAAGTTG+AGG | - | chr6_4:75614068-75614087 | Msa0996870:intron | 40.0% |
| TTCAGGAGAAACCTCAACTT+GGG | + | chr6_4:75614082-75614101 | None:intergenic | 40.0% | |
| TTTCAGGAGAAACCTCAACT+TGG | + | chr6_4:75614083-75614102 | None:intergenic | 40.0% | |
| !! | GGTATGTGCTATTTGCAACT+TGG | - | chr6_4:75614143-75614162 | Msa0996870:intron | 40.0% |
| !! | ATGTGCTATTTGCAACTTGG+TGG | - | chr6_4:75614146-75614165 | Msa0996870:intron | 40.0% |
| !! | TTCAAGGTATTGTGCTGATC+AGG | - | chr6_4:75614317-75614336 | Msa0996870:CDS | 40.0% |
| !! | TCAAGGTATTGTGCTGATCA+GGG | - | chr6_4:75614318-75614337 | Msa0996870:CDS | 40.0% |
| !!! | GAAGCTTACGGTTTTTTGTG+TGG | - | chr6_4:75614490-75614509 | Msa0996870:intron | 40.0% |
| !!! | GGTGTTTTTTCCTCATGTTC+TGG | - | chr6_4:75614531-75614550 | Msa0996870:intron | 40.0% |
| CATGCTAAAACCAGAACATG+AGG | + | chr6_4:75614544-75614563 | None:intergenic | 40.0% | |
| !!! | TCTGGTTTTAGCATGCAACT+CGG | - | chr6_4:75614549-75614568 | Msa0996870:CDS | 40.0% |
| GGCAAAGCCTTTATCAAACA+TGG | + | chr6_4:75614674-75614693 | None:intergenic | 40.0% | |
| !! | TTTCCTGCTTCTGAAACTGT+TGG | + | chr6_4:75615311-75615330 | None:intergenic | 40.0% |
| CAACGATCAACTCTGATAGT+AGG | - | chr6_4:75615518-75615537 | Msa0996870:CDS | 40.0% | |
| GATATATAGCCTGTTTGGGT+TGG | + | chr6_4:75616037-75616056 | None:intergenic | 40.0% | |
| GATAGCAAGAAGAATAGGCA+TGG | + | chr6_4:75616073-75616092 | None:intergenic | 40.0% | |
| !!! | TTCCTTAGTTTTGAGCCTGA+TGG | - | chr6_4:75616369-75616388 | Msa0996870:CDS | 40.0% |
| TTCCATCAGGCTCAAAACTA+AGG | + | chr6_4:75616374-75616393 | None:intergenic | 40.0% | |
| AATCACGTTAACCTAGCTTC+TGG | - | chr6_4:75616429-75616448 | Msa0996870:CDS | 40.0% | |
| GTCTGTTAACAGTTGTTGGA+GGG | + | chr6_4:75616488-75616507 | None:intergenic | 40.0% | |
| TTCGGTCTGTTAACAGTTGT+TGG | + | chr6_4:75616492-75616511 | None:intergenic | 40.0% | |
| ACTTCCTGTGAATTCTTGTG+CGG | - | chr6_4:75616656-75616675 | Msa0996870:CDS | 40.0% | |
| CTGCAGAGATTTATCTTCCT+TGG | + | chr6_4:75616766-75616785 | None:intergenic | 40.0% | |
| AAGAAGCAGTCAAGTGAAAG+CGG | - | chr6_4:75616828-75616847 | Msa0996870:CDS | 40.0% | |
| ACTTACACAGCCATATTCCT+CGG | + | chr6_4:75616877-75616896 | None:intergenic | 40.0% | |
| TCGTCGGAAGATGAAAAATC+TGG | + | chr6_4:75616945-75616964 | None:intergenic | 40.0% | |
| GTGTTGGATTCAGTTTCCAT+TGG | - | chr6_4:75617164-75617183 | Msa0996870:CDS | 40.0% | |
| ! | TCTGGAGTCACTTCAAATTC+AGG | - | chr6_4:75617248-75617267 | Msa0996870:CDS | 40.0% |
| ATGAACATAACGAGGAAACG+CGG | - | chr6_4:75617321-75617340 | Msa0996870:CDS | 40.0% | |
| AGGAAAACAGTCATTCTGTC+TGG | - | chr6_4:75617450-75617469 | Msa0996870:CDS | 40.0% | |
| AACAATTCGAGTGAATGTGG+CGG | - | chr6_4:75617488-75617507 | Msa0996870:CDS | 40.0% | |
| AAGGATCCTGCAACTATTCT+AGG | - | chr6_4:75617702-75617721 | Msa0996870:CDS | 40.0% | |
| ! | ATCCTGCAACTATTCTAGGA+AGG | - | chr6_4:75617706-75617725 | Msa0996870:CDS | 40.0% |
| ! | TCCTGCAACTATTCTAGGAA+GGG | - | chr6_4:75617707-75617726 | Msa0996870:CDS | 40.0% |
| !! | GGAAGGGTTCCAATTTTAAC+AGG | - | chr6_4:75617723-75617742 | Msa0996870:CDS | 40.0% |
| ! | GTAATGGAGATTCAGACCAA+TGG | - | chr6_4:75617833-75617852 | Msa0996870:intron | 40.0% |
| TGTTTCCTGTTCAACTCCAT+TGG | + | chr6_4:75617852-75617871 | None:intergenic | 40.0% | |
| AGTTCACATGAAACAGAGAG+TGG | - | chr6_4:75617926-75617945 | Msa0996870:intron | 40.0% | |
| AATGGACAAAACCACAGTTC+TGG | - | chr6_4:75618064-75618083 | Msa0996870:intron | 40.0% | |
| AACTGGTATCCATTTCCACA+GGG | + | chr6_4:75618098-75618117 | None:intergenic | 40.0% | |
| TGTGGAAATGGATACCAGTT+GGG | - | chr6_4:75618098-75618117 | Msa0996870:intron | 40.0% | |
| TACATCCATTGGTCAAATCG+AGG | - | chr6_4:75618276-75618295 | Msa0996870:intron | 40.0% | |
| ACATCCATTGGTCAAATCGA+GGG | - | chr6_4:75618277-75618296 | Msa0996870:intron | 40.0% | |
| TTGATGTTTGTCCATACGCT+CGG | + | chr6_4:75618344-75618363 | None:intergenic | 40.0% | |
| TTCCTACAGAATAGCTCAAG+CGG | - | chr6_4:75618417-75618436 | Msa0996870:intron | 40.0% | |
| GTGAAACAACCAAGTGAATC+GGG | + | chr6_4:75618559-75618578 | None:intergenic | 40.0% | |
| GGTGAAACAACCAAGTGAAT+CGG | + | chr6_4:75618560-75618579 | None:intergenic | 40.0% | |
| TATGAGAAACATGGGAGCTA+TGG | - | chr6_4:75618661-75618680 | Msa0996870:intron | 40.0% | |
| !! | GGAGCTATGGATTAGAGATA+AGG | - | chr6_4:75618674-75618693 | Msa0996870:intron | 40.0% |
| AAGAAGGGACAAAATAGGCA+CGG | + | chr6_4:75618753-75618772 | None:intergenic | 40.0% | |
| GCTGAACTGCTGATAAAGAA+GGG | + | chr6_4:75618768-75618787 | None:intergenic | 40.0% | |
| AGCTGAACTGCTGATAAAGA+AGG | + | chr6_4:75618769-75618788 | None:intergenic | 40.0% | |
| !! | TGAGTCAGTAGATGGATTAG+AGG | + | chr6_4:75618914-75618933 | None:intergenic | 40.0% |
| !! | AAGTTCTGAATCACCAGAAC+AGG | + | chr6_4:75618938-75618957 | None:intergenic | 40.0% |
| TATAGAGGTCGTCTTTGTTG+AGG | + | chr6_4:75618988-75619007 | None:intergenic | 40.0% | |
| TTCATCTTCTCACAGGATAC+AGG | - | chr6_4:75619474-75619493 | Msa0996870:intron | 40.0% | |
| AACTGGAGTCTATAAGCTTG+CGG | - | chr6_4:75619551-75619570 | Msa0996870:intron | 40.0% | |
| ! | TTTAAGACCACCTGATTTGC+AGG | - | chr6_4:75619722-75619741 | Msa0996870:intron | 40.0% |
| CCATCTGGTATACGGTAAAT+AGG | + | chr6_4:75619766-75619785 | None:intergenic | 40.0% | |
| CCTATTTACCGTATACCAGA+TGG | - | chr6_4:75619763-75619782 | Msa0996870:intron | 40.0% | |
| GAAAGTTGCCATCTGGTATA+CGG | + | chr6_4:75619774-75619793 | None:intergenic | 40.0% | |
| TTTCCATTCACTTGGGCATT+TGG | - | chr6_4:75619810-75619829 | Msa0996870:intron | 40.0% | |
| AAACCAAATGCCCAAGTGAA+TGG | + | chr6_4:75619816-75619835 | None:intergenic | 40.0% | |
| ACTACACAAGAATCCAGAGT+CGG | + | chr6_4:75619862-75619881 | None:intergenic | 40.0% | |
| CCTGTGCATTGTAACTTTGA+AGG | + | chr6_4:75619900-75619919 | None:intergenic | 40.0% | |
| CCTTCAAAGTTACAATGCAC+AGG | - | chr6_4:75619897-75619916 | Msa0996870:intron | 40.0% | |
| TCAACTTCTTTCTCACATCC+TGG | - | chr6_4:75619936-75619955 | Msa0996870:intron | 40.0% | |
| TGTTGACATAAGCACTTGTG+AGG | - | chr6_4:75620181-75620200 | Msa0996870:intron | 40.0% | |
| GAGCTATCTTGGAGATTGTA+TGG | + | chr6_4:75620271-75620290 | None:intergenic | 40.0% | |
| TTCAGCTGAATCAAACTGCA+CGG | - | chr6_4:75620416-75620435 | Msa0996870:intron | 40.0% | |
| ! | GCTCTTTAAGAAAAACCGAG+GGG | + | chr6_4:75620465-75620484 | None:intergenic | 40.0% |
| ! | CGCTCTTTAAGAAAAACCGA+GGG | + | chr6_4:75620466-75620485 | None:intergenic | 40.0% |
| ! | ACGCTCTTTAAGAAAAACCG+AGG | + | chr6_4:75620467-75620486 | None:intergenic | 40.0% |
| GATGTCTGTTTGTGCAGATT+TGG | + | chr6_4:75620549-75620568 | None:intergenic | 40.0% | |
| ATGAAAGCCGAGAAATTCGG+AGG | - | chr6_4:75614121-75614140 | Msa0996870:intron | 45.0% | |
| TGAAAGCCGAGAAATTCGGA+GGG | - | chr6_4:75614122-75614141 | Msa0996870:intron | 45.0% | |
| CACATACCCTCCGAATTTCT+CGG | + | chr6_4:75614131-75614150 | None:intergenic | 45.0% | |
| !!! | TTTTGGCCAATGGTACTGAC+AGG | - | chr6_4:75615241-75615260 | Msa0996870:CDS | 45.0% |
| AGTCCAACAGTTTCAGAAGC+AGG | - | chr6_4:75615305-75615324 | Msa0996870:CDS | 45.0% | |
| ! | GCTTGTTGGAGCTTATCTAC+TGG | + | chr6_4:75616015-75616034 | None:intergenic | 45.0% |
| AGAATTCTCCAGGTTCCATC+AGG | + | chr6_4:75616387-75616406 | None:intergenic | 45.0% | |
| ATTGAGACACTGCACTGGAA+CGG | + | chr6_4:75616412-75616431 | None:intergenic | 45.0% | |
| TACTTATGCTGCCAGAAGCT+AGG | + | chr6_4:75616443-75616462 | None:intergenic | 45.0% | |
| AGCTTCTGGCAGCATAAGTA+TGG | - | chr6_4:75616443-75616462 | Msa0996870:CDS | 45.0% | |
| TCTGGCAGCATAAGTATGGA+TGG | - | chr6_4:75616447-75616466 | Msa0996870:CDS | 45.0% | |
| GGTCTGTTAACAGTTGTTGG+AGG | + | chr6_4:75616489-75616508 | None:intergenic | 45.0% | |
| TAGCTGAATAAGCACTCGGA+GGG | + | chr6_4:75616548-75616567 | None:intergenic | 45.0% | |
| TTAGCTGAATAAGCACTCGG+AGG | + | chr6_4:75616549-75616568 | None:intergenic | 45.0% | |
| CTTCCTGTGAATTCTTGTGC+GGG | - | chr6_4:75616657-75616676 | Msa0996870:CDS | 45.0% | |
| GAATTCTTGTGCGGGAAGTT+CGG | - | chr6_4:75616665-75616684 | Msa0996870:CDS | 45.0% | |
| ! | AACTTTGAGGGGACAAGCTA+GGG | + | chr6_4:75616704-75616723 | None:intergenic | 45.0% |
| TGAAAGAGAACTTCGTACCG+AGG | - | chr6_4:75616857-75616876 | Msa0996870:CDS | 45.0% | |
| GAACTTCGTACCGAGGAATA+TGG | - | chr6_4:75616864-75616883 | Msa0996870:CDS | 45.0% | |
| TCGTTCAACAAGGCAAGTTC+TGG | - | chr6_4:75617230-75617249 | Msa0996870:CDS | 45.0% | |
| CTTGGTCAAGGCTTAACAAC+AGG | - | chr6_4:75617284-75617303 | Msa0996870:CDS | 45.0% | |
| CAGTCATTCTGTCTGGCAAA+AGG | - | chr6_4:75617457-75617476 | Msa0996870:CDS | 45.0% | |
| !! | GAATGTTGTTTCAGGACCTG+AGG | - | chr6_4:75617613-75617632 | Msa0996870:CDS | 45.0% |
| ACCCTTCCTAGAATAGTTGC+AGG | + | chr6_4:75617711-75617730 | None:intergenic | 45.0% | |
| TCAGACCAATGGAGTTGAAC+AGG | - | chr6_4:75617844-75617863 | Msa0996870:intron | 45.0% | |
| CAACTGGTATCCATTTCCAC+AGG | + | chr6_4:75618099-75618118 | None:intergenic | 45.0% | |
| CTGTGGAAATGGATACCAGT+TGG | - | chr6_4:75618097-75618116 | Msa0996870:intron | 45.0% | |
| ! | AGACTCAGATTTTGCCGTTC+CGG | + | chr6_4:75618134-75618153 | None:intergenic | 45.0% |
| ! | TTCACCCTCGATTTGACCAA+TGG | + | chr6_4:75618284-75618303 | None:intergenic | 45.0% |
| AAACTAGGTGAGGAGATTGC+AGG | - | chr6_4:75618310-75618329 | Msa0996870:intron | 45.0% | |
| ACAAGCTAATTGAACTCGGC+AGG | + | chr6_4:75618452-75618471 | None:intergenic | 45.0% | |
| TCGGGTGATCGACAAATAAC+AGG | + | chr6_4:75618541-75618560 | None:intergenic | 45.0% | |
| ACAGTGGGACACCAATCAAA+TGG | + | chr6_4:75618594-75618613 | None:intergenic | 45.0% | |
| GTATCTCATGTCTGCACAGT+GGG | + | chr6_4:75618609-75618628 | None:intergenic | 45.0% | |
| AAGCACCCCAAAGATACTTC+AGG | + | chr6_4:75618631-75618650 | None:intergenic | 45.0% | |
| !! | AAGTATCTTTGGGGTGCTTG+TGG | - | chr6_4:75618632-75618651 | Msa0996870:intron | 45.0% |
| !! | AGTATCTTTGGGGTGCTTGT+GGG | - | chr6_4:75618633-75618652 | Msa0996870:intron | 45.0% |
| TGGGAGTGGTATGAGAAACA+TGG | - | chr6_4:75618652-75618671 | Msa0996870:intron | 45.0% | |
| GGGAGTGGTATGAGAAACAT+GGG | - | chr6_4:75618653-75618672 | Msa0996870:intron | 45.0% | |
| GAAGATCCGAAGACATTAGG+AGG | - | chr6_4:75618709-75618728 | Msa0996870:intron | 45.0% | |
| CCAACACCTCCTAATGTCTT+CGG | + | chr6_4:75618718-75618737 | None:intergenic | 45.0% | |
| !! | TGTTCGCACATCGACTTTCA+CGG | + | chr6_4:75618801-75618820 | None:intergenic | 45.0% |
| ! | GAACAGGTTGAGTCAGTAGA+TGG | + | chr6_4:75618922-75618941 | None:intergenic | 45.0% |
| !! | TCTACTGACTCAACCTGTTC+TGG | - | chr6_4:75618922-75618941 | Msa0996870:intron | 45.0% |
| CTATTCTCCTGAGAACAGGA+GGG | + | chr6_4:75619286-75619305 | None:intergenic | 45.0% | |
| CTCCTGTTCTCAGGAGAATA+GGG | - | chr6_4:75619285-75619304 | Msa0996870:intron | 45.0% | |
| TTATGGGGACGCAACTAAAC+TGG | - | chr6_4:75619534-75619553 | Msa0996870:intron | 45.0% | |
| ACTGGAGTCTATAAGCTTGC+GGG | - | chr6_4:75619552-75619571 | Msa0996870:intron | 45.0% | |
| GGGATCTTCATCCTAGATCT+TGG | - | chr6_4:75619572-75619591 | Msa0996870:intron | 45.0% | |
| !! | AAATTCTGATTCGCCGACTC+TGG | - | chr6_4:75619846-75619865 | Msa0996870:intron | 45.0% |
| TGTGTAGTTTCTCCAGCTGT+AGG | - | chr6_4:75619874-75619893 | Msa0996870:intron | 45.0% | |
| ! | TAACTTTGAAGGCCTACAGC+TGG | + | chr6_4:75619889-75619908 | None:intergenic | 45.0% |
| GTTCATCTTCTCAGAAAGCC+AGG | + | chr6_4:75619957-75619976 | None:intergenic | 45.0% | |
| ACTGTGTGCTTGAGGGATAT+AGG | - | chr6_4:75620040-75620059 | Msa0996870:intron | 45.0% | |
| AATGCTAGGCATAAACCCCT+CGG | - | chr6_4:75620447-75620466 | Msa0996870:intron | 45.0% | |
| GCAAGAGCTGATGTCAACAA+GGG | - | chr6_4:75620520-75620539 | Msa0996870:intron | 45.0% | |
| CAAGAGCTGATGTCAACAAG+GGG | - | chr6_4:75620521-75620540 | Msa0996870:intron | 45.0% | |
| TCCTTGCCTGTCAGTACCAT+TGG | + | chr6_4:75615250-75615269 | None:intergenic | 50.0% | |
| TCCAACAAGCCAACCCAAAC+AGG | - | chr6_4:75616025-75616044 | Msa0996870:CDS | 50.0% | |
| !! | GTTTTGAGCCTGATGGAACC+TGG | - | chr6_4:75616376-75616395 | Msa0996870:CDS | 50.0% |
| TGGAACGGCAAGAATTCTCC+AGG | + | chr6_4:75616397-75616416 | None:intergenic | 50.0% | |
| ACGTGATTGAGACACTGCAC+TGG | + | chr6_4:75616417-75616436 | None:intergenic | 50.0% | |
| GATCAATGTAAGGGGCCTAG+AGG | - | chr6_4:75616516-75616535 | Msa0996870:CDS | 50.0% | |
| CTTCCCGCACAAGAATTCAC+AGG | + | chr6_4:75616663-75616682 | None:intergenic | 50.0% | |
| ! | GAACTTTGAGGGGACAAGCT+AGG | + | chr6_4:75616705-75616724 | None:intergenic | 50.0% |
| TACCGGCGACAGAACTTTGA+GGG | + | chr6_4:75616716-75616735 | None:intergenic | 50.0% | |
| ATACCGGCGACAGAACTTTG+AGG | + | chr6_4:75616717-75616736 | None:intergenic | 50.0% | |
| AACCTGCAGCAGCAATGATG+TGG | - | chr6_4:75616908-75616927 | Msa0996870:CDS | 50.0% | |
| ATCCACATCATTGCTGCTGC+AGG | + | chr6_4:75616913-75616932 | None:intergenic | 50.0% | |
| ! | CTGCGACTCTTGTATCGATG+AGG | - | chr6_4:75617037-75617056 | Msa0996870:CDS | 50.0% |
| !!! | TTTTCGGGTGTTGGTCGAAC+AGG | - | chr6_4:75617425-75617444 | Msa0996870:CDS | 50.0% |
| !! | TTTCGGGTGTTGGTCGAACA+GGG | - | chr6_4:75617426-75617445 | Msa0996870:CDS | 50.0% |
| AATTCGAGTGAATGTGGCGG+TGG | - | chr6_4:75617491-75617510 | Msa0996870:CDS | 50.0% | |
| !! | GTTGGCGCGAATGTTGTTTC+AGG | - | chr6_4:75617605-75617624 | Msa0996870:CDS | 50.0% |
| TATCGACCTGGAAAACGGAC+TGG | - | chr6_4:75618198-75618217 | Msa0996870:intron | 50.0% | |
| ! | TTGGTTCCAGTCCGTTTTCC+AGG | + | chr6_4:75618207-75618226 | None:intergenic | 50.0% |
| AGGTTCATTGACCGAGCGTA+TGG | - | chr6_4:75618330-75618349 | Msa0996870:intron | 50.0% | |
| CACCGCTTGAGCTATTCTGT+AGG | + | chr6_4:75618422-75618441 | None:intergenic | 50.0% | |
| AGCTTGTGAAGTAGTGCGCA+AGG | - | chr6_4:75618465-75618484 | Msa0996870:intron | 50.0% | |
| TGTCGATCACCCGATTCACT+TGG | - | chr6_4:75618547-75618566 | Msa0996870:intron | 50.0% | |
| GGTATCTCATGTCTGCACAG+TGG | + | chr6_4:75618610-75618629 | None:intergenic | 50.0% | |
| ! | CCGAAGACATTAGGAGGTGT+TGG | - | chr6_4:75618715-75618734 | Msa0996870:intron | 50.0% |
| GGGACAAAATAGGCACGGAA+CGG | + | chr6_4:75618748-75618767 | None:intergenic | 50.0% | |
| GTCTTAACCCTCCTGTTCTC+AGG | - | chr6_4:75619276-75619295 | Msa0996870:intron | 50.0% | |
| CCTATTCTCCTGAGAACAGG+AGG | + | chr6_4:75619287-75619306 | None:intergenic | 50.0% | |
| CCTCCTGTTCTCAGGAGAAT+AGG | - | chr6_4:75619284-75619303 | Msa0996870:intron | 50.0% | |
| AGAATAGGGCCCCAGTAATC+CGG | - | chr6_4:75619299-75619318 | Msa0996870:intron | 50.0% | |
| TTCGAATCATGGCCGAACTC+CGG | + | chr6_4:75619321-75619340 | None:intergenic | 50.0% | |
| GAGAACCAGCGTTCGAATCA+TGG | + | chr6_4:75619332-75619351 | None:intergenic | 50.0% | |
| ! | CTGCTGACTGACTTTCACAC+AGG | + | chr6_4:75619437-75619456 | None:intergenic | 50.0% |
| CTGTGTGAAAGTCAGTCAGC+AGG | - | chr6_4:75619435-75619454 | Msa0996870:intron | 50.0% | |
| TTCTCACAGGATACAGGAGC+TGG | - | chr6_4:75619480-75619499 | Msa0996870:intron | 50.0% | |
| AGGATACAGGAGCTGGTTAG+AGG | - | chr6_4:75619487-75619506 | Msa0996870:intron | 50.0% | |
| ! | CGTCCCCATAAGTTTTCGAC+TGG | + | chr6_4:75619525-75619544 | None:intergenic | 50.0% |
| ! | CCACCTGATTTGCAGGTACT+CGG | - | chr6_4:75619729-75619748 | Msa0996870:intron | 50.0% |
| CAACCGAGTACCTGCAAATC+AGG | + | chr6_4:75619735-75619754 | None:intergenic | 50.0% | |
| TTTGCAGGTACTCGGTTGCA+TGG | - | chr6_4:75619737-75619756 | Msa0996870:intron | 50.0% | |
| TAGAGGCTACTGTGTGCTTG+AGG | - | chr6_4:75620032-75620051 | Msa0996870:intron | 50.0% | |
| AGAGGCTACTGTGTGCTTGA+GGG | - | chr6_4:75620033-75620052 | Msa0996870:intron | 50.0% | |
| GCTATGAACAGGGTGAATGC+TGG | - | chr6_4:75620392-75620411 | Msa0996870:intron | 50.0% | |
| GCACGGAGAACAGAAATGCT+AGG | - | chr6_4:75620433-75620452 | Msa0996870:intron | 50.0% | |
| GGCAAGAGCTGATGTCAACA+AGG | - | chr6_4:75620519-75620538 | Msa0996870:intron | 50.0% | |
| ! | AGTTTTTCGTGTCGAGGCGA+CGG | - | chr6_4:75620578-75620597 | Msa0996870:intron | 50.0% |
| !! | GCCAATGGTACTGACAGGCA+AGG | - | chr6_4:75615246-75615265 | Msa0996870:CDS | 55.0% |
| CAGGCAAGGAAGATGCGTTG+TGG | - | chr6_4:75615260-75615279 | Msa0996870:CDS | 55.0% | |
| CGTTGTGGCCCTCAGACAAA+AGG | - | chr6_4:75615275-75615294 | Msa0996870:CDS | 55.0% | |
| !! | GCCTGTTTGGGTTGGCTTGT+TGG | + | chr6_4:75616029-75616048 | None:intergenic | 55.0% |
| ATGTAAGGGGCCTAGAGGAC+AGG | - | chr6_4:75616521-75616540 | Msa0996870:CDS | 55.0% | |
| TCCCCTCAAAGTTCTGTCGC+CGG | - | chr6_4:75616711-75616730 | Msa0996870:CDS | 55.0% | |
| ACCGGCGACAGAACTTTGAG+GGG | + | chr6_4:75616715-75616734 | None:intergenic | 55.0% | |
| AACGAGGAAACGCGGAACAG+TGG | - | chr6_4:75617329-75617348 | Msa0996870:CDS | 55.0% | |
| GCTCTACAGCCCTGTGGAAA+TGG | - | chr6_4:75618086-75618105 | Msa0996870:intron | 55.0% | |
| GAAGTAGTGCGCAAGGTGAC+TGG | - | chr6_4:75618472-75618491 | Msa0996870:intron | 55.0% | |
| GGCCCTATTCTCCTGAGAAC+AGG | + | chr6_4:75619290-75619309 | None:intergenic | 55.0% | |
| TGGCCGAACTCCGGATTACT+GGG | + | chr6_4:75619312-75619331 | None:intergenic | 55.0% | |
| ATGGCCGAACTCCGGATTAC+TGG | + | chr6_4:75619313-75619332 | None:intergenic | 55.0% | |
| TTCGGCCATGATTCGAACGC+TGG | - | chr6_4:75619324-75619343 | Msa0996870:intron | 55.0% | |
| CCGAGTACCTGCAAATCAGG+TGG | + | chr6_4:75619732-75619751 | None:intergenic | 55.0% | |
| GATGCGCGAAAGTTGCCATC+TGG | + | chr6_4:75619781-75619800 | None:intergenic | 55.0% | |
| !! | GGGTGTTGGTCGAACAGGGA+AGG | - | chr6_4:75617430-75617449 | Msa0996870:CDS | 60.0% |
| GGGCTGTAGAGCCAGAACTG+TGG | + | chr6_4:75618078-75618097 | None:intergenic | 60.0% | |
| !! | GTTCTGGCTCTACAGCCCTG+TGG | - | chr6_4:75618080-75618099 | Msa0996870:intron | 60.0% |
| GTAGTGCGCAAGGTGACTGG+TGG | - | chr6_4:75618475-75618494 | Msa0996870:intron | 60.0% | |
| !! | CTTTGGGGTGCTTGTGGGAG+TGG | - | chr6_4:75618638-75618657 | Msa0996870:intron | 60.0% |
| GGCCCCAGTAATCCGGAGTT+CGG | - | chr6_4:75619306-75619325 | Msa0996870:intron | 60.0% | |
| GGCCGAACTCCGGATTACTG+GGG | + | chr6_4:75619311-75619330 | None:intergenic | 60.0% | |
| CTCGGAGGGACCTGTCCTCT+AGG | + | chr6_4:75616534-75616553 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 75613123 | 75621002 | 75613123 | ID=Msa0996870;Name=Msa0996870 |
| chr6_4 | mRNA | 75613123 | 75621002 | 75613123 | ID=Msa0996870-mRNA-1;Parent=Msa0996870;Name=Msa0996870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=177|0.71|0.75|0.87|0.85|0.87|8|396|1102 |
| chr6_4 | exon | 75613123 | 75613722 | 75613123 | ID=Msa0996870-mRNA-1:exon:14183;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75614207 | 75614381 | 75614207 | ID=Msa0996870-mRNA-1:exon:14182;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75614532 | 75614636 | 75614532 | ID=Msa0996870-mRNA-1:exon:14181;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75614813 | 75614870 | 75614813 | ID=Msa0996870-mRNA-1:exon:14180;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75615182 | 75617772 | 75615182 | ID=Msa0996870-mRNA-1:exon:14179;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75618586 | 75618629 | 75618586 | ID=Msa0996870-mRNA-1:exon:14178;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75618734 | 75618862 | 75618734 | ID=Msa0996870-mRNA-1:exon:14177;Parent=Msa0996870-mRNA-1 |
| chr6_4 | exon | 75620823 | 75621002 | 75620823 | ID=Msa0996870-mRNA-1:exon:14176;Parent=Msa0996870-mRNA-1 |
| chr6_4 | five_prime_UTR | 75620826 | 75621002 | 75620826 | ID=Msa0996870-mRNA-1:five_prime_utr;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75620823 | 75620825 | 75620823 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75618734 | 75618862 | 75618734 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75618586 | 75618629 | 75618586 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75615182 | 75617772 | 75615182 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75614813 | 75614870 | 75614813 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75614532 | 75614636 | 75614532 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75614207 | 75614381 | 75614207 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | CDS | 75613519 | 75613722 | 75613519 | ID=Msa0996870-mRNA-1:cds;Parent=Msa0996870-mRNA-1 |
| chr6_4 | three_prime_UTR | 75613123 | 75613518 | 75613123 | ID=Msa0996870-mRNA-1:three_prime_utr;Parent=Msa0996870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
