AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085200 MtrunA17_Chr3g0111661 97.969 640 13 0 1 640 1 640 0.0 1290
Msa1085200 MtrunA17_Chr5g0435301 64.319 653 214 6 5 640 472 1122 0.0 832
Msa1085200 MtrunA17_Chr5g0435301 57.407 108 45 1 4 110 231 338 1.59e-30 128
Msa1085200 MtrunA17_Chr5g0435301 50.000 138 52 4 1 127 117 248 1.60e-29 125
Msa1085200 MtrunA17_Chr5g0435301 52.542 118 53 2 2 116 350 467 3.03e-29 124
Msa1085200 MtrunA17_Chr5g0435301 55.963 109 46 2 1 108 1 108 3.76e-28 120
Msa1085200 MtrunA17_Chr4g0001231 42.926 622 328 10 22 637 22 622 7.50e-162 478
Msa1085200 MtrunA17_Chr4g0074301 42.173 626 337 8 19 637 19 626 3.19e-160 474
Msa1085200 MtrunA17_Chr4g0070931 42.357 628 333 9 19 637 19 626 2.65e-158 469
Msa1085200 MtrunA17_Chr2g0328251 37.861 692 350 14 13 636 10 689 4.29e-135 411
Msa1085200 MtrunA17_Chr2g0328241 39.510 653 333 11 34 636 33 673 7.90e-129 395
Msa1085200 MtrunA17_Chr4g0024031 34.925 670 332 13 34 636 33 665 6.96e-113 353
Msa1085200 MtrunA17_Chr2g0327251 38.645 546 265 8 110 636 69 563 1.34e-104 328
Msa1085200 MtrunA17_Chr3g0111741 58.879 214 87 1 425 637 123 336 2.64e-72 237
Msa1085200 MtrunA17_Chr4g0071151 50.579 259 97 4 398 637 3 249 3.97e-71 230
Msa1085200 MtrunA17_Chr2g0328231 38.220 382 172 7 282 632 9 357 4.35e-63 213
Msa1085200 MtrunA17_Chr3g0111731 54.464 224 87 3 417 637 1 212 2.89e-62 206
Msa1085200 MtrunA17_Chr4g0074271 34.646 381 214 5 19 398 36 382 3.20e-59 205
Msa1085200 MtrunA17_Chr4g0074271 48.529 68 35 0 563 630 381 448 2.96e-14 75.5
Msa1085200 MtrunA17_Chr3g0111691 55.556 72 32 0 566 637 17 88 7.24e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085200 AT3G48670.2 55.732 628 272 3 16 639 21 646 0.0 704
Msa1085200 AT3G48670.1 55.732 628 272 3 16 639 21 646 0.0 704
Msa1085200 AT3G48670.3 55.732 628 272 3 16 639 21 646 0.0 704
Msa1085200 AT3G12550.5 50.786 636 297 7 13 636 2 633 0.0 624
Msa1085200 AT3G12550.4 50.706 637 297 7 13 636 2 634 0.0 624
Msa1085200 AT3G12550.2 50.706 637 297 7 13 636 2 634 0.0 624
Msa1085200 AT3G12550.1 50.706 637 297 7 13 636 2 634 0.0 624
Msa1085200 AT3G12550.3 49.647 566 270 6 13 567 2 563 0.0 542
Msa1085200 AT1G15910.1 39.641 613 361 7 18 628 17 622 8.93e-144 432
Msa1085200 AT4G00380.1 40.033 612 359 6 19 628 18 623 8.46e-143 429
Msa1085200 AT4G00380.3 40.033 612 359 6 19 628 18 623 8.46e-143 429
Msa1085200 AT1G13790.2 41.822 538 294 5 99 632 204 726 1.35e-136 417
Msa1085200 AT1G13790.2 46.341 82 43 1 12 93 3 83 1.13e-14 78.2
Msa1085200 AT1G13790.1 41.822 538 294 5 99 632 204 726 1.35e-136 417
Msa1085200 AT1G13790.1 46.341 82 43 1 12 93 3 83 1.13e-14 78.2
Msa1085200 AT4G00380.2 37.908 612 344 6 19 628 18 595 4.21e-132 401
Msa1085200 AT1G80790.1 39.739 614 356 11 19 628 19 622 3.24e-130 397
Msa1085200 AT1G80790.2 39.739 614 356 11 19 628 19 622 3.24e-130 397
Msa1085200 AT5G59390.2 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa1085200 AT5G59390.4 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa1085200 AT5G59390.3 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa1085200 AT5G59390.1 38.336 553 319 7 89 629 1 543 9.89e-124 378
Msa1085200 AT5G59390.5 38.336 553 319 7 89 629 1 543 9.89e-124 378
Msa1085200 AT4G01780.1 41.860 516 172 7 128 639 80 471 2.51e-120 366
Msa1085200 AT4G01180.1 37.338 541 300 8 108 629 18 538 1.43e-113 352
Msa1085200 AT1G80790.3 37.037 459 277 9 19 475 19 467 1.21e-83 271
Msa1085200 AT3G29375.3 40.704 199 109 3 442 636 33 226 1.99e-37 139
Msa1085200 AT3G29375.1 41.206 199 108 3 442 636 156 349 4.80e-36 139
Msa1085200 AT3G29375.2 39.316 117 65 2 442 557 33 144 1.09e-15 75.9

Find 159 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTTTAGTGAAATATT+TGG 0.147850 7_2:-85663033 Msa1085200:CDS
CTCAATAATGTTGGTCAAAT+TGG 0.163099 7_2:+85662488 None:intergenic
GATGAGGTTCTCAAAATATT+AGG 0.182802 7_2:+85664553 None:intergenic
CACAAGATGGGCGTGCTGTT+GGG 0.229647 7_2:-85662866 Msa1085200:CDS
GAACTCCTGCAACATGCTTC+TGG 0.241965 7_2:-85663107 Msa1085200:CDS
GGGCTAGTGGTTCCAAGCTT+AGG 0.267461 7_2:-85662845 Msa1085200:CDS
TGTCATAGCAGAATTCATTT+TGG 0.267704 7_2:+85662413 None:intergenic
CACAGAGGATTGACTCGATA+TGG 0.273116 7_2:+85662795 None:intergenic
GGTTTGCAGCTCTACAAATA+TGG 0.283988 7_2:+85657082 None:intergenic
CTCTCTTCAGATGGCTTCTC+TGG 0.291092 7_2:-85660765 Msa1085200:CDS
ACTTTGAATGGATGCCAATC+TGG 0.306475 7_2:+85659663 None:intergenic
AATTGGAAGTAGAAGGAAAA+TGG 0.320820 7_2:+85664465 None:intergenic
CCATTCTCTTCACACCAATA+TGG 0.337100 7_2:+85659799 None:intergenic
ATGAGGTTCTCAAAATATTA+GGG 0.340733 7_2:+85664554 None:intergenic
ATCAGACCATCACGGGAAAA+AGG 0.341544 7_2:-85662679 Msa1085200:CDS
CTGGAGATTCAGCAACTAAA+AGG 0.346899 7_2:-85660519 Msa1085200:CDS
ATGAGCAGTTTGTTTGGCCT+TGG 0.350970 7_2:-85662923 Msa1085200:CDS
TTGTATTTCAGGTGGTATAA+AGG 0.352840 7_2:-85663316 Msa1085200:intron
AACTCCTGCAACATGCTTCT+GGG 0.355105 7_2:-85663106 Msa1085200:CDS
AATTTATGATCATGTTAAAC+TGG 0.362350 7_2:-85657031 Msa1085200:three_prime_UTR
GCTTGTTCTTCCTGAAGTTC+AGG 0.365310 7_2:+85662534 None:intergenic
CAAAACCATACCTGAACTTC+AGG 0.366653 7_2:-85662544 Msa1085200:CDS
GCACAAGATGGGCGTGCTGT+TGG 0.374639 7_2:-85662867 Msa1085200:CDS
GAAGGTAGATGATTTGCATA+TGG 0.376492 7_2:-85660442 Msa1085200:CDS
AGATATAAATGTTATGAAAC+TGG 0.377193 7_2:-85660729 Msa1085200:CDS
GGCTAGTGGTTCCAAGCTTA+GGG 0.377913 7_2:-85662844 Msa1085200:CDS
AAGAGAAAAGGCTACTCATT+TGG 0.397330 7_2:-85663051 Msa1085200:CDS
CCACCCCAGAAGCATGTTGC+AGG 0.399060 7_2:+85663102 None:intergenic
TGATTTGCATATGGGTTTGA+GGG 0.400254 7_2:-85660433 Msa1085200:CDS
GCTCCTTGATGATTAGTGTT+TGG 0.402887 7_2:+85660373 None:intergenic
ATTCTGATGAGCAGTTTGTT+TGG 0.414097 7_2:-85662929 Msa1085200:CDS
GCTCTCTAAGAAGAGAGTTT+AGG 0.420490 7_2:+85664515 None:intergenic
TTCAAAGTTGTCATGATTGA+AGG 0.425294 7_2:-85659648 Msa1085200:CDS
TGCCGTGGTGGCATCTTTAA+CGG 0.426193 7_2:-85658331 Msa1085200:CDS
ATGATTTGCATATGGGTTTG+AGG 0.426345 7_2:-85660434 Msa1085200:CDS
TTGTAGGGCATTAAAGATAT+AGG 0.427673 7_2:-85659831 Msa1085200:intron
TCAATCATGACAACTTTGAA+TGG 0.430213 7_2:+85659651 None:intergenic
TAGTTAATATTCCCACTAGC+AGG 0.431817 7_2:-85662890 Msa1085200:CDS
GAAGAGAAAGCCAAGAGAAA+AGG 0.432830 7_2:-85663063 Msa1085200:CDS
CATTCAGCTTGAAAGACAAC+TGG 0.434076 7_2:-85660562 Msa1085200:CDS
ACAAGATGGGCGTGCTGTTG+GGG 0.435201 7_2:-85662865 Msa1085200:CDS
CGAAAAGCTTAAGTCGCAAC+TGG 0.436034 7_2:-85661870 Msa1085200:CDS
CAGTTTGTTTGGCCTTGGAT+TGG 0.436617 7_2:-85662918 Msa1085200:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.437782 7_2:-85663027 Msa1085200:CDS
CTCTCTTCTTAGAGAGCGTT+AGG 0.440038 7_2:-85664509 Msa1085200:five_prime_UTR
TTATGCACAACCTTAATCTT+CGG 0.440589 7_2:+85657061 None:intergenic
TATGAAACAAAAGCTGGAAC+TGG 0.443041 7_2:-85660538 Msa1085200:CDS
CATATTGGTGTGAAGAGAAT+GGG 0.444902 7_2:-85659798 Msa1085200:CDS
AAGAAAGTTGCTAGAAGAGA+TGG 0.445164 7_2:-85661774 Msa1085200:CDS
GATATGTAACCTCAGAGTTA+TGG 0.447168 7_2:-85658281 Msa1085200:CDS
CATTCCCCTAGTGTTGTTTG+TGG 0.454225 7_2:-85664659 None:intergenic
GAGCTGCAAACCGAAGATTA+AGG 0.454519 7_2:-85657071 Msa1085200:three_prime_UTR
AAGGTAGATGATTTGCATAT+GGG 0.455418 7_2:-85660441 Msa1085200:CDS
CTGCAACATGCTTCTGGGGT+GGG 0.458226 7_2:-85663101 Msa1085200:CDS
TTCTTCCTGAAGTTCAGGTA+TGG 0.459017 7_2:+85662539 None:intergenic
CCCATCTTGTGCCCTGCTAG+TGG 0.460385 7_2:+85662878 None:intergenic
AATAATTTGTGCATGGCGGC+TGG 0.461442 7_2:-85657116 Msa1085200:three_prime_UTR
TTCAGAACTATGTTCATTGT+GGG 0.462202 7_2:-85659703 Msa1085200:CDS
CCATATTGGTGTGAAGAGAA+TGG 0.462918 7_2:-85659799 Msa1085200:CDS
TGGTGAATATCTGCGAAAGA+TGG 0.472008 7_2:-85662574 Msa1085200:CDS
CAATTTGACCAACATTATTG+AGG 0.472553 7_2:-85662487 Msa1085200:CDS
AAGTAGAAGGAAAATGGATC+TGG 0.472707 7_2:+85664471 None:intergenic
GGGCGTGCTGTTGGGGCTAG+TGG 0.472779 7_2:-85662858 Msa1085200:CDS
CCTTTGTATTATCTCTAGCA+TGG 0.473959 7_2:-85656952 Msa1085200:three_prime_UTR
TGCAAGTGCATTATCTAAGC+CGG 0.475800 7_2:+85662719 None:intergenic
CGAAGTCGGGTCTTTATGCA+TGG 0.478600 7_2:-85662635 Msa1085200:CDS
CTCATTCAAGCTTATAATGA+AGG 0.478873 7_2:-85662378 Msa1085200:intron
AGTATCTAAAAGACCCAGAT+TGG 0.483392 7_2:-85659677 Msa1085200:CDS
GTTAATACAGAGCCGAAGTC+GGG 0.485220 7_2:-85662648 Msa1085200:CDS
GTTGCTAGAAGAGATGGAGG+AGG 0.492303 7_2:-85661768 Msa1085200:intron
CTGTCCTAAGAAAAGAAAAC+GGG 0.493609 7_2:-85663144 Msa1085200:CDS
CCTGCAACATGCTTCTGGGG+TGG 0.494090 7_2:-85663102 Msa1085200:CDS
AAAGTTGCTAGAAGAGATGG+AGG 0.496394 7_2:-85661771 Msa1085200:CDS
ACTGTCCTAAGAAAAGAAAA+CGG 0.497895 7_2:-85663145 Msa1085200:CDS
CCGTTATCAGTTGGTTCCGA+TGG 0.498274 7_2:+85662984 None:intergenic
TGTTATGAAGAACTGAAAAG+TGG 0.504332 7_2:-85663212 Msa1085200:CDS
CTTCAGAACTATGTTCATTG+TGG 0.507293 7_2:-85659704 Msa1085200:CDS
CTTTGAATGGATGCCAATCT+GGG 0.508070 7_2:+85659664 None:intergenic
GAGAAAAGAAGTGGGTGAAA+AGG 0.509744 7_2:-85658361 Msa1085200:CDS
TTCTGAGATAAGTGAGTATG+AGG 0.511412 7_2:-85663240 Msa1085200:CDS
TTCTTCATAGCTTCAAGGAA+CGG 0.513496 7_2:+85659759 None:intergenic
CATGATTGAAGGGAAAGAAA+AGG 0.514995 7_2:-85659637 Msa1085200:intron
TGCTGGAAACGCAAGAAGAA+AGG 0.516899 7_2:-85658201 Msa1085200:CDS
TCTATACTCATCCCTAAGCT+TGG 0.519914 7_2:+85662833 None:intergenic
TGGAATTTCCGAGGTCACTC+TGG 0.520278 7_2:-85662774 Msa1085200:CDS
GCATATGGGTTTGAGGGAGA+AGG 0.522543 7_2:-85660427 Msa1085200:CDS
CCATCGGAACCAACTGATAA+CGG 0.523052 7_2:-85662984 Msa1085200:CDS
ACTGATAACGGTGCTGATAA+CGG 0.523153 7_2:-85662972 Msa1085200:CDS
TATGAAGAAAAGATATAATG+AGG 0.526790 7_2:-85659745 Msa1085200:CDS
CCATGCACAAATTATTCTCT+CGG 0.526826 7_2:+85657123 None:intergenic
CCACTAGCAGGGCACAAGAT+GGG 0.531363 7_2:-85662878 Msa1085200:CDS
GGTGAATATCTGCGAAAGAT+GGG 0.536287 7_2:-85662573 Msa1085200:CDS
CCATCTTGTGCCCTGCTAGT+GGG 0.536337 7_2:+85662879 None:intergenic
ATAGGTACTCGAGTCCATAT+TGG 0.536518 7_2:-85659813 Msa1085200:CDS
ATTAATGAATATAATCCTAG+TGG 0.537739 7_2:-85658306 Msa1085200:CDS
CATATGCATCAGACCATCAC+GGG 0.537748 7_2:-85662686 Msa1085200:CDS
TCAAAGTTGTCATGATTGAA+GGG 0.539832 7_2:-85659647 Msa1085200:CDS
CCCACTAGCAGGGCACAAGA+TGG 0.540992 7_2:-85662879 Msa1085200:CDS
GAGAAATAGCTCTCTTCAGA+TGG 0.542142 7_2:-85660774 Msa1085200:CDS
GAAAATACAGTCAAGTGCTA+AGG 0.543949 7_2:-85661921 Msa1085200:CDS
TTGTAGAATTCTATAAAGAC+TGG 0.550308 7_2:-85662743 Msa1085200:CDS
TGTTAATACAGAGCCGAAGT+CGG 0.559361 7_2:-85662649 Msa1085200:CDS
GCAAGTGCATTATCTAAGCC+GGG 0.559583 7_2:+85662720 None:intergenic
TAAGAGTAACGATGAACTGC+AGG 0.562042 7_2:-85660349 Msa1085200:CDS
ACTGGATATGAAACAAAAGC+TGG 0.563267 7_2:-85660544 Msa1085200:CDS
TTTCAGGTGGTATAAAGGCT+AGG 0.564453 7_2:-85663311 Msa1085200:intron
TACAAAAGCAGTTTGAGTCT+CGG 0.566152 7_2:+85656982 None:intergenic
GAAACTGGCTGAAGATCAGA+AGG 0.567201 7_2:-85660714 Msa1085200:intron
GAACCAAACACTAATCATCA+AGG 0.567695 7_2:-85660376 Msa1085200:CDS
GGAAGAACAAGCTCGAAAGC+AGG 0.567972 7_2:-85662523 Msa1085200:CDS
AGGAGAGCAACTTTGCAAGA+AGG 0.568496 7_2:-85658243 Msa1085200:CDS
AAATATTAGGGATTTGACAA+TGG 0.572482 7_2:+85664566 None:intergenic
AGTTAATATTCCCACTAGCA+GGG 0.577595 7_2:-85662889 Msa1085200:CDS
GAATTCTATAAAGACTGGCC+CGG 0.577874 7_2:-85662738 Msa1085200:CDS
GAAGTCGGGTCTTTATGCAT+GGG 0.578902 7_2:-85662634 Msa1085200:CDS
GATGACGATGAAAAGCTGAA+TGG 0.580152 7_2:-85658387 Msa1085200:CDS
CTTTGTATTATCTCTAGCAT+GGG 0.580952 7_2:-85656951 Msa1085200:three_prime_UTR
TTATCAGCACCGTTATCAGT+TGG 0.584851 7_2:+85662975 None:intergenic
CCGAGAGAATAATTTGTGCA+TGG 0.590689 7_2:-85657123 Msa1085200:three_prime_UTR
GAGTTATGGAACTATAAAGC+GGG 0.593653 7_2:-85658267 Msa1085200:CDS
GAAGAAAAGATATAATGAGG+AGG 0.605682 7_2:-85659742 Msa1085200:CDS
TTAACTATAACTCCAATCCA+AGG 0.605894 7_2:+85662906 None:intergenic
AGAAGAAAGGAATGTTGTGA+AGG 0.608106 7_2:-85658188 Msa1085200:intron
TAGGGATGAGTATAGACGCA+GGG 0.612645 7_2:-85662826 Msa1085200:CDS
TTTATAGTTCCATAACTCTG+AGG 0.618749 7_2:+85658272 None:intergenic
AGTCTTTATAGAATTCTACA+AGG 0.623481 7_2:+85662745 None:intergenic
GGGCGGTACCAGAGTGACCT+CGG 0.624880 7_2:+85662766 None:intergenic
TTAATGAATATAATCCTAGT+GGG 0.627933 7_2:-85658305 Msa1085200:CDS
TTTATAGAATTCTACAAGGG+CGG 0.629108 7_2:+85662749 None:intergenic
ACTCCTGCAACATGCTTCTG+GGG 0.631536 7_2:-85663105 Msa1085200:CDS
TATGAATATAGATACTCCAT+CGG 0.631604 7_2:-85663000 Msa1085200:CDS
GAGGTTACATATCTCCCACT+AGG 0.640674 7_2:+85658291 None:intergenic
TATGGAACTATAAAGCGGGA+AGG 0.642700 7_2:-85658263 Msa1085200:CDS
GTGCTAAGGATCACTTCCAA+AGG 0.644535 7_2:-85661907 Msa1085200:CDS
CATGCATAAAGACCCGACTT+CGG 0.645714 7_2:+85662636 None:intergenic
GCATATGCATCAGACCATCA+CGG 0.645968 7_2:-85662687 Msa1085200:CDS
ATATTGGTGTGAAGAGAATG+GGG 0.648291 7_2:-85659797 Msa1085200:CDS
TGAGTCGCGGAGAATCACAT+TGG 0.648552 7_2:-85661828 Msa1085200:CDS
CTCCGTTAAAGATGCCACCA+CGG 0.652925 7_2:+85658329 None:intergenic
AATCCTCTGTGGAATTTCCG+AGG 0.653346 7_2:-85662783 Msa1085200:CDS
GAATGGACTGAGAAAAGAAG+TGG 0.656264 7_2:-85658370 Msa1085200:CDS
AATGTCTCAGAGCTCTGAGG+AGG 0.657434 7_2:-85663279 Msa1085200:CDS
AGAGTTATGGAACTATAAAG+CGG 0.659050 7_2:-85658268 Msa1085200:CDS
ACAAGTGAACTTCTCATCCG+AGG 0.660081 7_2:+85663172 None:intergenic
TTAGGGATGAGTATAGACGC+AGG 0.666699 7_2:-85662827 Msa1085200:CDS
AAGTCAGAATGTGAAAACCT+CGG 0.672200 7_2:-85663189 Msa1085200:CDS
AGTAGTCACACACACTCACA+CGG 0.674976 7_2:-85664628 Msa1085200:five_prime_UTR
GTCTTTATAGAATTCTACAA+GGG 0.676413 7_2:+85662746 None:intergenic
AGGGATGAGTATAGACGCAG+GGG 0.684798 7_2:-85662825 Msa1085200:CDS
AGAAAAGTGAGCTTGAGTCG+CGG 0.686345 7_2:-85661841 Msa1085200:CDS
TACAATGTCTCAGAGCTCTG+AGG 0.691431 7_2:-85663282 Msa1085200:exon
CATATCGAGTCAATCCTCTG+TGG 0.700317 7_2:-85662794 Msa1085200:CDS
AAAGGCATATAGTGCCGTGG+TGG 0.703811 7_2:-85658343 Msa1085200:CDS
CCATGCTAGAGATAATACAA+AGG 0.708587 7_2:+85656952 None:intergenic
AATGGACTGAGAAAAGAAGT+GGG 0.713485 7_2:-85658369 Msa1085200:CDS
AGAGAATAATTTGTGCATGG+CGG 0.721545 7_2:-85657120 Msa1085200:three_prime_UTR
TGAAAAGGCATATAGTGCCG+TGG 0.725018 7_2:-85658346 Msa1085200:CDS
TATTGGTGTGAAGAGAATGG+GGG 0.746922 7_2:-85659796 Msa1085200:CDS
TGACCTCGGAAATTCCACAG+AGG 0.808295 7_2:+85662780 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTATTTCATTTTTATTTTT+AGG - chr7_2:85657177-85657196 Msa1085200:intron 10.0%
!!! TTTTTATTTTTATTTTTACG+AGG - chr7_2:85657300-85657319 Msa1085200:intron 10.0%
!! ATCAACAAAAAAAAAATATT+AGG + chr7_2:85661231-85661250 None:intergenic 10.0%
!!! TTTTTACATTACTTTTATAA+TGG - chr7_2:85661488-85661507 Msa1085200:intron 10.0%
!! TATATATATATATATTCACA+TGG + chr7_2:85662545-85662564 None:intergenic 10.0%
!!! AGTGAAATTAATTGATTTTT+GGG - chr7_2:85657134-85657153 Msa1085200:three_prime_UTR 15.0%
!! ATTGTTAAATTGAATTTAGA+TGG - chr7_2:85657483-85657502 Msa1085200:intron 15.0%
!!! GTTTTTTTGTTTTAACATAT+TGG - chr7_2:85659777-85659796 Msa1085200:CDS 15.0%
!!! TTGATGTATTTACTTTAAAA+TGG - chr7_2:85660087-85660106 Msa1085200:intron 15.0%
!! TTTAAATATCAAATAGTAAG+TGG + chr7_2:85660499-85660518 None:intergenic 15.0%
!!! TCTTAAGAAATATTTTTCTT+GGG + chr7_2:85660527-85660546 None:intergenic 15.0%
!!! TTCTTAAGAAATATTTTTCT+TGG + chr7_2:85660528-85660547 None:intergenic 15.0%
!! TAATTCAAGTATGAAAAAAT+TGG + chr7_2:85661195-85661214 None:intergenic 15.0%
!!! TTTTTCATACTTGAATTATT+TGG - chr7_2:85661197-85661216 Msa1085200:intron 15.0%
!! CAGTAAAATGTATAAAAAAA+AGG + chr7_2:85661549-85661568 None:intergenic 15.0%
!!! TTATCACTTTTAATCAATTT+TGG - chr7_2:85661886-85661905 Msa1085200:CDS 15.0%
!!! TATCTATTTTATCTGTATAA+TGG - chr7_2:85662929-85662948 Msa1085200:CDS 15.0%
!! CTAAAAAAAAAAAAATCAGA+AGG + chr7_2:85663774-85663793 None:intergenic 15.0%
!! AAAAATAAGAAAATATGAGA+TGG + chr7_2:85664093-85664112 None:intergenic 15.0%
!! AATTATGACCTAAGAAAAAT+TGG + chr7_2:85656998-85657017 None:intergenic 20.0%
!! CATAATTTCATAACTCAATT+CGG - chr7_2:85657011-85657030 Msa1085200:three_prime_UTR 20.0%
!!! CAAATTTTTCACTGTTTATT+CGG - chr7_2:85657094-85657113 Msa1085200:three_prime_UTR 20.0%
!!! CAGTGAAATTAATTGATTTT+TGG - chr7_2:85657133-85657152 Msa1085200:three_prime_UTR 20.0%
!!! TTTGATAATTGTTTGATTAG+TGG - chr7_2:85657253-85657272 Msa1085200:intron 20.0%
!!! TTGATAATTGTTTGATTAGT+GGG - chr7_2:85657254-85657273 Msa1085200:intron 20.0%
!! AAAATAAAAAGTTGAAACAC+TGG + chr7_2:85657290-85657309 None:intergenic 20.0%
!!! TTATTAATCTGAAGTTTGAA+GGG - chr7_2:85657431-85657450 Msa1085200:intron 20.0%
!!! TTGAATTTAGATGGTTTTTT+AGG - chr7_2:85657492-85657511 Msa1085200:intron 20.0%
!!! TGGTTTTTTAGGTTATTTTA+AGG - chr7_2:85657503-85657522 Msa1085200:intron 20.0%
!!! TCCTTTTTATAAGAAACAAA+TGG - chr7_2:85657772-85657791 Msa1085200:intron 20.0%
!!! CCTTTTTATAAGAAACAAAT+GGG - chr7_2:85657773-85657792 Msa1085200:intron 20.0%
!! TCAACAAAAGTTAATGTATT+TGG - chr7_2:85657796-85657815 Msa1085200:intron 20.0%
!!! GCTGTTTTTATAAACTATAT+TGG - chr7_2:85657939-85657958 Msa1085200:intron 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG - chr7_2:85658416-85658435 Msa1085200:intron 20.0%
!! TACAAAAAGAACAATATCAT+TGG - chr7_2:85658849-85658868 Msa1085200:intron 20.0%
!! AAATTATTGAAAAGTAACTC+GGG + chr7_2:85659108-85659127 None:intergenic 20.0%
!! CAAATTATTGAAAAGTAACT+CGG + chr7_2:85659109-85659128 None:intergenic 20.0%
!! ATTCTGAATTTGACAATTAA+GGG - chr7_2:85659288-85659307 Msa1085200:intron 20.0%
!! TTTCTTTATCTCTAAATACA+AGG + chr7_2:85659506-85659525 None:intergenic 20.0%
!!! CATATTGGTTGTTATTAATA+TGG - chr7_2:85659792-85659811 Msa1085200:CDS 20.0%
!! CAACAATTACTGTTAAATAT+TGG + chr7_2:85660252-85660271 None:intergenic 20.0%
!! CAATATTTAACAGTAATTGT+TGG - chr7_2:85660250-85660269 Msa1085200:intron 20.0%
!!! GCTTTTAATGATATGAAATT+CGG - chr7_2:85660316-85660335 Msa1085200:intron 20.0%
!!! CTTTTAATGATATGAAATTC+GGG - chr7_2:85660317-85660336 Msa1085200:intron 20.0%
!! AGATATAAATGTTATGAAAC+TGG - chr7_2:85660714-85660733 Msa1085200:intron 20.0%
!! AGTATGAAAAAATTGGAAAA+TGG + chr7_2:85661188-85661207 None:intergenic 20.0%
!! TATGAAGAAAAGATATAATG+AGG - chr7_2:85661698-85661717 Msa1085200:intron 20.0%
!! AAAGTTAAAAATACAGTTAC+TGG + chr7_2:85662132-85662151 None:intergenic 20.0%
!!! AGTAACTGTATTTTTAACTT+TGG - chr7_2:85662131-85662150 Msa1085200:intron 20.0%
!! TTAATCTGATCATTATCAAA+GGG + chr7_2:85662623-85662642 None:intergenic 20.0%
!! ATTAATCTGATCATTATCAA+AGG + chr7_2:85662624-85662643 None:intergenic 20.0%
!! ATAAAGAGCAATTAACTATA+AGG + chr7_2:85662739-85662758 None:intergenic 20.0%
!! ATTAATGAATATAATCCTAG+TGG - chr7_2:85663137-85663156 Msa1085200:CDS 20.0%
!! TTAATGAATATAATCCTAGT+GGG - chr7_2:85663138-85663157 Msa1085200:CDS 20.0%
!! TTCTAGTAAAAGTAATCATA+TGG + chr7_2:85663447-85663466 None:intergenic 20.0%
!!! ATGATTACTTTTACTAGAAA+AGG - chr7_2:85663448-85663467 Msa1085200:intron 20.0%
!!! TGATTACTTTTACTAGAAAA+GGG - chr7_2:85663449-85663468 Msa1085200:intron 20.0%
!!! TTTTTGATATTGATAGAAAC+TGG + chr7_2:85663537-85663556 None:intergenic 20.0%
!!! AAAATTATCCTTTTTGGTTA+AGG + chr7_2:85663969-85663988 None:intergenic 20.0%
!!! CTGAAAAAAATTATCCTTTT+TGG + chr7_2:85663975-85663994 None:intergenic 20.0%
!!! AATTTTTTTCAGAAACATTG+TGG - chr7_2:85663983-85664002 Msa1085200:intron 20.0%
!!! TTAATTTTTGGCATAACTTT+TGG - chr7_2:85664144-85664163 Msa1085200:intron 20.0%
!!! TTTTGGAGATTTCTAATTTT+GGG - chr7_2:85664161-85664180 Msa1085200:intron 20.0%
!! AATTTATGATCATGTTAAAC+TGG - chr7_2:85664412-85664431 Msa1085200:intron 20.0%
! AAATATTAGGGATTTGACAA+TGG + chr7_2:85656880-85656899 None:intergenic 25.0%
! ATGAGGTTCTCAAAATATTA+GGG + chr7_2:85656892-85656911 None:intergenic 25.0%
! GTCATAAAAACAAAATGATG+AGG + chr7_2:85656909-85656928 None:intergenic 25.0%
! TAAGAAAAATTGGAAGTAGA+AGG + chr7_2:85656988-85657007 None:intergenic 25.0%
!! TTCTACTTCCAATTTTTCTT+AGG - chr7_2:85656987-85657006 Msa1085200:three_prime_UTR 25.0%
! AAATTGAGAAATGCAGAAAT+GGG + chr7_2:85657043-85657062 None:intergenic 25.0%
! AAAATTGAGAAATGCAGAAA+TGG + chr7_2:85657044-85657063 None:intergenic 25.0%
! TTTGAGAAACAAAAAGAGAA+AGG + chr7_2:85657078-85657097 None:intergenic 25.0%
! TTTGATTATCAACTGAATTG+TGG - chr7_2:85657229-85657248 Msa1085200:intron 25.0%
! TTGATTATCAACTGAATTGT+GGG - chr7_2:85657230-85657249 Msa1085200:intron 25.0%
! TGATAATTGTTTGATTAGTG+GGG - chr7_2:85657255-85657274 Msa1085200:intron 25.0%
!! GTTATTAATCTGAAGTTTGA+AGG - chr7_2:85657430-85657449 Msa1085200:intron 25.0%
! ATGAAATTTCTGTTCTACTT+TGG - chr7_2:85657602-85657621 Msa1085200:intron 25.0%
!! TTGTTTCTTATAAAAAGGAC+CGG + chr7_2:85657771-85657790 None:intergenic 25.0%
!! CCCATTTGTTTCTTATAAAA+AGG + chr7_2:85657776-85657795 None:intergenic 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr7_2:85657843-85657862 None:intergenic 25.0%
!! CTTTTTACAAGAGACAAAAT+TGG + chr7_2:85657866-85657885 None:intergenic 25.0%
!! CAATTTTGTCTCTTGTAAAA+AGG - chr7_2:85657864-85657883 Msa1085200:intron 25.0%
! TAACACTGAATTTGTATTTC+AGG - chr7_2:85658116-85658135 Msa1085200:intron 25.0%
!!! TTTGGCTTTAGTGAAATATT+TGG - chr7_2:85658410-85658429 Msa1085200:intron 25.0%
! TATGAATATAGATACTCCAT+CGG - chr7_2:85658443-85658462 Msa1085200:intron 25.0%
! GTCTTTATAGAATTCTACAA+GGG + chr7_2:85658700-85658719 None:intergenic 25.0%
! AGTCTTTATAGAATTCTACA+AGG + chr7_2:85658701-85658720 None:intergenic 25.0%
! TTGTAGAATTCTATAAAGAC+TGG - chr7_2:85658700-85658719 Msa1085200:intron 25.0%
!!! CGAGTTACTTTTCAATAATT+TGG - chr7_2:85659107-85659126 Msa1085200:intron 25.0%
!! ACTTTTCAATAATTTGGATC+AGG - chr7_2:85659113-85659132 Msa1085200:intron 25.0%
! GATTCTGAATTTGACAATTA+AGG - chr7_2:85659287-85659306 Msa1085200:intron 25.0%
! TTCTGAATTTGACAATTAAG+GGG - chr7_2:85659289-85659308 Msa1085200:intron 25.0%
!! ATTTCTGAAGAATATTATGC+TGG - chr7_2:85659397-85659416 Msa1085200:intron 25.0%
!! CATCTAAAGTATCAATCATA+TGG + chr7_2:85659837-85659856 None:intergenic 25.0%
! AAGTGGAAATTGATTAAACT+TGG + chr7_2:85659890-85659909 None:intergenic 25.0%
! TTTGATTATCATGGAATGAT+TGG - chr7_2:85659921-85659940 Msa1085200:intron 25.0%
!! ATCATTTTCAGTTGAATCTA+TGG - chr7_2:85659951-85659970 Msa1085200:intron 25.0%
! AATCTATGGATGATTAATTC+TGG - chr7_2:85659965-85659984 Msa1085200:intron 25.0%
! ACTGGAAATATGATTAAAAC+TGG - chr7_2:85660001-85660020 Msa1085200:intron 25.0%
! TTTGAGTAGTATGTTGTTAA+AGG - chr7_2:85660030-85660049 Msa1085200:intron 25.0%
! TTGAGTAGTATGTTGTTAAA+GGG - chr7_2:85660031-85660050 Msa1085200:intron 25.0%
! TCTCCAATAAAATTCCATAT+TGG - chr7_2:85660359-85660378 Msa1085200:CDS 25.0%
!! CATCCAATATGGAATTTTAT+TGG + chr7_2:85660365-85660384 None:intergenic 25.0%
! ATATCAAATAGTAAGTGGAA+TGG + chr7_2:85660494-85660513 None:intergenic 25.0%
! TTTAAATAATCTCAGAGACA+CGG + chr7_2:85660573-85660592 None:intergenic 25.0%
!!! CATTACTTTTATAATGGACT+TGG - chr7_2:85661494-85661513 Msa1085200:intron 25.0%
!! CATGAAGATAGTCAATATTT+TGG - chr7_2:85661939-85661958 Msa1085200:intron 25.0%
! TATAATACACCTAAGTAACA+AGG + chr7_2:85662283-85662302 None:intergenic 25.0%
!! TGTTACTTAGGTGTATTATA+CGG - chr7_2:85662283-85662302 Msa1085200:intron 25.0%
!! AATATTTGGTAATCCCTTAA+AGG - chr7_2:85662447-85662466 Msa1085200:CDS 25.0%
! TAAGGTAATATCATGAATCT+CGG + chr7_2:85662721-85662740 None:intergenic 25.0%
!! TGCTCTTTATTCAACTATTT+TGG - chr7_2:85662749-85662768 Msa1085200:CDS 25.0%
! CTAAATATAGTCATCTTAGA+TGG + chr7_2:85662785-85662804 None:intergenic 25.0%
!! CATCTAAGATGACTATATTT+AGG - chr7_2:85662783-85662802 Msa1085200:CDS 25.0%
! AAGATCTTAATAATGTGCTT+TGG - chr7_2:85662818-85662837 Msa1085200:CDS 25.0%
! CTTGTCAATTTAATCATCAA+TGG + chr7_2:85662847-85662866 None:intergenic 25.0%
!! CATTGATGATTAAATTGACA+AGG - chr7_2:85662845-85662864 Msa1085200:CDS 25.0%
! AGAGAAAATTACAGTAACAT+AGG + chr7_2:85663305-85663324 None:intergenic 25.0%
!!! CTGTTACTTTTAAGTAACTA+CGG + chr7_2:85663360-85663379 None:intergenic 25.0%
! TAAAAGTAATCATATGGAAG+GGG + chr7_2:85663441-85663460 None:intergenic 25.0%
! GTAAAAGTAATCATATGGAA+GGG + chr7_2:85663442-85663461 None:intergenic 25.0%
! AGTAAAAGTAATCATATGGA+AGG + chr7_2:85663443-85663462 None:intergenic 25.0%
!! ATATTGATAGAAACTGGTTT+CGG + chr7_2:85663531-85663550 None:intergenic 25.0%
! ATATATAAGTCAGAAACTGA+AGG - chr7_2:85663578-85663597 Msa1085200:intron 25.0%
! AAAAACCCAATTCCATTAAA+GGG + chr7_2:85663699-85663718 None:intergenic 25.0%
! AAAAAACCCAATTCCATTAA+AGG + chr7_2:85663700-85663719 None:intergenic 25.0%
! AAAAAAAATCAGAAGGTTGA+GGG + chr7_2:85663767-85663786 None:intergenic 25.0%
! AAAAAAAAATCAGAAGGTTG+AGG + chr7_2:85663768-85663787 None:intergenic 25.0%
!!! CTTTTGGAGATTTCTAATTT+TGG - chr7_2:85664160-85664179 Msa1085200:intron 25.0%
!! TTTGGAGATTTCTAATTTTG+GGG - chr7_2:85664162-85664181 Msa1085200:intron 25.0%
!!! TAATTTTGGGGTTTGTAATT+AGG - chr7_2:85664174-85664193 Msa1085200:intron 25.0%
!!! ATCTTTTCATGTTTTGTTGA+TGG - chr7_2:85664274-85664293 Msa1085200:intron 25.0%
GATGAGGTTCTCAAAATATT+AGG + chr7_2:85656893-85656912 None:intergenic 30.0%
AATTGGAAGTAGAAGGAAAA+TGG + chr7_2:85656981-85657000 None:intergenic 30.0%
!! AATGTCTCATGTTGACTTAA+GGG - chr7_2:85657395-85657414 Msa1085200:intron 30.0%
AAATAAGACAGACAGGATTT+AGG - chr7_2:85657641-85657660 Msa1085200:intron 30.0%
AATAAGACAGACAGGATTTA+GGG - chr7_2:85657642-85657661 Msa1085200:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr7_2:85657668-85657687 None:intergenic 30.0%
! TTTTAATATCATACTCCCTC+CGG - chr7_2:85657749-85657768 Msa1085200:intron 30.0%
! ATAAATTTGGTGAGACTGTT+TGG + chr7_2:85658031-85658050 None:intergenic 30.0%
CTTATCTACTGGCATAAATT+TGG + chr7_2:85658044-85658063 None:intergenic 30.0%
! TTGTATTTCAGGTGGTATAA+AGG - chr7_2:85658127-85658146 Msa1085200:intron 30.0%
TGTTATGAAGAACTGAAAAG+TGG - chr7_2:85658231-85658250 Msa1085200:CDS 30.0%
! TTTCTTTTCTTAGGACAGTA+TGG + chr7_2:85658297-85658316 None:intergenic 30.0%
ACTGTCCTAAGAAAAGAAAA+CGG - chr7_2:85658298-85658317 Msa1085200:CDS 30.0%
! TAATCCCGTTTTCTTTTCTT+AGG + chr7_2:85658306-85658325 None:intergenic 30.0%
TTAACTATAACTCCAATCCA+AGG + chr7_2:85658540-85658559 None:intergenic 30.0%
TTTATAGAATTCTACAAGGG+CGG + chr7_2:85658697-85658716 None:intergenic 30.0%
CTCAATAATGTTGGTCAAAT+TGG + chr7_2:85658958-85658977 None:intergenic 30.0%
CAATTTGACCAACATTATTG+AGG - chr7_2:85658956-85658975 Msa1085200:intron 30.0%
! GTTTTTGACCTCAATAATGT+TGG + chr7_2:85658967-85658986 None:intergenic 30.0%
! TGTCATAGCAGAATTCATTT+TGG + chr7_2:85659033-85659052 None:intergenic 30.0%
CTCATTCAAGCTTATAATGA+AGG - chr7_2:85659065-85659084 Msa1085200:intron 30.0%
TCTGAATTTGACAATTAAGG+GGG - chr7_2:85659290-85659309 Msa1085200:intron 30.0%
GTTGCACCATAAATAAAGTT+TGG - chr7_2:85659361-85659380 Msa1085200:intron 30.0%
! ACGATGCCAAACTTTATTTA+TGG + chr7_2:85659370-85659389 None:intergenic 30.0%
CGTGATCATTAAAAATCCTT+TGG + chr7_2:85659555-85659574 None:intergenic 30.0%
GATTCCTGTAGAATTTGTAT+TGG - chr7_2:85659746-85659765 Msa1085200:CDS 30.0%
TTCTCCAATACAAATTCTAC+AGG + chr7_2:85659753-85659772 None:intergenic 30.0%
ATCAAACATGCTAAGTAAAG+TGG + chr7_2:85659907-85659926 None:intergenic 30.0%
CTTAGCATGTTTGATTATCA+TGG - chr7_2:85659912-85659931 Msa1085200:intron 30.0%
ATTATCATGGAATGATTGGT+TGG - chr7_2:85659925-85659944 Msa1085200:intron 30.0%
! TGATTAATTCTGGAAAGAGT+CGG - chr7_2:85659975-85659994 Msa1085200:intron 30.0%
ATCTGTCTATCTGTGTTTAA+CGG - chr7_2:85660148-85660167 Msa1085200:intron 30.0%
ACTTGTGATTTAAGCAACAA+GGG + chr7_2:85660211-85660230 None:intergenic 30.0%
!! ATTGTTGGCTCTACTTAAAA+TGG - chr7_2:85660265-85660284 Msa1085200:intron 30.0%
ATATGAAATTCGGGTAATGA+GGG - chr7_2:85660326-85660345 Msa1085200:CDS 30.0%
! AGGAAAAAAGTTTTACAGGA+TGG + chr7_2:85660426-85660445 None:intergenic 30.0%
AAATAGTAAGTGGAATGGAA+AGG + chr7_2:85660489-85660508 None:intergenic 30.0%
!!! AGATGTAGAAGTTTTGAAGA+AGG - chr7_2:85660983-85661002 Msa1085200:intron 30.0%
! AAGGTAGATGATTTGCATAT+GGG - chr7_2:85661002-85661021 Msa1085200:intron 30.0%
AAAGCACAACTTACACATAT+AGG + chr7_2:85661331-85661350 None:intergenic 30.0%
TAATGCTTTCTCTATCTTGT+AGG - chr7_2:85661596-85661615 Msa1085200:intron 30.0%
AATGCTTTCTCTATCTTGTA+GGG - chr7_2:85661597-85661616 Msa1085200:intron 30.0%
! TTGTAGGGCATTAAAGATAT+AGG - chr7_2:85661612-85661631 Msa1085200:intron 30.0%
! ATCTTTTCTTCATAGCTTCA+AGG + chr7_2:85661692-85661711 None:intergenic 30.0%
GAAGAAAAGATATAATGAGG+AGG - chr7_2:85661701-85661720 Msa1085200:intron 30.0%
TTCAGAACTATGTTCATTGT+GGG - chr7_2:85661740-85661759 Msa1085200:intron 30.0%
TCAAAGTTGTCATGATTGAA+GGG - chr7_2:85661796-85661815 Msa1085200:CDS 30.0%
TAATGAAGCATGTAGATTTC+TGG + chr7_2:85661869-85661888 None:intergenic 30.0%
! TATTGACTATCTTCATGAAG+AGG + chr7_2:85661936-85661955 None:intergenic 30.0%
TACTCTTGATTGGAACTATT+TGG - chr7_2:85661969-85661988 Msa1085200:intron 30.0%
ATTACATTTACAGGTTCAGA+AGG + chr7_2:85661995-85662014 None:intergenic 30.0%
AGAGAAGGAATTACATTTAC+AGG + chr7_2:85662004-85662023 None:intergenic 30.0%
TTTGTATCCAAGTGATTTAC+TGG - chr7_2:85662025-85662044 Msa1085200:intron 30.0%
AAATATGGTAGGGGATTAAT+AGG - chr7_2:85662074-85662093 Msa1085200:intron 30.0%
! ATGCAAAATCCTTGTTACTT+AGG - chr7_2:85662271-85662290 Msa1085200:intron 30.0%
GTTACTTAGGTGTATTATAC+GGG - chr7_2:85662284-85662303 Msa1085200:intron 30.0%
TTACTTAGGTGTATTATACG+GGG - chr7_2:85662285-85662304 Msa1085200:intron 30.0%
AAGAATTGAGGTGGAATATT+TGG - chr7_2:85662433-85662452 Msa1085200:CDS 30.0%
AAATGCAACAAGTCCTTTAA+GGG + chr7_2:85662463-85662482 None:intergenic 30.0%
AAAATGCAACAAGTCCTTTA+AGG + chr7_2:85662464-85662483 None:intergenic 30.0%
AATACAGTAATACTCATAGC+TGG - chr7_2:85662675-85662694 Msa1085200:CDS 30.0%
ATGAATCTCGGGATATTATA+GGG + chr7_2:85662709-85662728 None:intergenic 30.0%
AAGGTAATATCATGAATCTC+GGG + chr7_2:85662720-85662739 None:intergenic 30.0%
ATATAGTCATCTTAGATGGT+AGG + chr7_2:85662781-85662800 None:intergenic 30.0%
GTCAATTTAATCATCAATGG+TGG + chr7_2:85662844-85662863 None:intergenic 30.0%
CGTCATCTTTAATAATTTCC+TGG + chr7_2:85663043-85663062 None:intergenic 30.0%
TTTATAGTTCCATAACTCTG+AGG + chr7_2:85663174-85663193 None:intergenic 30.0%
AGAGTTATGGAACTATAAAG+CGG - chr7_2:85663175-85663194 Msa1085200:CDS 30.0%
ATTCAAAGAAGTAACTTAGG+TGG + chr7_2:85663383-85663402 None:intergenic 30.0%
GAGATTCAAAGAAGTAACTT+AGG + chr7_2:85663386-85663405 None:intergenic 30.0%
TCTTCTCAAGAAATTACAAG+TGG - chr7_2:85663404-85663423 Msa1085200:intron 30.0%
AAAAGTAATCATATGGAAGG+GGG + chr7_2:85663440-85663459 None:intergenic 30.0%
AAGAAAAAGCTAAGACAAAG+AGG + chr7_2:85663671-85663690 None:intergenic 30.0%
! TTTTCTTACAGTCCCTTTAA+TGG - chr7_2:85663684-85663703 Msa1085200:intron 30.0%
TTTGAAAGATCTATCACTGT+GGG + chr7_2:85663724-85663743 None:intergenic 30.0%
!! TTTTGAAAGATCTATCACTG+TGG + chr7_2:85663725-85663744 None:intergenic 30.0%
AAAAAAATCAGAAGGTTGAG+GGG + chr7_2:85663766-85663785 None:intergenic 30.0%
!!! TTTTTGCACTGGTTTTGTTT+TGG - chr7_2:85663847-85663866 Msa1085200:intron 30.0%
CTACAACAAGAAAACAACAA+AGG + chr7_2:85663885-85663904 None:intergenic 30.0%
! CATGTTTTCCTTAACCAAAA+AGG - chr7_2:85663958-85663977 Msa1085200:intron 30.0%
AGAATAAAACTCAACATCTG+TGG + chr7_2:85664054-85664073 None:intergenic 30.0%
! AGCAAATTGATTCCAAACAT+AGG + chr7_2:85664227-85664246 None:intergenic 30.0%
TTATGCACAACCTTAATCTT+CGG + chr7_2:85664385-85664404 None:intergenic 30.0%
CTTTGTATTATCTCTAGCAT+GGG - chr7_2:85664492-85664511 Msa1085200:five_prime_UTR 30.0%
AAGTAGAAGGAAAATGGATC+TGG + chr7_2:85656975-85656994 None:intergenic 35.0%
GAGAAACAAAAAGAGAAAGG+AGG + chr7_2:85657075-85657094 None:intergenic 35.0%
!! GAATGTCTCATGTTGACTTA+AGG - chr7_2:85657394-85657413 Msa1085200:intron 35.0%
!! ATGTCTCATGTTGACTTAAG+GGG - chr7_2:85657396-85657415 Msa1085200:intron 35.0%
TATGTCAAGTCACACATTTG+AGG - chr7_2:85657537-85657556 Msa1085200:intron 35.0%
ATGTCAAGTCACACATTTGA+GGG - chr7_2:85657538-85657557 Msa1085200:intron 35.0%
!! TGTCTGTCTTATTTCAAGCT+TGG + chr7_2:85657635-85657654 None:intergenic 35.0%
AAGCTTGAAATAAGACAGAC+AGG - chr7_2:85657634-85657653 Msa1085200:intron 35.0%
TTCTTATAAAAAGGACCGGA+GGG + chr7_2:85657767-85657786 None:intergenic 35.0%
TTTCTTATAAAAAGGACCGG+AGG + chr7_2:85657768-85657787 None:intergenic 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG - chr7_2:85657869-85657888 Msa1085200:intron 35.0%
! TCATTTTATCTTACTCCCTC+CGG + chr7_2:85657891-85657910 None:intergenic 35.0%
ACCAATTTGAGCTTATCTAC+TGG + chr7_2:85658055-85658074 None:intergenic 35.0%
CACTGAATTTGTATTTCAGG+TGG - chr7_2:85658119-85658138 Msa1085200:intron 35.0%
!! TTCTGAGATAAGTGAGTATG+AGG - chr7_2:85658203-85658222 Msa1085200:CDS 35.0%
AAGTCAGAATGTGAAAACCT+CGG - chr7_2:85658254-85658273 Msa1085200:CDS 35.0%
CTGTCCTAAGAAAAGAAAAC+GGG - chr7_2:85658299-85658318 Msa1085200:CDS 35.0%
! AAATGAGTAGCCTTTTCTCT+TGG + chr7_2:85658393-85658412 None:intergenic 35.0%
AAGAGAAAAGGCTACTCATT+TGG - chr7_2:85658392-85658411 Msa1085200:CDS 35.0%
! ATTCTGATGAGCAGTTTGTT+TGG - chr7_2:85658514-85658533 Msa1085200:intron 35.0%
TAGTTAATATTCCCACTAGC+AGG - chr7_2:85658553-85658572 Msa1085200:intron 35.0%
AGTTAATATTCCCACTAGCA+GGG - chr7_2:85658554-85658573 Msa1085200:intron 35.0%
! TCTTTTTGTAGTCATCAGCT+CGG + chr7_2:85658839-85658858 None:intergenic 35.0%
ATAATTTGGATCAGGACTTG+TGG - chr7_2:85659121-85659140 Msa1085200:intron 35.0%
CAAATTCAGAATCAACCCAT+TGG + chr7_2:85659280-85659299 None:intergenic 35.0%
GAAAATACAGTCAAGTGCTA+AGG - chr7_2:85659522-85659541 Msa1085200:intron 35.0%
AAGAAAGTTGCTAGAAGAGA+TGG - chr7_2:85659669-85659688 Msa1085200:CDS 35.0%
!! TGTGTTGCTGCTTTCAATTA+AGG - chr7_2:85659855-85659874 Msa1085200:intron 35.0%
TCCAAAACAAGTTAAGTGTC+TGG - chr7_2:85660060-85660079 Msa1085200:intron 35.0%
!!! TCCAGACACTTAACTTGTTT+TGG + chr7_2:85660064-85660083 None:intergenic 35.0%
! TGTGTCTCTGATTTTCATCT+AGG - chr7_2:85660173-85660192 Msa1085200:intron 35.0%
CACTTGTGATTTAAGCAACA+AGG + chr7_2:85660212-85660231 None:intergenic 35.0%
CATAGCATATAACCACTCAT+TGG + chr7_2:85660297-85660316 None:intergenic 35.0%
GATATGAAATTCGGGTAATG+AGG - chr7_2:85660325-85660344 Msa1085200:intron 35.0%
! AGGGAGGAAAAAAGTTTTAC+AGG + chr7_2:85660430-85660449 None:intergenic 35.0%
!!! TTTTTTCCTCCCTCCAATTT+GGG - chr7_2:85660437-85660456 Msa1085200:CDS 35.0%
!! CAAGCTGAATGATTTTAGCA+TGG + chr7_2:85660872-85660891 None:intergenic 35.0%
ACTGGATATGAAACAAAAGC+TGG - chr7_2:85660899-85660918 Msa1085200:intron 35.0%
TATGAAACAAAAGCTGGAAC+TGG - chr7_2:85660905-85660924 Msa1085200:intron 35.0%
! GAAGGTAGATGATTTGCATA+TGG - chr7_2:85661001-85661020 Msa1085200:intron 35.0%
! ATGATTTGCATATGGGTTTG+AGG - chr7_2:85661009-85661028 Msa1085200:intron 35.0%
! TGATTTGCATATGGGTTTGA+GGG - chr7_2:85661010-85661029 Msa1085200:intron 35.0%
GAACCAAACACTAATCATCA+AGG - chr7_2:85661067-85661086 Msa1085200:intron 35.0%
CATATTGGTGTGAAGAGAAT+GGG - chr7_2:85661645-85661664 Msa1085200:intron 35.0%
ATATTGGTGTGAAGAGAATG+GGG - chr7_2:85661646-85661665 Msa1085200:intron 35.0%
TTCTTCATAGCTTCAAGGAA+CGG + chr7_2:85661687-85661706 None:intergenic 35.0%
CTTCAGAACTATGTTCATTG+TGG - chr7_2:85661739-85661758 Msa1085200:intron 35.0%
AGTATCTAAAAGACCCAGAT+TGG - chr7_2:85661766-85661785 Msa1085200:intron 35.0%
CATGATTGAAGGGAAAGAAA+AGG - chr7_2:85661806-85661825 Msa1085200:CDS 35.0%
ATTGAAGGGAAAGAAAAGGT+AGG - chr7_2:85661810-85661829 Msa1085200:CDS 35.0%
CACTTGGATACAAAAAGAGA+AGG + chr7_2:85662019-85662038 None:intergenic 35.0%
!! CGAAAAAAGTATCTGCTGTT+TGG - chr7_2:85662051-85662070 Msa1085200:intron 35.0%
! GTATCTGCTGTTTGGAAATA+TGG - chr7_2:85662059-85662078 Msa1085200:intron 35.0%
! TGCTGTTTGGAAATATGGTA+GGG - chr7_2:85662064-85662083 Msa1085200:intron 35.0%
TCATTCTGTGTTTGAAAGCT+CGG - chr7_2:85662187-85662206 Msa1085200:intron 35.0%
TATTATACGGGGAAAGTGAT+GGG - chr7_2:85662296-85662315 Msa1085200:intron 35.0%
TGAGTGAATACCAAAATGAG+TGG - chr7_2:85662341-85662360 Msa1085200:intron 35.0%
AATACCAAAATGAGTGGTAG+TGG - chr7_2:85662347-85662366 Msa1085200:intron 35.0%
ATACCAAAATGAGTGGTAGT+GGG - chr7_2:85662348-85662367 Msa1085200:intron 35.0%
CTGGAAAACAGAGAAATACA+TGG + chr7_2:85662493-85662512 None:intergenic 35.0%
! ATTTTCACTTTCTCTGATGC+TGG + chr7_2:85662512-85662531 None:intergenic 35.0%
CAAAGGGATTGCAATTTACA+TGG + chr7_2:85662607-85662626 None:intergenic 35.0%
TAATTCAGAAGAGAGAAGTC+TGG - chr7_2:85662646-85662665 Msa1085200:CDS 35.0%
CATGAATCTCGGGATATTAT+AGG + chr7_2:85662710-85662729 None:intergenic 35.0%
ATAAACTGTCCTAAAGCAGT+GGG + chr7_2:85662901-85662920 None:intergenic 35.0%
AATAAACTGTCCTAAAGCAG+TGG + chr7_2:85662902-85662921 None:intergenic 35.0%
! TTCTACGCATTTTTCATTCC+AGG - chr7_2:85663022-85663041 Msa1085200:CDS 35.0%
!! AATGGACTGAGAAAAGAAGT+GGG - chr7_2:85663074-85663093 Msa1085200:CDS 35.0%
GATATGTAACCTCAGAGTTA+TGG - chr7_2:85663162-85663181 Msa1085200:CDS 35.0%
GAGTTATGGAACTATAAAGC+GGG - chr7_2:85663176-85663195 Msa1085200:CDS 35.0%
! AGAAGGAGTGAAGTTTTTGT+TGG - chr7_2:85663217-85663236 Msa1085200:CDS 35.0%
AGAAGAAAGGAATGTTGTGA+AGG - chr7_2:85663255-85663274 Msa1085200:CDS 35.0%
AATTGGGAATTTCCCACTTA+AGG + chr7_2:85663496-85663515 None:intergenic 35.0%
TACAGTCCCTTTAATGGAAT+TGG - chr7_2:85663690-85663709 Msa1085200:intron 35.0%
ACAGTCCCTTTAATGGAATT+GGG - chr7_2:85663691-85663710 Msa1085200:intron 35.0%
!!! TGCAGTTTCTTTTTTTGCAC+TGG - chr7_2:85663836-85663855 Msa1085200:intron 35.0%
!! GATTTGTTGAAATTGAGCAG+CGG - chr7_2:85664005-85664024 Msa1085200:intron 35.0%
!!! TTTCATGTTTTGTTGATGGC+AGG - chr7_2:85664278-85664297 Msa1085200:intron 35.0%
CCATGCACAAATTATTCTCT+CGG + chr7_2:85664323-85664342 None:intergenic 35.0%
! AGAGAATAATTTGTGCATGG+CGG - chr7_2:85664323-85664342 Msa1085200:intron 35.0%
TACAAAAGCAGTTTGAGTCT+CGG + chr7_2:85664464-85664483 None:intergenic 35.0%
CCATGCTAGAGATAATACAA+AGG + chr7_2:85664494-85664513 None:intergenic 35.0%
CCTTTGTATTATCTCTAGCA+TGG - chr7_2:85664491-85664510 Msa1085200:five_prime_UTR 35.0%
!!! TGATTTTGTTTTGCGTATCC+AGG - chr7_2:85664597-85664616 Msa1085200:five_prime_UTR 35.0%
!!! ACTTAGTTTTGATCAAGACC+TGG + chr7_2:85664618-85664637 None:intergenic 35.0%
! GCTCTCTAAGAAGAGAGTTT+AGG + chr7_2:85656931-85656950 None:intergenic 40.0%
TTTGGTGAGACTGTTTGGTA+GGG + chr7_2:85658026-85658045 None:intergenic 40.0%
! ATTTGGTGAGACTGTTTGGT+AGG + chr7_2:85658027-85658046 None:intergenic 40.0%
GCCAGTAGATAAGCTCAAAT+TGG - chr7_2:85658051-85658070 Msa1085200:intron 40.0%
! TTTCAGGTGGTATAAAGGCT+AGG - chr7_2:85658132-85658151 Msa1085200:intron 40.0%
GAAGAGAAAGCCAAGAGAAA+AGG - chr7_2:85658380-85658399 Msa1085200:CDS 40.0%
TTATCAGCACCGTTATCAGT+TGG + chr7_2:85658471-85658490 None:intergenic 40.0%
!! ACTGATAACGGTGCTGATAA+CGG - chr7_2:85658471-85658490 Msa1085200:intron 40.0%
TCTATACTCATCCCTAAGCT+TGG + chr7_2:85658613-85658632 None:intergenic 40.0%
! GAATTCTATAAAGACTGGCC+CGG - chr7_2:85658705-85658724 Msa1085200:intron 40.0%
TGCAAGTGCATTATCTAAGC+CGG + chr7_2:85658727-85658746 None:intergenic 40.0%
TGTTAATACAGAGCCGAAGT+CGG - chr7_2:85658794-85658813 Msa1085200:intron 40.0%
! CTTTTTGTAGTCATCAGCTC+GGG + chr7_2:85658838-85658857 None:intergenic 40.0%
TGGTGAATATCTGCGAAAGA+TGG - chr7_2:85658869-85658888 Msa1085200:intron 40.0%
GGTGAATATCTGCGAAAGAT+GGG - chr7_2:85658870-85658889 Msa1085200:intron 40.0%
CAAAACCATACCTGAACTTC+AGG - chr7_2:85658899-85658918 Msa1085200:intron 40.0%
TTCTTCCTGAAGTTCAGGTA+TGG + chr7_2:85658907-85658926 None:intergenic 40.0%
TATGTAGTGCAACTTGCAAC+TGG - chr7_2:85659215-85659234 Msa1085200:intron 40.0%
! TAGCAGTATGTGGCTATTTC+CGG + chr7_2:85659327-85659346 None:intergenic 40.0%
TACTGCTAGGATCATTGCAA+CGG - chr7_2:85659339-85659358 Msa1085200:intron 40.0%
AAAGTTGCTAGAAGAGATGG+AGG - chr7_2:85659672-85659691 Msa1085200:CDS 40.0%
! TCTCTGATTTTCATCTAGGC+AGG - chr7_2:85660177-85660196 Msa1085200:intron 40.0%
! CTCTGATTTTCATCTAGGCA+GGG - chr7_2:85660178-85660197 Msa1085200:intron 40.0%
TGATTTAAGCAACAAGGGAC+GGG + chr7_2:85660206-85660225 None:intergenic 40.0%
GTGATTTAAGCAACAAGGGA+CGG + chr7_2:85660207-85660226 None:intergenic 40.0%
TGCTTAAATCACAAGTGACG+TGG - chr7_2:85660215-85660234 Msa1085200:intron 40.0%
AAATCACAAGTGACGTGGAA+CGG - chr7_2:85660220-85660239 Msa1085200:intron 40.0%
CCATTGCAATGCATCCAATA+TGG + chr7_2:85660376-85660395 None:intergenic 40.0%
CCATATTGGATGCATTGCAA+TGG - chr7_2:85660373-85660392 Msa1085200:CDS 40.0%
!!! CTTTTTTCCTCCCTCCAATT+TGG - chr7_2:85660436-85660455 Msa1085200:CDS 40.0%
! TTTTTCCTCCCTCCAATTTG+GGG - chr7_2:85660438-85660457 Msa1085200:CDS 40.0%
!! AAGGCTTTGTTTAACTCTGC+TGG - chr7_2:85660620-85660639 Msa1085200:intron 40.0%
GAGAAATAGCTCTCTTCAGA+TGG - chr7_2:85660669-85660688 Msa1085200:intron 40.0%
CATTCAGCTTGAAAGACAAC+TGG - chr7_2:85660881-85660900 Msa1085200:intron 40.0%
CTGGAGATTCAGCAACTAAA+AGG - chr7_2:85660924-85660943 Msa1085200:intron 40.0%
! GCTCCTTGATGATTAGTGTT+TGG + chr7_2:85661073-85661092 None:intergenic 40.0%
TAAGAGTAACGATGAACTGC+AGG - chr7_2:85661094-85661113 Msa1085200:intron 40.0%
ATAGGTACTCGAGTCCATAT+TGG - chr7_2:85661630-85661649 Msa1085200:intron 40.0%
CCATTCTCTTCACACCAATA+TGG + chr7_2:85661647-85661666 None:intergenic 40.0%
CCATATTGGTGTGAAGAGAA+TGG - chr7_2:85661644-85661663 Msa1085200:intron 40.0%
TATTGGTGTGAAGAGAATGG+GGG - chr7_2:85661647-85661666 Msa1085200:intron 40.0%
! TGGTTGACTCTACTCTTGAT+TGG - chr7_2:85661959-85661978 Msa1085200:intron 40.0%
TTCGAGACCAGTAAATCACT+TGG + chr7_2:85662035-85662054 None:intergenic 40.0%
! CTGCTGTTTGGAAATATGGT+AGG - chr7_2:85662063-85662082 Msa1085200:intron 40.0%
GCTGTTTGGAAATATGGTAG+GGG - chr7_2:85662065-85662084 Msa1085200:intron 40.0%
!! GAAAGTGCAGTTGTTTCTCA+AGG + chr7_2:85662167-85662186 None:intergenic 40.0%
GTATTATACGGGGAAAGTGA+TGG - chr7_2:85662295-85662314 Msa1085200:intron 40.0%
!! AAAGTGATGGGCAGTAGTAA+TGG - chr7_2:85662308-85662327 Msa1085200:intron 40.0%
! TACCAAAATGAGTGGTAGTG+GGG - chr7_2:85662349-85662368 Msa1085200:intron 40.0%
!! GGGAGTAGGAATTAGTTTGT+GGG - chr7_2:85662371-85662390 Msa1085200:intron 40.0%
TGGGAAACGAGAATAAAAGC+AGG - chr7_2:85662390-85662409 Msa1085200:CDS 40.0%
AACGAGAATAAAAGCAGGAG+AGG - chr7_2:85662395-85662414 Msa1085200:CDS 40.0%
AGAATAAAAGCAGGAGAGGA+AGG - chr7_2:85662399-85662418 Msa1085200:CDS 40.0%
GAATAAAAGCAGGAGAGGAA+GGG - chr7_2:85662400-85662419 Msa1085200:CDS 40.0%
GGTGGAACATAGAAGAATTG+AGG - chr7_2:85662421-85662440 Msa1085200:CDS 40.0%
GGAACATAGAAGAATTGAGG+TGG - chr7_2:85662424-85662443 Msa1085200:CDS 40.0%
CTCGGGATATTATAGGGAAT+CGG + chr7_2:85662703-85662722 None:intergenic 40.0%
TGGGGGGAAATGAAAGTTAA+TGG + chr7_2:85662882-85662901 None:intergenic 40.0%
TAAACTGTCCTAAAGCAGTG+GGG + chr7_2:85662900-85662919 None:intergenic 40.0%
AAACTCCTAACGATTGCACT+TGG - chr7_2:85662991-85663010 Msa1085200:CDS 40.0%
GATAACCAAGTGCAATCGTT+AGG + chr7_2:85662999-85663018 None:intergenic 40.0%
AACGATTGCACTTGGTTATC+TGG - chr7_2:85662999-85663018 Msa1085200:CDS 40.0%
GATGACGATGAAAAGCTGAA+TGG - chr7_2:85663056-85663075 Msa1085200:CDS 40.0%
!! GAATGGACTGAGAAAAGAAG+TGG - chr7_2:85663073-85663092 Msa1085200:CDS 40.0%
GAGAAAAGAAGTGGGTGAAA+AGG - chr7_2:85663082-85663101 Msa1085200:CDS 40.0%
TATGGAACTATAAAGCGGGA+AGG - chr7_2:85663180-85663199 Msa1085200:CDS 40.0%
! TGAAGTTTTTGTTGGACTGC+TGG - chr7_2:85663225-85663244 Msa1085200:CDS 40.0%
AGTAACTACGGTACAACAGT+TGG + chr7_2:85663348-85663367 None:intergenic 40.0%
TGGGAAATTCCCAATTCCAT+CGG - chr7_2:85663500-85663519 Msa1085200:intron 40.0%
! TCGGATTTTCCGATGGAATT+GGG + chr7_2:85663512-85663531 None:intergenic 40.0%
! TTCGGATTTTCCGATGGAAT+TGG + chr7_2:85663513-85663532 None:intergenic 40.0%
AAGCTAAGACAAAGAGGAAG+AGG + chr7_2:85663665-85663684 None:intergenic 40.0%
ATCTGTGGATTCCATCTCTA+CGG + chr7_2:85664039-85664058 None:intergenic 40.0%
ATGAGATGGAATTAGTAGCG+TGG + chr7_2:85664079-85664098 None:intergenic 40.0%
GAGATAAAGTAGCATGCACA+TGG - chr7_2:85664199-85664218 Msa1085200:intron 40.0%
ATGCACATGGATCCTATGTT+TGG - chr7_2:85664212-85664231 Msa1085200:intron 40.0%
! CCGAGAGAATAATTTGTGCA+TGG - chr7_2:85664320-85664339 Msa1085200:intron 40.0%
GGTTTGCAGCTCTACAAATA+TGG + chr7_2:85664364-85664383 None:intergenic 40.0%
AGTAGTCACACACACTCACA+CGG - chr7_2:85656815-85656834 Msa1085200:three_prime_UTR 45.0%
!! CTCTCTTCTTAGAGAGCGTT+AGG - chr7_2:85656934-85656953 Msa1085200:three_prime_UTR 45.0%
TCTCTTGTAAAAAGGACCGG+AGG - chr7_2:85657872-85657891 Msa1085200:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG - chr7_2:85657873-85657892 Msa1085200:intron 45.0%
TACAATGTCTCAGAGCTCTG+AGG - chr7_2:85658161-85658180 Msa1085200:intron 45.0%
ACAAGTGAACTTCTCATCCG+AGG + chr7_2:85658274-85658293 None:intergenic 45.0%
AACTCCTGCAACATGCTTCT+GGG - chr7_2:85658337-85658356 Msa1085200:CDS 45.0%
CCATCGGAACCAACTGATAA+CGG - chr7_2:85658459-85658478 Msa1085200:intron 45.0%
! ATGAGCAGTTTGTTTGGCCT+TGG - chr7_2:85658520-85658539 Msa1085200:intron 45.0%
!! CAGTTTGTTTGGCCTTGGAT+TGG - chr7_2:85658525-85658544 Msa1085200:intron 45.0%
TTAGGGATGAGTATAGACGC+AGG - chr7_2:85658616-85658635 Msa1085200:intron 45.0%
TAGGGATGAGTATAGACGCA+GGG - chr7_2:85658617-85658636 Msa1085200:intron 45.0%
!! CACAGAGGATTGACTCGATA+TGG + chr7_2:85658651-85658670 None:intergenic 45.0%
CATATCGAGTCAATCCTCTG+TGG - chr7_2:85658649-85658668 Msa1085200:intron 45.0%
AATCCTCTGTGGAATTTCCG+AGG - chr7_2:85658660-85658679 Msa1085200:intron 45.0%
GCAAGTGCATTATCTAAGCC+GGG + chr7_2:85658726-85658745 None:intergenic 45.0%
GCATATGCATCAGACCATCA+CGG - chr7_2:85658756-85658775 Msa1085200:intron 45.0%
CATATGCATCAGACCATCAC+GGG - chr7_2:85658757-85658776 Msa1085200:intron 45.0%
ATCAGACCATCACGGGAAAA+AGG - chr7_2:85658764-85658783 Msa1085200:intron 45.0%
ACCATCACGGGAAAAAGGAT+TGG - chr7_2:85658769-85658788 Msa1085200:intron 45.0%
! ACCAATCCTTTTTCCCGTGA+TGG + chr7_2:85658773-85658792 None:intergenic 45.0%
GTTAATACAGAGCCGAAGTC+GGG - chr7_2:85658795-85658814 Msa1085200:intron 45.0%
CATGCATAAAGACCCGACTT+CGG + chr7_2:85658810-85658829 None:intergenic 45.0%
GAAGTCGGGTCTTTATGCAT+GGG - chr7_2:85658809-85658828 Msa1085200:intron 45.0%
GCTTGTTCTTCCTGAAGTTC+AGG + chr7_2:85658912-85658931 None:intergenic 45.0%
ATCAGGACTTGTGGTAGTTG+TGG - chr7_2:85659130-85659149 Msa1085200:intron 45.0%
TCAGGACTTGTGGTAGTTGT+GGG - chr7_2:85659131-85659150 Msa1085200:intron 45.0%
TGGTTATACAACTGCCAGTG+TGG - chr7_2:85659243-85659262 Msa1085200:intron 45.0%
TTATACAACTGCCAGTGTGG+TGG - chr7_2:85659246-85659265 Msa1085200:intron 45.0%
ACAATTAAGGGGGATCTGAC+AGG - chr7_2:85659300-85659319 Msa1085200:intron 45.0%
GGAAATAGCCACATACTGCT+AGG - chr7_2:85659326-85659345 Msa1085200:intron 45.0%
GCAATGATCCTAGCAGTATG+TGG + chr7_2:85659337-85659356 None:intergenic 45.0%
GTGCTAAGGATCACTTCCAA+AGG - chr7_2:85659536-85659555 Msa1085200:intron 45.0%
CGAAAAGCTTAAGTCGCAAC+TGG - chr7_2:85659573-85659592 Msa1085200:intron 45.0%
AGAAAAGTGAGCTTGAGTCG+CGG - chr7_2:85659602-85659621 Msa1085200:intron 45.0%
CCAATCATAGTATGCCAGAG+GGG + chr7_2:85659726-85659745 None:intergenic 45.0%
CCCAATCATAGTATGCCAGA+GGG + chr7_2:85659727-85659746 None:intergenic 45.0%
CCCTCTGGCATACTATGATT+GGG - chr7_2:85659724-85659743 Msa1085200:CDS 45.0%
TCCCAATCATAGTATGCCAG+AGG + chr7_2:85659728-85659747 None:intergenic 45.0%
AAATGGCGAACTCCAATGAG+TGG - chr7_2:85660282-85660301 Msa1085200:intron 45.0%
! TTTTCCTCCCTCCAATTTGG+GGG - chr7_2:85660439-85660458 Msa1085200:CDS 45.0%
TTACTCCCATACCCCCAAAT+TGG + chr7_2:85660453-85660472 None:intergenic 45.0%
TTGCTTCAGAAGCTTGCAGA+AGG - chr7_2:85660601-85660620 Msa1085200:intron 45.0%
GAAACTGGCTGAAGATCAGA+AGG - chr7_2:85660729-85660748 Msa1085200:CDS 45.0%
! TGATCAAAAGCGTGCTTGTC+AGG - chr7_2:85660782-85660801 Msa1085200:CDS 45.0%
TTGTCAGGTTCAGAGTAGCA+TGG - chr7_2:85660797-85660816 Msa1085200:intron 45.0%
TCTGCATGCGAAGATGTATC+TGG + chr7_2:85661157-85661176 None:intergenic 45.0%
TACATCTTCGCATGCAGAAG+AGG - chr7_2:85661159-85661178 Msa1085200:intron 45.0%
ACTGTCCAACGTCACTTGAA+AGG - chr7_2:85661453-85661472 Msa1085200:intron 45.0%
! GTGAACCTTTCAAGTGACGT+TGG + chr7_2:85661461-85661480 None:intergenic 45.0%
TCTGTGTTTGAAAGCTCGGA+AGG - chr7_2:85662191-85662210 Msa1085200:intron 45.0%
!! ACCAAAATGAGTGGTAGTGG+GGG - chr7_2:85662350-85662369 Msa1085200:intron 45.0%
! GGGGAGTAGGAATTAGTTTG+TGG - chr7_2:85662370-85662389 Msa1085200:intron 45.0%
AAACTGTCCTAAAGCAGTGG+GGG + chr7_2:85662899-85662918 None:intergenic 45.0%
! TGAAAAGGCATATAGTGCCG+TGG - chr7_2:85663097-85663116 Msa1085200:CDS 45.0%
GAGGTTACATATCTCCCACT+AGG + chr7_2:85663155-85663174 None:intergenic 45.0%
AGGAGAGCAACTTTGCAAGA+AGG - chr7_2:85663200-85663219 Msa1085200:CDS 45.0%
TGCTGGAAACGCAAGAAGAA+AGG - chr7_2:85663242-85663261 Msa1085200:CDS 45.0%
GGCGATGATTAGAATGAGAG+AGG - chr7_2:85663470-85663489 Msa1085200:intron 45.0%
AGAATGAGAGAGGCCTTAAG+TGG - chr7_2:85663480-85663499 Msa1085200:intron 45.0%
GAATGAGAGAGGCCTTAAGT+GGG - chr7_2:85663481-85663500 Msa1085200:intron 45.0%
!! ACTGGTTTCGGATTTTCCGA+TGG + chr7_2:85663519-85663538 None:intergenic 45.0%
ATTCCATCTCTACGGTTGTC+CGG + chr7_2:85664031-85664050 None:intergenic 45.0%
! AATAATTTGTGCATGGCGGC+TGG - chr7_2:85664327-85664346 Msa1085200:intron 45.0%
GAGCTGCAAACCGAAGATTA+AGG - chr7_2:85664372-85664391 Msa1085200:intron 45.0%
!!! TTTATGTAATTTTTAATTTT+TGG - chr7_2:85664132-85664151 Msa1085200:intron 5.0%
! GACAGGATTTAGGGCCTGTT+TGG - chr7_2:85657651-85657670 Msa1085200:intron 50.0%
!! AATGTCTCAGAGCTCTGAGG+AGG - chr7_2:85658164-85658183 Msa1085200:intron 50.0%
GAACTCCTGCAACATGCTTC+TGG - chr7_2:85658336-85658355 Msa1085200:CDS 50.0%
ACTCCTGCAACATGCTTCTG+GGG - chr7_2:85658338-85658357 Msa1085200:CDS 50.0%
! CCGTTATCAGTTGGTTCCGA+TGG + chr7_2:85658462-85658481 None:intergenic 50.0%
GGCTAGTGGTTCCAAGCTTA+GGG - chr7_2:85658599-85658618 Msa1085200:intron 50.0%
AGGGATGAGTATAGACGCAG+GGG - chr7_2:85658618-85658637 Msa1085200:intron 50.0%
TGACCTCGGAAATTCCACAG+AGG + chr7_2:85658666-85658685 None:intergenic 50.0%
TGGAATTTCCGAGGTCACTC+TGG - chr7_2:85658669-85658688 Msa1085200:intron 50.0%
CGAAGTCGGGTCTTTATGCA+TGG - chr7_2:85658808-85658827 Msa1085200:intron 50.0%
GGAAGAACAAGCTCGAAAGC+AGG - chr7_2:85658920-85658939 Msa1085200:intron 50.0%
! TGTGGTGGTTTCTGGACCAA+TGG - chr7_2:85659261-85659280 Msa1085200:intron 50.0%
! GTGGTGGTTTCTGGACCAAT+GGG - chr7_2:85659262-85659281 Msa1085200:intron 50.0%
TGAGTCGCGGAGAATCACAT+TGG - chr7_2:85659615-85659634 Msa1085200:intron 50.0%
GTTGCTAGAAGAGATGGAGG+AGG - chr7_2:85659675-85659694 Msa1085200:CDS 50.0%
! GATTTTTGCTCCATCCCCTC+TGG - chr7_2:85659709-85659728 Msa1085200:CDS 50.0%
TCATAGTATGCCAGAGGGGA+TGG + chr7_2:85659722-85659741 None:intergenic 50.0%
CCCCTCTGGCATACTATGAT+TGG - chr7_2:85659723-85659742 Msa1085200:CDS 50.0%
TCTGGAAAGAGTCGGAAGAC+TGG - chr7_2:85659983-85660002 Msa1085200:intron 50.0%
! TCCCTCCAATTTGGGGGTAT+GGG - chr7_2:85660445-85660464 Msa1085200:CDS 50.0%
TCCCATACCCCCAAATTGGA+GGG + chr7_2:85660449-85660468 None:intergenic 50.0%
CTCTCTTCAGATGGCTTCTC+TGG - chr7_2:85660678-85660697 Msa1085200:intron 50.0%
GCATATGGGTTTGAGGGAGA+AGG - chr7_2:85661016-85661035 Msa1085200:intron 50.0%
AGAATGGGGGAACTTGACAC+TGG - chr7_2:85661660-85661679 Msa1085200:intron 50.0%
!! CCAAAATGAGTGGTAGTGGG+GGG - chr7_2:85662351-85662370 Msa1085200:intron 50.0%
TAAAAGCAGGAGAGGAAGGG+TGG - chr7_2:85662403-85662422 Msa1085200:CDS 50.0%
TCATTTCCCCCCACTGCTTT+AGG - chr7_2:85662889-85662908 Msa1085200:CDS 50.0%
AACTGTCCTAAAGCAGTGGG+GGG + chr7_2:85662898-85662917 None:intergenic 50.0%
! AAAGGCATATAGTGCCGTGG+TGG - chr7_2:85663100-85663119 Msa1085200:CDS 50.0%
TGCCGTGGTGGCATCTTTAA+CGG - chr7_2:85663112-85663131 Msa1085200:CDS 50.0%
CTCCGTTAAAGATGCCACCA+CGG + chr7_2:85663117-85663136 None:intergenic 50.0%
CAAAGCCAAACCCTTTGGTG+GGG + chr7_2:85663614-85663633 None:intergenic 50.0%
CCAAAGCCAAACCCTTTGGT+GGG + chr7_2:85663615-85663634 None:intergenic 50.0%
ACCAAAGCCAAACCCTTTGG+TGG + chr7_2:85663616-85663635 None:intergenic 50.0%
GACACCAAAGCCAAACCCTT+TGG + chr7_2:85663619-85663638 None:intergenic 50.0%
TGTTGAAATTGAGCAGCGGC+CGG - chr7_2:85664009-85664028 Msa1085200:intron 50.0%
!! CTGCAACATGCTTCTGGGGT+GGG - chr7_2:85658342-85658361 Msa1085200:CDS 55.0%
CCATCTTGTGCCCTGCTAGT+GGG + chr7_2:85658567-85658586 None:intergenic 55.0%
CCACTAGCAGGGCACAAGAT+GGG - chr7_2:85658565-85658584 Msa1085200:intron 55.0%
! CACAAGATGGGCGTGCTGTT+GGG - chr7_2:85658577-85658596 Msa1085200:intron 55.0%
! ACAAGATGGGCGTGCTGTTG+GGG - chr7_2:85658578-85658597 Msa1085200:intron 55.0%
! GGGCTAGTGGTTCCAAGCTT+AGG - chr7_2:85658598-85658617 Msa1085200:intron 55.0%
GCAACTTGCAACTGGCGCTT+TGG - chr7_2:85659223-85659242 Msa1085200:intron 55.0%
ACTGCCAGTGTGGTGGTTTC+TGG - chr7_2:85659253-85659272 Msa1085200:intron 55.0%
TGGTCCAGAAACCACCACAC+TGG + chr7_2:85659260-85659279 None:intergenic 55.0%
TAAGGGGGATCTGACAGGTC+CGG - chr7_2:85659305-85659324 Msa1085200:intron 55.0%
CACAAGTGACGTGGAACGGA+TGG - chr7_2:85660224-85660243 Msa1085200:intron 55.0%
CATACCCCCAAATTGGAGGG+AGG + chr7_2:85660446-85660465 None:intergenic 55.0%
CTCCCTCCAATTTGGGGGTA+TGG - chr7_2:85660444-85660463 Msa1085200:CDS 55.0%
CTCCCATACCCCCAAATTGG+AGG + chr7_2:85660450-85660469 None:intergenic 55.0%
ATGACCAGACAGCCAAGCGT+AGG - chr7_2:85662104-85662123 Msa1085200:intron 55.0%
! CCCCCCACTACCACTCATTT+TGG + chr7_2:85662354-85662373 None:intergenic 55.0%
AACCCTTTGGTGGGGTGTGA+CGG + chr7_2:85663606-85663625 None:intergenic 55.0%
TCACACCCCACCAAAGGGTT+TGG - chr7_2:85663606-85663625 Msa1085200:intron 55.0%
! CCCACCAAAGGGTTTGGCTT+TGG - chr7_2:85663612-85663631 Msa1085200:intron 55.0%
! CCACCCCAGAAGCATGTTGC+AGG + chr7_2:85658344-85658363 None:intergenic 60.0%
! CCTGCAACATGCTTCTGGGG+TGG - chr7_2:85658341-85658360 Msa1085200:CDS 60.0%
CCCACTAGCAGGGCACAAGA+TGG - chr7_2:85658564-85658583 Msa1085200:intron 60.0%
CCCATCTTGTGCCCTGCTAG+TGG + chr7_2:85658568-85658587 None:intergenic 60.0%
GCACAAGATGGGCGTGCTGT+TGG - chr7_2:85658576-85658595 Msa1085200:intron 60.0%
CAGTTACTGGCGCCTACGCT+TGG + chr7_2:85662119-85662138 None:intergenic 60.0%
!! TGAGTGGTAGTGGGGGGAGT+AGG - chr7_2:85662357-85662376 Msa1085200:intron 60.0%
TGCCGTCACACCCCACCAAA+GGG - chr7_2:85663601-85663620 Msa1085200:intron 60.0%
GGGCGGTACCAGAGTGACCT+CGG + chr7_2:85658680-85658699 None:intergenic 65.0%
GTGCCGTCACACCCCACCAA+AGG - chr7_2:85663600-85663619 Msa1085200:intron 65.0%
CGGCCGGACAACCGTAGAGA+TGG - chr7_2:85664025-85664044 Msa1085200:intron 65.0%
! GGGCGTGCTGTTGGGGCTAG+TGG - chr7_2:85658585-85658604 Msa1085200:intron 70.0%
GGCGCCTACGCTTGGCTGTC+TGG + chr7_2:85662111-85662130 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 85656796 85664669 85656796 ID=Msa1085200;Name=Msa1085200
chr7_2 mRNA 85656796 85664669 85656796 ID=Msa1085200-mRNA-1;Parent=Msa1085200;Name=Msa1085200-mRNA-1;_AED=0.08;_eAED=0.08;_QI=240|1|1|1|0.71|0.62|8|372|640
chr7_2 exon 85656796 85657165 85656796 ID=Msa1085200-mRNA-1:exon:23164;Parent=Msa1085200-mRNA-1
chr7_2 exon 85658189 85658421 85658189 ID=Msa1085200-mRNA-1:exon:23163;Parent=Msa1085200-mRNA-1
chr7_2 exon 85659638 85659847 85659638 ID=Msa1085200-mRNA-1:exon:23162;Parent=Msa1085200-mRNA-1
chr7_2 exon 85660326 85660613 85660326 ID=Msa1085200-mRNA-1:exon:23161;Parent=Msa1085200-mRNA-1
chr7_2 exon 85660715 85660804 85660715 ID=Msa1085200-mRNA-1:exon:23160;Parent=Msa1085200-mRNA-1
chr7_2 exon 85661769 85661950 85661769 ID=Msa1085200-mRNA-1:exon:23159;Parent=Msa1085200-mRNA-1
chr7_2 exon 85662379 85663327 85662379 ID=Msa1085200-mRNA-1:exon:23158;Parent=Msa1085200-mRNA-1
chr7_2 exon 85664457 85664669 85664457 ID=Msa1085200-mRNA-1:exon:23157;Parent=Msa1085200-mRNA-1
chr7_2 five_prime_UTR 85664457 85664669 85664457 ID=Msa1085200-mRNA-1:five_prime_utr;Parent=Msa1085200-mRNA-1
chr7_2 five_prime_UTR 85663301 85663327 85663301 ID=Msa1085200-mRNA-1:five_prime_utr;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85662379 85663300 85662379 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85661769 85661950 85661769 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85660715 85660804 85660715 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85660326 85660613 85660326 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85659638 85659847 85659638 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 CDS 85658191 85658421 85658191 ID=Msa1085200-mRNA-1:cds;Parent=Msa1085200-mRNA-1
chr7_2 three_prime_UTR 85658189 85658190 85658189 ID=Msa1085200-mRNA-1:three_prime_utr;Parent=Msa1085200-mRNA-1
chr7_2 three_prime_UTR 85656796 85657165 85656796 ID=Msa1085200-mRNA-1:three_prime_utr;Parent=Msa1085200-mRNA-1
Gene Sequence

>Msa1085200

ATGTCTCAGAGCTCTGAGGAGGATACTGATATAAGTGATTCTGAGATAAGTGAGTATGAGGAAAAATGTTATGAAGAACTGAAAAGTGGAAGTCAGAATGTGAAAACCTCGGATGAGAAGTTCACTTGTCCATACTGTCCTAAGAAAAGAAAACGGGATTATTTGTACAACGAACTCCTGCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAGAAGAGAAAGCCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTTATGAATATAGATACTCCATCGGAACCAACTGATAACGGTGCTGATAACGGTGACACAGACACTTCTATTGATTCTGATGAGCAGTTTGTTTGGCCTTGGATTGGAGTTATAGTTAATATTCCCACTAGCAGGGCACAAGATGGGCGTGCTGTTGGGGCTAGTGGTTCCAAGCTTAGGGATGAGTATAGACGCAGGGGTTTCAATCCATATCGAGTCAATCCTCTGTGGAATTTCCGAGGTCACTCTGGTACCGCCCTTGTAGAATTCTATAAAGACTGGCCCGGCTTAGATAATGCACTTGCATTTGAAAAAGCATATGCATCAGACCATCACGGGAAAAAGGATTGGTTTGTTAATACAGAGCCGAAGTCGGGTCTTTATGCATGGGTTGCCCGAGCTGATGACTACAAAAAGAACAATATCATTGGTGAATATCTGCGAAAGATGGGCGATATCAAAACCATACCTGAACTTCAGGAAGAACAAGCTCGAAAGCAGGATAAACTCGTGTCCAATTTGACCAACATTATTGAGGTCAAAAACAAGCACTTAATTGAGATAGAAGCAAGATGCACTGAGACTACAGCCAAAATGAATTCTGCTATGACAGAAAAAGATCAGCTCATTCAAGCTTATAATGAAGAGATAAAGAAAATACAGTCAAGTGCTAAGGATCACTTCCAAAGGATTTTTAATGATCACGAAAAGCTTAAGTCGCAACTGGAAACTCAGAAAAGTGAGCTTGAGTCGCGGAGAATCACATTGGAAAAGCGTGAAGCACATAATGAAAGTGAAAGAAGAAAGTTGCTAGAAGAGATGGAGGAGAATGCAACGAGAAATAGCTCTCTTCAGATGGCTTCTCTGGAGCAACAGAAAGCAGATATAAATGTTATGAAACTGGCTGAAGATCAGAAGAAACAAAAAGAACAGCTCCATGCTAAAATCATTCAGCTTGAAAGACAACTGGATATGAAACAAAAGCTGGAACTGGAGATTCAGCAACTAAAAGGATCACTAAGTGTGTTGAAGCACATAGAAGATGACGAAGATGTAGAAGTTTTGAAGAAGGTAGATGATTTGCATATGGGTTTGAGGGAGAAGGAACAGTCTCTTCAAGACTTAGATGCACTGAACCAAACACTAATCATCAAGGAGCGTAAGAGTAACGATGAACTGCAGGATGCTCGAAAAGAATTGATTAATGGCATTAAAGATATAGGTACTCGAGTCCATATTGGTGTGAAGAGAATGGGGGAACTTGACACTGGACCGTTCCTTGAAGCTATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGACAAAGCTTCAGAACTATGTTCATTGTGGGAAGAGTATCTAAAAGACCCAGATTGGCATCCATTCAAAGTTGTCATGATTGAAGGGAAAGAAAAGGAAATTATTAAAGATGACGATGAAAAGCTGAATGGACTGAGAAAAGAAGTGGGTGAAAAGGCATATAGTGCCGTGGTGGCATCTTTAACGGAGATTAATGAATATAATCCTAGTGGGAGATATGTAACCTCAGAGTTATGGAACTATAAAGCGGGAAGGAGAGCAACTTTGCAAGAAGGAGTGAAGTTTTTGTTGGACTGCTGGAAACGCAAGAAGAAAGGAATGTTGTGA

Protein sequence

>Msa1085200

MSQSSEEDTDISDSEISEYEEKCYEELKSGSQNVKTSDEKFTCPYCPKKRKRDYLYNELLQHASGVGQSSSQKRKPREKATHLALVKYLEKDLMNIDTPSEPTDNGADNGDTDTSIDSDEQFVWPWIGVIVNIPTSRAQDGRAVGASGSKLRDEYRRRGFNPYRVNPLWNFRGHSGTALVEFYKDWPGLDNALAFEKAYASDHHGKKDWFVNTEPKSGLYAWVARADDYKKNNIIGEYLRKMGDIKTIPELQEEQARKQDKLVSNLTNIIEVKNKHLIEIEARCTETTAKMNSAMTEKDQLIQAYNEEIKKIQSSAKDHFQRIFNDHEKLKSQLETQKSELESRRITLEKREAHNESERRKLLEEMEENATRNSSLQMASLEQQKADINVMKLAEDQKKQKEQLHAKIIQLERQLDMKQKLELEIQQLKGSLSVLKHIEDDEDVEVLKKVDDLHMGLREKEQSLQDLDALNQTLIIKERKSNDELQDARKELINGIKDIGTRVHIGVKRMGELDTGPFLEAMKKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMIEGKEKEIIKDDDEKLNGLRKEVGEKAYSAVVASLTEINEYNPSGRYVTSELWNYKAGRRATLQEGVKFLLDCWKRKKKGML*