Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006880 | XP_003621193.1 | 92.638 | 326 | 18 | 4 | 17 | 340 | 20 | 341 | 5.18e-179 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006880 | sp|Q9LXG0|ZHD8_ARATH | 49.446 | 271 | 102 | 9 | 22 | 284 | 3 | 246 | 2.81e-69 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006880 | A2Q1B8 | 92.638 | 326 | 18 | 4 | 17 | 340 | 20 | 341 | 2.47e-179 | 509 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1006880 | TF | zf-HD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0206130 | Msa1006880 | 0.830540 | 2.772133e-55 | -8.615850e-47 |
| Msa0404870 | Msa1006880 | 0.808760 | 2.643742e-50 | -8.615850e-47 |
| Msa1006880 | Msa1135850 | 0.916314 | 2.067092e-85 | -8.615850e-47 |
| Msa0358710 | Msa1006880 | 0.812003 | 5.275374e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006880 | MtrunA17_Chr7g0217231 | 92.638 | 326 | 18 | 4 | 17 | 340 | 20 | 341 | 0.0 | 509 |
| Msa1006880 | MtrunA17_Chr6g0453231 | 62.835 | 261 | 80 | 6 | 35 | 286 | 36 | 288 | 7.30e-79 | 244 |
| Msa1006880 | MtrunA17_Chr1g0188441 | 44.828 | 203 | 86 | 6 | 84 | 282 | 6 | 186 | 1.76e-52 | 171 |
| Msa1006880 | MtrunA17_Chr5g0404271 | 43.062 | 209 | 100 | 7 | 85 | 283 | 97 | 296 | 3.27e-48 | 164 |
| Msa1006880 | MtrunA17_Chr3g0133181 | 43.478 | 207 | 95 | 5 | 84 | 280 | 77 | 271 | 1.09e-47 | 162 |
| Msa1006880 | MtrunA17_Chr5g0412501 | 44.811 | 212 | 83 | 7 | 87 | 282 | 78 | 271 | 1.07e-46 | 159 |
| Msa1006880 | MtrunA17_Chr4g0076821 | 40.928 | 237 | 98 | 9 | 87 | 283 | 113 | 347 | 6.31e-45 | 157 |
| Msa1006880 | MtrunA17_Chr5g0427051 | 39.655 | 232 | 104 | 6 | 76 | 282 | 47 | 267 | 6.83e-45 | 154 |
| Msa1006880 | MtrunA17_Chr2g0315941 | 38.249 | 217 | 96 | 6 | 87 | 282 | 68 | 267 | 6.13e-40 | 141 |
| Msa1006880 | MtrunA17_Chr6g0479901 | 38.860 | 193 | 66 | 5 | 87 | 278 | 19 | 160 | 1.66e-37 | 132 |
| Msa1006880 | MtrunA17_Chr8g0367691 | 35.345 | 232 | 108 | 7 | 72 | 278 | 49 | 263 | 5.48e-36 | 131 |
| Msa1006880 | MtrunA17_Chr8g0361671 | 75.410 | 61 | 15 | 0 | 84 | 144 | 61 | 121 | 8.88e-27 | 109 |
| Msa1006880 | MtrunA17_Chr8g0357741 | 59.701 | 67 | 26 | 1 | 216 | 282 | 31 | 96 | 2.63e-19 | 81.6 |
| Msa1006880 | MtrunA17_Chr3g0092371 | 56.338 | 71 | 23 | 2 | 85 | 155 | 18 | 80 | 1.07e-17 | 77.0 |
| Msa1006880 | MtrunA17_Chr6g0453221 | 57.895 | 57 | 18 | 1 | 81 | 137 | 15 | 65 | 9.44e-16 | 71.6 |
| Msa1006880 | MtrunA17_Chr4g0060731 | 48.438 | 64 | 28 | 1 | 75 | 138 | 13 | 71 | 1.03e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006880 | AT5G15210.1 | 49.446 | 271 | 102 | 9 | 22 | 284 | 3 | 246 | 2.86e-70 | 220 |
| Msa1006880 | AT1G69600.1 | 53.659 | 205 | 67 | 5 | 85 | 279 | 29 | 215 | 2.89e-65 | 206 |
| Msa1006880 | AT3G28920.1 | 49.829 | 293 | 98 | 9 | 32 | 298 | 12 | 281 | 8.25e-63 | 202 |
| Msa1006880 | AT5G39760.1 | 47.778 | 270 | 108 | 7 | 32 | 287 | 17 | 267 | 1.28e-55 | 184 |
| Msa1006880 | AT1G14440.1 | 43.363 | 226 | 105 | 5 | 82 | 298 | 85 | 296 | 8.67e-53 | 177 |
| Msa1006880 | AT1G14440.2 | 43.363 | 226 | 105 | 5 | 82 | 298 | 85 | 296 | 8.67e-53 | 177 |
| Msa1006880 | AT2G02540.2 | 42.152 | 223 | 108 | 6 | 84 | 294 | 84 | 297 | 5.87e-51 | 172 |
| Msa1006880 | AT2G02540.1 | 42.152 | 223 | 108 | 6 | 84 | 294 | 84 | 297 | 5.87e-51 | 172 |
| Msa1006880 | AT4G24660.1 | 45.455 | 198 | 83 | 4 | 85 | 282 | 47 | 219 | 3.36e-50 | 167 |
| Msa1006880 | AT4G24660.2 | 45.641 | 195 | 81 | 4 | 85 | 279 | 47 | 216 | 3.10e-49 | 165 |
| Msa1006880 | AT5G60480.1 | 43.939 | 198 | 78 | 5 | 84 | 276 | 34 | 203 | 1.92e-48 | 162 |
| Msa1006880 | AT5G65410.1 | 43.655 | 197 | 94 | 5 | 85 | 281 | 73 | 252 | 1.18e-44 | 154 |
| Msa1006880 | AT1G75240.1 | 38.559 | 236 | 104 | 4 | 82 | 281 | 71 | 301 | 1.67e-44 | 155 |
| Msa1006880 | AT2G18350.1 | 39.899 | 198 | 100 | 4 | 87 | 283 | 82 | 261 | 3.34e-41 | 145 |
| Msa1006880 | AT3G50890.1 | 39.252 | 214 | 99 | 8 | 87 | 293 | 60 | 249 | 1.49e-35 | 130 |
| Msa1006880 | AT5G42780.1 | 35.204 | 196 | 103 | 5 | 87 | 279 | 64 | 238 | 3.36e-28 | 110 |
| Msa1006880 | AT1G14687.1 | 28.283 | 198 | 106 | 4 | 82 | 277 | 2 | 165 | 4.59e-20 | 86.3 |
| Msa1006880 | AT1G74660.1 | 53.521 | 71 | 25 | 2 | 85 | 155 | 37 | 99 | 4.49e-19 | 81.6 |
| Msa1006880 | AT1G74660.2 | 61.111 | 54 | 19 | 1 | 85 | 138 | 37 | 88 | 8.01e-19 | 80.9 |
| Msa1006880 | AT1G18835.1 | 54.930 | 71 | 21 | 2 | 85 | 155 | 24 | 83 | 1.62e-17 | 77.0 |
| Msa1006880 | AT3G28917.1 | 61.404 | 57 | 21 | 1 | 84 | 140 | 30 | 85 | 2.91e-17 | 76.6 |
Find 94 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGTGTTGGTGTTGGAGTT+GGG | 0.196157 | 7_1:+5874331 | None:intergenic |
| ACAATTCTAGAAAGCGTTTC+AGG | 0.216225 | 7_1:-5873699 | Msa1006880:CDS |
| TTGAGAACACCATTTGAAAA+AGG | 0.255600 | 7_1:+5874183 | None:intergenic |
| TGTTGTTGAGGTTGTTGATA+TGG | 0.267584 | 7_1:+5874287 | None:intergenic |
| GGTGGTGTTGGTGTTGGAGT+TGG | 0.272963 | 7_1:+5874330 | None:intergenic |
| AGGGGCGGAGGGGTAGTAAG+AGG | 0.274253 | 7_1:+5873804 | None:intergenic |
| TGCTCTCTCCGCCGCCTTAC+CGG | 0.274469 | 7_1:-5873770 | Msa1006880:CDS |
| GGTGGTGGTGAGGAGGAATT+TGG | 0.278567 | 7_1:+5873835 | None:intergenic |
| GAGACATTCTTTGTAGGTTA+TGG | 0.295956 | 7_1:+5874098 | None:intergenic |
| GTGGAAAGTGGTGGTTCTTC+AGG | 0.318129 | 7_1:+5873934 | None:intergenic |
| TGTAGGTTATGGTGGGTTGA+TGG | 0.319220 | 7_1:+5874109 | None:intergenic |
| TCAGTTTCATGATGTTGTTC+TGG | 0.327363 | 7_1:+5874249 | None:intergenic |
| TAATATTCTCATTGTTGTTA+AGG | 0.328995 | 7_1:+5873497 | None:intergenic |
| TGGTGTTGGAGTTGGGGTTA+AGG | 0.330499 | 7_1:+5874338 | None:intergenic |
| TATGGTGGGTTGATGGTTGT+TGG | 0.331136 | 7_1:+5874116 | None:intergenic |
| ATCGTAGTGTTCTTAAGGTT+TGG | 0.334173 | 7_1:-5873558 | Msa1006880:CDS |
| GGTTGAAGTGGTGGTGGTGG+TGG | 0.346158 | 7_1:+5874151 | None:intergenic |
| TTCATCAACATGGTTTGGTT+TGG | 0.350778 | 7_1:+5873733 | None:intergenic |
| TGTTGATCGTAGTGTTCTTA+AGG | 0.355414 | 7_1:-5873563 | Msa1006880:CDS |
| CAGAATGAAGGTGGAGTTGT+TGG | 0.373866 | 7_1:-5873388 | Msa1006880:CDS |
| GGAGTAACTGTTCGTGCTAA+TGG | 0.375764 | 7_1:-5873367 | Msa1006880:CDS |
| AAGAAGCATGTGAGGGGCGG+AGG | 0.375917 | 7_1:+5873792 | None:intergenic |
| GAGAATTCATCAACATGGTT+TGG | 0.380377 | 7_1:+5873728 | None:intergenic |
| CACAAGAATGTTGAGATTCA+TGG | 0.386670 | 7_1:-5873430 | Msa1006880:CDS |
| ATTTGGGCTCCGGTGGGAAA+AGG | 0.392682 | 7_1:+5873852 | None:intergenic |
| GTTGGTGGTGGTGTTGGTGT+TGG | 0.400036 | 7_1:+5874324 | None:intergenic |
| TGGTGTTGGTGTTGGAGTTG+GGG | 0.405042 | 7_1:+5874332 | None:intergenic |
| CTGAAATTTGCTGAGAAAGT+TGG | 0.415196 | 7_1:-5873643 | Msa1006880:CDS |
| TGAATTCACCACAACCATCT+AGG | 0.423468 | 7_1:+5874043 | None:intergenic |
| ATTGATGTTGGTGGTGGTGT+TGG | 0.426088 | 7_1:+5874318 | None:intergenic |
| CGGTGGGAAAAGGGTGGTGG+TGG | 0.426898 | 7_1:+5873862 | None:intergenic |
| GAAAAGGGTGGTGGTGGAAG+TGG | 0.427112 | 7_1:+5873868 | None:intergenic |
| TTGTTCTGGTGATTTAGTTA+AGG | 0.427703 | 7_1:+5874263 | None:intergenic |
| CTCCGGTGGGAAAAGGGTGG+TGG | 0.429757 | 7_1:+5873859 | None:intergenic |
| GGTGGTTGAAGTGGTGGTGG+TGG | 0.435301 | 7_1:+5874148 | None:intergenic |
| GGAGGAGATCGGTGGTGGTG+AGG | 0.437213 | 7_1:+5873825 | None:intergenic |
| GGGTAGTAAGAGGAGGAGAT+CGG | 0.438670 | 7_1:+5873814 | None:intergenic |
| GGCGGAGGGGTAGTAAGAGG+AGG | 0.440166 | 7_1:+5873807 | None:intergenic |
| GTGGTGGTGAGGAGGAATTT+GGG | 0.444504 | 7_1:+5873836 | None:intergenic |
| CTAGGTGGTCATGCCCTAGA+TGG | 0.446320 | 7_1:-5874057 | Msa1006880:CDS |
| ACATTCTTTGTAGGTTATGG+TGG | 0.457146 | 7_1:+5874101 | None:intergenic |
| GGGCTCCGGTGGGAAAAGGG+TGG | 0.457386 | 7_1:+5873856 | None:intergenic |
| GTTCACGGCGGTGGAAGTTA+CGG | 0.458240 | 7_1:+5873956 | None:intergenic |
| GTTGAGGTTGTTGATATGGT+TGG | 0.459741 | 7_1:+5874291 | None:intergenic |
| TTTAAGGATGTTGGGTCGGT+TGG | 0.464594 | 7_1:+5874000 | None:intergenic |
| TGAAATTTGCTGAGAAAGTT+GGG | 0.467964 | 7_1:-5873642 | Msa1006880:CDS |
| GGGTCGGTTGGTGTTGCTGT+GGG | 0.476226 | 7_1:+5874012 | None:intergenic |
| TGTGGTGGTTGAAGTGGTGG+TGG | 0.478966 | 7_1:+5874145 | None:intergenic |
| CATTCTTTGTAGGTTATGGT+GGG | 0.482848 | 7_1:+5874102 | None:intergenic |
| ATGGTTGGTGCTATTGATGT+TGG | 0.483457 | 7_1:+5874306 | None:intergenic |
| GGAGATCGGTGGTGGTGAGG+AGG | 0.490231 | 7_1:+5873828 | None:intergenic |
| CACAATCATTATCAGAATGA+AGG | 0.494541 | 7_1:-5873400 | Msa1006880:CDS |
| AGAAGCATGTGAGGGGCGGA+GGG | 0.495592 | 7_1:+5873793 | None:intergenic |
| GTGGTGGTTCTTCAGGTTCA+CGG | 0.497308 | 7_1:+5873941 | None:intergenic |
| GGTTGTTGGTGTTGTTGTGG+TGG | 0.497322 | 7_1:+5874130 | None:intergenic |
| TAAGAGGAGGAGATCGGTGG+TGG | 0.498462 | 7_1:+5873820 | None:intergenic |
| TGGGGTTAAGGTTATGTCCA+TGG | 0.499789 | 7_1:+5874350 | None:intergenic |
| GTGAGGAGGAATTTGGGCTC+CGG | 0.500275 | 7_1:+5873842 | None:intergenic |
| GTGGTGGAAGTGGTTGATGA+CGG | 0.500583 | 7_1:+5873878 | None:intergenic |
| TTTAGTTAAGGTTGTTGTTG+AGG | 0.502769 | 7_1:+5874275 | None:intergenic |
| AGGAGGAATTTGGGCTCCGG+TGG | 0.505710 | 7_1:+5873845 | None:intergenic |
| TTTGGGCTCCGGTGGGAAAA+GGG | 0.507171 | 7_1:+5873853 | None:intergenic |
| GATGGTTGTTGGTGTTGTTG+TGG | 0.510023 | 7_1:+5874127 | None:intergenic |
| GGTGCTATTGATGTTGGTGG+TGG | 0.518237 | 7_1:+5874312 | None:intergenic |
| GTTGGTGCTATTGATGTTGG+TGG | 0.524202 | 7_1:+5874309 | None:intergenic |
| AACAATGAGAATATTAATGA+TGG | 0.527160 | 7_1:-5873490 | Msa1006880:CDS |
| TGTTGTTGTGGTGGTTGAAG+TGG | 0.528276 | 7_1:+5874139 | None:intergenic |
| GACCACCTAGGTTTGCTGCA+TGG | 0.528612 | 7_1:+5874070 | None:intergenic |
| TGTTGTGGTGGTTGAAGTGG+TGG | 0.528860 | 7_1:+5874142 | None:intergenic |
| GAATTCACCACAACCATCTA+GGG | 0.539304 | 7_1:+5874044 | None:intergenic |
| ACATGAGTTGTGGTGGAAAG+TGG | 0.548946 | 7_1:+5873922 | None:intergenic |
| GAGAGAGCAAGAAGCATGTG+AGG | 0.550052 | 7_1:+5873784 | None:intergenic |
| GAAGCATGTGAGGGGCGGAG+GGG | 0.553313 | 7_1:+5873794 | None:intergenic |
| TGGGTCGGTTGGTGTTGCTG+TGG | 0.558596 | 7_1:+5874011 | None:intergenic |
| TCCTTAAAATGTGCTGCTTG+TGG | 0.574232 | 7_1:-5873985 | Msa1006880:CDS |
| GGTCATGCCCTAGATGGTTG+TGG | 0.575703 | 7_1:-5874051 | Msa1006880:CDS |
| TAGTAAGAGGAGGAGATCGG+TGG | 0.577001 | 7_1:+5873817 | None:intergenic |
| TTGTGTTCTTCATCTTCAAG+AGG | 0.585430 | 7_1:+5873448 | None:intergenic |
| TTCAATGACATGAGTTGTGG+TGG | 0.585624 | 7_1:+5873915 | None:intergenic |
| AGCAAGAAGCATGTGAGGGG+CGG | 0.594492 | 7_1:+5873789 | None:intergenic |
| AGAGAGCAAGAAGCATGTGA+GGG | 0.597359 | 7_1:+5873785 | None:intergenic |
| AATCATTATCAGAATGAAGG+TGG | 0.598316 | 7_1:-5873397 | Msa1006880:CDS |
| GTGGAAGTGGTTGATGACGG+TGG | 0.599219 | 7_1:+5873881 | None:intergenic |
| GAGAGCAAGAAGCATGTGAG+GGG | 0.602424 | 7_1:+5873786 | None:intergenic |
| ATATTCAATGACATGAGTTG+TGG | 0.623812 | 7_1:+5873912 | None:intergenic |
| AGTGGTTGATGACGGTGGTG+AGG | 0.625162 | 7_1:+5873886 | None:intergenic |
| GGAGGAATTTGGGCTCCGGT+GGG | 0.630361 | 7_1:+5873846 | None:intergenic |
| AGAGTGAGAATTCATCAACA+TGG | 0.636406 | 7_1:+5873723 | None:intergenic |
| CATCTAGGGCATGACCACCT+AGG | 0.648371 | 7_1:+5874058 | None:intergenic |
| TGAGTTGTGGTGGAAAGTGG+TGG | 0.661282 | 7_1:+5873925 | None:intergenic |
| CACGGCGGTGGAAGTTACGG+TGG | 0.670619 | 7_1:+5873959 | None:intergenic |
| AACCATGCAGCAAACCTAGG+TGG | 0.685477 | 7_1:-5874072 | Msa1006880:CDS |
| AATTTGCTGAGAAAGTTGGG+TGG | 0.726025 | 7_1:-5873639 | Msa1006880:CDS |
| GTGGTTCTTCAGGTTCACGG+CGG | 0.747111 | 7_1:+5873944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTCTCATTGTTGTTA+AGG | + | chr7_1:5874202-5874221 | None:intergenic | 20.0% |
| !! | AACAATGAGAATATTAATGA+TGG | - | chr7_1:5874206-5874225 | Msa1006880:CDS | 20.0% |
| !!! | TAATATTCTCATTGTTGTTA+AGG | + | chr7_1:5874202-5874221 | None:intergenic | 20.0% |
| !! | AACAATGAGAATATTAATGA+TGG | - | chr7_1:5874206-5874225 | Msa1006880:CDS | 20.0% |
| !! | TTGAAAAAGGTGAGATTTTT+GGG | + | chr7_1:5873503-5873522 | None:intergenic | 25.0% |
| !! | TTTGAAAAAGGTGAGATTTT+TGG | + | chr7_1:5873504-5873523 | None:intergenic | 25.0% |
| !!! | AAAATCTCACCTTTTTCAAA+TGG | - | chr7_1:5873504-5873523 | Msa1006880:CDS | 25.0% |
| !! | TTGAAAAAGGTGAGATTTTT+GGG | + | chr7_1:5873503-5873522 | None:intergenic | 25.0% |
| !! | TTTGAAAAAGGTGAGATTTT+TGG | + | chr7_1:5873504-5873523 | None:intergenic | 25.0% |
| !!! | AAAATCTCACCTTTTTCAAA+TGG | - | chr7_1:5873504-5873523 | Msa1006880:CDS | 25.0% |
| ! | TTTAGTTAAGGTTGTTGTTG+AGG | + | chr7_1:5873424-5873443 | None:intergenic | 30.0% |
| TTGTTCTGGTGATTTAGTTA+AGG | + | chr7_1:5873436-5873455 | None:intergenic | 30.0% | |
| ! | TGAAAAAGGTGAGATTTTTG+GGG | + | chr7_1:5873502-5873521 | None:intergenic | 30.0% |
| TTGAGAACACCATTTGAAAA+AGG | + | chr7_1:5873516-5873535 | None:intergenic | 30.0% | |
| !!! | GTTTTTGAGACATTCTTTGT+AGG | + | chr7_1:5873607-5873626 | None:intergenic | 30.0% |
| ATATTCAATGACATGAGTTG+TGG | + | chr7_1:5873787-5873806 | None:intergenic | 30.0% | |
| !! | TGAAATTTGCTGAGAAAGTT+GGG | - | chr7_1:5874054-5874073 | Msa1006880:CDS | 30.0% |
| !! | CATGAGTTTTGTAATGAGAT+TGG | - | chr7_1:5874110-5874129 | Msa1006880:CDS | 30.0% |
| CACAATCATTATCAGAATGA+AGG | - | chr7_1:5874296-5874315 | Msa1006880:CDS | 30.0% | |
| AATCATTATCAGAATGAAGG+TGG | - | chr7_1:5874299-5874318 | Msa1006880:CDS | 30.0% | |
| ! | TTTAGTTAAGGTTGTTGTTG+AGG | + | chr7_1:5873424-5873443 | None:intergenic | 30.0% |
| TTGTTCTGGTGATTTAGTTA+AGG | + | chr7_1:5873436-5873455 | None:intergenic | 30.0% | |
| ! | TGAAAAAGGTGAGATTTTTG+GGG | + | chr7_1:5873502-5873521 | None:intergenic | 30.0% |
| TTGAGAACACCATTTGAAAA+AGG | + | chr7_1:5873516-5873535 | None:intergenic | 30.0% | |
| !!! | GTTTTTGAGACATTCTTTGT+AGG | + | chr7_1:5873607-5873626 | None:intergenic | 30.0% |
| ATATTCAATGACATGAGTTG+TGG | + | chr7_1:5873787-5873806 | None:intergenic | 30.0% | |
| !! | TGAAATTTGCTGAGAAAGTT+GGG | - | chr7_1:5874054-5874073 | Msa1006880:CDS | 30.0% |
| !! | CATGAGTTTTGTAATGAGAT+TGG | - | chr7_1:5874110-5874129 | Msa1006880:CDS | 30.0% |
| CACAATCATTATCAGAATGA+AGG | - | chr7_1:5874296-5874315 | Msa1006880:CDS | 30.0% | |
| AATCATTATCAGAATGAAGG+TGG | - | chr7_1:5874299-5874318 | Msa1006880:CDS | 30.0% | |
| TGTTGTTGAGGTTGTTGATA+TGG | + | chr7_1:5873412-5873431 | None:intergenic | 35.0% | |
| TCAGTTTCATGATGTTGTTC+TGG | + | chr7_1:5873450-5873469 | None:intergenic | 35.0% | |
| CATTCTTTGTAGGTTATGGT+GGG | + | chr7_1:5873597-5873616 | None:intergenic | 35.0% | |
| ACATTCTTTGTAGGTTATGG+TGG | + | chr7_1:5873598-5873617 | None:intergenic | 35.0% | |
| GAGACATTCTTTGTAGGTTA+TGG | + | chr7_1:5873601-5873620 | None:intergenic | 35.0% | |
| !! | ACATTTTAAGGATGTTGGGT+CGG | + | chr7_1:5873703-5873722 | None:intergenic | 35.0% |
| !! | CAGCACATTTTAAGGATGTT+GGG | + | chr7_1:5873707-5873726 | None:intergenic | 35.0% |
| !! | TTCATCAACATGGTTTGGTT+TGG | + | chr7_1:5873966-5873985 | None:intergenic | 35.0% |
| GAGAATTCATCAACATGGTT+TGG | + | chr7_1:5873971-5873990 | None:intergenic | 35.0% | |
| AGAGTGAGAATTCATCAACA+TGG | + | chr7_1:5873976-5873995 | None:intergenic | 35.0% | |
| !! | ACAATTCTAGAAAGCGTTTC+AGG | - | chr7_1:5873997-5874016 | Msa1006880:CDS | 35.0% |
| !! | CTGAAATTTGCTGAGAAAGT+TGG | - | chr7_1:5874053-5874072 | Msa1006880:CDS | 35.0% |
| TGTTGATCGTAGTGTTCTTA+AGG | - | chr7_1:5874133-5874152 | Msa1006880:CDS | 35.0% | |
| ATCGTAGTGTTCTTAAGGTT+TGG | - | chr7_1:5874138-5874157 | Msa1006880:CDS | 35.0% | |
| ! | GTTGTTAAGGTTTTCTCGTT+TGG | + | chr7_1:5874189-5874208 | None:intergenic | 35.0% |
| TTGTGTTCTTCATCTTCAAG+AGG | + | chr7_1:5874251-5874270 | None:intergenic | 35.0% | |
| CACAAGAATGTTGAGATTCA+TGG | - | chr7_1:5874266-5874285 | Msa1006880:CDS | 35.0% | |
| TGTTGTTGAGGTTGTTGATA+TGG | + | chr7_1:5873412-5873431 | None:intergenic | 35.0% | |
| TCAGTTTCATGATGTTGTTC+TGG | + | chr7_1:5873450-5873469 | None:intergenic | 35.0% | |
| CATTCTTTGTAGGTTATGGT+GGG | + | chr7_1:5873597-5873616 | None:intergenic | 35.0% | |
| ACATTCTTTGTAGGTTATGG+TGG | + | chr7_1:5873598-5873617 | None:intergenic | 35.0% | |
| GAGACATTCTTTGTAGGTTA+TGG | + | chr7_1:5873601-5873620 | None:intergenic | 35.0% | |
| !! | ACATTTTAAGGATGTTGGGT+CGG | + | chr7_1:5873703-5873722 | None:intergenic | 35.0% |
| !! | CAGCACATTTTAAGGATGTT+GGG | + | chr7_1:5873707-5873726 | None:intergenic | 35.0% |
| !! | TTCATCAACATGGTTTGGTT+TGG | + | chr7_1:5873966-5873985 | None:intergenic | 35.0% |
| GAGAATTCATCAACATGGTT+TGG | + | chr7_1:5873971-5873990 | None:intergenic | 35.0% | |
| AGAGTGAGAATTCATCAACA+TGG | + | chr7_1:5873976-5873995 | None:intergenic | 35.0% | |
| !! | ACAATTCTAGAAAGCGTTTC+AGG | - | chr7_1:5873997-5874016 | Msa1006880:CDS | 35.0% |
| !! | CTGAAATTTGCTGAGAAAGT+TGG | - | chr7_1:5874053-5874072 | Msa1006880:CDS | 35.0% |
| TGTTGATCGTAGTGTTCTTA+AGG | - | chr7_1:5874133-5874152 | Msa1006880:CDS | 35.0% | |
| ATCGTAGTGTTCTTAAGGTT+TGG | - | chr7_1:5874138-5874157 | Msa1006880:CDS | 35.0% | |
| ! | GTTGTTAAGGTTTTCTCGTT+TGG | + | chr7_1:5874189-5874208 | None:intergenic | 35.0% |
| TTGTGTTCTTCATCTTCAAG+AGG | + | chr7_1:5874251-5874270 | None:intergenic | 35.0% | |
| CACAAGAATGTTGAGATTCA+TGG | - | chr7_1:5874266-5874285 | Msa1006880:CDS | 35.0% | |
| !! | ATGGTTGGTGCTATTGATGT+TGG | + | chr7_1:5873393-5873412 | None:intergenic | 40.0% |
| GTTGAGGTTGTTGATATGGT+TGG | + | chr7_1:5873408-5873427 | None:intergenic | 40.0% | |
| ! | GTTGAGGTTGGGAATTTTGT+GGG | + | chr7_1:5873477-5873496 | None:intergenic | 40.0% |
| ! | TGTTGAGGTTGGGAATTTTG+TGG | + | chr7_1:5873478-5873497 | None:intergenic | 40.0% |
| !!! | TTTTTGGGGTTGTTGAGGTT+GGG | + | chr7_1:5873488-5873507 | None:intergenic | 40.0% |
| !!! | ATTTTTGGGGTTGTTGAGGT+TGG | + | chr7_1:5873489-5873508 | None:intergenic | 40.0% |
| !!! | TGAGATTTTTGGGGTTGTTG+AGG | + | chr7_1:5873493-5873512 | None:intergenic | 40.0% |
| AAAAACCATGCAGCAAACCT+AGG | - | chr7_1:5873621-5873640 | Msa1006880:CDS | 40.0% | |
| GAATTCACCACAACCATCTA+GGG | + | chr7_1:5873655-5873674 | None:intergenic | 40.0% | |
| TGAATTCACCACAACCATCT+AGG | + | chr7_1:5873656-5873675 | None:intergenic | 40.0% | |
| !! | GCAGCACATTTTAAGGATGT+TGG | + | chr7_1:5873708-5873727 | None:intergenic | 40.0% |
| !! | TCCTTAAAATGTGCTGCTTG+TGG | - | chr7_1:5873711-5873730 | Msa1006880:CDS | 40.0% |
| TTCAATGACATGAGTTGTGG+TGG | + | chr7_1:5873784-5873803 | None:intergenic | 40.0% | |
| !! | AATTTGCTGAGAAAGTTGGG+TGG | - | chr7_1:5874057-5874076 | Msa1006880:CDS | 40.0% |
| !! | ATGGTTGGTGCTATTGATGT+TGG | + | chr7_1:5873393-5873412 | None:intergenic | 40.0% |
| GTTGAGGTTGTTGATATGGT+TGG | + | chr7_1:5873408-5873427 | None:intergenic | 40.0% | |
| ! | GTTGAGGTTGGGAATTTTGT+GGG | + | chr7_1:5873477-5873496 | None:intergenic | 40.0% |
| ! | TGTTGAGGTTGGGAATTTTG+TGG | + | chr7_1:5873478-5873497 | None:intergenic | 40.0% |
| !!! | TTTTTGGGGTTGTTGAGGTT+GGG | + | chr7_1:5873488-5873507 | None:intergenic | 40.0% |
| !!! | ATTTTTGGGGTTGTTGAGGT+TGG | + | chr7_1:5873489-5873508 | None:intergenic | 40.0% |
| !!! | TGAGATTTTTGGGGTTGTTG+AGG | + | chr7_1:5873493-5873512 | None:intergenic | 40.0% |
| AAAAACCATGCAGCAAACCT+AGG | - | chr7_1:5873621-5873640 | Msa1006880:CDS | 40.0% | |
| GAATTCACCACAACCATCTA+GGG | + | chr7_1:5873655-5873674 | None:intergenic | 40.0% | |
| TGAATTCACCACAACCATCT+AGG | + | chr7_1:5873656-5873675 | None:intergenic | 40.0% | |
| !! | GCAGCACATTTTAAGGATGT+TGG | + | chr7_1:5873708-5873727 | None:intergenic | 40.0% |
| !! | TCCTTAAAATGTGCTGCTTG+TGG | - | chr7_1:5873711-5873730 | Msa1006880:CDS | 40.0% |
| TTCAATGACATGAGTTGTGG+TGG | + | chr7_1:5873784-5873803 | None:intergenic | 40.0% | |
| !! | AATTTGCTGAGAAAGTTGGG+TGG | - | chr7_1:5874057-5874076 | Msa1006880:CDS | 40.0% |
| !! | ATTGATGTTGGTGGTGGTGT+TGG | + | chr7_1:5873381-5873400 | None:intergenic | 45.0% |
| !! | GTTGGTGCTATTGATGTTGG+TGG | + | chr7_1:5873390-5873409 | None:intergenic | 45.0% |
| TGTTGTTGTGGTGGTTGAAG+TGG | + | chr7_1:5873560-5873579 | None:intergenic | 45.0% | |
| !! | GATGGTTGTTGGTGTTGTTG+TGG | + | chr7_1:5873572-5873591 | None:intergenic | 45.0% |
| !! | TATGGTGGGTTGATGGTTGT+TGG | + | chr7_1:5873583-5873602 | None:intergenic | 45.0% |
| !! | TGTAGGTTATGGTGGGTTGA+TGG | + | chr7_1:5873590-5873609 | None:intergenic | 45.0% |
| TTTAAGGATGTTGGGTCGGT+TGG | + | chr7_1:5873699-5873718 | None:intergenic | 45.0% | |
| ! | GCCACAAGCAGCACATTTTA+AGG | + | chr7_1:5873715-5873734 | None:intergenic | 45.0% |
| ! | ACATGAGTTGTGGTGGAAAG+TGG | + | chr7_1:5873777-5873796 | None:intergenic | 45.0% |
| ! | AGAGAGCAAGAAGCATGTGA+GGG | + | chr7_1:5873914-5873933 | None:intergenic | 45.0% |
| !! | TTTGGAGCTGCAACGTTTTC+CGG | + | chr7_1:5873948-5873967 | None:intergenic | 45.0% |
| CAGAATGAAGGTGGAGTTGT+TGG | - | chr7_1:5874308-5874327 | Msa1006880:CDS | 45.0% | |
| GGAGTAACTGTTCGTGCTAA+TGG | - | chr7_1:5874329-5874348 | Msa1006880:CDS | 45.0% | |
| !! | ATTGATGTTGGTGGTGGTGT+TGG | + | chr7_1:5873381-5873400 | None:intergenic | 45.0% |
| !! | GTTGGTGCTATTGATGTTGG+TGG | + | chr7_1:5873390-5873409 | None:intergenic | 45.0% |
| TGTTGTTGTGGTGGTTGAAG+TGG | + | chr7_1:5873560-5873579 | None:intergenic | 45.0% | |
| !! | GATGGTTGTTGGTGTTGTTG+TGG | + | chr7_1:5873572-5873591 | None:intergenic | 45.0% |
| !! | TATGGTGGGTTGATGGTTGT+TGG | + | chr7_1:5873583-5873602 | None:intergenic | 45.0% |
| !! | TGTAGGTTATGGTGGGTTGA+TGG | + | chr7_1:5873590-5873609 | None:intergenic | 45.0% |
| TTTAAGGATGTTGGGTCGGT+TGG | + | chr7_1:5873699-5873718 | None:intergenic | 45.0% | |
| ! | GCCACAAGCAGCACATTTTA+AGG | + | chr7_1:5873715-5873734 | None:intergenic | 45.0% |
| ! | ACATGAGTTGTGGTGGAAAG+TGG | + | chr7_1:5873777-5873796 | None:intergenic | 45.0% |
| ! | AGAGAGCAAGAAGCATGTGA+GGG | + | chr7_1:5873914-5873933 | None:intergenic | 45.0% |
| !! | TTTGGAGCTGCAACGTTTTC+CGG | + | chr7_1:5873948-5873967 | None:intergenic | 45.0% |
| CAGAATGAAGGTGGAGTTGT+TGG | - | chr7_1:5874308-5874327 | Msa1006880:CDS | 45.0% | |
| GGAGTAACTGTTCGTGCTAA+TGG | - | chr7_1:5874329-5874348 | Msa1006880:CDS | 45.0% | |
| ! | TGGTGTTGGAGTTGGGGTTA+AGG | + | chr7_1:5873361-5873380 | None:intergenic | 50.0% |
| !! | TGGTGTTGGTGTTGGAGTTG+GGG | + | chr7_1:5873367-5873386 | None:intergenic | 50.0% |
| !! | GTGGTGTTGGTGTTGGAGTT+GGG | + | chr7_1:5873368-5873387 | None:intergenic | 50.0% |
| !! | GGTGCTATTGATGTTGGTGG+TGG | + | chr7_1:5873387-5873406 | None:intergenic | 50.0% |
| TGTTGTGGTGGTTGAAGTGG+TGG | + | chr7_1:5873557-5873576 | None:intergenic | 50.0% | |
| !! | GGTTGTTGGTGTTGTTGTGG+TGG | + | chr7_1:5873569-5873588 | None:intergenic | 50.0% |
| AACCATGCAGCAAACCTAGG+TGG | - | chr7_1:5873624-5873643 | Msa1006880:CDS | 50.0% | |
| ! | GTGGTGGTTCTTCAGGTTCA+CGG | + | chr7_1:5873758-5873777 | None:intergenic | 50.0% |
| GTGGAAAGTGGTGGTTCTTC+AGG | + | chr7_1:5873765-5873784 | None:intergenic | 50.0% | |
| ! | TGAGTTGTGGTGGAAAGTGG+TGG | + | chr7_1:5873774-5873793 | None:intergenic | 50.0% |
| !! | GTGGTGGAAGTGGTTGATGA+CGG | + | chr7_1:5873821-5873840 | None:intergenic | 50.0% |
| ! | GTGGTGGTGAGGAGGAATTT+GGG | + | chr7_1:5873863-5873882 | None:intergenic | 50.0% |
| TAGTAAGAGGAGGAGATCGG+TGG | + | chr7_1:5873882-5873901 | None:intergenic | 50.0% | |
| GGGTAGTAAGAGGAGGAGAT+CGG | + | chr7_1:5873885-5873904 | None:intergenic | 50.0% | |
| ! | GAGAGCAAGAAGCATGTGAG+GGG | + | chr7_1:5873913-5873932 | None:intergenic | 50.0% |
| ! | GAGAGAGCAAGAAGCATGTG+AGG | + | chr7_1:5873915-5873934 | None:intergenic | 50.0% |
| ! | TGCAACGTTTTCCGGTAAGG+CGG | + | chr7_1:5873940-5873959 | None:intergenic | 50.0% |
| ! | AGCTGCAACGTTTTCCGGTA+AGG | + | chr7_1:5873943-5873962 | None:intergenic | 50.0% |
| ! | TGGTGTTGGAGTTGGGGTTA+AGG | + | chr7_1:5873361-5873380 | None:intergenic | 50.0% |
| !! | TGGTGTTGGTGTTGGAGTTG+GGG | + | chr7_1:5873367-5873386 | None:intergenic | 50.0% |
| !! | GTGGTGTTGGTGTTGGAGTT+GGG | + | chr7_1:5873368-5873387 | None:intergenic | 50.0% |
| !! | GGTGCTATTGATGTTGGTGG+TGG | + | chr7_1:5873387-5873406 | None:intergenic | 50.0% |
| TGTTGTGGTGGTTGAAGTGG+TGG | + | chr7_1:5873557-5873576 | None:intergenic | 50.0% | |
| !! | GGTTGTTGGTGTTGTTGTGG+TGG | + | chr7_1:5873569-5873588 | None:intergenic | 50.0% |
| AACCATGCAGCAAACCTAGG+TGG | - | chr7_1:5873624-5873643 | Msa1006880:CDS | 50.0% | |
| ! | GTGGTGGTTCTTCAGGTTCA+CGG | + | chr7_1:5873758-5873777 | None:intergenic | 50.0% |
| GTGGAAAGTGGTGGTTCTTC+AGG | + | chr7_1:5873765-5873784 | None:intergenic | 50.0% | |
| ! | TGAGTTGTGGTGGAAAGTGG+TGG | + | chr7_1:5873774-5873793 | None:intergenic | 50.0% |
| !! | GTGGTGGAAGTGGTTGATGA+CGG | + | chr7_1:5873821-5873840 | None:intergenic | 50.0% |
| ! | GTGGTGGTGAGGAGGAATTT+GGG | + | chr7_1:5873863-5873882 | None:intergenic | 50.0% |
| TAGTAAGAGGAGGAGATCGG+TGG | + | chr7_1:5873882-5873901 | None:intergenic | 50.0% | |
| GGGTAGTAAGAGGAGGAGAT+CGG | + | chr7_1:5873885-5873904 | None:intergenic | 50.0% | |
| ! | GAGAGCAAGAAGCATGTGAG+GGG | + | chr7_1:5873913-5873932 | None:intergenic | 50.0% |
| ! | GAGAGAGCAAGAAGCATGTG+AGG | + | chr7_1:5873915-5873934 | None:intergenic | 50.0% |
| ! | TGCAACGTTTTCCGGTAAGG+CGG | + | chr7_1:5873940-5873959 | None:intergenic | 50.0% |
| ! | AGCTGCAACGTTTTCCGGTA+AGG | + | chr7_1:5873943-5873962 | None:intergenic | 50.0% |
| !! | GGTGGTGTTGGTGTTGGAGT+TGG | + | chr7_1:5873369-5873388 | None:intergenic | 55.0% |
| !! | GTTGGTGGTGGTGTTGGTGT+TGG | + | chr7_1:5873375-5873394 | None:intergenic | 55.0% |
| TGTGGTGGTTGAAGTGGTGG+TGG | + | chr7_1:5873554-5873573 | None:intergenic | 55.0% | |
| !! | GACCACCTAGGTTTGCTGCA+TGG | + | chr7_1:5873629-5873648 | None:intergenic | 55.0% |
| ! | CATCTAGGGCATGACCACCT+AGG | + | chr7_1:5873641-5873660 | None:intergenic | 55.0% |
| CTAGGTGGTCATGCCCTAGA+TGG | - | chr7_1:5873639-5873658 | Msa1006880:CDS | 55.0% | |
| GGTCATGCCCTAGATGGTTG+TGG | - | chr7_1:5873645-5873664 | Msa1006880:CDS | 55.0% | |
| GTTCACGGCGGTGGAAGTTA+CGG | + | chr7_1:5873743-5873762 | None:intergenic | 55.0% | |
| ! | GTGGTTCTTCAGGTTCACGG+CGG | + | chr7_1:5873755-5873774 | None:intergenic | 55.0% |
| !! | AGTGGTTGATGACGGTGGTG+AGG | + | chr7_1:5873813-5873832 | None:intergenic | 55.0% |
| !! | GTGGAAGTGGTTGATGACGG+TGG | + | chr7_1:5873818-5873837 | None:intergenic | 55.0% |
| !! | GAAAAGGGTGGTGGTGGAAG+TGG | + | chr7_1:5873831-5873850 | None:intergenic | 55.0% |
| TTTGGGCTCCGGTGGGAAAA+GGG | + | chr7_1:5873846-5873865 | None:intergenic | 55.0% | |
| ATTTGGGCTCCGGTGGGAAA+AGG | + | chr7_1:5873847-5873866 | None:intergenic | 55.0% | |
| GTGAGGAGGAATTTGGGCTC+CGG | + | chr7_1:5873857-5873876 | None:intergenic | 55.0% | |
| ! | GGTGGTGGTGAGGAGGAATT+TGG | + | chr7_1:5873864-5873883 | None:intergenic | 55.0% |
| TAAGAGGAGGAGATCGGTGG+TGG | + | chr7_1:5873879-5873898 | None:intergenic | 55.0% | |
| ! | AGCAAGAAGCATGTGAGGGG+CGG | + | chr7_1:5873910-5873929 | None:intergenic | 55.0% |
| ! | AACGTTTTCCGGTAAGGCGG+CGG | + | chr7_1:5873937-5873956 | None:intergenic | 55.0% |
| !! | GGTGGTGTTGGTGTTGGAGT+TGG | + | chr7_1:5873369-5873388 | None:intergenic | 55.0% |
| !! | GTTGGTGGTGGTGTTGGTGT+TGG | + | chr7_1:5873375-5873394 | None:intergenic | 55.0% |
| TGTGGTGGTTGAAGTGGTGG+TGG | + | chr7_1:5873554-5873573 | None:intergenic | 55.0% | |
| !! | GACCACCTAGGTTTGCTGCA+TGG | + | chr7_1:5873629-5873648 | None:intergenic | 55.0% |
| ! | CATCTAGGGCATGACCACCT+AGG | + | chr7_1:5873641-5873660 | None:intergenic | 55.0% |
| CTAGGTGGTCATGCCCTAGA+TGG | - | chr7_1:5873639-5873658 | Msa1006880:CDS | 55.0% | |
| GGTCATGCCCTAGATGGTTG+TGG | - | chr7_1:5873645-5873664 | Msa1006880:CDS | 55.0% | |
| GTTCACGGCGGTGGAAGTTA+CGG | + | chr7_1:5873743-5873762 | None:intergenic | 55.0% | |
| ! | GTGGTTCTTCAGGTTCACGG+CGG | + | chr7_1:5873755-5873774 | None:intergenic | 55.0% |
| !! | AGTGGTTGATGACGGTGGTG+AGG | + | chr7_1:5873813-5873832 | None:intergenic | 55.0% |
| !! | GTGGAAGTGGTTGATGACGG+TGG | + | chr7_1:5873818-5873837 | None:intergenic | 55.0% |
| !! | GAAAAGGGTGGTGGTGGAAG+TGG | + | chr7_1:5873831-5873850 | None:intergenic | 55.0% |
| TTTGGGCTCCGGTGGGAAAA+GGG | + | chr7_1:5873846-5873865 | None:intergenic | 55.0% | |
| ATTTGGGCTCCGGTGGGAAA+AGG | + | chr7_1:5873847-5873866 | None:intergenic | 55.0% | |
| GTGAGGAGGAATTTGGGCTC+CGG | + | chr7_1:5873857-5873876 | None:intergenic | 55.0% | |
| ! | GGTGGTGGTGAGGAGGAATT+TGG | + | chr7_1:5873864-5873883 | None:intergenic | 55.0% |
| TAAGAGGAGGAGATCGGTGG+TGG | + | chr7_1:5873879-5873898 | None:intergenic | 55.0% | |
| ! | AGCAAGAAGCATGTGAGGGG+CGG | + | chr7_1:5873910-5873929 | None:intergenic | 55.0% |
| ! | AACGTTTTCCGGTAAGGCGG+CGG | + | chr7_1:5873937-5873956 | None:intergenic | 55.0% |
| !! | TGAAGTGGTGGTGGTGGTGG+TGG | + | chr7_1:5873545-5873564 | None:intergenic | 60.0% |
| !! | GGTTGAAGTGGTGGTGGTGG+TGG | + | chr7_1:5873548-5873567 | None:intergenic | 60.0% |
| !! | GGTGGTTGAAGTGGTGGTGG+TGG | + | chr7_1:5873551-5873570 | None:intergenic | 60.0% |
| !! | GGGTCGGTTGGTGTTGCTGT+GGG | + | chr7_1:5873687-5873706 | None:intergenic | 60.0% |
| !! | TGGGTCGGTTGGTGTTGCTG+TGG | + | chr7_1:5873688-5873707 | None:intergenic | 60.0% |
| ! | GTTCTTCAGGTTCACGGCGG+TGG | + | chr7_1:5873752-5873771 | None:intergenic | 60.0% |
| ! | CACCACCACCCTTTTCCCAC+CGG | - | chr7_1:5873835-5873854 | Msa1006880:CDS | 60.0% |
| GGAGGAATTTGGGCTCCGGT+GGG | + | chr7_1:5873853-5873872 | None:intergenic | 60.0% | |
| AGGAGGAATTTGGGCTCCGG+TGG | + | chr7_1:5873854-5873873 | None:intergenic | 60.0% | |
| ! | AGAAGCATGTGAGGGGCGGA+GGG | + | chr7_1:5873906-5873925 | None:intergenic | 60.0% |
| ! | AAGAAGCATGTGAGGGGCGG+AGG | + | chr7_1:5873907-5873926 | None:intergenic | 60.0% |
| !! | TGAAGTGGTGGTGGTGGTGG+TGG | + | chr7_1:5873545-5873564 | None:intergenic | 60.0% |
| !! | GGTTGAAGTGGTGGTGGTGG+TGG | + | chr7_1:5873548-5873567 | None:intergenic | 60.0% |
| !! | GGTGGTTGAAGTGGTGGTGG+TGG | + | chr7_1:5873551-5873570 | None:intergenic | 60.0% |
| !! | GGGTCGGTTGGTGTTGCTGT+GGG | + | chr7_1:5873687-5873706 | None:intergenic | 60.0% |
| !! | TGGGTCGGTTGGTGTTGCTG+TGG | + | chr7_1:5873688-5873707 | None:intergenic | 60.0% |
| ! | GTTCTTCAGGTTCACGGCGG+TGG | + | chr7_1:5873752-5873771 | None:intergenic | 60.0% |
| ! | CACCACCACCCTTTTCCCAC+CGG | - | chr7_1:5873835-5873854 | Msa1006880:CDS | 60.0% |
| GGAGGAATTTGGGCTCCGGT+GGG | + | chr7_1:5873853-5873872 | None:intergenic | 60.0% | |
| AGGAGGAATTTGGGCTCCGG+TGG | + | chr7_1:5873854-5873873 | None:intergenic | 60.0% | |
| ! | AGAAGCATGTGAGGGGCGGA+GGG | + | chr7_1:5873906-5873925 | None:intergenic | 60.0% |
| ! | AAGAAGCATGTGAGGGGCGG+AGG | + | chr7_1:5873907-5873926 | None:intergenic | 60.0% |
| CACGGCGGTGGAAGTTACGG+TGG | + | chr7_1:5873740-5873759 | None:intergenic | 65.0% | |
| ! | CGGTGGGAAAAGGGTGGTGG+TGG | + | chr7_1:5873837-5873856 | None:intergenic | 65.0% |
| CTCCGGTGGGAAAAGGGTGG+TGG | + | chr7_1:5873840-5873859 | None:intergenic | 65.0% | |
| ! | GGAGATCGGTGGTGGTGAGG+AGG | + | chr7_1:5873871-5873890 | None:intergenic | 65.0% |
| ! | GGAGGAGATCGGTGGTGGTG+AGG | + | chr7_1:5873874-5873893 | None:intergenic | 65.0% |
| GGCGGAGGGGTAGTAAGAGG+AGG | + | chr7_1:5873892-5873911 | None:intergenic | 65.0% | |
| AGGGGCGGAGGGGTAGTAAG+AGG | + | chr7_1:5873895-5873914 | None:intergenic | 65.0% | |
| GAAGCATGTGAGGGGCGGAG+GGG | + | chr7_1:5873905-5873924 | None:intergenic | 65.0% | |
| TGCTCTCTCCGCCGCCTTAC+CGG | - | chr7_1:5873926-5873945 | Msa1006880:CDS | 65.0% | |
| CACGGCGGTGGAAGTTACGG+TGG | + | chr7_1:5873740-5873759 | None:intergenic | 65.0% | |
| ! | CGGTGGGAAAAGGGTGGTGG+TGG | + | chr7_1:5873837-5873856 | None:intergenic | 65.0% |
| CTCCGGTGGGAAAAGGGTGG+TGG | + | chr7_1:5873840-5873859 | None:intergenic | 65.0% | |
| ! | GGAGATCGGTGGTGGTGAGG+AGG | + | chr7_1:5873871-5873890 | None:intergenic | 65.0% |
| ! | GGAGGAGATCGGTGGTGGTG+AGG | + | chr7_1:5873874-5873893 | None:intergenic | 65.0% |
| GGCGGAGGGGTAGTAAGAGG+AGG | + | chr7_1:5873892-5873911 | None:intergenic | 65.0% | |
| AGGGGCGGAGGGGTAGTAAG+AGG | + | chr7_1:5873895-5873914 | None:intergenic | 65.0% | |
| GAAGCATGTGAGGGGCGGAG+GGG | + | chr7_1:5873905-5873924 | None:intergenic | 65.0% | |
| TGCTCTCTCCGCCGCCTTAC+CGG | - | chr7_1:5873926-5873945 | Msa1006880:CDS | 65.0% | |
| GGGCTCCGGTGGGAAAAGGG+TGG | + | chr7_1:5873843-5873862 | None:intergenic | 70.0% | |
| GGGCTCCGGTGGGAAAAGGG+TGG | + | chr7_1:5873843-5873862 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 5873348 | 5874370 | 5873348 | ID=Msa1006880;Name=Msa1006880 |
| chr7_1 | mRNA | 5873348 | 5874370 | 5873348 | ID=Msa1006880-mRNA-1;Parent=Msa1006880;Name=Msa1006880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|340 |
| chr7_1 | exon | 5873348 | 5874370 | 5873348 | ID=Msa1006880-mRNA-1:exon:1846;Parent=Msa1006880-mRNA-1 |
| chr7_1 | CDS | 5873348 | 5874370 | 5873348 | ID=Msa1006880-mRNA-1:cds;Parent=Msa1006880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
