AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0410650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410650 MtrunA17_Chr3g0111661 97.969 640 13 0 1 640 1 640 0.0 1290
Msa0410650 MtrunA17_Chr5g0435301 64.319 653 214 6 5 640 472 1122 0.0 832
Msa0410650 MtrunA17_Chr5g0435301 57.407 108 45 1 4 110 231 338 1.59e-30 128
Msa0410650 MtrunA17_Chr5g0435301 50.000 138 52 4 1 127 117 248 1.60e-29 125
Msa0410650 MtrunA17_Chr5g0435301 52.542 118 53 2 2 116 350 467 3.03e-29 124
Msa0410650 MtrunA17_Chr5g0435301 55.963 109 46 2 1 108 1 108 3.76e-28 120
Msa0410650 MtrunA17_Chr4g0001231 42.926 622 328 10 22 637 22 622 7.50e-162 478
Msa0410650 MtrunA17_Chr4g0074301 42.173 626 337 8 19 637 19 626 3.19e-160 474
Msa0410650 MtrunA17_Chr4g0070931 42.357 628 333 9 19 637 19 626 2.65e-158 469
Msa0410650 MtrunA17_Chr2g0328251 37.861 692 350 14 13 636 10 689 4.29e-135 411
Msa0410650 MtrunA17_Chr2g0328241 39.510 653 333 11 34 636 33 673 7.90e-129 395
Msa0410650 MtrunA17_Chr4g0024031 34.925 670 332 13 34 636 33 665 6.96e-113 353
Msa0410650 MtrunA17_Chr2g0327251 38.645 546 265 8 110 636 69 563 1.34e-104 328
Msa0410650 MtrunA17_Chr3g0111741 58.879 214 87 1 425 637 123 336 2.64e-72 237
Msa0410650 MtrunA17_Chr4g0071151 50.579 259 97 4 398 637 3 249 3.97e-71 230
Msa0410650 MtrunA17_Chr2g0328231 38.220 382 172 7 282 632 9 357 4.35e-63 213
Msa0410650 MtrunA17_Chr3g0111731 54.464 224 87 3 417 637 1 212 2.89e-62 206
Msa0410650 MtrunA17_Chr4g0074271 34.646 381 214 5 19 398 36 382 3.20e-59 205
Msa0410650 MtrunA17_Chr4g0074271 48.529 68 35 0 563 630 381 448 2.96e-14 75.5
Msa0410650 MtrunA17_Chr3g0111691 55.556 72 32 0 566 637 17 88 7.24e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410650 AT3G48670.2 55.732 628 272 3 16 639 21 646 0.0 704
Msa0410650 AT3G48670.1 55.732 628 272 3 16 639 21 646 0.0 704
Msa0410650 AT3G48670.3 55.732 628 272 3 16 639 21 646 0.0 704
Msa0410650 AT3G12550.5 50.786 636 297 7 13 636 2 633 0.0 624
Msa0410650 AT3G12550.4 50.706 637 297 7 13 636 2 634 0.0 624
Msa0410650 AT3G12550.2 50.706 637 297 7 13 636 2 634 0.0 624
Msa0410650 AT3G12550.1 50.706 637 297 7 13 636 2 634 0.0 624
Msa0410650 AT3G12550.3 49.647 566 270 6 13 567 2 563 0.0 542
Msa0410650 AT1G15910.1 39.641 613 361 7 18 628 17 622 8.93e-144 432
Msa0410650 AT4G00380.1 40.033 612 359 6 19 628 18 623 8.46e-143 429
Msa0410650 AT4G00380.3 40.033 612 359 6 19 628 18 623 8.46e-143 429
Msa0410650 AT1G13790.2 41.822 538 294 5 99 632 204 726 1.35e-136 417
Msa0410650 AT1G13790.2 46.341 82 43 1 12 93 3 83 1.13e-14 78.2
Msa0410650 AT1G13790.1 41.822 538 294 5 99 632 204 726 1.35e-136 417
Msa0410650 AT1G13790.1 46.341 82 43 1 12 93 3 83 1.13e-14 78.2
Msa0410650 AT4G00380.2 37.908 612 344 6 19 628 18 595 4.21e-132 401
Msa0410650 AT1G80790.1 39.739 614 356 11 19 628 19 622 3.24e-130 397
Msa0410650 AT1G80790.2 39.739 614 356 11 19 628 19 622 3.24e-130 397
Msa0410650 AT5G59390.2 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa0410650 AT5G59390.4 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa0410650 AT5G59390.3 38.686 548 319 6 89 629 1 538 2.46e-126 384
Msa0410650 AT5G59390.1 38.336 553 319 7 89 629 1 543 9.89e-124 378
Msa0410650 AT5G59390.5 38.336 553 319 7 89 629 1 543 9.89e-124 378
Msa0410650 AT4G01780.1 41.860 516 172 7 128 639 80 471 2.51e-120 366
Msa0410650 AT4G01180.1 37.338 541 300 8 108 629 18 538 1.43e-113 352
Msa0410650 AT1G80790.3 37.037 459 277 9 19 475 19 467 1.21e-83 271
Msa0410650 AT3G29375.3 40.704 199 109 3 442 636 33 226 1.99e-37 139
Msa0410650 AT3G29375.1 41.206 199 108 3 442 636 156 349 4.80e-36 139
Msa0410650 AT3G29375.2 39.316 117 65 2 442 557 33 144 1.09e-15 75.9

Find 159 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTTTAGTGAAATATT+TGG 0.147850 3_2:-52327258 Msa0410650:CDS
CTCAATAATGTTGGTCAAAT+TGG 0.163099 3_2:+52326713 None:intergenic
GATGAGGTTCTCAAAATATT+AGG 0.182802 3_2:+52328778 None:intergenic
CACAAGATGGGCGTGCTGTT+GGG 0.229647 3_2:-52327091 Msa0410650:CDS
GAACTCCTGCAACATGCTTC+TGG 0.241965 3_2:-52327332 Msa0410650:CDS
GGGCTAGTGGTTCCAAGCTT+AGG 0.267461 3_2:-52327070 Msa0410650:CDS
TGTCATAGCAGAATTCATTT+TGG 0.267704 3_2:+52326638 None:intergenic
CACAGAGGATTGACTCGATA+TGG 0.273116 3_2:+52327020 None:intergenic
GGTTTGCAGCTCTACAAATA+TGG 0.283988 3_2:+52321307 None:intergenic
CTCTCTTCAGATGGCTTCTC+TGG 0.291092 3_2:-52324990 Msa0410650:CDS
ACTTTGAATGGATGCCAATC+TGG 0.306475 3_2:+52323888 None:intergenic
AATTGGAAGTAGAAGGAAAA+TGG 0.320820 3_2:+52328690 None:intergenic
CCATTCTCTTCACACCAATA+TGG 0.337100 3_2:+52324024 None:intergenic
ATGAGGTTCTCAAAATATTA+GGG 0.340733 3_2:+52328779 None:intergenic
ATCAGACCATCACGGGAAAA+AGG 0.341544 3_2:-52326904 Msa0410650:CDS
CTGGAGATTCAGCAACTAAA+AGG 0.346899 3_2:-52324744 Msa0410650:CDS
ATGAGCAGTTTGTTTGGCCT+TGG 0.350970 3_2:-52327148 Msa0410650:CDS
TTGTATTTCAGGTGGTATAA+AGG 0.352840 3_2:-52327541 Msa0410650:intron
AACTCCTGCAACATGCTTCT+GGG 0.355105 3_2:-52327331 Msa0410650:CDS
AATTTATGATCATGTTAAAC+TGG 0.362350 3_2:-52321256 Msa0410650:three_prime_UTR
GCTTGTTCTTCCTGAAGTTC+AGG 0.365310 3_2:+52326759 None:intergenic
CAAAACCATACCTGAACTTC+AGG 0.366653 3_2:-52326769 Msa0410650:CDS
GCACAAGATGGGCGTGCTGT+TGG 0.374639 3_2:-52327092 Msa0410650:CDS
GAAGGTAGATGATTTGCATA+TGG 0.376492 3_2:-52324667 Msa0410650:CDS
AGATATAAATGTTATGAAAC+TGG 0.377193 3_2:-52324954 Msa0410650:CDS
GGCTAGTGGTTCCAAGCTTA+GGG 0.377913 3_2:-52327069 Msa0410650:CDS
AAGAGAAAAGGCTACTCATT+TGG 0.397330 3_2:-52327276 Msa0410650:CDS
CCACCCCAGAAGCATGTTGC+AGG 0.399060 3_2:+52327327 None:intergenic
TGATTTGCATATGGGTTTGA+GGG 0.400254 3_2:-52324658 Msa0410650:CDS
GCTCCTTGATGATTAGTGTT+TGG 0.402887 3_2:+52324598 None:intergenic
ATTCTGATGAGCAGTTTGTT+TGG 0.414097 3_2:-52327154 Msa0410650:CDS
GCTCTCTAAGAAGAGAGTTT+AGG 0.420490 3_2:+52328740 None:intergenic
TTCAAAGTTGTCATGATTGA+AGG 0.425294 3_2:-52323873 Msa0410650:CDS
TGCCGTGGTGGCATCTTTAA+CGG 0.426193 3_2:-52322556 Msa0410650:CDS
ATGATTTGCATATGGGTTTG+AGG 0.426345 3_2:-52324659 Msa0410650:CDS
TTGTAGGGCATTAAAGATAT+AGG 0.427673 3_2:-52324056 Msa0410650:intron
TCAATCATGACAACTTTGAA+TGG 0.430213 3_2:+52323876 None:intergenic
TAGTTAATATTCCCACTAGC+AGG 0.431817 3_2:-52327115 Msa0410650:CDS
GAAGAGAAAGCCAAGAGAAA+AGG 0.432830 3_2:-52327288 Msa0410650:CDS
CATTCAGCTTGAAAGACAAC+TGG 0.434076 3_2:-52324787 Msa0410650:CDS
ACAAGATGGGCGTGCTGTTG+GGG 0.435201 3_2:-52327090 Msa0410650:CDS
CGAAAAGCTTAAGTCGCAAC+TGG 0.436034 3_2:-52326095 Msa0410650:CDS
CAGTTTGTTTGGCCTTGGAT+TGG 0.436617 3_2:-52327143 Msa0410650:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.437782 3_2:-52327252 Msa0410650:CDS
CTCTCTTCTTAGAGAGCGTT+AGG 0.440038 3_2:-52328734 Msa0410650:five_prime_UTR
TTATGCACAACCTTAATCTT+CGG 0.440589 3_2:+52321286 None:intergenic
TATGAAACAAAAGCTGGAAC+TGG 0.443041 3_2:-52324763 Msa0410650:CDS
CATATTGGTGTGAAGAGAAT+GGG 0.444902 3_2:-52324023 Msa0410650:CDS
AAGAAAGTTGCTAGAAGAGA+TGG 0.445164 3_2:-52325999 Msa0410650:CDS
GATATGTAACCTCAGAGTTA+TGG 0.447168 3_2:-52322506 Msa0410650:CDS
CATTCCCCTAGTGTTGTTTG+TGG 0.454225 3_2:-52328884 None:intergenic
GAGCTGCAAACCGAAGATTA+AGG 0.454519 3_2:-52321296 Msa0410650:three_prime_UTR
AAGGTAGATGATTTGCATAT+GGG 0.455418 3_2:-52324666 Msa0410650:CDS
CTGCAACATGCTTCTGGGGT+GGG 0.458226 3_2:-52327326 Msa0410650:CDS
TTCTTCCTGAAGTTCAGGTA+TGG 0.459017 3_2:+52326764 None:intergenic
CCCATCTTGTGCCCTGCTAG+TGG 0.460385 3_2:+52327103 None:intergenic
AATAATTTGTGCATGGCGGC+TGG 0.461442 3_2:-52321341 Msa0410650:three_prime_UTR
TTCAGAACTATGTTCATTGT+GGG 0.462202 3_2:-52323928 Msa0410650:CDS
CCATATTGGTGTGAAGAGAA+TGG 0.462918 3_2:-52324024 Msa0410650:CDS
TGGTGAATATCTGCGAAAGA+TGG 0.472008 3_2:-52326799 Msa0410650:CDS
CAATTTGACCAACATTATTG+AGG 0.472553 3_2:-52326712 Msa0410650:CDS
AAGTAGAAGGAAAATGGATC+TGG 0.472707 3_2:+52328696 None:intergenic
GGGCGTGCTGTTGGGGCTAG+TGG 0.472779 3_2:-52327083 Msa0410650:CDS
CCTTTGTATTATCTCTAGCA+TGG 0.473959 3_2:-52321177 Msa0410650:three_prime_UTR
TGCAAGTGCATTATCTAAGC+CGG 0.475800 3_2:+52326944 None:intergenic
CGAAGTCGGGTCTTTATGCA+TGG 0.478600 3_2:-52326860 Msa0410650:CDS
CTCATTCAAGCTTATAATGA+AGG 0.478873 3_2:-52326603 Msa0410650:intron
AGTATCTAAAAGACCCAGAT+TGG 0.483392 3_2:-52323902 Msa0410650:CDS
GTTAATACAGAGCCGAAGTC+GGG 0.485220 3_2:-52326873 Msa0410650:CDS
GTTGCTAGAAGAGATGGAGG+AGG 0.492303 3_2:-52325993 Msa0410650:intron
CTGTCCTAAGAAAAGAAAAC+GGG 0.493609 3_2:-52327369 Msa0410650:CDS
CCTGCAACATGCTTCTGGGG+TGG 0.494090 3_2:-52327327 Msa0410650:CDS
AAAGTTGCTAGAAGAGATGG+AGG 0.496394 3_2:-52325996 Msa0410650:CDS
ACTGTCCTAAGAAAAGAAAA+CGG 0.497895 3_2:-52327370 Msa0410650:CDS
CCGTTATCAGTTGGTTCCGA+TGG 0.498274 3_2:+52327209 None:intergenic
TGTTATGAAGAACTGAAAAG+TGG 0.504332 3_2:-52327437 Msa0410650:CDS
CTTCAGAACTATGTTCATTG+TGG 0.507293 3_2:-52323929 Msa0410650:CDS
CTTTGAATGGATGCCAATCT+GGG 0.508070 3_2:+52323889 None:intergenic
GAGAAAAGAAGTGGGTGAAA+AGG 0.509744 3_2:-52322586 Msa0410650:CDS
TTCTGAGATAAGTGAGTATG+AGG 0.511412 3_2:-52327465 Msa0410650:CDS
TTCTTCATAGCTTCAAGGAA+CGG 0.513496 3_2:+52323984 None:intergenic
CATGATTGAAGGGAAAGAAA+AGG 0.514995 3_2:-52323862 Msa0410650:intron
TGCTGGAAACGCAAGAAGAA+AGG 0.516899 3_2:-52322426 Msa0410650:CDS
TCTATACTCATCCCTAAGCT+TGG 0.519914 3_2:+52327058 None:intergenic
TGGAATTTCCGAGGTCACTC+TGG 0.520278 3_2:-52326999 Msa0410650:CDS
GCATATGGGTTTGAGGGAGA+AGG 0.522543 3_2:-52324652 Msa0410650:CDS
CCATCGGAACCAACTGATAA+CGG 0.523052 3_2:-52327209 Msa0410650:CDS
ACTGATAACGGTGCTGATAA+CGG 0.523153 3_2:-52327197 Msa0410650:CDS
TATGAAGAAAAGATATAATG+AGG 0.526790 3_2:-52323970 Msa0410650:CDS
CCATGCACAAATTATTCTCT+CGG 0.526826 3_2:+52321348 None:intergenic
CCACTAGCAGGGCACAAGAT+GGG 0.531363 3_2:-52327103 Msa0410650:CDS
GGTGAATATCTGCGAAAGAT+GGG 0.536287 3_2:-52326798 Msa0410650:CDS
CCATCTTGTGCCCTGCTAGT+GGG 0.536337 3_2:+52327104 None:intergenic
ATAGGTACTCGAGTCCATAT+TGG 0.536518 3_2:-52324038 Msa0410650:CDS
ATTAATGAATATAATCCTAG+TGG 0.537739 3_2:-52322531 Msa0410650:CDS
CATATGCATCAGACCATCAC+GGG 0.537748 3_2:-52326911 Msa0410650:CDS
TCAAAGTTGTCATGATTGAA+GGG 0.539832 3_2:-52323872 Msa0410650:CDS
CCCACTAGCAGGGCACAAGA+TGG 0.540992 3_2:-52327104 Msa0410650:CDS
GAGAAATAGCTCTCTTCAGA+TGG 0.542142 3_2:-52324999 Msa0410650:CDS
GAAAATACAGTCAAGTGCTA+AGG 0.543949 3_2:-52326146 Msa0410650:CDS
TTGTAGAATTCTATAAAGAC+TGG 0.550308 3_2:-52326968 Msa0410650:CDS
TGTTAATACAGAGCCGAAGT+CGG 0.559361 3_2:-52326874 Msa0410650:CDS
GCAAGTGCATTATCTAAGCC+GGG 0.559583 3_2:+52326945 None:intergenic
TAAGAGTAACGATGAACTGC+AGG 0.562042 3_2:-52324574 Msa0410650:CDS
ACTGGATATGAAACAAAAGC+TGG 0.563267 3_2:-52324769 Msa0410650:CDS
TTTCAGGTGGTATAAAGGCT+AGG 0.564453 3_2:-52327536 Msa0410650:intron
TACAAAAGCAGTTTGAGTCT+CGG 0.566152 3_2:+52321207 None:intergenic
GAAACTGGCTGAAGATCAGA+AGG 0.567201 3_2:-52324939 Msa0410650:intron
GAACCAAACACTAATCATCA+AGG 0.567695 3_2:-52324601 Msa0410650:CDS
GGAAGAACAAGCTCGAAAGC+AGG 0.567972 3_2:-52326748 Msa0410650:CDS
AGGAGAGCAACTTTGCAAGA+AGG 0.568496 3_2:-52322468 Msa0410650:CDS
AAATATTAGGGATTTGACAA+TGG 0.572482 3_2:+52328791 None:intergenic
AGTTAATATTCCCACTAGCA+GGG 0.577595 3_2:-52327114 Msa0410650:CDS
GAATTCTATAAAGACTGGCC+CGG 0.577874 3_2:-52326963 Msa0410650:CDS
GAAGTCGGGTCTTTATGCAT+GGG 0.578902 3_2:-52326859 Msa0410650:CDS
GATGACGATGAAAAGCTGAA+TGG 0.580152 3_2:-52322612 Msa0410650:CDS
CTTTGTATTATCTCTAGCAT+GGG 0.580952 3_2:-52321176 Msa0410650:three_prime_UTR
TTATCAGCACCGTTATCAGT+TGG 0.584851 3_2:+52327200 None:intergenic
CCGAGAGAATAATTTGTGCA+TGG 0.590689 3_2:-52321348 Msa0410650:three_prime_UTR
GAGTTATGGAACTATAAAGC+GGG 0.593653 3_2:-52322492 Msa0410650:CDS
GAAGAAAAGATATAATGAGG+AGG 0.605682 3_2:-52323967 Msa0410650:CDS
TTAACTATAACTCCAATCCA+AGG 0.605894 3_2:+52327131 None:intergenic
AGAAGAAAGGAATGTTGTGA+AGG 0.608106 3_2:-52322413 Msa0410650:intron
TAGGGATGAGTATAGACGCA+GGG 0.612645 3_2:-52327051 Msa0410650:CDS
TTTATAGTTCCATAACTCTG+AGG 0.618749 3_2:+52322497 None:intergenic
AGTCTTTATAGAATTCTACA+AGG 0.623481 3_2:+52326970 None:intergenic
GGGCGGTACCAGAGTGACCT+CGG 0.624880 3_2:+52326991 None:intergenic
TTAATGAATATAATCCTAGT+GGG 0.627933 3_2:-52322530 Msa0410650:CDS
TTTATAGAATTCTACAAGGG+CGG 0.629108 3_2:+52326974 None:intergenic
ACTCCTGCAACATGCTTCTG+GGG 0.631536 3_2:-52327330 Msa0410650:CDS
TATGAATATAGATACTCCAT+CGG 0.631604 3_2:-52327225 Msa0410650:CDS
GAGGTTACATATCTCCCACT+AGG 0.640674 3_2:+52322516 None:intergenic
TATGGAACTATAAAGCGGGA+AGG 0.642700 3_2:-52322488 Msa0410650:CDS
GTGCTAAGGATCACTTCCAA+AGG 0.644535 3_2:-52326132 Msa0410650:CDS
CATGCATAAAGACCCGACTT+CGG 0.645714 3_2:+52326861 None:intergenic
GCATATGCATCAGACCATCA+CGG 0.645968 3_2:-52326912 Msa0410650:CDS
ATATTGGTGTGAAGAGAATG+GGG 0.648291 3_2:-52324022 Msa0410650:CDS
TGAGTCGCGGAGAATCACAT+TGG 0.648552 3_2:-52326053 Msa0410650:CDS
CTCCGTTAAAGATGCCACCA+CGG 0.652925 3_2:+52322554 None:intergenic
AATCCTCTGTGGAATTTCCG+AGG 0.653346 3_2:-52327008 Msa0410650:CDS
GAATGGACTGAGAAAAGAAG+TGG 0.656264 3_2:-52322595 Msa0410650:CDS
AATGTCTCAGAGCTCTGAGG+AGG 0.657434 3_2:-52327504 Msa0410650:CDS
AGAGTTATGGAACTATAAAG+CGG 0.659050 3_2:-52322493 Msa0410650:CDS
ACAAGTGAACTTCTCATCCG+AGG 0.660081 3_2:+52327397 None:intergenic
TTAGGGATGAGTATAGACGC+AGG 0.666699 3_2:-52327052 Msa0410650:CDS
AAGTCAGAATGTGAAAACCT+CGG 0.672200 3_2:-52327414 Msa0410650:CDS
AGTAGTCACACACACTCACA+CGG 0.674976 3_2:-52328853 Msa0410650:five_prime_UTR
GTCTTTATAGAATTCTACAA+GGG 0.676413 3_2:+52326971 None:intergenic
AGGGATGAGTATAGACGCAG+GGG 0.684798 3_2:-52327050 Msa0410650:CDS
AGAAAAGTGAGCTTGAGTCG+CGG 0.686345 3_2:-52326066 Msa0410650:CDS
TACAATGTCTCAGAGCTCTG+AGG 0.691431 3_2:-52327507 Msa0410650:exon
CATATCGAGTCAATCCTCTG+TGG 0.700317 3_2:-52327019 Msa0410650:CDS
AAAGGCATATAGTGCCGTGG+TGG 0.703811 3_2:-52322568 Msa0410650:CDS
CCATGCTAGAGATAATACAA+AGG 0.708587 3_2:+52321177 None:intergenic
AATGGACTGAGAAAAGAAGT+GGG 0.713485 3_2:-52322594 Msa0410650:CDS
AGAGAATAATTTGTGCATGG+CGG 0.721545 3_2:-52321345 Msa0410650:three_prime_UTR
TGAAAAGGCATATAGTGCCG+TGG 0.725018 3_2:-52322571 Msa0410650:CDS
TATTGGTGTGAAGAGAATGG+GGG 0.746922 3_2:-52324021 Msa0410650:CDS
TGACCTCGGAAATTCCACAG+AGG 0.808295 3_2:+52327005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTATTTCATTTTTATTTTT+AGG - chr3_2:52321402-52321421 Msa0410650:intron 10.0%
!!! TTTTTATTTTTATTTTTACG+AGG - chr3_2:52321525-52321544 Msa0410650:intron 10.0%
!! ATCAACAAAAAAAAAATATT+AGG + chr3_2:52325456-52325475 None:intergenic 10.0%
!!! TTTTTACATTACTTTTATAA+TGG - chr3_2:52325713-52325732 Msa0410650:intron 10.0%
!! TATATATATATATATTCACA+TGG + chr3_2:52326770-52326789 None:intergenic 10.0%
!!! AGTGAAATTAATTGATTTTT+GGG - chr3_2:52321359-52321378 Msa0410650:three_prime_UTR 15.0%
!! ATTGTTAAATTGAATTTAGA+TGG - chr3_2:52321708-52321727 Msa0410650:intron 15.0%
!!! GTTTTTTTGTTTTAACATAT+TGG - chr3_2:52324002-52324021 Msa0410650:CDS 15.0%
!!! TTGATGTATTTACTTTAAAA+TGG - chr3_2:52324312-52324331 Msa0410650:intron 15.0%
!! TTTAAATATCAAATAGTAAG+TGG + chr3_2:52324724-52324743 None:intergenic 15.0%
!!! TCTTAAGAAATATTTTTCTT+GGG + chr3_2:52324752-52324771 None:intergenic 15.0%
!!! TTCTTAAGAAATATTTTTCT+TGG + chr3_2:52324753-52324772 None:intergenic 15.0%
!! TAATTCAAGTATGAAAAAAT+TGG + chr3_2:52325420-52325439 None:intergenic 15.0%
!!! TTTTTCATACTTGAATTATT+TGG - chr3_2:52325422-52325441 Msa0410650:intron 15.0%
!! CAGTAAAATGTATAAAAAAA+AGG + chr3_2:52325774-52325793 None:intergenic 15.0%
!!! TTATCACTTTTAATCAATTT+TGG - chr3_2:52326111-52326130 Msa0410650:CDS 15.0%
!!! TATCTATTTTATCTGTATAA+TGG - chr3_2:52327154-52327173 Msa0410650:CDS 15.0%
!! CTAAAAAAAAAAAAATCAGA+AGG + chr3_2:52327999-52328018 None:intergenic 15.0%
!! AAAAATAAGAAAATATGAGA+TGG + chr3_2:52328318-52328337 None:intergenic 15.0%
!! AATTATGACCTAAGAAAAAT+TGG + chr3_2:52321223-52321242 None:intergenic 20.0%
!! CATAATTTCATAACTCAATT+CGG - chr3_2:52321236-52321255 Msa0410650:three_prime_UTR 20.0%
!!! CAAATTTTTCACTGTTTATT+CGG - chr3_2:52321319-52321338 Msa0410650:three_prime_UTR 20.0%
!!! CAGTGAAATTAATTGATTTT+TGG - chr3_2:52321358-52321377 Msa0410650:three_prime_UTR 20.0%
!!! TTTGATAATTGTTTGATTAG+TGG - chr3_2:52321478-52321497 Msa0410650:intron 20.0%
!!! TTGATAATTGTTTGATTAGT+GGG - chr3_2:52321479-52321498 Msa0410650:intron 20.0%
!! AAAATAAAAAGTTGAAACAC+TGG + chr3_2:52321515-52321534 None:intergenic 20.0%
!!! TTATTAATCTGAAGTTTGAA+GGG - chr3_2:52321656-52321675 Msa0410650:intron 20.0%
!!! TTGAATTTAGATGGTTTTTT+AGG - chr3_2:52321717-52321736 Msa0410650:intron 20.0%
!!! TGGTTTTTTAGGTTATTTTA+AGG - chr3_2:52321728-52321747 Msa0410650:intron 20.0%
!!! TCCTTTTTATAAGAAACAAA+TGG - chr3_2:52321997-52322016 Msa0410650:intron 20.0%
!!! CCTTTTTATAAGAAACAAAT+GGG - chr3_2:52321998-52322017 Msa0410650:intron 20.0%
!! TCAACAAAAGTTAATGTATT+TGG - chr3_2:52322021-52322040 Msa0410650:intron 20.0%
!!! GCTGTTTTTATAAACTATAT+TGG - chr3_2:52322164-52322183 Msa0410650:intron 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG - chr3_2:52322641-52322660 Msa0410650:intron 20.0%
!! TACAAAAAGAACAATATCAT+TGG - chr3_2:52323074-52323093 Msa0410650:intron 20.0%
!! AAATTATTGAAAAGTAACTC+GGG + chr3_2:52323333-52323352 None:intergenic 20.0%
!! CAAATTATTGAAAAGTAACT+CGG + chr3_2:52323334-52323353 None:intergenic 20.0%
!! ATTCTGAATTTGACAATTAA+GGG - chr3_2:52323513-52323532 Msa0410650:intron 20.0%
!! TTTCTTTATCTCTAAATACA+AGG + chr3_2:52323731-52323750 None:intergenic 20.0%
!!! CATATTGGTTGTTATTAATA+TGG - chr3_2:52324017-52324036 Msa0410650:CDS 20.0%
!! CAACAATTACTGTTAAATAT+TGG + chr3_2:52324477-52324496 None:intergenic 20.0%
!! CAATATTTAACAGTAATTGT+TGG - chr3_2:52324475-52324494 Msa0410650:intron 20.0%
!!! GCTTTTAATGATATGAAATT+CGG - chr3_2:52324541-52324560 Msa0410650:intron 20.0%
!!! CTTTTAATGATATGAAATTC+GGG - chr3_2:52324542-52324561 Msa0410650:intron 20.0%
!! AGATATAAATGTTATGAAAC+TGG - chr3_2:52324939-52324958 Msa0410650:intron 20.0%
!! AGTATGAAAAAATTGGAAAA+TGG + chr3_2:52325413-52325432 None:intergenic 20.0%
!! TATGAAGAAAAGATATAATG+AGG - chr3_2:52325923-52325942 Msa0410650:intron 20.0%
!! AAAGTTAAAAATACAGTTAC+TGG + chr3_2:52326357-52326376 None:intergenic 20.0%
!!! AGTAACTGTATTTTTAACTT+TGG - chr3_2:52326356-52326375 Msa0410650:intron 20.0%
!! TTAATCTGATCATTATCAAA+GGG + chr3_2:52326848-52326867 None:intergenic 20.0%
!! ATTAATCTGATCATTATCAA+AGG + chr3_2:52326849-52326868 None:intergenic 20.0%
!! ATAAAGAGCAATTAACTATA+AGG + chr3_2:52326964-52326983 None:intergenic 20.0%
!! ATTAATGAATATAATCCTAG+TGG - chr3_2:52327362-52327381 Msa0410650:CDS 20.0%
!! TTAATGAATATAATCCTAGT+GGG - chr3_2:52327363-52327382 Msa0410650:CDS 20.0%
!! TTCTAGTAAAAGTAATCATA+TGG + chr3_2:52327672-52327691 None:intergenic 20.0%
!!! ATGATTACTTTTACTAGAAA+AGG - chr3_2:52327673-52327692 Msa0410650:intron 20.0%
!!! TGATTACTTTTACTAGAAAA+GGG - chr3_2:52327674-52327693 Msa0410650:intron 20.0%
!!! TTTTTGATATTGATAGAAAC+TGG + chr3_2:52327762-52327781 None:intergenic 20.0%
!!! AAAATTATCCTTTTTGGTTA+AGG + chr3_2:52328194-52328213 None:intergenic 20.0%
!!! CTGAAAAAAATTATCCTTTT+TGG + chr3_2:52328200-52328219 None:intergenic 20.0%
!!! AATTTTTTTCAGAAACATTG+TGG - chr3_2:52328208-52328227 Msa0410650:intron 20.0%
!!! TTAATTTTTGGCATAACTTT+TGG - chr3_2:52328369-52328388 Msa0410650:intron 20.0%
!!! TTTTGGAGATTTCTAATTTT+GGG - chr3_2:52328386-52328405 Msa0410650:intron 20.0%
!! AATTTATGATCATGTTAAAC+TGG - chr3_2:52328637-52328656 Msa0410650:intron 20.0%
! AAATATTAGGGATTTGACAA+TGG + chr3_2:52321105-52321124 None:intergenic 25.0%
! ATGAGGTTCTCAAAATATTA+GGG + chr3_2:52321117-52321136 None:intergenic 25.0%
! GTCATAAAAACAAAATGATG+AGG + chr3_2:52321134-52321153 None:intergenic 25.0%
! TAAGAAAAATTGGAAGTAGA+AGG + chr3_2:52321213-52321232 None:intergenic 25.0%
!! TTCTACTTCCAATTTTTCTT+AGG - chr3_2:52321212-52321231 Msa0410650:three_prime_UTR 25.0%
! AAATTGAGAAATGCAGAAAT+GGG + chr3_2:52321268-52321287 None:intergenic 25.0%
! AAAATTGAGAAATGCAGAAA+TGG + chr3_2:52321269-52321288 None:intergenic 25.0%
! TTTGAGAAACAAAAAGAGAA+AGG + chr3_2:52321303-52321322 None:intergenic 25.0%
! TTTGATTATCAACTGAATTG+TGG - chr3_2:52321454-52321473 Msa0410650:intron 25.0%
! TTGATTATCAACTGAATTGT+GGG - chr3_2:52321455-52321474 Msa0410650:intron 25.0%
! TGATAATTGTTTGATTAGTG+GGG - chr3_2:52321480-52321499 Msa0410650:intron 25.0%
!! GTTATTAATCTGAAGTTTGA+AGG - chr3_2:52321655-52321674 Msa0410650:intron 25.0%
! ATGAAATTTCTGTTCTACTT+TGG - chr3_2:52321827-52321846 Msa0410650:intron 25.0%
!! TTGTTTCTTATAAAAAGGAC+CGG + chr3_2:52321996-52322015 None:intergenic 25.0%
!! CCCATTTGTTTCTTATAAAA+AGG + chr3_2:52322001-52322020 None:intergenic 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr3_2:52322068-52322087 None:intergenic 25.0%
!! CTTTTTACAAGAGACAAAAT+TGG + chr3_2:52322091-52322110 None:intergenic 25.0%
!! CAATTTTGTCTCTTGTAAAA+AGG - chr3_2:52322089-52322108 Msa0410650:intron 25.0%
! TAACACTGAATTTGTATTTC+AGG - chr3_2:52322341-52322360 Msa0410650:intron 25.0%
!!! TTTGGCTTTAGTGAAATATT+TGG - chr3_2:52322635-52322654 Msa0410650:intron 25.0%
! TATGAATATAGATACTCCAT+CGG - chr3_2:52322668-52322687 Msa0410650:intron 25.0%
! GTCTTTATAGAATTCTACAA+GGG + chr3_2:52322925-52322944 None:intergenic 25.0%
! AGTCTTTATAGAATTCTACA+AGG + chr3_2:52322926-52322945 None:intergenic 25.0%
! TTGTAGAATTCTATAAAGAC+TGG - chr3_2:52322925-52322944 Msa0410650:intron 25.0%
!!! CGAGTTACTTTTCAATAATT+TGG - chr3_2:52323332-52323351 Msa0410650:intron 25.0%
!! ACTTTTCAATAATTTGGATC+AGG - chr3_2:52323338-52323357 Msa0410650:intron 25.0%
! GATTCTGAATTTGACAATTA+AGG - chr3_2:52323512-52323531 Msa0410650:intron 25.0%
! TTCTGAATTTGACAATTAAG+GGG - chr3_2:52323514-52323533 Msa0410650:intron 25.0%
!! ATTTCTGAAGAATATTATGC+TGG - chr3_2:52323622-52323641 Msa0410650:intron 25.0%
!! CATCTAAAGTATCAATCATA+TGG + chr3_2:52324062-52324081 None:intergenic 25.0%
! AAGTGGAAATTGATTAAACT+TGG + chr3_2:52324115-52324134 None:intergenic 25.0%
! TTTGATTATCATGGAATGAT+TGG - chr3_2:52324146-52324165 Msa0410650:intron 25.0%
!! ATCATTTTCAGTTGAATCTA+TGG - chr3_2:52324176-52324195 Msa0410650:intron 25.0%
! AATCTATGGATGATTAATTC+TGG - chr3_2:52324190-52324209 Msa0410650:intron 25.0%
! ACTGGAAATATGATTAAAAC+TGG - chr3_2:52324226-52324245 Msa0410650:intron 25.0%
! TTTGAGTAGTATGTTGTTAA+AGG - chr3_2:52324255-52324274 Msa0410650:intron 25.0%
! TTGAGTAGTATGTTGTTAAA+GGG - chr3_2:52324256-52324275 Msa0410650:intron 25.0%
! TCTCCAATAAAATTCCATAT+TGG - chr3_2:52324584-52324603 Msa0410650:CDS 25.0%
!! CATCCAATATGGAATTTTAT+TGG + chr3_2:52324590-52324609 None:intergenic 25.0%
! ATATCAAATAGTAAGTGGAA+TGG + chr3_2:52324719-52324738 None:intergenic 25.0%
! TTTAAATAATCTCAGAGACA+CGG + chr3_2:52324798-52324817 None:intergenic 25.0%
!!! CATTACTTTTATAATGGACT+TGG - chr3_2:52325719-52325738 Msa0410650:intron 25.0%
!! CATGAAGATAGTCAATATTT+TGG - chr3_2:52326164-52326183 Msa0410650:intron 25.0%
! TATAATACACCTAAGTAACA+AGG + chr3_2:52326508-52326527 None:intergenic 25.0%
!! TGTTACTTAGGTGTATTATA+CGG - chr3_2:52326508-52326527 Msa0410650:intron 25.0%
!! AATATTTGGTAATCCCTTAA+AGG - chr3_2:52326672-52326691 Msa0410650:CDS 25.0%
! TAAGGTAATATCATGAATCT+CGG + chr3_2:52326946-52326965 None:intergenic 25.0%
!! TGCTCTTTATTCAACTATTT+TGG - chr3_2:52326974-52326993 Msa0410650:CDS 25.0%
! CTAAATATAGTCATCTTAGA+TGG + chr3_2:52327010-52327029 None:intergenic 25.0%
!! CATCTAAGATGACTATATTT+AGG - chr3_2:52327008-52327027 Msa0410650:CDS 25.0%
! AAGATCTTAATAATGTGCTT+TGG - chr3_2:52327043-52327062 Msa0410650:CDS 25.0%
! CTTGTCAATTTAATCATCAA+TGG + chr3_2:52327072-52327091 None:intergenic 25.0%
!! CATTGATGATTAAATTGACA+AGG - chr3_2:52327070-52327089 Msa0410650:CDS 25.0%
! AGAGAAAATTACAGTAACAT+AGG + chr3_2:52327530-52327549 None:intergenic 25.0%
!!! CTGTTACTTTTAAGTAACTA+CGG + chr3_2:52327585-52327604 None:intergenic 25.0%
! TAAAAGTAATCATATGGAAG+GGG + chr3_2:52327666-52327685 None:intergenic 25.0%
! GTAAAAGTAATCATATGGAA+GGG + chr3_2:52327667-52327686 None:intergenic 25.0%
! AGTAAAAGTAATCATATGGA+AGG + chr3_2:52327668-52327687 None:intergenic 25.0%
!! ATATTGATAGAAACTGGTTT+CGG + chr3_2:52327756-52327775 None:intergenic 25.0%
! ATATATAAGTCAGAAACTGA+AGG - chr3_2:52327803-52327822 Msa0410650:intron 25.0%
! AAAAACCCAATTCCATTAAA+GGG + chr3_2:52327924-52327943 None:intergenic 25.0%
! AAAAAACCCAATTCCATTAA+AGG + chr3_2:52327925-52327944 None:intergenic 25.0%
! AAAAAAAATCAGAAGGTTGA+GGG + chr3_2:52327992-52328011 None:intergenic 25.0%
! AAAAAAAAATCAGAAGGTTG+AGG + chr3_2:52327993-52328012 None:intergenic 25.0%
!!! CTTTTGGAGATTTCTAATTT+TGG - chr3_2:52328385-52328404 Msa0410650:intron 25.0%
!! TTTGGAGATTTCTAATTTTG+GGG - chr3_2:52328387-52328406 Msa0410650:intron 25.0%
!!! TAATTTTGGGGTTTGTAATT+AGG - chr3_2:52328399-52328418 Msa0410650:intron 25.0%
!!! ATCTTTTCATGTTTTGTTGA+TGG - chr3_2:52328499-52328518 Msa0410650:intron 25.0%
GATGAGGTTCTCAAAATATT+AGG + chr3_2:52321118-52321137 None:intergenic 30.0%
AATTGGAAGTAGAAGGAAAA+TGG + chr3_2:52321206-52321225 None:intergenic 30.0%
!! AATGTCTCATGTTGACTTAA+GGG - chr3_2:52321620-52321639 Msa0410650:intron 30.0%
AAATAAGACAGACAGGATTT+AGG - chr3_2:52321866-52321885 Msa0410650:intron 30.0%
AATAAGACAGACAGGATTTA+GGG - chr3_2:52321867-52321886 Msa0410650:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr3_2:52321893-52321912 None:intergenic 30.0%
! TTTTAATATCATACTCCCTC+CGG - chr3_2:52321974-52321993 Msa0410650:intron 30.0%
! ATAAATTTGGTGAGACTGTT+TGG + chr3_2:52322256-52322275 None:intergenic 30.0%
CTTATCTACTGGCATAAATT+TGG + chr3_2:52322269-52322288 None:intergenic 30.0%
! TTGTATTTCAGGTGGTATAA+AGG - chr3_2:52322352-52322371 Msa0410650:intron 30.0%
TGTTATGAAGAACTGAAAAG+TGG - chr3_2:52322456-52322475 Msa0410650:CDS 30.0%
! TTTCTTTTCTTAGGACAGTA+TGG + chr3_2:52322522-52322541 None:intergenic 30.0%
ACTGTCCTAAGAAAAGAAAA+CGG - chr3_2:52322523-52322542 Msa0410650:CDS 30.0%
! TAATCCCGTTTTCTTTTCTT+AGG + chr3_2:52322531-52322550 None:intergenic 30.0%
TTAACTATAACTCCAATCCA+AGG + chr3_2:52322765-52322784 None:intergenic 30.0%
TTTATAGAATTCTACAAGGG+CGG + chr3_2:52322922-52322941 None:intergenic 30.0%
CTCAATAATGTTGGTCAAAT+TGG + chr3_2:52323183-52323202 None:intergenic 30.0%
CAATTTGACCAACATTATTG+AGG - chr3_2:52323181-52323200 Msa0410650:intron 30.0%
! GTTTTTGACCTCAATAATGT+TGG + chr3_2:52323192-52323211 None:intergenic 30.0%
! TGTCATAGCAGAATTCATTT+TGG + chr3_2:52323258-52323277 None:intergenic 30.0%
CTCATTCAAGCTTATAATGA+AGG - chr3_2:52323290-52323309 Msa0410650:intron 30.0%
TCTGAATTTGACAATTAAGG+GGG - chr3_2:52323515-52323534 Msa0410650:intron 30.0%
GTTGCACCATAAATAAAGTT+TGG - chr3_2:52323586-52323605 Msa0410650:intron 30.0%
! ACGATGCCAAACTTTATTTA+TGG + chr3_2:52323595-52323614 None:intergenic 30.0%
CGTGATCATTAAAAATCCTT+TGG + chr3_2:52323780-52323799 None:intergenic 30.0%
GATTCCTGTAGAATTTGTAT+TGG - chr3_2:52323971-52323990 Msa0410650:CDS 30.0%
TTCTCCAATACAAATTCTAC+AGG + chr3_2:52323978-52323997 None:intergenic 30.0%
ATCAAACATGCTAAGTAAAG+TGG + chr3_2:52324132-52324151 None:intergenic 30.0%
CTTAGCATGTTTGATTATCA+TGG - chr3_2:52324137-52324156 Msa0410650:intron 30.0%
ATTATCATGGAATGATTGGT+TGG - chr3_2:52324150-52324169 Msa0410650:intron 30.0%
! TGATTAATTCTGGAAAGAGT+CGG - chr3_2:52324200-52324219 Msa0410650:intron 30.0%
ATCTGTCTATCTGTGTTTAA+CGG - chr3_2:52324373-52324392 Msa0410650:intron 30.0%
ACTTGTGATTTAAGCAACAA+GGG + chr3_2:52324436-52324455 None:intergenic 30.0%
!! ATTGTTGGCTCTACTTAAAA+TGG - chr3_2:52324490-52324509 Msa0410650:intron 30.0%
ATATGAAATTCGGGTAATGA+GGG - chr3_2:52324551-52324570 Msa0410650:CDS 30.0%
! AGGAAAAAAGTTTTACAGGA+TGG + chr3_2:52324651-52324670 None:intergenic 30.0%
AAATAGTAAGTGGAATGGAA+AGG + chr3_2:52324714-52324733 None:intergenic 30.0%
!!! AGATGTAGAAGTTTTGAAGA+AGG - chr3_2:52325208-52325227 Msa0410650:intron 30.0%
! AAGGTAGATGATTTGCATAT+GGG - chr3_2:52325227-52325246 Msa0410650:intron 30.0%
AAAGCACAACTTACACATAT+AGG + chr3_2:52325556-52325575 None:intergenic 30.0%
TAATGCTTTCTCTATCTTGT+AGG - chr3_2:52325821-52325840 Msa0410650:intron 30.0%
AATGCTTTCTCTATCTTGTA+GGG - chr3_2:52325822-52325841 Msa0410650:intron 30.0%
! TTGTAGGGCATTAAAGATAT+AGG - chr3_2:52325837-52325856 Msa0410650:intron 30.0%
! ATCTTTTCTTCATAGCTTCA+AGG + chr3_2:52325917-52325936 None:intergenic 30.0%
GAAGAAAAGATATAATGAGG+AGG - chr3_2:52325926-52325945 Msa0410650:intron 30.0%
TTCAGAACTATGTTCATTGT+GGG - chr3_2:52325965-52325984 Msa0410650:intron 30.0%
TCAAAGTTGTCATGATTGAA+GGG - chr3_2:52326021-52326040 Msa0410650:CDS 30.0%
TAATGAAGCATGTAGATTTC+TGG + chr3_2:52326094-52326113 None:intergenic 30.0%
! TATTGACTATCTTCATGAAG+AGG + chr3_2:52326161-52326180 None:intergenic 30.0%
TACTCTTGATTGGAACTATT+TGG - chr3_2:52326194-52326213 Msa0410650:intron 30.0%
ATTACATTTACAGGTTCAGA+AGG + chr3_2:52326220-52326239 None:intergenic 30.0%
AGAGAAGGAATTACATTTAC+AGG + chr3_2:52326229-52326248 None:intergenic 30.0%
TTTGTATCCAAGTGATTTAC+TGG - chr3_2:52326250-52326269 Msa0410650:intron 30.0%
AAATATGGTAGGGGATTAAT+AGG - chr3_2:52326299-52326318 Msa0410650:intron 30.0%
! ATGCAAAATCCTTGTTACTT+AGG - chr3_2:52326496-52326515 Msa0410650:intron 30.0%
GTTACTTAGGTGTATTATAC+GGG - chr3_2:52326509-52326528 Msa0410650:intron 30.0%
TTACTTAGGTGTATTATACG+GGG - chr3_2:52326510-52326529 Msa0410650:intron 30.0%
AAGAATTGAGGTGGAATATT+TGG - chr3_2:52326658-52326677 Msa0410650:CDS 30.0%
AAATGCAACAAGTCCTTTAA+GGG + chr3_2:52326688-52326707 None:intergenic 30.0%
AAAATGCAACAAGTCCTTTA+AGG + chr3_2:52326689-52326708 None:intergenic 30.0%
AATACAGTAATACTCATAGC+TGG - chr3_2:52326900-52326919 Msa0410650:CDS 30.0%
ATGAATCTCGGGATATTATA+GGG + chr3_2:52326934-52326953 None:intergenic 30.0%
AAGGTAATATCATGAATCTC+GGG + chr3_2:52326945-52326964 None:intergenic 30.0%
ATATAGTCATCTTAGATGGT+AGG + chr3_2:52327006-52327025 None:intergenic 30.0%
GTCAATTTAATCATCAATGG+TGG + chr3_2:52327069-52327088 None:intergenic 30.0%
CGTCATCTTTAATAATTTCC+TGG + chr3_2:52327268-52327287 None:intergenic 30.0%
TTTATAGTTCCATAACTCTG+AGG + chr3_2:52327399-52327418 None:intergenic 30.0%
AGAGTTATGGAACTATAAAG+CGG - chr3_2:52327400-52327419 Msa0410650:CDS 30.0%
ATTCAAAGAAGTAACTTAGG+TGG + chr3_2:52327608-52327627 None:intergenic 30.0%
GAGATTCAAAGAAGTAACTT+AGG + chr3_2:52327611-52327630 None:intergenic 30.0%
TCTTCTCAAGAAATTACAAG+TGG - chr3_2:52327629-52327648 Msa0410650:intron 30.0%
AAAAGTAATCATATGGAAGG+GGG + chr3_2:52327665-52327684 None:intergenic 30.0%
AAGAAAAAGCTAAGACAAAG+AGG + chr3_2:52327896-52327915 None:intergenic 30.0%
! TTTTCTTACAGTCCCTTTAA+TGG - chr3_2:52327909-52327928 Msa0410650:intron 30.0%
TTTGAAAGATCTATCACTGT+GGG + chr3_2:52327949-52327968 None:intergenic 30.0%
!! TTTTGAAAGATCTATCACTG+TGG + chr3_2:52327950-52327969 None:intergenic 30.0%
AAAAAAATCAGAAGGTTGAG+GGG + chr3_2:52327991-52328010 None:intergenic 30.0%
!!! TTTTTGCACTGGTTTTGTTT+TGG - chr3_2:52328072-52328091 Msa0410650:intron 30.0%
CTACAACAAGAAAACAACAA+AGG + chr3_2:52328110-52328129 None:intergenic 30.0%
! CATGTTTTCCTTAACCAAAA+AGG - chr3_2:52328183-52328202 Msa0410650:intron 30.0%
AGAATAAAACTCAACATCTG+TGG + chr3_2:52328279-52328298 None:intergenic 30.0%
! AGCAAATTGATTCCAAACAT+AGG + chr3_2:52328452-52328471 None:intergenic 30.0%
TTATGCACAACCTTAATCTT+CGG + chr3_2:52328610-52328629 None:intergenic 30.0%
CTTTGTATTATCTCTAGCAT+GGG - chr3_2:52328717-52328736 Msa0410650:five_prime_UTR 30.0%
AAGTAGAAGGAAAATGGATC+TGG + chr3_2:52321200-52321219 None:intergenic 35.0%
GAGAAACAAAAAGAGAAAGG+AGG + chr3_2:52321300-52321319 None:intergenic 35.0%
!! GAATGTCTCATGTTGACTTA+AGG - chr3_2:52321619-52321638 Msa0410650:intron 35.0%
!! ATGTCTCATGTTGACTTAAG+GGG - chr3_2:52321621-52321640 Msa0410650:intron 35.0%
TATGTCAAGTCACACATTTG+AGG - chr3_2:52321762-52321781 Msa0410650:intron 35.0%
ATGTCAAGTCACACATTTGA+GGG - chr3_2:52321763-52321782 Msa0410650:intron 35.0%
!! TGTCTGTCTTATTTCAAGCT+TGG + chr3_2:52321860-52321879 None:intergenic 35.0%
AAGCTTGAAATAAGACAGAC+AGG - chr3_2:52321859-52321878 Msa0410650:intron 35.0%
TTCTTATAAAAAGGACCGGA+GGG + chr3_2:52321992-52322011 None:intergenic 35.0%
TTTCTTATAAAAAGGACCGG+AGG + chr3_2:52321993-52322012 None:intergenic 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG - chr3_2:52322094-52322113 Msa0410650:intron 35.0%
! TCATTTTATCTTACTCCCTC+CGG + chr3_2:52322116-52322135 None:intergenic 35.0%
ACCAATTTGAGCTTATCTAC+TGG + chr3_2:52322280-52322299 None:intergenic 35.0%
CACTGAATTTGTATTTCAGG+TGG - chr3_2:52322344-52322363 Msa0410650:intron 35.0%
!! TTCTGAGATAAGTGAGTATG+AGG - chr3_2:52322428-52322447 Msa0410650:CDS 35.0%
AAGTCAGAATGTGAAAACCT+CGG - chr3_2:52322479-52322498 Msa0410650:CDS 35.0%
CTGTCCTAAGAAAAGAAAAC+GGG - chr3_2:52322524-52322543 Msa0410650:CDS 35.0%
! AAATGAGTAGCCTTTTCTCT+TGG + chr3_2:52322618-52322637 None:intergenic 35.0%
AAGAGAAAAGGCTACTCATT+TGG - chr3_2:52322617-52322636 Msa0410650:CDS 35.0%
! ATTCTGATGAGCAGTTTGTT+TGG - chr3_2:52322739-52322758 Msa0410650:intron 35.0%
TAGTTAATATTCCCACTAGC+AGG - chr3_2:52322778-52322797 Msa0410650:intron 35.0%
AGTTAATATTCCCACTAGCA+GGG - chr3_2:52322779-52322798 Msa0410650:intron 35.0%
! TCTTTTTGTAGTCATCAGCT+CGG + chr3_2:52323064-52323083 None:intergenic 35.0%
ATAATTTGGATCAGGACTTG+TGG - chr3_2:52323346-52323365 Msa0410650:intron 35.0%
CAAATTCAGAATCAACCCAT+TGG + chr3_2:52323505-52323524 None:intergenic 35.0%
GAAAATACAGTCAAGTGCTA+AGG - chr3_2:52323747-52323766 Msa0410650:intron 35.0%
AAGAAAGTTGCTAGAAGAGA+TGG - chr3_2:52323894-52323913 Msa0410650:CDS 35.0%
!! TGTGTTGCTGCTTTCAATTA+AGG - chr3_2:52324080-52324099 Msa0410650:intron 35.0%
TCCAAAACAAGTTAAGTGTC+TGG - chr3_2:52324285-52324304 Msa0410650:intron 35.0%
!!! TCCAGACACTTAACTTGTTT+TGG + chr3_2:52324289-52324308 None:intergenic 35.0%
! TGTGTCTCTGATTTTCATCT+AGG - chr3_2:52324398-52324417 Msa0410650:intron 35.0%
CACTTGTGATTTAAGCAACA+AGG + chr3_2:52324437-52324456 None:intergenic 35.0%
CATAGCATATAACCACTCAT+TGG + chr3_2:52324522-52324541 None:intergenic 35.0%
GATATGAAATTCGGGTAATG+AGG - chr3_2:52324550-52324569 Msa0410650:intron 35.0%
! AGGGAGGAAAAAAGTTTTAC+AGG + chr3_2:52324655-52324674 None:intergenic 35.0%
!!! TTTTTTCCTCCCTCCAATTT+GGG - chr3_2:52324662-52324681 Msa0410650:CDS 35.0%
!! CAAGCTGAATGATTTTAGCA+TGG + chr3_2:52325097-52325116 None:intergenic 35.0%
ACTGGATATGAAACAAAAGC+TGG - chr3_2:52325124-52325143 Msa0410650:intron 35.0%
TATGAAACAAAAGCTGGAAC+TGG - chr3_2:52325130-52325149 Msa0410650:intron 35.0%
! GAAGGTAGATGATTTGCATA+TGG - chr3_2:52325226-52325245 Msa0410650:intron 35.0%
! ATGATTTGCATATGGGTTTG+AGG - chr3_2:52325234-52325253 Msa0410650:intron 35.0%
! TGATTTGCATATGGGTTTGA+GGG - chr3_2:52325235-52325254 Msa0410650:intron 35.0%
GAACCAAACACTAATCATCA+AGG - chr3_2:52325292-52325311 Msa0410650:intron 35.0%
CATATTGGTGTGAAGAGAAT+GGG - chr3_2:52325870-52325889 Msa0410650:intron 35.0%
ATATTGGTGTGAAGAGAATG+GGG - chr3_2:52325871-52325890 Msa0410650:intron 35.0%
TTCTTCATAGCTTCAAGGAA+CGG + chr3_2:52325912-52325931 None:intergenic 35.0%
CTTCAGAACTATGTTCATTG+TGG - chr3_2:52325964-52325983 Msa0410650:intron 35.0%
AGTATCTAAAAGACCCAGAT+TGG - chr3_2:52325991-52326010 Msa0410650:intron 35.0%
CATGATTGAAGGGAAAGAAA+AGG - chr3_2:52326031-52326050 Msa0410650:CDS 35.0%
ATTGAAGGGAAAGAAAAGGT+AGG - chr3_2:52326035-52326054 Msa0410650:CDS 35.0%
CACTTGGATACAAAAAGAGA+AGG + chr3_2:52326244-52326263 None:intergenic 35.0%
!! CGAAAAAAGTATCTGCTGTT+TGG - chr3_2:52326276-52326295 Msa0410650:intron 35.0%
! GTATCTGCTGTTTGGAAATA+TGG - chr3_2:52326284-52326303 Msa0410650:intron 35.0%
! TGCTGTTTGGAAATATGGTA+GGG - chr3_2:52326289-52326308 Msa0410650:intron 35.0%
TCATTCTGTGTTTGAAAGCT+CGG - chr3_2:52326412-52326431 Msa0410650:intron 35.0%
TATTATACGGGGAAAGTGAT+GGG - chr3_2:52326521-52326540 Msa0410650:intron 35.0%
TGAGTGAATACCAAAATGAG+TGG - chr3_2:52326566-52326585 Msa0410650:intron 35.0%
AATACCAAAATGAGTGGTAG+TGG - chr3_2:52326572-52326591 Msa0410650:intron 35.0%
ATACCAAAATGAGTGGTAGT+GGG - chr3_2:52326573-52326592 Msa0410650:intron 35.0%
CTGGAAAACAGAGAAATACA+TGG + chr3_2:52326718-52326737 None:intergenic 35.0%
! ATTTTCACTTTCTCTGATGC+TGG + chr3_2:52326737-52326756 None:intergenic 35.0%
CAAAGGGATTGCAATTTACA+TGG + chr3_2:52326832-52326851 None:intergenic 35.0%
TAATTCAGAAGAGAGAAGTC+TGG - chr3_2:52326871-52326890 Msa0410650:CDS 35.0%
CATGAATCTCGGGATATTAT+AGG + chr3_2:52326935-52326954 None:intergenic 35.0%
ATAAACTGTCCTAAAGCAGT+GGG + chr3_2:52327126-52327145 None:intergenic 35.0%
AATAAACTGTCCTAAAGCAG+TGG + chr3_2:52327127-52327146 None:intergenic 35.0%
! TTCTACGCATTTTTCATTCC+AGG - chr3_2:52327247-52327266 Msa0410650:CDS 35.0%
!! AATGGACTGAGAAAAGAAGT+GGG - chr3_2:52327299-52327318 Msa0410650:CDS 35.0%
GATATGTAACCTCAGAGTTA+TGG - chr3_2:52327387-52327406 Msa0410650:CDS 35.0%
GAGTTATGGAACTATAAAGC+GGG - chr3_2:52327401-52327420 Msa0410650:CDS 35.0%
! AGAAGGAGTGAAGTTTTTGT+TGG - chr3_2:52327442-52327461 Msa0410650:CDS 35.0%
AGAAGAAAGGAATGTTGTGA+AGG - chr3_2:52327480-52327499 Msa0410650:CDS 35.0%
AATTGGGAATTTCCCACTTA+AGG + chr3_2:52327721-52327740 None:intergenic 35.0%
TACAGTCCCTTTAATGGAAT+TGG - chr3_2:52327915-52327934 Msa0410650:intron 35.0%
ACAGTCCCTTTAATGGAATT+GGG - chr3_2:52327916-52327935 Msa0410650:intron 35.0%
!!! TGCAGTTTCTTTTTTTGCAC+TGG - chr3_2:52328061-52328080 Msa0410650:intron 35.0%
!! GATTTGTTGAAATTGAGCAG+CGG - chr3_2:52328230-52328249 Msa0410650:intron 35.0%
!!! TTTCATGTTTTGTTGATGGC+AGG - chr3_2:52328503-52328522 Msa0410650:intron 35.0%
CCATGCACAAATTATTCTCT+CGG + chr3_2:52328548-52328567 None:intergenic 35.0%
! AGAGAATAATTTGTGCATGG+CGG - chr3_2:52328548-52328567 Msa0410650:intron 35.0%
TACAAAAGCAGTTTGAGTCT+CGG + chr3_2:52328689-52328708 None:intergenic 35.0%
CCATGCTAGAGATAATACAA+AGG + chr3_2:52328719-52328738 None:intergenic 35.0%
CCTTTGTATTATCTCTAGCA+TGG - chr3_2:52328716-52328735 Msa0410650:five_prime_UTR 35.0%
!!! TGATTTTGTTTTGCGTATCC+AGG - chr3_2:52328822-52328841 Msa0410650:five_prime_UTR 35.0%
!!! ACTTAGTTTTGATCAAGACC+TGG + chr3_2:52328843-52328862 None:intergenic 35.0%
! GCTCTCTAAGAAGAGAGTTT+AGG + chr3_2:52321156-52321175 None:intergenic 40.0%
TTTGGTGAGACTGTTTGGTA+GGG + chr3_2:52322251-52322270 None:intergenic 40.0%
! ATTTGGTGAGACTGTTTGGT+AGG + chr3_2:52322252-52322271 None:intergenic 40.0%
GCCAGTAGATAAGCTCAAAT+TGG - chr3_2:52322276-52322295 Msa0410650:intron 40.0%
! TTTCAGGTGGTATAAAGGCT+AGG - chr3_2:52322357-52322376 Msa0410650:intron 40.0%
GAAGAGAAAGCCAAGAGAAA+AGG - chr3_2:52322605-52322624 Msa0410650:CDS 40.0%
TTATCAGCACCGTTATCAGT+TGG + chr3_2:52322696-52322715 None:intergenic 40.0%
!! ACTGATAACGGTGCTGATAA+CGG - chr3_2:52322696-52322715 Msa0410650:intron 40.0%
TCTATACTCATCCCTAAGCT+TGG + chr3_2:52322838-52322857 None:intergenic 40.0%
! GAATTCTATAAAGACTGGCC+CGG - chr3_2:52322930-52322949 Msa0410650:intron 40.0%
TGCAAGTGCATTATCTAAGC+CGG + chr3_2:52322952-52322971 None:intergenic 40.0%
TGTTAATACAGAGCCGAAGT+CGG - chr3_2:52323019-52323038 Msa0410650:intron 40.0%
! CTTTTTGTAGTCATCAGCTC+GGG + chr3_2:52323063-52323082 None:intergenic 40.0%
TGGTGAATATCTGCGAAAGA+TGG - chr3_2:52323094-52323113 Msa0410650:intron 40.0%
GGTGAATATCTGCGAAAGAT+GGG - chr3_2:52323095-52323114 Msa0410650:intron 40.0%
CAAAACCATACCTGAACTTC+AGG - chr3_2:52323124-52323143 Msa0410650:intron 40.0%
TTCTTCCTGAAGTTCAGGTA+TGG + chr3_2:52323132-52323151 None:intergenic 40.0%
TATGTAGTGCAACTTGCAAC+TGG - chr3_2:52323440-52323459 Msa0410650:intron 40.0%
! TAGCAGTATGTGGCTATTTC+CGG + chr3_2:52323552-52323571 None:intergenic 40.0%
TACTGCTAGGATCATTGCAA+CGG - chr3_2:52323564-52323583 Msa0410650:intron 40.0%
AAAGTTGCTAGAAGAGATGG+AGG - chr3_2:52323897-52323916 Msa0410650:CDS 40.0%
! TCTCTGATTTTCATCTAGGC+AGG - chr3_2:52324402-52324421 Msa0410650:intron 40.0%
! CTCTGATTTTCATCTAGGCA+GGG - chr3_2:52324403-52324422 Msa0410650:intron 40.0%
TGATTTAAGCAACAAGGGAC+GGG + chr3_2:52324431-52324450 None:intergenic 40.0%
GTGATTTAAGCAACAAGGGA+CGG + chr3_2:52324432-52324451 None:intergenic 40.0%
TGCTTAAATCACAAGTGACG+TGG - chr3_2:52324440-52324459 Msa0410650:intron 40.0%
AAATCACAAGTGACGTGGAA+CGG - chr3_2:52324445-52324464 Msa0410650:intron 40.0%
CCATTGCAATGCATCCAATA+TGG + chr3_2:52324601-52324620 None:intergenic 40.0%
CCATATTGGATGCATTGCAA+TGG - chr3_2:52324598-52324617 Msa0410650:CDS 40.0%
!!! CTTTTTTCCTCCCTCCAATT+TGG - chr3_2:52324661-52324680 Msa0410650:CDS 40.0%
! TTTTTCCTCCCTCCAATTTG+GGG - chr3_2:52324663-52324682 Msa0410650:CDS 40.0%
!! AAGGCTTTGTTTAACTCTGC+TGG - chr3_2:52324845-52324864 Msa0410650:intron 40.0%
GAGAAATAGCTCTCTTCAGA+TGG - chr3_2:52324894-52324913 Msa0410650:intron 40.0%
CATTCAGCTTGAAAGACAAC+TGG - chr3_2:52325106-52325125 Msa0410650:intron 40.0%
CTGGAGATTCAGCAACTAAA+AGG - chr3_2:52325149-52325168 Msa0410650:intron 40.0%
! GCTCCTTGATGATTAGTGTT+TGG + chr3_2:52325298-52325317 None:intergenic 40.0%
TAAGAGTAACGATGAACTGC+AGG - chr3_2:52325319-52325338 Msa0410650:intron 40.0%
ATAGGTACTCGAGTCCATAT+TGG - chr3_2:52325855-52325874 Msa0410650:intron 40.0%
CCATTCTCTTCACACCAATA+TGG + chr3_2:52325872-52325891 None:intergenic 40.0%
CCATATTGGTGTGAAGAGAA+TGG - chr3_2:52325869-52325888 Msa0410650:intron 40.0%
TATTGGTGTGAAGAGAATGG+GGG - chr3_2:52325872-52325891 Msa0410650:intron 40.0%
! TGGTTGACTCTACTCTTGAT+TGG - chr3_2:52326184-52326203 Msa0410650:intron 40.0%
TTCGAGACCAGTAAATCACT+TGG + chr3_2:52326260-52326279 None:intergenic 40.0%
! CTGCTGTTTGGAAATATGGT+AGG - chr3_2:52326288-52326307 Msa0410650:intron 40.0%
GCTGTTTGGAAATATGGTAG+GGG - chr3_2:52326290-52326309 Msa0410650:intron 40.0%
!! GAAAGTGCAGTTGTTTCTCA+AGG + chr3_2:52326392-52326411 None:intergenic 40.0%
GTATTATACGGGGAAAGTGA+TGG - chr3_2:52326520-52326539 Msa0410650:intron 40.0%
!! AAAGTGATGGGCAGTAGTAA+TGG - chr3_2:52326533-52326552 Msa0410650:intron 40.0%
! TACCAAAATGAGTGGTAGTG+GGG - chr3_2:52326574-52326593 Msa0410650:intron 40.0%
!! GGGAGTAGGAATTAGTTTGT+GGG - chr3_2:52326596-52326615 Msa0410650:intron 40.0%
TGGGAAACGAGAATAAAAGC+AGG - chr3_2:52326615-52326634 Msa0410650:CDS 40.0%
AACGAGAATAAAAGCAGGAG+AGG - chr3_2:52326620-52326639 Msa0410650:CDS 40.0%
AGAATAAAAGCAGGAGAGGA+AGG - chr3_2:52326624-52326643 Msa0410650:CDS 40.0%
GAATAAAAGCAGGAGAGGAA+GGG - chr3_2:52326625-52326644 Msa0410650:CDS 40.0%
GGTGGAACATAGAAGAATTG+AGG - chr3_2:52326646-52326665 Msa0410650:CDS 40.0%
GGAACATAGAAGAATTGAGG+TGG - chr3_2:52326649-52326668 Msa0410650:CDS 40.0%
CTCGGGATATTATAGGGAAT+CGG + chr3_2:52326928-52326947 None:intergenic 40.0%
TGGGGGGAAATGAAAGTTAA+TGG + chr3_2:52327107-52327126 None:intergenic 40.0%
TAAACTGTCCTAAAGCAGTG+GGG + chr3_2:52327125-52327144 None:intergenic 40.0%
AAACTCCTAACGATTGCACT+TGG - chr3_2:52327216-52327235 Msa0410650:CDS 40.0%
GATAACCAAGTGCAATCGTT+AGG + chr3_2:52327224-52327243 None:intergenic 40.0%
AACGATTGCACTTGGTTATC+TGG - chr3_2:52327224-52327243 Msa0410650:CDS 40.0%
GATGACGATGAAAAGCTGAA+TGG - chr3_2:52327281-52327300 Msa0410650:CDS 40.0%
!! GAATGGACTGAGAAAAGAAG+TGG - chr3_2:52327298-52327317 Msa0410650:CDS 40.0%
GAGAAAAGAAGTGGGTGAAA+AGG - chr3_2:52327307-52327326 Msa0410650:CDS 40.0%
TATGGAACTATAAAGCGGGA+AGG - chr3_2:52327405-52327424 Msa0410650:CDS 40.0%
! TGAAGTTTTTGTTGGACTGC+TGG - chr3_2:52327450-52327469 Msa0410650:CDS 40.0%
AGTAACTACGGTACAACAGT+TGG + chr3_2:52327573-52327592 None:intergenic 40.0%
TGGGAAATTCCCAATTCCAT+CGG - chr3_2:52327725-52327744 Msa0410650:intron 40.0%
! TCGGATTTTCCGATGGAATT+GGG + chr3_2:52327737-52327756 None:intergenic 40.0%
! TTCGGATTTTCCGATGGAAT+TGG + chr3_2:52327738-52327757 None:intergenic 40.0%
AAGCTAAGACAAAGAGGAAG+AGG + chr3_2:52327890-52327909 None:intergenic 40.0%
ATCTGTGGATTCCATCTCTA+CGG + chr3_2:52328264-52328283 None:intergenic 40.0%
ATGAGATGGAATTAGTAGCG+TGG + chr3_2:52328304-52328323 None:intergenic 40.0%
GAGATAAAGTAGCATGCACA+TGG - chr3_2:52328424-52328443 Msa0410650:intron 40.0%
ATGCACATGGATCCTATGTT+TGG - chr3_2:52328437-52328456 Msa0410650:intron 40.0%
! CCGAGAGAATAATTTGTGCA+TGG - chr3_2:52328545-52328564 Msa0410650:intron 40.0%
GGTTTGCAGCTCTACAAATA+TGG + chr3_2:52328589-52328608 None:intergenic 40.0%
AGTAGTCACACACACTCACA+CGG - chr3_2:52321040-52321059 Msa0410650:three_prime_UTR 45.0%
!! CTCTCTTCTTAGAGAGCGTT+AGG - chr3_2:52321159-52321178 Msa0410650:three_prime_UTR 45.0%
TCTCTTGTAAAAAGGACCGG+AGG - chr3_2:52322097-52322116 Msa0410650:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG - chr3_2:52322098-52322117 Msa0410650:intron 45.0%
TACAATGTCTCAGAGCTCTG+AGG - chr3_2:52322386-52322405 Msa0410650:intron 45.0%
ACAAGTGAACTTCTCATCCG+AGG + chr3_2:52322499-52322518 None:intergenic 45.0%
AACTCCTGCAACATGCTTCT+GGG - chr3_2:52322562-52322581 Msa0410650:CDS 45.0%
CCATCGGAACCAACTGATAA+CGG - chr3_2:52322684-52322703 Msa0410650:intron 45.0%
! ATGAGCAGTTTGTTTGGCCT+TGG - chr3_2:52322745-52322764 Msa0410650:intron 45.0%
!! CAGTTTGTTTGGCCTTGGAT+TGG - chr3_2:52322750-52322769 Msa0410650:intron 45.0%
TTAGGGATGAGTATAGACGC+AGG - chr3_2:52322841-52322860 Msa0410650:intron 45.0%
TAGGGATGAGTATAGACGCA+GGG - chr3_2:52322842-52322861 Msa0410650:intron 45.0%
!! CACAGAGGATTGACTCGATA+TGG + chr3_2:52322876-52322895 None:intergenic 45.0%
CATATCGAGTCAATCCTCTG+TGG - chr3_2:52322874-52322893 Msa0410650:intron 45.0%
AATCCTCTGTGGAATTTCCG+AGG - chr3_2:52322885-52322904 Msa0410650:intron 45.0%
GCAAGTGCATTATCTAAGCC+GGG + chr3_2:52322951-52322970 None:intergenic 45.0%
GCATATGCATCAGACCATCA+CGG - chr3_2:52322981-52323000 Msa0410650:intron 45.0%
CATATGCATCAGACCATCAC+GGG - chr3_2:52322982-52323001 Msa0410650:intron 45.0%
ATCAGACCATCACGGGAAAA+AGG - chr3_2:52322989-52323008 Msa0410650:intron 45.0%
ACCATCACGGGAAAAAGGAT+TGG - chr3_2:52322994-52323013 Msa0410650:intron 45.0%
! ACCAATCCTTTTTCCCGTGA+TGG + chr3_2:52322998-52323017 None:intergenic 45.0%
GTTAATACAGAGCCGAAGTC+GGG - chr3_2:52323020-52323039 Msa0410650:intron 45.0%
CATGCATAAAGACCCGACTT+CGG + chr3_2:52323035-52323054 None:intergenic 45.0%
GAAGTCGGGTCTTTATGCAT+GGG - chr3_2:52323034-52323053 Msa0410650:intron 45.0%
GCTTGTTCTTCCTGAAGTTC+AGG + chr3_2:52323137-52323156 None:intergenic 45.0%
ATCAGGACTTGTGGTAGTTG+TGG - chr3_2:52323355-52323374 Msa0410650:intron 45.0%
TCAGGACTTGTGGTAGTTGT+GGG - chr3_2:52323356-52323375 Msa0410650:intron 45.0%
TGGTTATACAACTGCCAGTG+TGG - chr3_2:52323468-52323487 Msa0410650:intron 45.0%
TTATACAACTGCCAGTGTGG+TGG - chr3_2:52323471-52323490 Msa0410650:intron 45.0%
ACAATTAAGGGGGATCTGAC+AGG - chr3_2:52323525-52323544 Msa0410650:intron 45.0%
GGAAATAGCCACATACTGCT+AGG - chr3_2:52323551-52323570 Msa0410650:intron 45.0%
GCAATGATCCTAGCAGTATG+TGG + chr3_2:52323562-52323581 None:intergenic 45.0%
GTGCTAAGGATCACTTCCAA+AGG - chr3_2:52323761-52323780 Msa0410650:intron 45.0%
CGAAAAGCTTAAGTCGCAAC+TGG - chr3_2:52323798-52323817 Msa0410650:intron 45.0%
AGAAAAGTGAGCTTGAGTCG+CGG - chr3_2:52323827-52323846 Msa0410650:intron 45.0%
CCAATCATAGTATGCCAGAG+GGG + chr3_2:52323951-52323970 None:intergenic 45.0%
CCCAATCATAGTATGCCAGA+GGG + chr3_2:52323952-52323971 None:intergenic 45.0%
CCCTCTGGCATACTATGATT+GGG - chr3_2:52323949-52323968 Msa0410650:CDS 45.0%
TCCCAATCATAGTATGCCAG+AGG + chr3_2:52323953-52323972 None:intergenic 45.0%
AAATGGCGAACTCCAATGAG+TGG - chr3_2:52324507-52324526 Msa0410650:intron 45.0%
! TTTTCCTCCCTCCAATTTGG+GGG - chr3_2:52324664-52324683 Msa0410650:CDS 45.0%
TTACTCCCATACCCCCAAAT+TGG + chr3_2:52324678-52324697 None:intergenic 45.0%
TTGCTTCAGAAGCTTGCAGA+AGG - chr3_2:52324826-52324845 Msa0410650:intron 45.0%
GAAACTGGCTGAAGATCAGA+AGG - chr3_2:52324954-52324973 Msa0410650:CDS 45.0%
! TGATCAAAAGCGTGCTTGTC+AGG - chr3_2:52325007-52325026 Msa0410650:CDS 45.0%
TTGTCAGGTTCAGAGTAGCA+TGG - chr3_2:52325022-52325041 Msa0410650:intron 45.0%
TCTGCATGCGAAGATGTATC+TGG + chr3_2:52325382-52325401 None:intergenic 45.0%
TACATCTTCGCATGCAGAAG+AGG - chr3_2:52325384-52325403 Msa0410650:intron 45.0%
ACTGTCCAACGTCACTTGAA+AGG - chr3_2:52325678-52325697 Msa0410650:intron 45.0%
! GTGAACCTTTCAAGTGACGT+TGG + chr3_2:52325686-52325705 None:intergenic 45.0%
TCTGTGTTTGAAAGCTCGGA+AGG - chr3_2:52326416-52326435 Msa0410650:intron 45.0%
!! ACCAAAATGAGTGGTAGTGG+GGG - chr3_2:52326575-52326594 Msa0410650:intron 45.0%
! GGGGAGTAGGAATTAGTTTG+TGG - chr3_2:52326595-52326614 Msa0410650:intron 45.0%
AAACTGTCCTAAAGCAGTGG+GGG + chr3_2:52327124-52327143 None:intergenic 45.0%
! TGAAAAGGCATATAGTGCCG+TGG - chr3_2:52327322-52327341 Msa0410650:CDS 45.0%
GAGGTTACATATCTCCCACT+AGG + chr3_2:52327380-52327399 None:intergenic 45.0%
AGGAGAGCAACTTTGCAAGA+AGG - chr3_2:52327425-52327444 Msa0410650:CDS 45.0%
TGCTGGAAACGCAAGAAGAA+AGG - chr3_2:52327467-52327486 Msa0410650:CDS 45.0%
GGCGATGATTAGAATGAGAG+AGG - chr3_2:52327695-52327714 Msa0410650:intron 45.0%
AGAATGAGAGAGGCCTTAAG+TGG - chr3_2:52327705-52327724 Msa0410650:intron 45.0%
GAATGAGAGAGGCCTTAAGT+GGG - chr3_2:52327706-52327725 Msa0410650:intron 45.0%
!! ACTGGTTTCGGATTTTCCGA+TGG + chr3_2:52327744-52327763 None:intergenic 45.0%
ATTCCATCTCTACGGTTGTC+CGG + chr3_2:52328256-52328275 None:intergenic 45.0%
! AATAATTTGTGCATGGCGGC+TGG - chr3_2:52328552-52328571 Msa0410650:intron 45.0%
GAGCTGCAAACCGAAGATTA+AGG - chr3_2:52328597-52328616 Msa0410650:intron 45.0%
!!! TTTATGTAATTTTTAATTTT+TGG - chr3_2:52328357-52328376 Msa0410650:intron 5.0%
! GACAGGATTTAGGGCCTGTT+TGG - chr3_2:52321876-52321895 Msa0410650:intron 50.0%
!! AATGTCTCAGAGCTCTGAGG+AGG - chr3_2:52322389-52322408 Msa0410650:intron 50.0%
GAACTCCTGCAACATGCTTC+TGG - chr3_2:52322561-52322580 Msa0410650:CDS 50.0%
ACTCCTGCAACATGCTTCTG+GGG - chr3_2:52322563-52322582 Msa0410650:CDS 50.0%
! CCGTTATCAGTTGGTTCCGA+TGG + chr3_2:52322687-52322706 None:intergenic 50.0%
GGCTAGTGGTTCCAAGCTTA+GGG - chr3_2:52322824-52322843 Msa0410650:intron 50.0%
AGGGATGAGTATAGACGCAG+GGG - chr3_2:52322843-52322862 Msa0410650:intron 50.0%
TGACCTCGGAAATTCCACAG+AGG + chr3_2:52322891-52322910 None:intergenic 50.0%
TGGAATTTCCGAGGTCACTC+TGG - chr3_2:52322894-52322913 Msa0410650:intron 50.0%
CGAAGTCGGGTCTTTATGCA+TGG - chr3_2:52323033-52323052 Msa0410650:intron 50.0%
GGAAGAACAAGCTCGAAAGC+AGG - chr3_2:52323145-52323164 Msa0410650:intron 50.0%
! TGTGGTGGTTTCTGGACCAA+TGG - chr3_2:52323486-52323505 Msa0410650:intron 50.0%
! GTGGTGGTTTCTGGACCAAT+GGG - chr3_2:52323487-52323506 Msa0410650:intron 50.0%
TGAGTCGCGGAGAATCACAT+TGG - chr3_2:52323840-52323859 Msa0410650:intron 50.0%
GTTGCTAGAAGAGATGGAGG+AGG - chr3_2:52323900-52323919 Msa0410650:CDS 50.0%
! GATTTTTGCTCCATCCCCTC+TGG - chr3_2:52323934-52323953 Msa0410650:CDS 50.0%
TCATAGTATGCCAGAGGGGA+TGG + chr3_2:52323947-52323966 None:intergenic 50.0%
CCCCTCTGGCATACTATGAT+TGG - chr3_2:52323948-52323967 Msa0410650:CDS 50.0%
TCTGGAAAGAGTCGGAAGAC+TGG - chr3_2:52324208-52324227 Msa0410650:intron 50.0%
! TCCCTCCAATTTGGGGGTAT+GGG - chr3_2:52324670-52324689 Msa0410650:CDS 50.0%
TCCCATACCCCCAAATTGGA+GGG + chr3_2:52324674-52324693 None:intergenic 50.0%
CTCTCTTCAGATGGCTTCTC+TGG - chr3_2:52324903-52324922 Msa0410650:intron 50.0%
GCATATGGGTTTGAGGGAGA+AGG - chr3_2:52325241-52325260 Msa0410650:intron 50.0%
AGAATGGGGGAACTTGACAC+TGG - chr3_2:52325885-52325904 Msa0410650:intron 50.0%
!! CCAAAATGAGTGGTAGTGGG+GGG - chr3_2:52326576-52326595 Msa0410650:intron 50.0%
TAAAAGCAGGAGAGGAAGGG+TGG - chr3_2:52326628-52326647 Msa0410650:CDS 50.0%
TCATTTCCCCCCACTGCTTT+AGG - chr3_2:52327114-52327133 Msa0410650:CDS 50.0%
AACTGTCCTAAAGCAGTGGG+GGG + chr3_2:52327123-52327142 None:intergenic 50.0%
! AAAGGCATATAGTGCCGTGG+TGG - chr3_2:52327325-52327344 Msa0410650:CDS 50.0%
TGCCGTGGTGGCATCTTTAA+CGG - chr3_2:52327337-52327356 Msa0410650:CDS 50.0%
CTCCGTTAAAGATGCCACCA+CGG + chr3_2:52327342-52327361 None:intergenic 50.0%
CAAAGCCAAACCCTTTGGTG+GGG + chr3_2:52327839-52327858 None:intergenic 50.0%
CCAAAGCCAAACCCTTTGGT+GGG + chr3_2:52327840-52327859 None:intergenic 50.0%
ACCAAAGCCAAACCCTTTGG+TGG + chr3_2:52327841-52327860 None:intergenic 50.0%
GACACCAAAGCCAAACCCTT+TGG + chr3_2:52327844-52327863 None:intergenic 50.0%
TGTTGAAATTGAGCAGCGGC+CGG - chr3_2:52328234-52328253 Msa0410650:intron 50.0%
!! CTGCAACATGCTTCTGGGGT+GGG - chr3_2:52322567-52322586 Msa0410650:CDS 55.0%
CCATCTTGTGCCCTGCTAGT+GGG + chr3_2:52322792-52322811 None:intergenic 55.0%
CCACTAGCAGGGCACAAGAT+GGG - chr3_2:52322790-52322809 Msa0410650:intron 55.0%
! CACAAGATGGGCGTGCTGTT+GGG - chr3_2:52322802-52322821 Msa0410650:intron 55.0%
! ACAAGATGGGCGTGCTGTTG+GGG - chr3_2:52322803-52322822 Msa0410650:intron 55.0%
! GGGCTAGTGGTTCCAAGCTT+AGG - chr3_2:52322823-52322842 Msa0410650:intron 55.0%
GCAACTTGCAACTGGCGCTT+TGG - chr3_2:52323448-52323467 Msa0410650:intron 55.0%
ACTGCCAGTGTGGTGGTTTC+TGG - chr3_2:52323478-52323497 Msa0410650:intron 55.0%
TGGTCCAGAAACCACCACAC+TGG + chr3_2:52323485-52323504 None:intergenic 55.0%
TAAGGGGGATCTGACAGGTC+CGG - chr3_2:52323530-52323549 Msa0410650:intron 55.0%
CACAAGTGACGTGGAACGGA+TGG - chr3_2:52324449-52324468 Msa0410650:intron 55.0%
CATACCCCCAAATTGGAGGG+AGG + chr3_2:52324671-52324690 None:intergenic 55.0%
CTCCCTCCAATTTGGGGGTA+TGG - chr3_2:52324669-52324688 Msa0410650:CDS 55.0%
CTCCCATACCCCCAAATTGG+AGG + chr3_2:52324675-52324694 None:intergenic 55.0%
ATGACCAGACAGCCAAGCGT+AGG - chr3_2:52326329-52326348 Msa0410650:intron 55.0%
! CCCCCCACTACCACTCATTT+TGG + chr3_2:52326579-52326598 None:intergenic 55.0%
AACCCTTTGGTGGGGTGTGA+CGG + chr3_2:52327831-52327850 None:intergenic 55.0%
TCACACCCCACCAAAGGGTT+TGG - chr3_2:52327831-52327850 Msa0410650:intron 55.0%
! CCCACCAAAGGGTTTGGCTT+TGG - chr3_2:52327837-52327856 Msa0410650:intron 55.0%
! CCACCCCAGAAGCATGTTGC+AGG + chr3_2:52322569-52322588 None:intergenic 60.0%
! CCTGCAACATGCTTCTGGGG+TGG - chr3_2:52322566-52322585 Msa0410650:CDS 60.0%
CCCACTAGCAGGGCACAAGA+TGG - chr3_2:52322789-52322808 Msa0410650:intron 60.0%
CCCATCTTGTGCCCTGCTAG+TGG + chr3_2:52322793-52322812 None:intergenic 60.0%
GCACAAGATGGGCGTGCTGT+TGG - chr3_2:52322801-52322820 Msa0410650:intron 60.0%
CAGTTACTGGCGCCTACGCT+TGG + chr3_2:52326344-52326363 None:intergenic 60.0%
!! TGAGTGGTAGTGGGGGGAGT+AGG - chr3_2:52326582-52326601 Msa0410650:intron 60.0%
TGCCGTCACACCCCACCAAA+GGG - chr3_2:52327826-52327845 Msa0410650:intron 60.0%
GGGCGGTACCAGAGTGACCT+CGG + chr3_2:52322905-52322924 None:intergenic 65.0%
GTGCCGTCACACCCCACCAA+AGG - chr3_2:52327825-52327844 Msa0410650:intron 65.0%
CGGCCGGACAACCGTAGAGA+TGG - chr3_2:52328250-52328269 Msa0410650:intron 65.0%
! GGGCGTGCTGTTGGGGCTAG+TGG - chr3_2:52322810-52322829 Msa0410650:intron 70.0%
GGCGCCTACGCTTGGCTGTC+TGG + chr3_2:52326336-52326355 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 52321021 52328894 52321021 ID=Msa0410650;Name=Msa0410650
chr3_2 mRNA 52321021 52328894 52321021 ID=Msa0410650-mRNA-1;Parent=Msa0410650;Name=Msa0410650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=240|1|1|1|0.71|0.5|8|372|640
chr3_2 exon 52321021 52321390 52321021 ID=Msa0410650-mRNA-1:exon:10371;Parent=Msa0410650-mRNA-1
chr3_2 exon 52322414 52322646 52322414 ID=Msa0410650-mRNA-1:exon:10370;Parent=Msa0410650-mRNA-1
chr3_2 exon 52323863 52324072 52323863 ID=Msa0410650-mRNA-1:exon:10369;Parent=Msa0410650-mRNA-1
chr3_2 exon 52324551 52324838 52324551 ID=Msa0410650-mRNA-1:exon:10368;Parent=Msa0410650-mRNA-1
chr3_2 exon 52324940 52325029 52324940 ID=Msa0410650-mRNA-1:exon:10367;Parent=Msa0410650-mRNA-1
chr3_2 exon 52325994 52326175 52325994 ID=Msa0410650-mRNA-1:exon:10366;Parent=Msa0410650-mRNA-1
chr3_2 exon 52326604 52327552 52326604 ID=Msa0410650-mRNA-1:exon:10365;Parent=Msa0410650-mRNA-1
chr3_2 exon 52328682 52328894 52328682 ID=Msa0410650-mRNA-1:exon:10364;Parent=Msa0410650-mRNA-1
chr3_2 five_prime_UTR 52328682 52328894 52328682 ID=Msa0410650-mRNA-1:five_prime_utr;Parent=Msa0410650-mRNA-1
chr3_2 five_prime_UTR 52327526 52327552 52327526 ID=Msa0410650-mRNA-1:five_prime_utr;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52326604 52327525 52326604 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52325994 52326175 52325994 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52324940 52325029 52324940 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52324551 52324838 52324551 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52323863 52324072 52323863 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 CDS 52322416 52322646 52322416 ID=Msa0410650-mRNA-1:cds;Parent=Msa0410650-mRNA-1
chr3_2 three_prime_UTR 52322414 52322415 52322414 ID=Msa0410650-mRNA-1:three_prime_utr;Parent=Msa0410650-mRNA-1
chr3_2 three_prime_UTR 52321021 52321390 52321021 ID=Msa0410650-mRNA-1:three_prime_utr;Parent=Msa0410650-mRNA-1
Gene Sequence

>Msa0410650

ATGTCTCAGAGCTCTGAGGAGGATACTGATATAAGTGATTCTGAGATAAGTGAGTATGAGGAAAAATGTTATGAAGAACTGAAAAGTGGAAGTCAGAATGTGAAAACCTCGGATGAGAAGTTCACTTGTCCATACTGTCCTAAGAAAAGAAAACGGGATTATTTGTACAACGAACTCCTGCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAGAAGAGAAAGCCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTTATGAATATAGATACTCCATCGGAACCAACTGATAACGGTGCTGATAACGGTGACACAGACACTTCTATTGATTCTGATGAGCAGTTTGTTTGGCCTTGGATTGGAGTTATAGTTAATATTCCCACTAGCAGGGCACAAGATGGGCGTGCTGTTGGGGCTAGTGGTTCCAAGCTTAGGGATGAGTATAGACGCAGGGGTTTCAATCCATATCGAGTCAATCCTCTGTGGAATTTCCGAGGTCACTCTGGTACCGCCCTTGTAGAATTCTATAAAGACTGGCCCGGCTTAGATAATGCACTTGCATTTGAAAAAGCATATGCATCAGACCATCACGGGAAAAAGGATTGGTTTGTTAATACAGAGCCGAAGTCGGGTCTTTATGCATGGGTTGCCCGAGCTGATGACTACAAAAAGAACAATATCATTGGTGAATATCTGCGAAAGATGGGCGATATCAAAACCATACCTGAACTTCAGGAAGAACAAGCTCGAAAGCAGGATAAACTCGTGTCCAATTTGACCAACATTATTGAGGTCAAAAACAAGCACTTAATTGAGATAGAAGCAAGATGCACTGAGACTACAGCCAAAATGAATTCTGCTATGACAGAAAAAGATCAGCTCATTCAAGCTTATAATGAAGAGATAAAGAAAATACAGTCAAGTGCTAAGGATCACTTCCAAAGGATTTTTAATGATCACGAAAAGCTTAAGTCGCAACTGGAAACTCAGAAAAGTGAGCTTGAGTCGCGGAGAATCACATTGGAAAAGCGTGAAGCACATAATGAAAGTGAAAGAAGAAAGTTGCTAGAAGAGATGGAGGAGAATGCAACGAGAAATAGCTCTCTTCAGATGGCTTCTCTGGAGCAACAGAAAGCAGATATAAATGTTATGAAACTGGCTGAAGATCAGAAGAAACAAAAAGAACAGCTCCATGCTAAAATCATTCAGCTTGAAAGACAACTGGATATGAAACAAAAGCTGGAACTGGAGATTCAGCAACTAAAAGGATCACTAAGTGTGTTGAAGCACATAGAAGATGACGAAGATGTAGAAGTTTTGAAGAAGGTAGATGATTTGCATATGGGTTTGAGGGAGAAGGAACAGTCTCTTCAAGACTTAGATGCACTGAACCAAACACTAATCATCAAGGAGCGTAAGAGTAACGATGAACTGCAGGATGCTCGAAAAGAATTGATTAATGGCATTAAAGATATAGGTACTCGAGTCCATATTGGTGTGAAGAGAATGGGGGAACTTGACACTGGACCGTTCCTTGAAGCTATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGACAAAGCTTCAGAACTATGTTCATTGTGGGAAGAGTATCTAAAAGACCCAGATTGGCATCCATTCAAAGTTGTCATGATTGAAGGGAAAGAAAAGGAAATTATTAAAGATGACGATGAAAAGCTGAATGGACTGAGAAAAGAAGTGGGTGAAAAGGCATATAGTGCCGTGGTGGCATCTTTAACGGAGATTAATGAATATAATCCTAGTGGGAGATATGTAACCTCAGAGTTATGGAACTATAAAGCGGGAAGGAGAGCAACTTTGCAAGAAGGAGTGAAGTTTTTGTTGGACTGCTGGAAACGCAAGAAGAAAGGAATGTTGTGA

Protein sequence

>Msa0410650

MSQSSEEDTDISDSEISEYEEKCYEELKSGSQNVKTSDEKFTCPYCPKKRKRDYLYNELLQHASGVGQSSSQKRKPREKATHLALVKYLEKDLMNIDTPSEPTDNGADNGDTDTSIDSDEQFVWPWIGVIVNIPTSRAQDGRAVGASGSKLRDEYRRRGFNPYRVNPLWNFRGHSGTALVEFYKDWPGLDNALAFEKAYASDHHGKKDWFVNTEPKSGLYAWVARADDYKKNNIIGEYLRKMGDIKTIPELQEEQARKQDKLVSNLTNIIEVKNKHLIEIEARCTETTAKMNSAMTEKDQLIQAYNEEIKKIQSSAKDHFQRIFNDHEKLKSQLETQKSELESRRITLEKREAHNESERRKLLEEMEENATRNSSLQMASLEQQKADINVMKLAEDQKKQKEQLHAKIIQLERQLDMKQKLELEIQQLKGSLSVLKHIEDDEDVEVLKKVDDLHMGLREKEQSLQDLDALNQTLIIKERKSNDELQDARKELINGIKDIGTRVHIGVKRMGELDTGPFLEAMKKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMIEGKEKEIIKDDDEKLNGLRKEVGEKAYSAVVASLTEINEYNPSGRYVTSELWNYKAGRRATLQEGVKFLLDCWKRKKKGML*