Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099670 | XP_003588912.1 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099670 | sp|Q9CAJ0|P2C16_ARATH | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.35e-162 | 474 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099670 | G7I8Z3 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0031220 | Msa0099670 | 0.806578 | 7.686367e-50 | -8.615850e-47 |
Msa0053830 | Msa0099670 | 0.988423 | 5.835076e-174 | -8.615850e-47 |
Msa0099660 | Msa0099670 | 0.992952 | 1.717585e-196 | -8.615850e-47 |
Msa0099670 | Msa0137200 | 0.822209 | 2.677604e-53 | -8.615850e-47 |
Msa0099670 | Msa0182380 | 0.818590 | 1.810295e-52 | -8.615850e-47 |
Msa0099670 | Msa0384080 | 0.800353 | 1.499531e-48 | -8.615850e-47 |
Msa0099670 | Msa0509020 | 0.803613 | 3.207326e-49 | -8.615850e-47 |
Msa0099670 | Msa0522460 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
Msa0099670 | Msa1008090 | 0.804868 | 1.756632e-49 | -8.615850e-47 |
Msa0099670 | Msa1404500 | 0.824174 | 9.313854e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099670 | MtrunA17_Chr1g0150781 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Msa0099670 | MtrunA17_Chr3g0135961 | 67.029 | 552 | 168 | 4 | 8 | 553 | 6 | 549 | 0.0 | 718 |
Msa0099670 | MtrunA17_Chr2g0299981 | 44.692 | 584 | 253 | 12 | 1 | 553 | 1 | 545 | 5.87e-154 | 451 |
Msa0099670 | MtrunA17_Chr4g0070871 | 46.071 | 560 | 248 | 12 | 1 | 553 | 1 | 513 | 3.54e-148 | 436 |
Msa0099670 | MtrunA17_Chr8g0389921 | 51.456 | 309 | 132 | 7 | 240 | 548 | 149 | 439 | 1.38e-88 | 280 |
Msa0099670 | MtrunA17_Chr3g0112291 | 43.452 | 336 | 138 | 8 | 232 | 551 | 85 | 384 | 3.48e-78 | 251 |
Msa0099670 | MtrunA17_Chr5g0396731 | 42.133 | 375 | 182 | 9 | 175 | 543 | 5 | 350 | 6.62e-76 | 244 |
Msa0099670 | MtrunA17_Chr1g0158781 | 48.734 | 316 | 120 | 8 | 232 | 544 | 104 | 380 | 4.11e-74 | 240 |
Msa0099670 | MtrunA17_Chr5g0435721 | 43.871 | 310 | 121 | 6 | 237 | 530 | 190 | 462 | 9.36e-69 | 229 |
Msa0099670 | MtrunA17_Chr1g0150451 | 36.424 | 302 | 134 | 7 | 240 | 541 | 78 | 321 | 2.04e-47 | 168 |
Msa0099670 | MtrunA17_Chr3g0136711 | 36.755 | 302 | 133 | 7 | 240 | 541 | 35 | 278 | 5.55e-47 | 166 |
Msa0099670 | MtrunA17_Chr3g0126511 | 35.806 | 310 | 139 | 8 | 241 | 549 | 96 | 346 | 1.38e-42 | 156 |
Msa0099670 | MtrunA17_Chr1g0212961 | 33.974 | 312 | 134 | 8 | 240 | 546 | 96 | 340 | 2.48e-42 | 155 |
Msa0099670 | MtrunA17_Chr3g0105351 | 33.984 | 256 | 134 | 5 | 290 | 544 | 94 | 315 | 1.24e-36 | 138 |
Msa0099670 | MtrunA17_Chr3g0105371 | 35.156 | 256 | 131 | 6 | 290 | 544 | 118 | 339 | 3.43e-36 | 138 |
Msa0099670 | MtrunA17_Chr5g0430481 | 33.333 | 273 | 146 | 6 | 273 | 544 | 138 | 375 | 3.18e-35 | 136 |
Msa0099670 | MtrunA17_Chr4g0050381 | 34.815 | 270 | 122 | 9 | 283 | 544 | 54 | 277 | 1.86e-32 | 125 |
Msa0099670 | MtrunA17_Chr1g0171571 | 31.013 | 316 | 161 | 9 | 236 | 545 | 382 | 646 | 1.11e-31 | 129 |
Msa0099670 | MtrunA17_Chr1g0194191 | 32.394 | 284 | 146 | 10 | 285 | 550 | 113 | 368 | 2.91e-31 | 125 |
Msa0099670 | MtrunA17_Chr5g0407161 | 31.179 | 263 | 137 | 7 | 285 | 541 | 119 | 343 | 4.27e-30 | 121 |
Msa0099670 | MtrunA17_Chr2g0293811 | 30.566 | 265 | 150 | 5 | 285 | 543 | 95 | 331 | 1.67e-29 | 119 |
Msa0099670 | MtrunA17_Chr4g0065141 | 29.885 | 261 | 138 | 6 | 290 | 541 | 124 | 348 | 7.20e-29 | 118 |
Msa0099670 | MtrunA17_Chr3g0144111 | 32.061 | 262 | 113 | 8 | 290 | 545 | 27 | 229 | 1.04e-28 | 115 |
Msa0099670 | MtrunA17_Chr3g0138281 | 29.321 | 324 | 172 | 11 | 232 | 546 | 73 | 348 | 1.83e-28 | 117 |
Msa0099670 | MtrunA17_Chr3g0115851 | 32.946 | 258 | 129 | 7 | 290 | 544 | 66 | 282 | 3.77e-28 | 114 |
Msa0099670 | MtrunA17_Chr5g0426141 | 34.749 | 259 | 123 | 8 | 290 | 544 | 66 | 282 | 1.99e-27 | 112 |
Msa0099670 | MtrunA17_Chr3g0136811 | 28.188 | 298 | 140 | 5 | 240 | 493 | 24 | 291 | 1.61e-26 | 111 |
Msa0099670 | MtrunA17_Chr2g0279151 | 32.593 | 270 | 128 | 8 | 283 | 544 | 58 | 281 | 4.35e-26 | 108 |
Msa0099670 | MtrunA17_Chr4g0001761 | 30.537 | 298 | 133 | 10 | 240 | 493 | 24 | 291 | 9.05e-26 | 108 |
Msa0099670 | MtrunA17_Chr2g0317021 | 31.429 | 315 | 137 | 10 | 241 | 544 | 87 | 333 | 2.13e-25 | 107 |
Msa0099670 | MtrunA17_Chr1g0150071 | 28.526 | 312 | 131 | 10 | 240 | 498 | 24 | 296 | 3.10e-25 | 107 |
Msa0099670 | MtrunA17_Chr8g0360351 | 34.510 | 255 | 123 | 8 | 290 | 541 | 66 | 279 | 3.89e-25 | 105 |
Msa0099670 | MtrunA17_Chr4g0051661 | 32.157 | 255 | 128 | 6 | 290 | 541 | 183 | 395 | 6.07e-25 | 107 |
Msa0099670 | MtrunA17_Chr1g0185141 | 33.913 | 230 | 97 | 7 | 368 | 551 | 226 | 446 | 1.64e-24 | 108 |
Msa0099670 | MtrunA17_Chr3g0127091 | 25.507 | 345 | 160 | 12 | 240 | 543 | 61 | 349 | 2.97e-22 | 99.0 |
Msa0099670 | MtrunA17_Chr4g0066371 | 25.915 | 328 | 162 | 12 | 263 | 544 | 49 | 341 | 2.28e-21 | 96.7 |
Msa0099670 | MtrunA17_Chr6g0483411 | 28.417 | 278 | 137 | 11 | 291 | 544 | 80 | 319 | 1.46e-20 | 92.8 |
Msa0099670 | MtrunA17_Chr7g0243571 | 31.489 | 235 | 122 | 8 | 290 | 488 | 92 | 323 | 1.02e-19 | 92.0 |
Msa0099670 | MtrunA17_Chr3g0133801 | 30.935 | 278 | 128 | 11 | 291 | 548 | 67 | 300 | 2.57e-19 | 90.5 |
Msa0099670 | MtrunA17_Chr4g0067711 | 33.766 | 231 | 121 | 9 | 290 | 491 | 91 | 318 | 4.19e-19 | 89.4 |
Msa0099670 | MtrunA17_Chr2g0286951 | 26.282 | 312 | 153 | 11 | 276 | 544 | 65 | 342 | 4.58e-19 | 89.7 |
Msa0099670 | MtrunA17_Chr1g0192421 | 33.032 | 221 | 126 | 8 | 290 | 488 | 89 | 309 | 9.71e-19 | 87.8 |
Msa0099670 | MtrunA17_Chr1g0209451 | 30.035 | 283 | 147 | 10 | 274 | 545 | 57 | 299 | 7.80e-18 | 86.3 |
Msa0099670 | MtrunA17_Chr1g0213351 | 29.153 | 295 | 148 | 11 | 290 | 543 | 80 | 354 | 1.14e-17 | 85.1 |
Msa0099670 | MtrunA17_Chr4g0004971 | 28.881 | 277 | 144 | 9 | 288 | 535 | 76 | 328 | 1.23e-17 | 84.7 |
Msa0099670 | MtrunA17_Chr1g0151781 | 29.515 | 227 | 125 | 8 | 290 | 488 | 68 | 287 | 3.37e-17 | 83.2 |
Msa0099670 | MtrunA17_Chr7g0221691 | 30.165 | 242 | 128 | 8 | 288 | 488 | 127 | 368 | 4.26e-17 | 84.0 |
Msa0099670 | MtrunA17_Chr1g0153671 | 29.197 | 274 | 138 | 10 | 291 | 548 | 66 | 299 | 5.68e-17 | 83.6 |
Msa0099670 | MtrunA17_Chr6g0486661 | 23.188 | 345 | 186 | 13 | 186 | 491 | 41 | 345 | 1.49e-16 | 83.6 |
Msa0099670 | MtrunA17_Chr2g0295401 | 30.137 | 219 | 121 | 8 | 292 | 483 | 94 | 307 | 3.43e-16 | 80.5 |
Msa0099670 | MtrunA17_Chr1g0207571 | 30.303 | 297 | 144 | 15 | 290 | 543 | 61 | 337 | 4.25e-16 | 80.5 |
Msa0099670 | MtrunA17_Chr2g0324061 | 28.814 | 236 | 128 | 7 | 290 | 488 | 90 | 322 | 1.25e-15 | 79.7 |
Msa0099670 | MtrunA17_Chr7g0272061 | 30.043 | 233 | 126 | 8 | 290 | 488 | 91 | 320 | 1.40e-15 | 78.6 |
Msa0099670 | MtrunA17_Chr7g0225501 | 30.882 | 204 | 120 | 8 | 291 | 483 | 87 | 280 | 1.56e-15 | 79.0 |
Msa0099670 | MtrunA17_Chr7g0271971 | 29.520 | 271 | 135 | 10 | 291 | 545 | 69 | 299 | 1.87e-15 | 78.6 |
Msa0099670 | MtrunA17_Chr7g0249421 | 29.119 | 261 | 129 | 9 | 280 | 488 | 87 | 343 | 2.37e-15 | 79.0 |
Msa0099670 | MtrunA17_Chr4g0022171 | 27.869 | 244 | 135 | 6 | 283 | 488 | 89 | 329 | 2.89e-15 | 78.6 |
Msa0099670 | MtrunA17_Chr1g0192471 | 30.712 | 267 | 137 | 10 | 291 | 545 | 69 | 299 | 4.57e-15 | 77.4 |
Msa0099670 | MtrunA17_Chr3g0089721 | 27.458 | 295 | 157 | 11 | 290 | 543 | 68 | 346 | 8.29e-15 | 76.3 |
Msa0099670 | MtrunA17_Chr7g0238501 | 25.685 | 292 | 173 | 10 | 290 | 544 | 263 | 547 | 1.69e-14 | 76.3 |
Msa0099670 | MtrunA17_Chr3g0089711 | 27.148 | 291 | 163 | 10 | 290 | 543 | 68 | 346 | 2.61e-14 | 74.7 |
Msa0099670 | MtrunA17_Chr7g0263281 | 29.958 | 237 | 111 | 11 | 285 | 483 | 67 | 286 | 3.53e-14 | 74.3 |
Msa0099670 | MtrunA17_Chr8g0371321 | 26.337 | 243 | 117 | 6 | 290 | 490 | 79 | 301 | 9.99e-14 | 73.2 |
Msa0099670 | MtrunA17_Chr1g0181901 | 28.452 | 239 | 122 | 10 | 285 | 488 | 72 | 296 | 1.16e-13 | 73.2 |
Msa0099670 | MtrunA17_Chr4g0063111 | 30.435 | 230 | 115 | 9 | 290 | 488 | 74 | 289 | 3.15e-13 | 72.4 |
Msa0099670 | MtrunA17_Chr1g0211251 | 26.471 | 238 | 123 | 8 | 290 | 490 | 81 | 303 | 5.20e-13 | 70.9 |
Msa0099670 | MtrunA17_Chr7g0256751 | 26.778 | 239 | 121 | 10 | 290 | 490 | 69 | 291 | 1.69e-12 | 69.7 |
Msa0099670 | MtrunA17_Chr2g0294291 | 25.086 | 291 | 166 | 10 | 290 | 543 | 75 | 350 | 3.55e-12 | 68.2 |
Msa0099670 | MtrunA17_Chr1g0175381 | 26.246 | 301 | 164 | 13 | 290 | 551 | 79 | 360 | 9.18e-12 | 67.0 |
Msa0099670 | MtrunA17_Chr4g0068971 | 31.757 | 148 | 75 | 5 | 408 | 549 | 110 | 237 | 1.26e-11 | 65.5 |
Msa0099670 | MtrunA17_Chr3g0089691 | 30.093 | 216 | 107 | 8 | 367 | 543 | 50 | 260 | 5.28e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099670 | AT1G72770.4 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099670 | AT1G72770.1 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099670 | AT1G72770.3 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099670 | AT1G17550.1 | 47.173 | 566 | 231 | 11 | 1 | 553 | 1 | 511 | 5.71e-159 | 463 |
Msa0099670 | AT1G17550.2 | 47.173 | 566 | 231 | 11 | 1 | 553 | 1 | 511 | 5.71e-159 | 463 |
Msa0099670 | AT5G57050.1 | 66.964 | 336 | 94 | 6 | 224 | 553 | 97 | 421 | 3.38e-156 | 453 |
Msa0099670 | AT5G57050.2 | 66.964 | 336 | 94 | 6 | 224 | 553 | 57 | 381 | 3.63e-156 | 451 |
Msa0099670 | AT4G26080.1 | 65.476 | 336 | 92 | 6 | 224 | 552 | 113 | 431 | 7.22e-149 | 435 |
Msa0099670 | AT1G72770.2 | 51.534 | 326 | 129 | 5 | 131 | 443 | 92 | 401 | 9.56e-98 | 303 |
Msa0099670 | AT1G72770.5 | 51.534 | 326 | 129 | 5 | 131 | 443 | 92 | 401 | 9.56e-98 | 303 |
Msa0099670 | AT5G57050.3 | 62.667 | 225 | 71 | 5 | 224 | 447 | 97 | 309 | 1.21e-91 | 284 |
Msa0099670 | AT1G07430.1 | 41.667 | 360 | 139 | 7 | 229 | 548 | 110 | 438 | 2.97e-78 | 253 |
Msa0099670 | AT2G29380.1 | 46.082 | 319 | 129 | 9 | 237 | 544 | 75 | 361 | 7.14e-78 | 250 |
Msa0099670 | AT3G11410.1 | 44.231 | 312 | 120 | 7 | 197 | 490 | 68 | 343 | 6.94e-72 | 235 |
Msa0099670 | AT5G51760.2 | 41.641 | 329 | 157 | 5 | 233 | 544 | 72 | 382 | 7.12e-68 | 224 |
Msa0099670 | AT5G51760.1 | 41.641 | 329 | 157 | 5 | 233 | 544 | 102 | 412 | 1.54e-67 | 224 |
Msa0099670 | AT5G59220.1 | 43.161 | 329 | 140 | 8 | 189 | 501 | 55 | 352 | 1.08e-66 | 222 |
Msa0099670 | AT5G59220.2 | 40.959 | 271 | 115 | 7 | 189 | 443 | 55 | 296 | 7.71e-47 | 166 |
Msa0099670 | AT5G24940.1 | 35.974 | 303 | 134 | 9 | 240 | 541 | 34 | 277 | 3.67e-45 | 166 |
Msa0099670 | AT5G10740.1 | 35.430 | 302 | 137 | 7 | 240 | 541 | 34 | 277 | 7.16e-45 | 162 |
Msa0099670 | AT5G10740.2 | 35.430 | 302 | 137 | 7 | 240 | 541 | 34 | 277 | 7.16e-45 | 162 |
Msa0099670 | AT4G31750.2 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.23e-45 | 161 |
Msa0099670 | AT4G31750.1 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.77e-45 | 161 |
Msa0099670 | AT4G31750.3 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.77e-45 | 161 |
Msa0099670 | AT5G53140.1 | 36.066 | 305 | 135 | 9 | 241 | 544 | 103 | 348 | 8.12e-45 | 164 |
Msa0099670 | AT5G53140.2 | 36.066 | 305 | 135 | 9 | 241 | 544 | 103 | 348 | 8.12e-45 | 164 |
Msa0099670 | AT1G43900.1 | 34.628 | 309 | 135 | 9 | 240 | 544 | 124 | 369 | 3.18e-41 | 153 |
Msa0099670 | AT1G67820.2 | 32.222 | 360 | 148 | 11 | 240 | 543 | 85 | 404 | 1.71e-39 | 149 |
Msa0099670 | AT1G67820.1 | 32.222 | 360 | 148 | 11 | 240 | 543 | 121 | 440 | 4.53e-39 | 149 |
Msa0099670 | AT2G40180.1 | 37.109 | 256 | 130 | 7 | 290 | 544 | 161 | 386 | 2.10e-37 | 142 |
Msa0099670 | AT1G07160.1 | 33.550 | 307 | 148 | 7 | 241 | 543 | 122 | 376 | 6.14e-35 | 135 |
Msa0099670 | AT2G30020.1 | 34.416 | 308 | 145 | 10 | 241 | 544 | 139 | 393 | 9.34e-35 | 135 |
Msa0099670 | AT2G33700.1 | 33.588 | 262 | 130 | 8 | 290 | 545 | 123 | 346 | 2.87e-32 | 128 |
Msa0099670 | AT3G17250.1 | 31.136 | 273 | 146 | 8 | 290 | 548 | 158 | 402 | 8.34e-32 | 127 |
Msa0099670 | AT2G25620.1 | 30.449 | 312 | 156 | 10 | 247 | 546 | 97 | 359 | 7.00e-31 | 124 |
Msa0099670 | AT2G25620.2 | 30.449 | 312 | 156 | 10 | 247 | 546 | 97 | 359 | 7.00e-31 | 124 |
Msa0099670 | AT3G51470.2 | 31.939 | 263 | 135 | 8 | 290 | 546 | 62 | 286 | 7.14e-31 | 122 |
Msa0099670 | AT2G40860.4 | 30.255 | 314 | 153 | 10 | 241 | 545 | 296 | 552 | 8.62e-31 | 126 |
Msa0099670 | AT3G51470.1 | 31.939 | 263 | 135 | 8 | 290 | 546 | 106 | 330 | 1.14e-30 | 123 |
Msa0099670 | AT1G48040.1 | 32.727 | 275 | 141 | 9 | 290 | 548 | 116 | 362 | 1.16e-30 | 124 |
Msa0099670 | AT2G40860.1 | 29.936 | 314 | 154 | 9 | 241 | 545 | 394 | 650 | 1.77e-30 | 126 |
Msa0099670 | AT3G62260.3 | 31.179 | 263 | 148 | 7 | 285 | 541 | 22 | 257 | 2.69e-29 | 117 |
Msa0099670 | AT1G22280.3 | 32.950 | 261 | 131 | 8 | 290 | 544 | 65 | 287 | 8.62e-29 | 116 |
Msa0099670 | AT3G62260.2 | 31.179 | 263 | 148 | 7 | 285 | 541 | 112 | 347 | 8.77e-29 | 118 |
Msa0099670 | AT3G62260.1 | 31.179 | 263 | 148 | 7 | 285 | 541 | 111 | 346 | 8.89e-29 | 118 |
Msa0099670 | AT2G34740.1 | 34.866 | 261 | 118 | 10 | 290 | 543 | 119 | 334 | 1.38e-28 | 117 |
Msa0099670 | AT1G78200.5 | 33.721 | 258 | 130 | 7 | 290 | 544 | 19 | 238 | 1.74e-27 | 111 |
Msa0099670 | AT1G78200.4 | 33.721 | 258 | 130 | 7 | 290 | 544 | 19 | 238 | 1.74e-27 | 111 |
Msa0099670 | AT1G34750.2 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099670 | AT1G34750.1 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099670 | AT1G34750.3 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099670 | AT1G22280.1 | 32.946 | 258 | 129 | 8 | 290 | 544 | 65 | 281 | 7.92e-27 | 110 |
Msa0099670 | AT1G78200.1 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099670 | AT1G78200.3 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099670 | AT1G78200.2 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099670 | AT2G40860.2 | 29.771 | 262 | 138 | 7 | 241 | 493 | 394 | 618 | 2.07e-26 | 114 |
Msa0099670 | AT2G25070.1 | 31.633 | 294 | 135 | 13 | 240 | 493 | 24 | 291 | 7.17e-26 | 109 |
Msa0099670 | AT2G25070.2 | 31.633 | 294 | 135 | 13 | 240 | 493 | 24 | 291 | 7.17e-26 | 109 |
Msa0099670 | AT2G20630.1 | 32.950 | 261 | 125 | 9 | 290 | 544 | 63 | 279 | 1.52e-25 | 106 |
Msa0099670 | AT2G20630.2 | 33.074 | 257 | 122 | 9 | 290 | 540 | 63 | 275 | 1.05e-24 | 104 |
Msa0099670 | AT4G31860.3 | 29.932 | 294 | 140 | 11 | 240 | 493 | 24 | 291 | 4.03e-24 | 103 |
Msa0099670 | AT4G31860.1 | 29.932 | 294 | 140 | 11 | 240 | 493 | 24 | 291 | 6.94e-24 | 103 |
Msa0099670 | AT3G15260.2 | 31.783 | 258 | 132 | 7 | 290 | 544 | 73 | 289 | 7.46e-24 | 102 |
Msa0099670 | AT3G15260.1 | 31.783 | 258 | 132 | 7 | 290 | 544 | 73 | 289 | 7.46e-24 | 102 |
Msa0099670 | AT3G63340.12 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 1.36e-23 | 105 |
Msa0099670 | AT4G28400.1 | 29.430 | 316 | 157 | 13 | 245 | 543 | 16 | 282 | 2.65e-23 | 100 |
Msa0099670 | AT4G28400.3 | 32.075 | 265 | 120 | 11 | 290 | 543 | 45 | 260 | 2.74e-23 | 99.8 |
Msa0099670 | AT3G63340.11 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 3.95e-23 | 104 |
Msa0099670 | AT3G63340.6 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099670 | AT3G63340.3 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099670 | AT3G63340.10 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099670 | AT3G63340.4 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099670 | AT3G63340.7 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.07e-23 | 104 |
Msa0099670 | AT3G63340.8 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.16e-23 | 104 |
Msa0099670 | AT3G63340.5 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.53e-23 | 104 |
Msa0099670 | AT3G63340.1 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.53e-23 | 104 |
Msa0099670 | AT3G63320.1 | 28.221 | 326 | 146 | 12 | 292 | 544 | 71 | 381 | 1.53e-22 | 100 |
Msa0099670 | AT3G63320.2 | 33.921 | 227 | 87 | 8 | 368 | 544 | 85 | 298 | 3.28e-22 | 99.0 |
Msa0099670 | AT3G06270.1 | 26.460 | 291 | 145 | 7 | 289 | 544 | 87 | 343 | 8.44e-22 | 97.4 |
Msa0099670 | AT1G34750.4 | 33.663 | 202 | 109 | 6 | 290 | 488 | 66 | 245 | 1.40e-21 | 94.7 |
Msa0099670 | AT3G16800.2 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099670 | AT3G16800.1 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099670 | AT3G16800.3 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099670 | AT4G27800.1 | 27.557 | 352 | 166 | 14 | 237 | 551 | 56 | 355 | 1.40e-20 | 94.4 |
Msa0099670 | AT2G34740.3 | 36.318 | 201 | 97 | 9 | 290 | 483 | 115 | 291 | 2.00e-20 | 92.4 |
Msa0099670 | AT2G34740.2 | 36.318 | 201 | 97 | 9 | 290 | 483 | 133 | 309 | 2.00e-20 | 92.8 |
Msa0099670 | AT4G31860.2 | 30.216 | 278 | 128 | 11 | 240 | 477 | 24 | 275 | 3.01e-20 | 91.3 |
Msa0099670 | AT3G16800.4 | 28.676 | 272 | 158 | 9 | 293 | 545 | 1 | 255 | 4.34e-20 | 90.5 |
Msa0099670 | AT3G16800.6 | 28.676 | 272 | 158 | 9 | 293 | 545 | 1 | 255 | 4.34e-20 | 90.5 |
Msa0099670 | AT1G09160.2 | 30.877 | 285 | 144 | 11 | 273 | 545 | 56 | 299 | 1.22e-19 | 92.0 |
Msa0099670 | AT1G09160.1 | 30.877 | 285 | 144 | 11 | 273 | 545 | 56 | 299 | 1.22e-19 | 92.0 |
Msa0099670 | AT4G08260.1 | 31.373 | 255 | 109 | 10 | 291 | 544 | 20 | 209 | 1.34e-19 | 87.8 |
Msa0099670 | AT5G26010.1 | 32.889 | 225 | 114 | 9 | 288 | 488 | 71 | 282 | 1.90e-19 | 90.1 |
Msa0099670 | AT3G63340.2 | 41.333 | 150 | 68 | 6 | 402 | 544 | 343 | 479 | 6.86e-19 | 91.3 |
Msa0099670 | AT5G02760.1 | 30.603 | 232 | 115 | 7 | 290 | 488 | 72 | 290 | 1.33e-18 | 88.2 |
Msa0099670 | AT1G68410.4 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099670 | AT1G68410.3 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099670 | AT1G68410.1 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099670 | AT1G68410.2 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099670 | AT4G28400.2 | 29.150 | 247 | 140 | 9 | 245 | 479 | 16 | 239 | 5.73e-18 | 84.3 |
Msa0099670 | AT4G03415.1 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099670 | AT4G03415.3 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099670 | AT4G03415.2 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099670 | AT1G17545.1 | 37.333 | 150 | 41 | 5 | 262 | 407 | 78 | 178 | 1.51e-17 | 81.3 |
Msa0099670 | AT2G40860.3 | 27.197 | 239 | 128 | 7 | 241 | 470 | 394 | 595 | 1.70e-17 | 86.3 |
Msa0099670 | AT5G01700.1 | 31.674 | 221 | 125 | 8 | 288 | 485 | 27 | 244 | 7.23e-17 | 82.4 |
Msa0099670 | AT1G47380.1 | 28.881 | 277 | 135 | 11 | 291 | 548 | 65 | 298 | 1.57e-16 | 82.4 |
Msa0099670 | AT5G01700.2 | 31.674 | 221 | 125 | 8 | 288 | 485 | 76 | 293 | 1.97e-16 | 81.6 |
Msa0099670 | AT4G38520.2 | 26.804 | 291 | 156 | 11 | 290 | 541 | 81 | 353 | 2.33e-16 | 81.6 |
Msa0099670 | AT4G38520.1 | 26.804 | 291 | 156 | 11 | 290 | 541 | 81 | 353 | 2.33e-16 | 81.6 |
Msa0099670 | AT4G32950.1 | 29.137 | 278 | 144 | 10 | 292 | 547 | 74 | 320 | 2.69e-16 | 80.5 |
Msa0099670 | AT5G27930.1 | 31.556 | 225 | 125 | 8 | 290 | 488 | 92 | 313 | 4.07e-16 | 80.9 |
Msa0099670 | AT5G27930.2 | 31.556 | 225 | 125 | 8 | 290 | 488 | 92 | 313 | 4.07e-16 | 80.9 |
Msa0099670 | AT4G27800.2 | 27.211 | 294 | 143 | 11 | 237 | 493 | 56 | 315 | 5.51e-16 | 79.7 |
Msa0099670 | AT1G16220.1 | 29.084 | 251 | 135 | 11 | 280 | 488 | 86 | 335 | 6.06e-16 | 81.3 |
Msa0099670 | AT4G27800.3 | 27.211 | 294 | 143 | 11 | 237 | 493 | 56 | 315 | 6.72e-16 | 79.3 |
Msa0099670 | AT3G12620.2 | 27.000 | 300 | 157 | 11 | 285 | 543 | 79 | 357 | 7.43e-16 | 80.1 |
Msa0099670 | AT3G12620.1 | 27.000 | 300 | 157 | 11 | 285 | 543 | 79 | 357 | 7.43e-16 | 80.1 |
Msa0099670 | AT1G03590.1 | 29.339 | 242 | 132 | 7 | 283 | 488 | 83 | 321 | 1.55e-15 | 79.7 |
Msa0099670 | AT3G55050.1 | 26.510 | 298 | 161 | 10 | 285 | 543 | 80 | 358 | 2.51e-15 | 78.6 |
Msa0099670 | AT3G55050.2 | 26.510 | 298 | 161 | 10 | 285 | 543 | 80 | 358 | 2.51e-15 | 78.6 |
Msa0099670 | AT5G36250.1 | 35.714 | 140 | 74 | 4 | 368 | 491 | 207 | 346 | 7.37e-15 | 77.4 |
Msa0099670 | AT1G79630.2 | 28.044 | 271 | 132 | 11 | 280 | 488 | 19 | 288 | 8.57e-15 | 77.0 |
Msa0099670 | AT1G79630.7 | 28.044 | 271 | 132 | 11 | 280 | 488 | 19 | 288 | 8.57e-15 | 77.0 |
Msa0099670 | AT3G05640.2 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099670 | AT3G05640.1 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099670 | AT3G05640.3 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099670 | AT4G33920.1 | 26.144 | 306 | 166 | 11 | 280 | 543 | 51 | 338 | 1.32e-14 | 76.3 |
Msa0099670 | AT1G79630.1 | 28.044 | 271 | 132 | 11 | 280 | 488 | 89 | 358 | 1.49e-14 | 76.6 |
Msa0099670 | AT1G79630.8 | 28.044 | 271 | 132 | 11 | 280 | 488 | 85 | 354 | 1.63e-14 | 76.6 |
Msa0099670 | AT3G27140.1 | 27.757 | 263 | 104 | 6 | 290 | 551 | 19 | 196 | 3.57e-14 | 72.8 |
Msa0099670 | AT1G79630.6 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099670 | AT1G79630.3 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099670 | AT1G79630.4 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099670 | AT1G79630.5 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099670 | AT3G02750.2 | 37.313 | 134 | 68 | 4 | 368 | 485 | 216 | 349 | 1.30e-13 | 73.9 |
Msa0099670 | AT3G02750.1 | 37.313 | 134 | 68 | 4 | 368 | 485 | 216 | 349 | 1.30e-13 | 73.9 |
Msa0099670 | AT5G06750.3 | 27.500 | 240 | 123 | 8 | 290 | 491 | 82 | 308 | 7.48e-13 | 70.9 |
Msa0099670 | AT5G06750.1 | 27.500 | 240 | 123 | 8 | 290 | 491 | 82 | 308 | 7.48e-13 | 70.9 |
Msa0099670 | AT4G33920.2 | 26.939 | 245 | 132 | 8 | 341 | 543 | 16 | 255 | 6.15e-11 | 63.9 |
Msa0099670 | AT2G05050.1 | 33.333 | 138 | 67 | 4 | 416 | 544 | 69 | 190 | 7.20e-11 | 62.0 |
Msa0099670 | AT4G33920.3 | 28.111 | 217 | 112 | 6 | 366 | 543 | 14 | 225 | 8.34e-11 | 63.2 |
Find 181 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGTCTTTGCTTCCTTTC+TGG | 0.045002 | 1_3:-5877396 | None:intergenic |
GCAACTGCGTCTTCCATTTC+TGG | 0.094152 | 1_3:-5874337 | None:intergenic |
GAATCATCATCCTCACTTTC+TGG | 0.164991 | 1_3:-5873914 | None:intergenic |
TTTCACCAATTGTTTCTTAA+AGG | 0.174144 | 1_3:+5874694 | Msa0099670:CDS |
AATTGGATTATACCCCATTA+TGG | 0.180255 | 1_3:+5874287 | Msa0099670:CDS |
GCAGTGGAGCCAACAGTTTC+TGG | 0.231039 | 1_3:-5874761 | None:intergenic |
TAAATTTAGTTGCTTATTCT+AGG | 0.234326 | 1_3:+5877652 | Msa0099670:three_prime_UTR |
TCATAATAAGGGTGGCAATT+TGG | 0.241063 | 1_3:+5873769 | Msa0099670:CDS |
CTCGAAAACGTATACTTCTT+TGG | 0.264509 | 1_3:+5877278 | Msa0099670:CDS |
GTTGCTCACACCGCTGATTT+GGG | 0.265336 | 1_3:+5874103 | Msa0099670:CDS |
TTCGGACGATTGTCATAATA+AGG | 0.265496 | 1_3:+5873757 | Msa0099670:CDS |
TGTTGCTCACACCGCTGATT+TGG | 0.282659 | 1_3:+5874102 | Msa0099670:CDS |
CCGCAAATGACCCATTTCTT+TGG | 0.291037 | 1_3:+5874442 | Msa0099670:CDS |
AGAGGATGAATGTCTCATTT+TGG | 0.293893 | 1_3:+5877204 | Msa0099670:CDS |
ATTCCCATTCAGATGCTAAT+TGG | 0.295899 | 1_3:+5874382 | Msa0099670:CDS |
TTTCCTCGGTCAATGCAATA+TGG | 0.311399 | 1_3:-5874601 | None:intergenic |
CACCGTTGACAAACAAAATT+AGG | 0.314546 | 1_3:+5872811 | Msa0099670:five_prime_UTR |
CGAGGAATGAATTGAACTTC+TGG | 0.323228 | 1_3:-5877175 | None:intergenic |
TGGAATGGCCATCGTGTATT+TGG | 0.332051 | 1_3:+5875035 | Msa0099670:CDS |
TTCTTGCATATTCATCTTCT+CGG | 0.337117 | 1_3:-5874983 | None:intergenic |
TATTTATTGAAATTGAAGTT+TGG | 0.337417 | 1_3:+5873312 | Msa0099670:five_prime_UTR |
GGTAAGTGGGTGTTTAGAAT+TGG | 0.340891 | 1_3:-5872513 | None:intergenic |
TTTGAAACCGTCAATTATTC+CGG | 0.343631 | 1_3:+5877150 | Msa0099670:CDS |
CTTGCAATGTCAAGATCTAT+TGG | 0.345690 | 1_3:+5875062 | Msa0099670:CDS |
GTGATATGAATCCCCATAAT+GGG | 0.351275 | 1_3:-5874300 | None:intergenic |
TCTGCTGCTGCTTGTGCTGC+AGG | 0.357440 | 1_3:-5877352 | None:intergenic |
AGTGATATGAATCCCCATAA+TGG | 0.362495 | 1_3:-5874301 | None:intergenic |
TTGCTTATTCTAGGAATGAT+AGG | 0.368594 | 1_3:+5877661 | Msa0099670:three_prime_UTR |
ACTTTCTGTCTTGTCTAGCT+AGG | 0.371542 | 1_3:+5873560 | Msa0099670:five_prime_UTR |
GAGCAACTGTAGAAGGCTTT+AGG | 0.372631 | 1_3:-5874210 | None:intergenic |
CATCATAGACTCCAAAGAAA+TGG | 0.377707 | 1_3:-5874453 | None:intergenic |
ATTGGATTATACCCCATTAT+GGG | 0.378212 | 1_3:+5874288 | Msa0099670:CDS |
AATCATCATCCTCACTTTCT+GGG | 0.380381 | 1_3:-5873913 | None:intergenic |
TCTGATTCAACTCCAATCTC+TGG | 0.385927 | 1_3:-5874187 | None:intergenic |
AGCTGATGAGCAACTGTAGA+AGG | 0.391208 | 1_3:-5874217 | None:intergenic |
AACAAAACATGATGATTTCA+AGG | 0.402769 | 1_3:+5877463 | Msa0099670:exon |
GGATGATGATTCATTATCAT+TGG | 0.403575 | 1_3:+5873925 | Msa0099670:CDS |
TCATTTGCGGCCTAAAACAC+CGG | 0.408501 | 1_3:-5874429 | None:intergenic |
TTGTCCTATAGGGTCTCCTT+AGG | 0.412982 | 1_3:+5873428 | Msa0099670:five_prime_UTR |
TCAACTATAGAGACAACAAT+TGG | 0.413133 | 1_3:-5873217 | None:intergenic |
GCATATTCATCTTCTCGGTT+CGG | 0.417201 | 1_3:-5874978 | None:intergenic |
GGAAGGAGAAAGTCCTTTGA+TGG | 0.419922 | 1_3:+5873838 | Msa0099670:CDS |
CATTCCTAAGGAGACCCTAT+AGG | 0.420020 | 1_3:-5873432 | None:intergenic |
GGCAATTTGGATGTTGAAAT+CGG | 0.424234 | 1_3:+5873782 | Msa0099670:CDS |
TCTGATAATACTTCAGAAGT+TGG | 0.425515 | 1_3:+5874031 | Msa0099670:CDS |
GGAAACCTTAGCTACAGAAT+TGG | 0.426314 | 1_3:-5873717 | None:intergenic |
CTTTCTGTCTTGTCTAGCTA+GGG | 0.429771 | 1_3:+5873561 | Msa0099670:five_prime_UTR |
CATTTCTTTGGAGTCTATGA+TGG | 0.430905 | 1_3:+5874454 | Msa0099670:CDS |
ATCAACCTTTAAGAAACAAT+TGG | 0.433425 | 1_3:-5874699 | None:intergenic |
GTTGTCTCTATAGTTGATAA+AGG | 0.434512 | 1_3:+5873223 | Msa0099670:five_prime_UTR |
GTGAATCTTGACCCAGAGAT+TGG | 0.434954 | 1_3:+5874175 | Msa0099670:CDS |
TATGTTGCAAAAGTGAGGTT+TGG | 0.435759 | 1_3:+5877885 | Msa0099670:three_prime_UTR |
CAACGAAACTGTTGTAGGTT+CGG | 0.440145 | 1_3:+5873739 | Msa0099670:CDS |
ATCTGCCATCAGCTTAAATC+TGG | 0.441477 | 1_3:-5873681 | None:intergenic |
AAAAGGATCTTAAAATAAGA+AGG | 0.442926 | 1_3:-5873466 | None:intergenic |
TGATGGCCATGGTGGCTCTC+AGG | 0.443960 | 1_3:+5874471 | Msa0099670:CDS |
ATGTGGACGAAGACCAGAAA+TGG | 0.445581 | 1_3:+5874324 | Msa0099670:CDS |
GGAGAGTTGTGAGAAGAAGT+TGG | 0.445998 | 1_3:+5873254 | Msa0099670:five_prime_UTR |
AAAAGTCACTCAACCGGTAT+TGG | 0.448529 | 1_3:+5873811 | Msa0099670:CDS |
TTAAAGGTTGATGCAGAAGT+TGG | 0.451892 | 1_3:+5874710 | Msa0099670:CDS |
AGATGTAACTAATTTGTAAG+TGG | 0.456104 | 1_3:+5877801 | Msa0099670:three_prime_UTR |
ATTCATTCCTCGTGCGAAAG+AGG | 0.459888 | 1_3:+5877186 | Msa0099670:CDS |
ATGAATTGAACTTCTGGATC+CGG | 0.468005 | 1_3:-5877169 | None:intergenic |
CTGATAATACTTCAGAAGTT+GGG | 0.471233 | 1_3:+5874032 | Msa0099670:CDS |
TCTCCTTCCTTTACCAATAC+CGG | 0.472666 | 1_3:-5873824 | None:intergenic |
AATGGAGGTGTTGTTGTATG+TGG | 0.474679 | 1_3:+5873589 | Msa0099670:exon |
AAGTTAACCTCCCACCCCTT+TGG | 0.475455 | 1_3:-5873541 | None:intergenic |
TCATCAGCTGCCTCAGGAAG+AGG | 0.476248 | 1_3:+5874231 | Msa0099670:CDS |
TTTGTCAACGGTGTAGGGTC+TGG | 0.477798 | 1_3:-5872801 | None:intergenic |
TGAGAGAGACTAAATATAGT+TGG | 0.478260 | 1_3:+5872763 | Msa0099670:five_prime_UTR |
TTTAAGCTGATGGCAGATGC+AGG | 0.478440 | 1_3:+5873686 | Msa0099670:CDS |
ATCACCAATTAGCATCTGAA+TGG | 0.480260 | 1_3:-5874386 | None:intergenic |
ATTGTCCAATTCTGTAGCTA+AGG | 0.487066 | 1_3:+5873712 | Msa0099670:CDS |
GTTTCCAACGAAACTGTTGT+AGG | 0.489820 | 1_3:+5873734 | Msa0099670:CDS |
ATCATAGACTCCAAAGAAAT+GGG | 0.490546 | 1_3:-5874452 | None:intergenic |
CACTCAACCGGTATTGGTAA+AGG | 0.490791 | 1_3:+5873817 | Msa0099670:CDS |
CAACATAATTGAAAGGGAGA+TGG | 0.494861 | 1_3:-5877869 | None:intergenic |
CCAAAGAAATGGGTCATTTG+CGG | 0.495267 | 1_3:-5874442 | None:intergenic |
GTCAGTGAAAACAGTAGTAT+AGG | 0.500348 | 1_3:+5873989 | Msa0099670:CDS |
AAGGTTGATGCAGAAGTTGG+AGG | 0.502623 | 1_3:+5874713 | Msa0099670:CDS |
AAACACCGGTTTATTCCATC+AGG | 0.504331 | 1_3:-5874415 | None:intergenic |
TTTGGCTAGTGATGGTCTAT+GGG | 0.504817 | 1_3:+5877222 | Msa0099670:CDS |
AGTTGCTCATCAGCTGCCTC+AGG | 0.504892 | 1_3:+5874225 | Msa0099670:CDS |
TTGCTCACACCGCTGATTTG+GGG | 0.507921 | 1_3:+5874104 | Msa0099670:CDS |
AAACGAAGAGGTGTGTGATC+TGG | 0.509657 | 1_3:+5877255 | Msa0099670:CDS |
TCTGGATCCGGAATAATTGA+CGG | 0.509776 | 1_3:-5877157 | None:intergenic |
ACTACCCTCGGAAAGGGGAG+AGG | 0.509832 | 1_3:+5877321 | Msa0099670:CDS |
ATACCTGAGTGATGTCTTGA+TGG | 0.511140 | 1_3:-5872535 | None:intergenic |
CATGGAACTACCCTCGGAAA+GGG | 0.512080 | 1_3:+5877315 | Msa0099670:CDS |
TATTACAAAAGTCACTCAAC+CGG | 0.514290 | 1_3:+5873805 | Msa0099670:CDS |
CCTCACAGAGCCTTTGTACT+CGG | 0.514596 | 1_3:-5877740 | None:intergenic |
TCACCAATTAGCATCTGAAT+GGG | 0.516982 | 1_3:-5874385 | None:intergenic |
TGATGTCTTGATGGGTAAGT+GGG | 0.518056 | 1_3:-5872526 | None:intergenic |
GGTGTTGTTGTATGTGGTTA+CGG | 0.519900 | 1_3:+5873595 | Msa0099670:CDS |
TGTCTAGCTAGGGATTTCAA+TGG | 0.521186 | 1_3:+5873571 | Msa0099670:exon |
TCAACGGTGTAGGGTCTGGT+TGG | 0.523225 | 1_3:-5872797 | None:intergenic |
TCAGATCTGCTCAACAATAA+CGG | 0.524626 | 1_3:-5873337 | None:intergenic |
TTCTTTGCCACGACAAAGAA+CGG | 0.525190 | 1_3:-5874843 | None:intergenic |
GATGATTCATTATCATTGGA+AGG | 0.525235 | 1_3:+5873929 | Msa0099670:CDS |
TCTCCTTCACTGTAGTGCAT+TGG | 0.527602 | 1_3:+5877616 | Msa0099670:three_prime_UTR |
TCGAATCGCGCTCTCCAGAA+AGG | 0.530906 | 1_3:+5877382 | Msa0099670:CDS |
CGAACCTACAACAGTTTCGT+TGG | 0.535696 | 1_3:-5873738 | None:intergenic |
TCGAGAGCCGTTCTTTGTCG+TGG | 0.537353 | 1_3:+5874836 | Msa0099670:CDS |
TCGGACGATTGTCATAATAA+GGG | 0.538946 | 1_3:+5873758 | Msa0099670:CDS |
GAACGAGTGTAACAGTTGTC+CGG | 0.539242 | 1_3:+5874254 | Msa0099670:CDS |
TTTGGAGTCTATGATGGCCA+TGG | 0.539364 | 1_3:+5874460 | Msa0099670:CDS |
CTATAGGGTCTCCTTAGGAA+TGG | 0.539724 | 1_3:+5873433 | Msa0099670:five_prime_UTR |
TCAATTAGTTGAAACATGAA+AGG | 0.540711 | 1_3:+5873508 | Msa0099670:five_prime_UTR |
CTACCCTCGGAAAGGGGAGA+GGG | 0.541861 | 1_3:+5877322 | Msa0099670:CDS |
CTGATTCAACTCCAATCTCT+GGG | 0.546780 | 1_3:-5874186 | None:intergenic |
ACGCAGTTGCAACTGTTCCT+CGG | 0.546920 | 1_3:+5874350 | Msa0099670:CDS |
ATCGATGGAGGTCTCAAAGA+TGG | 0.546981 | 1_3:+5874647 | Msa0099670:CDS |
TGGTCCACTGATAACGCCAT+TGG | 0.547435 | 1_3:-5874866 | None:intergenic |
CATCAGCTGCCTCAGGAAGA+GGG | 0.548267 | 1_3:+5874232 | Msa0099670:CDS |
CTAAATATAGTTGGAAGTGA+AGG | 0.553507 | 1_3:+5872772 | Msa0099670:five_prime_UTR |
ATTGGTGATCGAGTACCTGA+TGG | 0.554508 | 1_3:+5874400 | Msa0099670:CDS |
GAGTACCTGATGGAATAAAC+CGG | 0.557358 | 1_3:+5874410 | Msa0099670:CDS |
TCAATTATGTTGCAAAAGTG+AGG | 0.557438 | 1_3:+5877880 | Msa0099670:three_prime_UTR |
CTCAATCATAGCTACACACA+TGG | 0.557755 | 1_3:+5873652 | Msa0099670:CDS |
GTGATGTCTTGATGGGTAAG+TGG | 0.558970 | 1_3:-5872527 | None:intergenic |
CGAGGAAATAAAACTTGTCA+AGG | 0.560205 | 1_3:+5874616 | Msa0099670:CDS |
AAAGGATCTTAAAATAAGAA+GGG | 0.567307 | 1_3:-5873465 | None:intergenic |
TGGGATATCATATCCATCAA+AGG | 0.572598 | 1_3:-5873851 | None:intergenic |
CATTCATCCTCTTTCGCACG+AGG | 0.572975 | 1_3:-5877193 | None:intergenic |
TTCTCTATGTCTATCGAACA+TGG | 0.573710 | 1_3:-5874058 | None:intergenic |
TTGGATTATACCCCATTATG+GGG | 0.575592 | 1_3:+5874289 | Msa0099670:CDS |
TTGTCGTGGCAAAGAACCAA+TGG | 0.576382 | 1_3:+5874850 | Msa0099670:CDS |
CAAGATTCACTGCCACAGCA+AGG | 0.577058 | 1_3:-5874162 | None:intergenic |
TTGTTCTTATACTTTCGTTG+AGG | 0.577678 | 1_3:-5877445 | None:intergenic |
AAGATTCACTGCCACAGCAA+GGG | 0.578634 | 1_3:-5874161 | None:intergenic |
ACTACCCTCTCCCCTTTCCG+AGG | 0.579476 | 1_3:-5877326 | None:intergenic |
AAGATGGTTGCCAAGATCAG+TGG | 0.579539 | 1_3:+5874663 | Msa0099670:CDS |
AGTACAGAGGATGAATGCCC+TGG | 0.580491 | 1_3:-5877557 | None:intergenic |
TATGCAAGAATTGAAGCAGC+CGG | 0.584084 | 1_3:+5874996 | Msa0099670:CDS |
TGCTCACACCGCTGATTTGG+GGG | 0.585335 | 1_3:+5874105 | Msa0099670:CDS |
CTAGCTAGGGATTTCAATGG+AGG | 0.591613 | 1_3:+5873574 | Msa0099670:exon |
AGATTCACTGCCACAGCAAG+GGG | 0.592961 | 1_3:-5874160 | None:intergenic |
GCATGGAACTACCCTCGGAA+AGG | 0.594104 | 1_3:+5877314 | Msa0099670:CDS |
AAACGGCATGGAACTACCCT+CGG | 0.595649 | 1_3:+5877309 | Msa0099670:CDS |
AGAACCAATGGCGTTATCAG+TGG | 0.595715 | 1_3:+5874862 | Msa0099670:CDS |
AATCCAATGCACTACAGTGA+AGG | 0.601510 | 1_3:-5877619 | None:intergenic |
GTCAAGGAAAGTCTAATCGA+TGG | 0.602817 | 1_3:+5874632 | Msa0099670:CDS |
TATAAGAGCAACAACAGCAG+TGG | 0.605251 | 1_3:-5874777 | None:intergenic |
AGTGAAAACAGTAGTATAGG+TGG | 0.606908 | 1_3:+5873992 | Msa0099670:CDS |
TGTGATACCAAAGGGGTGGG+AGG | 0.608389 | 1_3:+5873534 | Msa0099670:five_prime_UTR |
TGTATCCAGATTTAAGCTGA+TGG | 0.613837 | 1_3:+5873676 | Msa0099670:CDS |
GTTACGGTGTCAATAAGAGT+AGG | 0.615266 | 1_3:+5873611 | Msa0099670:CDS |
ATGGAACTACCCTCGGAAAG+GGG | 0.615281 | 1_3:+5877316 | Msa0099670:CDS |
TACTATAATACATCTTACAT+AGG | 0.617454 | 1_3:+5877576 | Msa0099670:three_prime_UTR |
TTACATCTTTATAAACACAC+TGG | 0.617919 | 1_3:-5877786 | None:intergenic |
CAACCGGTATTGGTAAAGGA+AGG | 0.622193 | 1_3:+5873821 | Msa0099670:CDS |
CTACCCTCTCCCCTTTCCGA+GGG | 0.624958 | 1_3:-5877325 | None:intergenic |
CAACATCACTGTGATTGTTG+TGG | 0.626755 | 1_3:+5877414 | Msa0099670:CDS |
ATCATCATCCTCACTTTCTG+GGG | 0.630351 | 1_3:-5873912 | None:intergenic |
GGAAAAGTGATACAGTGGAA+TGG | 0.631701 | 1_3:+5875020 | Msa0099670:CDS |
GAAGAAGTTGGTTATGCTTG+TGG | 0.633912 | 1_3:+5873266 | Msa0099670:five_prime_UTR |
ACACTCGTTCCCTCTTCCTG+AGG | 0.634544 | 1_3:-5874241 | None:intergenic |
ACGATTAGCCCCAGAAAGTG+AGG | 0.636780 | 1_3:+5873904 | Msa0099670:CDS |
AGTTTACCTGAGAGCCACCA+TGG | 0.637746 | 1_3:-5874477 | None:intergenic |
TGGGGATTCATATCACTATG+TGG | 0.637964 | 1_3:+5874307 | Msa0099670:CDS |
GGAGTCTATGATGGCCATGG+TGG | 0.638051 | 1_3:+5874463 | Msa0099670:CDS |
TTAAGCTGATGGCAGATGCA+GGG | 0.638908 | 1_3:+5873687 | Msa0099670:CDS |
TATTATGCCTCCGAGTACAA+AGG | 0.640166 | 1_3:+5877730 | Msa0099670:three_prime_UTR |
TAAGATGTATTATAGTACAG+AGG | 0.640406 | 1_3:-5877570 | None:intergenic |
GTTGTTGCGCCAGAAACTGT+TGG | 0.640473 | 1_3:+5874752 | Msa0099670:CDS |
GACGATTGTCATAATAAGGG+TGG | 0.641173 | 1_3:+5873761 | Msa0099670:CDS |
CCGGAGGAAAAGTGATACAG+TGG | 0.650164 | 1_3:+5875015 | Msa0099670:CDS |
ATAATTGAAAGGGAGATGGA+TGG | 0.650716 | 1_3:-5877865 | None:intergenic |
CACAGAGCCTTTGTACTCGG+AGG | 0.655282 | 1_3:-5877737 | None:intergenic |
CATATTATAGTTGCAAACTG+TGG | 0.656409 | 1_3:+5874809 | Msa0099670:CDS |
TACCTGAGTGATGTCTTGAT+GGG | 0.665263 | 1_3:-5872534 | None:intergenic |
TGATATGAATCCCCATAATG+GGG | 0.675948 | 1_3:-5874299 | None:intergenic |
GCAAGAATTGAAGCAGCCGG+AGG | 0.679321 | 1_3:+5874999 | Msa0099670:CDS |
AAGGAAAGTCTAATCGATGG+AGG | 0.680492 | 1_3:+5874635 | Msa0099670:CDS |
TATGAATGAACCCCTTGCTG+TGG | 0.687921 | 1_3:+5874150 | Msa0099670:CDS |
TACCCATCAAGACATCACTC+AGG | 0.689508 | 1_3:+5872532 | Msa0099670:five_prime_UTR |
TAGTTGATAAAGGTAGACAA+AGG | 0.698398 | 1_3:+5873233 | Msa0099670:five_prime_UTR |
CATCCATATTGCATTGACCG+AGG | 0.698699 | 1_3:+5874598 | Msa0099670:CDS |
CCGAGTACAAAGGCTCTGTG+AGG | 0.707586 | 1_3:+5877740 | Msa0099670:three_prime_UTR |
CAAGAACACCAAATACACGA+TGG | 0.734296 | 1_3:-5875043 | None:intergenic |
GGATGTGATGACAAACGAAG+AGG | 0.744441 | 1_3:+5877243 | Msa0099670:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATTTTTAAGATAAAATTT+AGG | + | chr1_3:5875752-5875771 | Msa0099670:intron | 10.0% |
!!! | GTTTAATTTTTTTATTTGAA+TGG | + | chr1_3:5876946-5876965 | Msa0099670:intron | 10.0% |
!! | AAAGAGACAAATTTAAAAAA+GGG | - | chr1_3:5873112-5873131 | None:intergenic | 15.0% |
!! | AAAAGAGACAAATTTAAAAA+AGG | - | chr1_3:5873113-5873132 | None:intergenic | 15.0% |
!!! | TAAATTTGTCTCTTTTTAAT+TGG | + | chr1_3:5873117-5873136 | Msa0099670:intron | 15.0% |
!!! | TTGTATTTTTATATGTTTTC+AGG | + | chr1_3:5873188-5873207 | Msa0099670:intron | 15.0% |
!! | TATTTATTGAAATTGAAGTT+TGG | + | chr1_3:5873312-5873331 | Msa0099670:five_prime_UTR | 15.0% |
!!! | AACTAAAACACTTTTATTTT+GGG | - | chr1_3:5873873-5873892 | None:intergenic | 15.0% |
!!! | ATGATAAATTTTACTTCATT+TGG | + | chr1_3:5875098-5875117 | Msa0099670:intron | 15.0% |
!! | AAGTTTATTCCATAAATTAT+AGG | + | chr1_3:5875470-5875489 | Msa0099670:intron | 15.0% |
!!! | TGTTTTTCCATTTAATTAAT+TGG | + | chr1_3:5876214-5876233 | Msa0099670:intron | 15.0% |
!! | TAAAAAAATTAGGATCAAAA+TGG | - | chr1_3:5876371-5876390 | None:intergenic | 15.0% |
!! | TCTAAAAACTAAAAATAAAG+TGG | - | chr1_3:5876499-5876518 | None:intergenic | 15.0% |
!! | AAAGGATCTTAAAATAAGAA+GGG | - | chr1_3:5873468-5873487 | None:intergenic | 20.0% |
!! | AAAAGGATCTTAAAATAAGA+AGG | - | chr1_3:5873469-5873488 | None:intergenic | 20.0% |
!!! | CAACTAAAACACTTTTATTT+TGG | - | chr1_3:5873874-5873893 | None:intergenic | 20.0% |
!! | CATAATAAATAAGCATGTAT+CGG | - | chr1_3:5875197-5875216 | None:intergenic | 20.0% |
!! | ATAAACCAGTACAAAATAAT+TGG | + | chr1_3:5875529-5875548 | Msa0099670:intron | 20.0% |
!!! | TAATTTTTCCTCACAAAATT+CGG | + | chr1_3:5875563-5875582 | Msa0099670:intron | 20.0% |
!!! | AGAGTTGTTTTTCTTTTTTT+AGG | + | chr1_3:5876074-5876093 | Msa0099670:intron | 20.0% |
!!! | GAGTTGTTTTTCTTTTTTTA+GGG | + | chr1_3:5876075-5876094 | Msa0099670:intron | 20.0% |
!! | AATCATGTGTACTAATTTAA+GGG | + | chr1_3:5876146-5876165 | Msa0099670:intron | 20.0% |
!! | GTACTTTATTAAGAAATGAA+TGG | + | chr1_3:5876177-5876196 | Msa0099670:intron | 20.0% |
!! | ACGAAATCCAATTAATTAAA+TGG | - | chr1_3:5876224-5876243 | None:intergenic | 20.0% |
!!! | TTTCAAGCTCTAAAAAAATT+AGG | - | chr1_3:5876381-5876400 | None:intergenic | 20.0% |
!!! | TATCTTAATATTTCTGATGA+TGG | + | chr1_3:5876761-5876780 | Msa0099670:intron | 20.0% |
!! | TAATTGTGTTGTGTTTATAA+AGG | + | chr1_3:5877079-5877098 | Msa0099670:intron | 20.0% |
!! | TACTATAATACATCTTACAT+AGG | + | chr1_3:5877576-5877595 | Msa0099670:three_prime_UTR | 20.0% |
!! | TAAATTTAGTTGCTTATTCT+AGG | + | chr1_3:5877652-5877671 | Msa0099670:three_prime_UTR | 20.0% |
!! | AATATGCTAAAAAATGTCAA+AGG | - | chr1_3:5877702-5877721 | None:intergenic | 20.0% |
!!! | TACCTAATTTTGTTTGTCAA+CGG | - | chr1_3:5872816-5872835 | None:intergenic | 25.0% |
!!! | AAAAGGGTTGTTATCTTTTT+TGG | + | chr1_3:5872982-5873001 | Msa0099670:intron | 25.0% |
! | TTTCTTGTGTTTGTAGATAA+GGG | + | chr1_3:5873069-5873088 | Msa0099670:intron | 25.0% |
!!! | ATTTGTCTCTTTTTAATTGG+TGG | + | chr1_3:5873120-5873139 | Msa0099670:intron | 25.0% |
!!! | TTTGTCTCTTTTTAATTGGT+GGG | + | chr1_3:5873121-5873140 | Msa0099670:intron | 25.0% |
! | TCAATTAGTTGAAACATGAA+AGG | + | chr1_3:5873508-5873527 | Msa0099670:five_prime_UTR | 25.0% |
!! | GAGCTTAATTTTTCTCATTT+AGG | + | chr1_3:5874553-5874572 | Msa0099670:intron | 25.0% |
!! | TTTCACCAATTGTTTCTTAA+AGG | + | chr1_3:5874694-5874713 | Msa0099670:CDS | 25.0% |
!! | ATCAACCTTTAAGAAACAAT+TGG | - | chr1_3:5874702-5874721 | None:intergenic | 25.0% |
! | TAAAATTACAAACTCCAACA+CGG | + | chr1_3:5875130-5875149 | Msa0099670:intron | 25.0% |
!! | TCTTTTAGTCAGTTATTTAG+AGG | + | chr1_3:5875903-5875922 | Msa0099670:intron | 25.0% |
!! | CTTTTAGTCAGTTATTTAGA+GGG | + | chr1_3:5875904-5875923 | Msa0099670:intron | 25.0% |
! | TACACATGATTGATATAAAC+TGG | - | chr1_3:5876137-5876156 | None:intergenic | 25.0% |
! | CAATCATGTGTACTAATTTA+AGG | + | chr1_3:5876145-5876164 | Msa0099670:intron | 25.0% |
! | GATGATTAATAAGCAGTAAA+TGG | - | chr1_3:5876324-5876343 | None:intergenic | 25.0% |
! | CTTATTAATCATCCTTGAAT+GGG | + | chr1_3:5876331-5876350 | Msa0099670:intron | 25.0% |
! | TTATTAATCATCCTTGAATG+GGG | + | chr1_3:5876332-5876351 | Msa0099670:intron | 25.0% |
!!! | AATTTAGTTTGATCATTCCT+CGG | + | chr1_3:5876605-5876624 | Msa0099670:intron | 25.0% |
! | AACAAAACATGATGATTTCA+AGG | + | chr1_3:5877463-5877482 | Msa0099670:exon | 25.0% |
! | TAAGATGTATTATAGTACAG+AGG | - | chr1_3:5877573-5877592 | None:intergenic | 25.0% |
! | TTACATCTTTATAAACACAC+TGG | - | chr1_3:5877789-5877808 | None:intergenic | 25.0% |
!! | AGATGTAACTAATTTGTAAG+TGG | + | chr1_3:5877801-5877820 | Msa0099670:three_prime_UTR | 25.0% |
!! | CTTTTGCAACATAATTGAAA+GGG | - | chr1_3:5877878-5877897 | None:intergenic | 25.0% |
!! | ACTTTTGCAACATAATTGAA+AGG | - | chr1_3:5877879-5877898 | None:intergenic | 25.0% |
!! | ACTGAGCTGTTTTCATTTAA+TGG | + | chr1_3:5872608-5872627 | Msa0099670:intron | 30.0% |
!! | CTGAGCTGTTTTCATTTAAT+GGG | + | chr1_3:5872609-5872628 | Msa0099670:intron | 30.0% |
TGGGTCAAGATTATTAAGTA+AGG | + | chr1_3:5872628-5872647 | Msa0099670:intron | 30.0% | |
GGGTCAAGATTATTAAGTAA+GGG | + | chr1_3:5872629-5872648 | Msa0099670:intron | 30.0% | |
TGAGAGAGACTAAATATAGT+TGG | + | chr1_3:5872763-5872782 | Msa0099670:five_prime_UTR | 30.0% | |
CTAAATATAGTTGGAAGTGA+AGG | + | chr1_3:5872772-5872791 | Msa0099670:five_prime_UTR | 30.0% | |
!!! | TTAAGACTTTGCACTTTTTC+TGG | + | chr1_3:5873020-5873039 | Msa0099670:intron | 30.0% |
!!! | TAAGACTTTGCACTTTTTCT+GGG | + | chr1_3:5873021-5873040 | Msa0099670:intron | 30.0% |
CTTTCTTGTGTTTGTAGATA+AGG | + | chr1_3:5873068-5873087 | Msa0099670:intron | 30.0% | |
TTCTTGTGTTTGTAGATAAG+GGG | + | chr1_3:5873070-5873089 | Msa0099670:intron | 30.0% | |
!! | TTGTCTCTTTTTAATTGGTG+GGG | + | chr1_3:5873122-5873141 | Msa0099670:intron | 30.0% |
TCAACTATAGAGACAACAAT+TGG | - | chr1_3:5873220-5873239 | None:intergenic | 30.0% | |
!! | GTTGTCTCTATAGTTGATAA+AGG | + | chr1_3:5873223-5873242 | Msa0099670:five_prime_UTR | 30.0% |
!! | TAGTTGATAAAGGTAGACAA+AGG | + | chr1_3:5873233-5873252 | Msa0099670:five_prime_UTR | 30.0% |
! | TTTTGCTTCTTTTGTCCTAT+AGG | + | chr1_3:5873417-5873436 | Msa0099670:five_prime_UTR | 30.0% |
! | TTTGCTTCTTTTGTCCTATA+GGG | + | chr1_3:5873418-5873437 | Msa0099670:five_prime_UTR | 30.0% |
!! | AAAGGTTTTGTGATACCAAA+GGG | + | chr1_3:5873526-5873545 | Msa0099670:five_prime_UTR | 30.0% |
TATTACAAAAGTCACTCAAC+CGG | + | chr1_3:5873805-5873824 | Msa0099670:CDS | 30.0% | |
GGATGATGATTCATTATCAT+TGG | + | chr1_3:5873925-5873944 | Msa0099670:CDS | 30.0% | |
GATGATTCATTATCATTGGA+AGG | + | chr1_3:5873929-5873948 | Msa0099670:CDS | 30.0% | |
TCTGATAATACTTCAGAAGT+TGG | + | chr1_3:5874031-5874050 | Msa0099670:CDS | 30.0% | |
CTGATAATACTTCAGAAGTT+GGG | + | chr1_3:5874032-5874051 | Msa0099670:CDS | 30.0% | |
AATCCAATTCAAAAACACTC+CGG | - | chr1_3:5874276-5874295 | None:intergenic | 30.0% | |
AATTGGATTATACCCCATTA+TGG | + | chr1_3:5874287-5874306 | Msa0099670:CDS | 30.0% | |
ATTGGATTATACCCCATTAT+GGG | + | chr1_3:5874288-5874307 | Msa0099670:CDS | 30.0% | |
ATCATAGACTCCAAAGAAAT+GGG | - | chr1_3:5874455-5874474 | None:intergenic | 30.0% | |
!!! | CTTGACAAGTTTTATTTCCT+CGG | - | chr1_3:5874618-5874637 | None:intergenic | 30.0% |
!!! | AAACTTTTTTCCACTGATCT+TGG | - | chr1_3:5874676-5874695 | None:intergenic | 30.0% |
CATATTATAGTTGCAAACTG+TGG | + | chr1_3:5874809-5874828 | Msa0099670:CDS | 30.0% | |
TCTAGAAGCAACTTACTTTA+TGG | - | chr1_3:5874889-5874908 | None:intergenic | 30.0% | |
TTCTTGCATATTCATCTTCT+CGG | - | chr1_3:5874986-5875005 | None:intergenic | 30.0% | |
!! | AAACACTTTTTGGACATTGA+GGG | - | chr1_3:5875303-5875322 | None:intergenic | 30.0% |
!! | TAAACACTTTTTGGACATTG+AGG | - | chr1_3:5875304-5875323 | None:intergenic | 30.0% |
!! | CAATGTCCAAAAAGTGTTTA+AGG | + | chr1_3:5875304-5875323 | Msa0099670:intron | 30.0% |
AACAAAGAGAGAGAAAAAGT+TGG | + | chr1_3:5875335-5875354 | Msa0099670:intron | 30.0% | |
CCTCTTACACCTATAATTTA+TGG | - | chr1_3:5875482-5875501 | None:intergenic | 30.0% | |
CCATAAATTATAGGTGTAAG+AGG | + | chr1_3:5875479-5875498 | Msa0099670:intron | 30.0% | |
AAATTATAGGTGTAAGAGGT+TGG | + | chr1_3:5875483-5875502 | Msa0099670:intron | 30.0% | |
!! | CCAAACCAATTATTTTGTAC+TGG | - | chr1_3:5875537-5875556 | None:intergenic | 30.0% |
CCAGTACAAAATAATTGGTT+TGG | + | chr1_3:5875534-5875553 | Msa0099670:intron | 30.0% | |
ACACACTGTAAATGATTCAA+AGG | + | chr1_3:5875936-5875955 | Msa0099670:intron | 30.0% | |
!! | GGTATCTTTAGTTCTAAAGA+GGG | + | chr1_3:5875971-5875990 | Msa0099670:intron | 30.0% |
!! | TAGAGGTATCTTCTATAATC+TGG | + | chr1_3:5876004-5876023 | Msa0099670:intron | 30.0% |
TACACAGGATTGATATAAAC+TGG | - | chr1_3:5876031-5876050 | None:intergenic | 30.0% | |
TCAATCCTGTGTACTAATTT+CGG | + | chr1_3:5876038-5876057 | Msa0099670:intron | 30.0% | |
!! | GTTGTTGATTACTCAACTTT+TGG | + | chr1_3:5876110-5876129 | Msa0099670:intron | 30.0% |
! | ACTGATTCAGAATTTCAGAT+GGG | - | chr1_3:5876288-5876307 | None:intergenic | 30.0% |
! | ATCTGAAATTCTGAATCAGT+GGG | + | chr1_3:5876288-5876307 | Msa0099670:intron | 30.0% |
GCTTATTAATCATCCTTGAA+TGG | + | chr1_3:5876330-5876349 | Msa0099670:intron | 30.0% | |
!! | ATATTTGTTTTCCCCATTCA+AGG | - | chr1_3:5876346-5876365 | None:intergenic | 30.0% |
! | ATAACCTATTTTCCCTTTGT+AGG | + | chr1_3:5876402-5876421 | Msa0099670:intron | 30.0% |
ATTCGTCATTTATGTTCAAC+AGG | - | chr1_3:5876456-5876475 | None:intergenic | 30.0% | |
GAGGAATGATCAAACTAAAT+TGG | - | chr1_3:5876606-5876625 | None:intergenic | 30.0% | |
AAGGATACTGTATGAAAAGA+GGG | - | chr1_3:5876682-5876701 | None:intergenic | 30.0% | |
ACTTGATTCTCTTAGAACTA+CGG | - | chr1_3:5876923-5876942 | None:intergenic | 30.0% | |
GAATGGAAAATGCACAAAAT+AGG | + | chr1_3:5876963-5876982 | Msa0099670:intron | 30.0% | |
AATCAAATACACAAGCAAGT+TGG | - | chr1_3:5877046-5877065 | None:intergenic | 30.0% | |
AAACACAACACAATTACTGT+GGG | - | chr1_3:5877075-5877094 | None:intergenic | 30.0% | |
TAAACACAACACAATTACTG+TGG | - | chr1_3:5877076-5877095 | None:intergenic | 30.0% | |
! | TTTGAAACCGTCAATTATTC+CGG | + | chr1_3:5877150-5877169 | Msa0099670:CDS | 30.0% |
CTTCTTTGGTACAAGAAAAA+CGG | + | chr1_3:5877292-5877311 | Msa0099670:CDS | 30.0% | |
TTGTTCTTATACTTTCGTTG+AGG | - | chr1_3:5877448-5877467 | None:intergenic | 30.0% | |
! | TTGCTTATTCTAGGAATGAT+AGG | + | chr1_3:5877661-5877680 | Msa0099670:three_prime_UTR | 30.0% |
! | CTAAAAAATGTCAAAGGCAT+TGG | - | chr1_3:5877696-5877715 | None:intergenic | 30.0% |
TCAATTATGTTGCAAAAGTG+AGG | + | chr1_3:5877880-5877899 | Msa0099670:three_prime_UTR | 30.0% | |
!!! | TTTGCTTTTTCCCAATCCAT+GGG | + | chr1_3:5872713-5872732 | Msa0099670:intron | 35.0% |
!! | TTTTGTTTGTCAACGGTGTA+GGG | - | chr1_3:5872809-5872828 | None:intergenic | 35.0% |
!! | ATTTTGTTTGTCAACGGTGT+AGG | - | chr1_3:5872810-5872829 | None:intergenic | 35.0% |
CACCGTTGACAAACAAAATT+AGG | + | chr1_3:5872811-5872830 | Msa0099670:five_prime_UTR | 35.0% | |
AGGCAACTCTATGTGAAAAA+GGG | + | chr1_3:5872966-5872985 | Msa0099670:intron | 35.0% | |
!!! | GGGGTTTTAATTTTCTTGAG+TGG | + | chr1_3:5873141-5873160 | Msa0099670:intron | 35.0% |
TCAGATCTGCTCAACAATAA+CGG | - | chr1_3:5873340-5873359 | None:intergenic | 35.0% | |
! | GGTAACATTTTCCATTCCTA+AGG | - | chr1_3:5873447-5873466 | None:intergenic | 35.0% |
! | TCCTTTTCAATCAGAAAAGC+AGG | + | chr1_3:5873482-5873501 | Msa0099670:five_prime_UTR | 35.0% |
!! | ACCTGCTTTTCTGATTGAAA+AGG | - | chr1_3:5873486-5873505 | None:intergenic | 35.0% |
!! | GAAAGGTTTTGTGATACCAA+AGG | + | chr1_3:5873525-5873544 | Msa0099670:five_prime_UTR | 35.0% |
!! | AAGGTTTTGTGATACCAAAG+GGG | + | chr1_3:5873527-5873546 | Msa0099670:five_prime_UTR | 35.0% |
TGTATCCAGATTTAAGCTGA+TGG | + | chr1_3:5873676-5873695 | Msa0099670:CDS | 35.0% | |
ATTGTCCAATTCTGTAGCTA+AGG | + | chr1_3:5873712-5873731 | Msa0099670:CDS | 35.0% | |
TTCGGACGATTGTCATAATA+AGG | + | chr1_3:5873757-5873776 | Msa0099670:CDS | 35.0% | |
TCGGACGATTGTCATAATAA+GGG | + | chr1_3:5873758-5873777 | Msa0099670:CDS | 35.0% | |
TCATAATAAGGGTGGCAATT+TGG | + | chr1_3:5873769-5873788 | Msa0099670:CDS | 35.0% | |
GGCAATTTGGATGTTGAAAT+CGG | + | chr1_3:5873782-5873801 | Msa0099670:CDS | 35.0% | |
TGGGATATCATATCCATCAA+AGG | - | chr1_3:5873854-5873873 | None:intergenic | 35.0% | |
AATCATCATCCTCACTTTCT+GGG | - | chr1_3:5873916-5873935 | None:intergenic | 35.0% | |
GTCAGTGAAAACAGTAGTAT+AGG | + | chr1_3:5873989-5874008 | Msa0099670:CDS | 35.0% | |
AGTGAAAACAGTAGTATAGG+TGG | + | chr1_3:5873992-5874011 | Msa0099670:CDS | 35.0% | |
TTCTCTATGTCTATCGAACA+TGG | - | chr1_3:5874061-5874080 | None:intergenic | 35.0% | |
TTGGATTATACCCCATTATG+GGG | + | chr1_3:5874289-5874308 | Msa0099670:CDS | 35.0% | |
TGATATGAATCCCCATAATG+GGG | - | chr1_3:5874302-5874321 | None:intergenic | 35.0% | |
GTGATATGAATCCCCATAAT+GGG | - | chr1_3:5874303-5874322 | None:intergenic | 35.0% | |
AGTGATATGAATCCCCATAA+TGG | - | chr1_3:5874304-5874323 | None:intergenic | 35.0% | |
! | ATGGGAATTTCTAAAAACCG+AGG | - | chr1_3:5874370-5874389 | None:intergenic | 35.0% |
ATTCCCATTCAGATGCTAAT+TGG | + | chr1_3:5874382-5874401 | Msa0099670:CDS | 35.0% | |
TCACCAATTAGCATCTGAAT+GGG | - | chr1_3:5874388-5874407 | None:intergenic | 35.0% | |
ATCACCAATTAGCATCTGAA+TGG | - | chr1_3:5874389-5874408 | None:intergenic | 35.0% | |
! | ATGGAATAAACCGGTGTTTT+AGG | + | chr1_3:5874419-5874438 | Msa0099670:CDS | 35.0% |
CATCATAGACTCCAAAGAAA+TGG | - | chr1_3:5874456-5874475 | None:intergenic | 35.0% | |
!! | CATTTCTTTGGAGTCTATGA+TGG | + | chr1_3:5874454-5874473 | Msa0099670:CDS | 35.0% |
TCAGACAAGGCTAAAATCAA+CGG | - | chr1_3:5874518-5874537 | None:intergenic | 35.0% | |
AGTGAGAGTTTATTCAGACA+AGG | - | chr1_3:5874531-5874550 | None:intergenic | 35.0% | |
CGAGGAAATAAAACTTGTCA+AGG | + | chr1_3:5874616-5874635 | Msa0099670:CDS | 35.0% | |
!! | TTAAAGGTTGATGCAGAAGT+TGG | + | chr1_3:5874710-5874729 | Msa0099670:CDS | 35.0% |
CTTGCAATGTCAAGATCTAT+TGG | + | chr1_3:5875062-5875081 | Msa0099670:CDS | 35.0% | |
! | CCTAGATTTTCACATTAGCA+GGG | - | chr1_3:5875165-5875184 | None:intergenic | 35.0% |
! | TCCTAGATTTTCACATTAGC+AGG | - | chr1_3:5875166-5875185 | None:intergenic | 35.0% |
!! | AACACTTTTTGGACATTGAG+GGG | - | chr1_3:5875302-5875321 | None:intergenic | 35.0% |
! | GACACACCTTAAACACTTTT+TGG | - | chr1_3:5875313-5875332 | None:intergenic | 35.0% |
GAAAGTGAGAAGAGAGAAAA+GGG | - | chr1_3:5875362-5875381 | None:intergenic | 35.0% | |
AGAAAGTGAGAAGAGAGAAA+AGG | - | chr1_3:5875363-5875382 | None:intergenic | 35.0% | |
! | ATGCTAACTAAGACTTGGTT+TGG | - | chr1_3:5875394-5875413 | None:intergenic | 35.0% |
TGATCATGCTAACTAAGACT+TGG | - | chr1_3:5875399-5875418 | None:intergenic | 35.0% | |
! | GGTTTAATCCGAATTTTGTG+AGG | - | chr1_3:5875574-5875593 | None:intergenic | 35.0% |
! | CCAATGTTTCTTCATCGATT+TGG | - | chr1_3:5875595-5875614 | None:intergenic | 35.0% |
CCAAATCGATGAAGAAACAT+TGG | + | chr1_3:5875592-5875611 | Msa0099670:intron | 35.0% | |
! | TCGATGAAGAAACATTGGTT+TGG | + | chr1_3:5875597-5875616 | Msa0099670:intron | 35.0% |
AGATAAAGACATGTGTCCTA+CGG | + | chr1_3:5875804-5875823 | Msa0099670:intron | 35.0% | |
ATTCAAAGGAGAGAATAGAG+CGG | + | chr1_3:5875950-5875969 | Msa0099670:intron | 35.0% | |
!! | CGGTATCTTTAGTTCTAAAG+AGG | + | chr1_3:5875970-5875989 | Msa0099670:intron | 35.0% |
!!! | AAGAGGGATTTTGAGATTAG+AGG | + | chr1_3:5875987-5876006 | Msa0099670:intron | 35.0% |
AATTGGATTTCGTGAATGTG+AGG | + | chr1_3:5876231-5876250 | Msa0099670:intron | 35.0% | |
ATTGGATTTCGTGAATGTGA+GGG | + | chr1_3:5876232-5876251 | Msa0099670:intron | 35.0% | |
TGGGAACATAAAGTGATTTG+CGG | - | chr1_3:5876269-5876288 | None:intergenic | 35.0% | |
!! | CACTGATTCAGAATTTCAGA+TGG | - | chr1_3:5876289-5876308 | None:intergenic | 35.0% |
! | CATCTGAAATTCTGAATCAG+TGG | + | chr1_3:5876287-5876306 | Msa0099670:intron | 35.0% |
AATGCCTACAAAGGGAAAAT+AGG | - | chr1_3:5876409-5876428 | None:intergenic | 35.0% | |
AGGATACTGTATGAAAAGAG+GGG | - | chr1_3:5876681-5876700 | None:intergenic | 35.0% | |
GAAGGATACTGTATGAAAAG+AGG | - | chr1_3:5876683-5876702 | None:intergenic | 35.0% | |
CGAAAAATGTTTAACGCAGA+AGG | - | chr1_3:5876701-5876720 | None:intergenic | 35.0% | |
! | GCACAATGTTGAGAATCTTT+TGG | + | chr1_3:5876791-5876810 | Msa0099670:intron | 35.0% |
TGGAAAAGAACACTTGTCAT+TGG | + | chr1_3:5876811-5876830 | Msa0099670:intron | 35.0% | |
AACCACTAGCAAATTCAGAA+TGG | - | chr1_3:5876844-5876863 | None:intergenic | 35.0% | |
TGAAAATCACATCAAGGGTA+AGG | - | chr1_3:5877119-5877138 | None:intergenic | 35.0% | |
! | TTACCCTTGATGTGATTTTC+AGG | + | chr1_3:5877118-5877137 | Msa0099670:intron | 35.0% |
TCTCCTGAAAATCACATCAA+GGG | - | chr1_3:5877124-5877143 | None:intergenic | 35.0% | |
ATGAATTGAACTTCTGGATC+CGG | - | chr1_3:5877172-5877191 | None:intergenic | 35.0% | |
! | AGAGGATGAATGTCTCATTT+TGG | + | chr1_3:5877204-5877223 | Msa0099670:CDS | 35.0% |
CTCGAAAACGTATACTTCTT+TGG | + | chr1_3:5877278-5877297 | Msa0099670:CDS | 35.0% | |
! | TTGCCCATTAATTTTTCACC+AGG | + | chr1_3:5877539-5877558 | Msa0099670:three_prime_UTR | 35.0% |
! | TGCCCATTAATTTTTCACCA+GGG | + | chr1_3:5877540-5877559 | Msa0099670:three_prime_UTR | 35.0% |
TGCCCTGGTGAAAAATTAAT+GGG | - | chr1_3:5877545-5877564 | None:intergenic | 35.0% | |
ATGCCCTGGTGAAAAATTAA+TGG | - | chr1_3:5877546-5877565 | None:intergenic | 35.0% | |
ATAATTGAAAGGGAGATGGA+TGG | - | chr1_3:5877868-5877887 | None:intergenic | 35.0% | |
CAACATAATTGAAAGGGAGA+TGG | - | chr1_3:5877872-5877891 | None:intergenic | 35.0% | |
TATGTTGCAAAAGTGAGGTT+TGG | + | chr1_3:5877885-5877904 | Msa0099670:three_prime_UTR | 35.0% | |
! | GGTAAGTGGGTGTTTAGAAT+TGG | - | chr1_3:5872516-5872535 | None:intergenic | 40.0% |
! | TGATGTCTTGATGGGTAAGT+GGG | - | chr1_3:5872529-5872548 | None:intergenic | 40.0% |
TACCTGAGTGATGTCTTGAT+GGG | - | chr1_3:5872537-5872556 | None:intergenic | 40.0% | |
ATACCTGAGTGATGTCTTGA+TGG | - | chr1_3:5872538-5872557 | None:intergenic | 40.0% | |
!!! | GTTTGCTTTTTCCCAATCCA+TGG | + | chr1_3:5872712-5872731 | Msa0099670:intron | 40.0% |
!! | CTTTTTCACATAGAGTTGCC+TGG | - | chr1_3:5872967-5872986 | None:intergenic | 40.0% |
CAGGCAACTCTATGTGAAAA+AGG | + | chr1_3:5872965-5872984 | Msa0099670:intron | 40.0% | |
! | GAAGAAGTTGGTTATGCTTG+TGG | + | chr1_3:5873266-5873285 | Msa0099670:five_prime_UTR | 40.0% |
! | TTTTGTGATACCAAAGGGGT+GGG | + | chr1_3:5873531-5873550 | Msa0099670:five_prime_UTR | 40.0% |
ACTTTCTGTCTTGTCTAGCT+AGG | + | chr1_3:5873560-5873579 | Msa0099670:five_prime_UTR | 40.0% | |
CTTTCTGTCTTGTCTAGCTA+GGG | + | chr1_3:5873561-5873580 | Msa0099670:five_prime_UTR | 40.0% | |
TGTCTAGCTAGGGATTTCAA+TGG | + | chr1_3:5873571-5873590 | Msa0099670:exon | 40.0% | |
!! | AATGGAGGTGTTGTTGTATG+TGG | + | chr1_3:5873589-5873608 | Msa0099670:exon | 40.0% |
!! | GGTGTTGTTGTATGTGGTTA+CGG | + | chr1_3:5873595-5873614 | Msa0099670:CDS | 40.0% |
! | GTTACGGTGTCAATAAGAGT+AGG | + | chr1_3:5873611-5873630 | Msa0099670:CDS | 40.0% |
CTCAATCATAGCTACACACA+TGG | + | chr1_3:5873652-5873671 | Msa0099670:CDS | 40.0% | |
ATCTGCCATCAGCTTAAATC+TGG | - | chr1_3:5873684-5873703 | None:intergenic | 40.0% | |
GGAAACCTTAGCTACAGAAT+TGG | - | chr1_3:5873720-5873739 | None:intergenic | 40.0% | |
GTTTCCAACGAAACTGTTGT+AGG | + | chr1_3:5873734-5873753 | Msa0099670:CDS | 40.0% | |
CAACGAAACTGTTGTAGGTT+CGG | + | chr1_3:5873739-5873758 | Msa0099670:CDS | 40.0% | |
GACGATTGTCATAATAAGGG+TGG | + | chr1_3:5873761-5873780 | Msa0099670:CDS | 40.0% | |
AAAAGTCACTCAACCGGTAT+TGG | + | chr1_3:5873811-5873830 | Msa0099670:CDS | 40.0% | |
TCTCCTTCCTTTACCAATAC+CGG | - | chr1_3:5873827-5873846 | None:intergenic | 40.0% | |
ATCATCATCCTCACTTTCTG+GGG | - | chr1_3:5873915-5873934 | None:intergenic | 40.0% | |
GAATCATCATCCTCACTTTC+TGG | - | chr1_3:5873917-5873936 | None:intergenic | 40.0% | |
CTGATTCAACTCCAATCTCT+GGG | - | chr1_3:5874189-5874208 | None:intergenic | 40.0% | |
TCTGATTCAACTCCAATCTC+TGG | - | chr1_3:5874190-5874209 | None:intergenic | 40.0% | |
!! | TGTCCGGAGTGTTTTTGAAT+TGG | + | chr1_3:5874270-5874289 | Msa0099670:CDS | 40.0% |
TGGGGATTCATATCACTATG+TGG | + | chr1_3:5874307-5874326 | Msa0099670:CDS | 40.0% | |
GAGTACCTGATGGAATAAAC+CGG | + | chr1_3:5874410-5874429 | Msa0099670:CDS | 40.0% | |
!! | AAACACCGGTTTATTCCATC+AGG | - | chr1_3:5874418-5874437 | None:intergenic | 40.0% |
CCAAAGAAATGGGTCATTTG+CGG | - | chr1_3:5874445-5874464 | None:intergenic | 40.0% | |
TTTCCTCGGTCAATGCAATA+TGG | - | chr1_3:5874604-5874623 | None:intergenic | 40.0% | |
GTCAAGGAAAGTCTAATCGA+TGG | + | chr1_3:5874632-5874651 | Msa0099670:CDS | 40.0% | |
AAGGAAAGTCTAATCGATGG+AGG | + | chr1_3:5874635-5874654 | Msa0099670:CDS | 40.0% | |
TATAAGAGCAACAACAGCAG+TGG | - | chr1_3:5874780-5874799 | None:intergenic | 40.0% | |
TTCTTTGCCACGACAAAGAA+CGG | - | chr1_3:5874846-5874865 | None:intergenic | 40.0% | |
GCATATTCATCTTCTCGGTT+CGG | - | chr1_3:5874981-5875000 | None:intergenic | 40.0% | |
TATGCAAGAATTGAAGCAGC+CGG | + | chr1_3:5874996-5875015 | Msa0099670:CDS | 40.0% | |
GGAAAAGTGATACAGTGGAA+TGG | + | chr1_3:5875020-5875039 | Msa0099670:CDS | 40.0% | |
CAAGAACACCAAATACACGA+TGG | - | chr1_3:5875046-5875065 | None:intergenic | 40.0% | |
CCCTGCTAATGTGAAAATCT+AGG | + | chr1_3:5875162-5875181 | Msa0099670:intron | 40.0% | |
! | ATAGGTGTAAGAGGTTGGTT+TGG | + | chr1_3:5875488-5875507 | Msa0099670:intron | 40.0% |
!! | TGTAAGAGGTTGGTTTGGTT+CGG | + | chr1_3:5875493-5875512 | Msa0099670:intron | 40.0% |
GATAAAGACATGTGTCCTAC+GGG | + | chr1_3:5875805-5875824 | Msa0099670:intron | 40.0% | |
! | ACAAACACCTCTAGGAGATT+AGG | - | chr1_3:5875868-5875887 | None:intergenic | 40.0% |
ACAAAGACACAAACACCTCT+AGG | - | chr1_3:5875876-5875895 | None:intergenic | 40.0% | |
! | GAGGTGTTTGTGTCTTTGTT+TGG | + | chr1_3:5875877-5875896 | Msa0099670:intron | 40.0% |
GACTTCCGAAATTAGTACAC+AGG | - | chr1_3:5876046-5876065 | None:intergenic | 40.0% | |
TTGGATTTCGTGAATGTGAG+GGG | + | chr1_3:5876233-5876252 | Msa0099670:intron | 40.0% | |
! | GGAACATAAAGTGATTTGCG+GGG | - | chr1_3:5876267-5876286 | None:intergenic | 40.0% |
! | GGGAACATAAAGTGATTTGC+GGG | - | chr1_3:5876268-5876287 | None:intergenic | 40.0% |
AGACCAAAGATCATTGCAGA+AGG | + | chr1_3:5876549-5876568 | Msa0099670:intron | 40.0% | |
TTGCCTTCTGCAATGATCTT+TGG | - | chr1_3:5876555-5876574 | None:intergenic | 40.0% | |
TAATTTCCCTTAGCAGCCTT+TGG | - | chr1_3:5876638-5876657 | None:intergenic | 40.0% | |
GGATACTGTATGAAAAGAGG+GGG | - | chr1_3:5876680-5876699 | None:intergenic | 40.0% | |
!! | CACCATTCTGAATTTGCTAG+TGG | + | chr1_3:5876839-5876858 | Msa0099670:intron | 40.0% |
GTACCTTCTACTCGTAATTG+CGG | + | chr1_3:5876867-5876886 | Msa0099670:intron | 40.0% | |
TACCTTCTACTCGTAATTGC+GGG | + | chr1_3:5876868-5876887 | Msa0099670:intron | 40.0% | |
GTCTCCTGAAAATCACATCA+AGG | - | chr1_3:5877125-5877144 | None:intergenic | 40.0% | |
TCTGGATCCGGAATAATTGA+CGG | - | chr1_3:5877160-5877179 | None:intergenic | 40.0% | |
CGAGGAATGAATTGAACTTC+TGG | - | chr1_3:5877178-5877197 | None:intergenic | 40.0% | |
!!! | TGTCTCATTTTGGCTAGTGA+TGG | + | chr1_3:5877214-5877233 | Msa0099670:CDS | 40.0% |
!! | TTTTGGCTAGTGATGGTCTA+TGG | + | chr1_3:5877221-5877240 | Msa0099670:CDS | 40.0% |
TTTGGCTAGTGATGGTCTAT+GGG | + | chr1_3:5877222-5877241 | Msa0099670:CDS | 40.0% | |
TTGGTACAAGAAAAACGGCA+TGG | + | chr1_3:5877297-5877316 | Msa0099670:CDS | 40.0% | |
TGTTGTCTTTGCTTCCTTTC+TGG | - | chr1_3:5877399-5877418 | None:intergenic | 40.0% | |
CAACATCACTGTGATTGTTG+TGG | + | chr1_3:5877414-5877433 | Msa0099670:CDS | 40.0% | |
AATCCAATGCACTACAGTGA+AGG | - | chr1_3:5877622-5877641 | None:intergenic | 40.0% | |
TATTATGCCTCCGAGTACAA+AGG | + | chr1_3:5877730-5877749 | Msa0099670:three_prime_UTR | 40.0% | |
! | GTGATGTCTTGATGGGTAAG+TGG | - | chr1_3:5872530-5872549 | None:intergenic | 45.0% |
TACCCATCAAGACATCACTC+AGG | + | chr1_3:5872532-5872551 | Msa0099670:five_prime_UTR | 45.0% | |
TTTCCCAATCCATGGGTTTC+AGG | + | chr1_3:5872720-5872739 | Msa0099670:intron | 45.0% | |
ACACCTGAAACCCATGGATT+GGG | - | chr1_3:5872726-5872745 | None:intergenic | 45.0% | |
ACATTGACACCTGAAACCCA+TGG | - | chr1_3:5872732-5872751 | None:intergenic | 45.0% | |
GGAGAGTTGTGAGAAGAAGT+TGG | + | chr1_3:5873254-5873273 | Msa0099670:five_prime_UTR | 45.0% | |
TTGTCCTATAGGGTCTCCTT+AGG | + | chr1_3:5873428-5873447 | Msa0099670:five_prime_UTR | 45.0% | |
CATTCCTAAGGAGACCCTAT+AGG | - | chr1_3:5873435-5873454 | None:intergenic | 45.0% | |
CTATAGGGTCTCCTTAGGAA+TGG | + | chr1_3:5873433-5873452 | Msa0099670:five_prime_UTR | 45.0% | |
! | GTTTTGTGATACCAAAGGGG+TGG | + | chr1_3:5873530-5873549 | Msa0099670:five_prime_UTR | 45.0% |
CTAGCTAGGGATTTCAATGG+AGG | + | chr1_3:5873574-5873593 | Msa0099670:exon | 45.0% | |
TTTAAGCTGATGGCAGATGC+AGG | + | chr1_3:5873686-5873705 | Msa0099670:CDS | 45.0% | |
TTAAGCTGATGGCAGATGCA+GGG | + | chr1_3:5873687-5873706 | Msa0099670:CDS | 45.0% | |
CGAACCTACAACAGTTTCGT+TGG | - | chr1_3:5873741-5873760 | None:intergenic | 45.0% | |
!! | CACTCAACCGGTATTGGTAA+AGG | + | chr1_3:5873817-5873836 | Msa0099670:CDS | 45.0% |
!! | CAACCGGTATTGGTAAAGGA+AGG | + | chr1_3:5873821-5873840 | Msa0099670:CDS | 45.0% |
GGAAGGAGAAAGTCCTTTGA+TGG | + | chr1_3:5873838-5873857 | Msa0099670:CDS | 45.0% | |
ATTTGACTCCCCCAAATCAG+CGG | - | chr1_3:5874116-5874135 | None:intergenic | 45.0% | |
TATGAATGAACCCCTTGCTG+TGG | + | chr1_3:5874150-5874169 | Msa0099670:CDS | 45.0% | |
AAGATTCACTGCCACAGCAA+GGG | - | chr1_3:5874164-5874183 | None:intergenic | 45.0% | |
GTGAATCTTGACCCAGAGAT+TGG | + | chr1_3:5874175-5874194 | Msa0099670:CDS | 45.0% | |
GAGCAACTGTAGAAGGCTTT+AGG | - | chr1_3:5874213-5874232 | None:intergenic | 45.0% | |
AGCTGATGAGCAACTGTAGA+AGG | - | chr1_3:5874220-5874239 | None:intergenic | 45.0% | |
GAACGAGTGTAACAGTTGTC+CGG | + | chr1_3:5874254-5874273 | Msa0099670:CDS | 45.0% | |
ATGTGGACGAAGACCAGAAA+TGG | + | chr1_3:5874324-5874343 | Msa0099670:CDS | 45.0% | |
! | ATTGGTGATCGAGTACCTGA+TGG | + | chr1_3:5874400-5874419 | Msa0099670:CDS | 45.0% |
TCATTTGCGGCCTAAAACAC+CGG | - | chr1_3:5874432-5874451 | None:intergenic | 45.0% | |
CCGCAAATGACCCATTTCTT+TGG | + | chr1_3:5874442-5874461 | Msa0099670:CDS | 45.0% | |
! | TTTGGAGTCTATGATGGCCA+TGG | + | chr1_3:5874460-5874479 | Msa0099670:CDS | 45.0% |
! | CATCCATATTGCATTGACCG+AGG | + | chr1_3:5874598-5874617 | Msa0099670:CDS | 45.0% |
ATCGATGGAGGTCTCAAAGA+TGG | + | chr1_3:5874647-5874666 | Msa0099670:CDS | 45.0% | |
AAGATGGTTGCCAAGATCAG+TGG | + | chr1_3:5874663-5874682 | Msa0099670:CDS | 45.0% | |
!! | AAGGTTGATGCAGAAGTTGG+AGG | + | chr1_3:5874713-5874732 | Msa0099670:CDS | 45.0% |
TTGTCGTGGCAAAGAACCAA+TGG | + | chr1_3:5874850-5874869 | Msa0099670:CDS | 45.0% | |
AGAACCAATGGCGTTATCAG+TGG | + | chr1_3:5874862-5874881 | Msa0099670:CDS | 45.0% | |
!! | CCACTGTATCACTTTTCCTC+CGG | - | chr1_3:5875018-5875037 | None:intergenic | 45.0% |
TGGAATGGCCATCGTGTATT+TGG | + | chr1_3:5875035-5875054 | Msa0099670:CDS | 45.0% | |
!!! | GTTGGTTTGGTTCGGTTTTG+AGG | + | chr1_3:5875501-5875520 | Msa0099670:intron | 45.0% |
! | ACATAAAGTGATTTGCGGGG+TGG | - | chr1_3:5876264-5876283 | None:intergenic | 45.0% |
CCGAGAAGAATGCCTACAAA+GGG | - | chr1_3:5876417-5876436 | None:intergenic | 45.0% | |
CCCTTTGTAGGCATTCTTCT+CGG | + | chr1_3:5876414-5876433 | Msa0099670:intron | 45.0% | |
ACCGAGAAGAATGCCTACAA+AGG | - | chr1_3:5876418-5876437 | None:intergenic | 45.0% | |
TGCGGGACAACATTGAGATT+TGG | + | chr1_3:5876885-5876904 | Msa0099670:intron | 45.0% | |
GCGGGACAACATTGAGATTT+GGG | + | chr1_3:5876886-5876905 | Msa0099670:intron | 45.0% | |
ATTCATTCCTCGTGCGAAAG+AGG | + | chr1_3:5877186-5877205 | Msa0099670:CDS | 45.0% | |
GGATGTGATGACAAACGAAG+AGG | + | chr1_3:5877243-5877262 | Msa0099670:CDS | 45.0% | |
! | AAACGAAGAGGTGTGTGATC+TGG | + | chr1_3:5877255-5877274 | Msa0099670:CDS | 45.0% |
TCTCCTTCACTGTAGTGCAT+TGG | + | chr1_3:5877616-5877635 | Msa0099670:three_prime_UTR | 45.0% | |
!!! | TCTATTTTATTTTATTTATA+AGG | + | chr1_3:5872670-5872689 | Msa0099670:intron | 5.0% |
!!! | ATTTTTATACTATTAAAATA+AGG | + | chr1_3:5875669-5875688 | Msa0099670:intron | 5.0% |
GACACCTGAAACCCATGGAT+TGG | - | chr1_3:5872727-5872746 | None:intergenic | 50.0% | |
TTTGTCAACGGTGTAGGGTC+TGG | - | chr1_3:5872804-5872823 | None:intergenic | 50.0% | |
TGATGTGTTGCCTCAGATCC+AGG | + | chr1_3:5872946-5872965 | Msa0099670:intron | 50.0% | |
CATAGAGTTGCCTGGATCTG+AGG | - | chr1_3:5872959-5872978 | None:intergenic | 50.0% | |
AAGTTAACCTCCCACCCCTT+TGG | - | chr1_3:5873544-5873563 | None:intergenic | 50.0% | |
! | ACGATTAGCCCCAGAAAGTG+AGG | + | chr1_3:5873904-5873923 | Msa0099670:CDS | 50.0% |
! | TGTTGCTCACACCGCTGATT+TGG | + | chr1_3:5874102-5874121 | Msa0099670:CDS | 50.0% |
!! | GTTGCTCACACCGCTGATTT+GGG | + | chr1_3:5874103-5874122 | Msa0099670:CDS | 50.0% |
!! | TTGCTCACACCGCTGATTTG+GGG | + | chr1_3:5874104-5874123 | Msa0099670:CDS | 50.0% |
AGATTCACTGCCACAGCAAG+GGG | - | chr1_3:5874163-5874182 | None:intergenic | 50.0% | |
CAAGATTCACTGCCACAGCA+AGG | - | chr1_3:5874165-5874184 | None:intergenic | 50.0% | |
GCAACTGCGTCTTCCATTTC+TGG | - | chr1_3:5874340-5874359 | None:intergenic | 50.0% | |
ACGCAGTTGCAACTGTTCCT+CGG | + | chr1_3:5874350-5874369 | Msa0099670:CDS | 50.0% | |
AGTTTACCTGAGAGCCACCA+TGG | - | chr1_3:5874480-5874499 | None:intergenic | 50.0% | |
GTTGTTGCGCCAGAAACTGT+TGG | + | chr1_3:5874752-5874771 | Msa0099670:CDS | 50.0% | |
! | TGGTCCACTGATAACGCCAT+TGG | - | chr1_3:5874869-5874888 | None:intergenic | 50.0% |
CCGGAGGAAAAGTGATACAG+TGG | + | chr1_3:5875015-5875034 | Msa0099670:CDS | 50.0% | |
AGACACGCCTAATCTCCTAG+AGG | + | chr1_3:5875858-5875877 | Msa0099670:intron | 50.0% | |
ATTCCTCGGAGTCAGTCCAA+AGG | + | chr1_3:5876619-5876638 | Msa0099670:intron | 50.0% | |
AGTCAGTCCAAAGGCTGCTA+AGG | + | chr1_3:5876628-5876647 | Msa0099670:intron | 50.0% | |
GTCAGTCCAAAGGCTGCTAA+GGG | + | chr1_3:5876629-5876648 | Msa0099670:intron | 50.0% | |
! | GTATGAAAAGAGGGGGCACA+AGG | - | chr1_3:5876673-5876692 | None:intergenic | 50.0% |
GTCCCGCAATTACGAGTAGA+AGG | - | chr1_3:5876873-5876892 | None:intergenic | 50.0% | |
CATTCATCCTCTTTCGCACG+AGG | - | chr1_3:5877196-5877215 | None:intergenic | 50.0% | |
AAACGGCATGGAACTACCCT+CGG | + | chr1_3:5877309-5877328 | Msa0099670:CDS | 50.0% | |
CATGGAACTACCCTCGGAAA+GGG | + | chr1_3:5877315-5877334 | Msa0099670:CDS | 50.0% | |
ATGGAACTACCCTCGGAAAG+GGG | + | chr1_3:5877316-5877335 | Msa0099670:CDS | 50.0% | |
AGTACAGAGGATGAATGCCC+TGG | - | chr1_3:5877560-5877579 | None:intergenic | 50.0% | |
CCTCACAGAGCCTTTGTACT+CGG | - | chr1_3:5877743-5877762 | None:intergenic | 50.0% | |
TCAACGGTGTAGGGTCTGGT+TGG | - | chr1_3:5872800-5872819 | None:intergenic | 55.0% | |
TGTGATACCAAAGGGGTGGG+AGG | + | chr1_3:5873534-5873553 | Msa0099670:five_prime_UTR | 55.0% | |
!! | TGCTCACACCGCTGATTTGG+GGG | + | chr1_3:5874105-5874124 | Msa0099670:CDS | 55.0% |
AGTTGCTCATCAGCTGCCTC+AGG | + | chr1_3:5874225-5874244 | Msa0099670:CDS | 55.0% | |
TCATCAGCTGCCTCAGGAAG+AGG | + | chr1_3:5874231-5874250 | Msa0099670:CDS | 55.0% | |
CATCAGCTGCCTCAGGAAGA+GGG | + | chr1_3:5874232-5874251 | Msa0099670:CDS | 55.0% | |
ACACTCGTTCCCTCTTCCTG+AGG | - | chr1_3:5874244-5874263 | None:intergenic | 55.0% | |
GGAGTCTATGATGGCCATGG+TGG | + | chr1_3:5874463-5874482 | Msa0099670:CDS | 55.0% | |
GCAGTGGAGCCAACAGTTTC+TGG | - | chr1_3:5874764-5874783 | None:intergenic | 55.0% | |
TCGAGAGCCGTTCTTTGTCG+TGG | + | chr1_3:5874836-5874855 | Msa0099670:CDS | 55.0% | |
GCAAGAATTGAAGCAGCCGG+AGG | + | chr1_3:5874999-5875018 | Msa0099670:CDS | 55.0% | |
GACATGTGTCCTACGGGTGT+CGG | + | chr1_3:5875811-5875830 | Msa0099670:intron | 55.0% | |
GTCGGACACCAAACGTGTGT+CGG | + | chr1_3:5875829-5875848 | Msa0099670:intron | 55.0% | |
CTCTGTGTCCGACACACGTT+TGG | - | chr1_3:5875840-5875859 | None:intergenic | 55.0% | |
GCATGGAACTACCCTCGGAA+AGG | + | chr1_3:5877314-5877333 | Msa0099670:CDS | 55.0% | |
TCGAATCGCGCTCTCCAGAA+AGG | + | chr1_3:5877382-5877401 | Msa0099670:CDS | 55.0% | |
CACAGAGCCTTTGTACTCGG+AGG | - | chr1_3:5877740-5877759 | None:intergenic | 55.0% | |
CCGAGTACAAAGGCTCTGTG+AGG | + | chr1_3:5877740-5877759 | Msa0099670:three_prime_UTR | 55.0% | |
TGATGGCCATGGTGGCTCTC+AGG | + | chr1_3:5874471-5874490 | Msa0099670:CDS | 60.0% | |
CAGGGTCAACGTGTCCGTGT+TGG | - | chr1_3:5875147-5875166 | None:intergenic | 60.0% | |
!! | GTTTGGTGTCCGACACCCGT+AGG | - | chr1_3:5875823-5875842 | None:intergenic | 60.0% |
! | CAGCCTTTGGACTGACTCCG+AGG | - | chr1_3:5876625-5876644 | None:intergenic | 60.0% |
ACTACCCTCGGAAAGGGGAG+AGG | + | chr1_3:5877321-5877340 | Msa0099670:CDS | 60.0% | |
CTACCCTCGGAAAGGGGAGA+GGG | + | chr1_3:5877322-5877341 | Msa0099670:CDS | 60.0% | |
CTACCCTCTCCCCTTTCCGA+GGG | - | chr1_3:5877328-5877347 | None:intergenic | 60.0% | |
ACTACCCTCTCCCCTTTCCG+AGG | - | chr1_3:5877329-5877348 | None:intergenic | 60.0% | |
! | TCTGCTGCTGCTTGTGCTGC+AGG | - | chr1_3:5877355-5877374 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 5872508 | 5877914 | 5872508 | ID=Msa0099670;Name=Msa0099670 |
chr1_3 | mRNA | 5872508 | 5877914 | 5872508 | ID=Msa0099670-mRNA-1;Parent=Msa0099670;Name=Msa0099670-mRNA-1;_AED=0.07;_eAED=0.07;_QI=517|1|1|1|0.6|0.5|6|440|553 |
chr1_3 | exon | 5872508 | 5872561 | 5872508 | ID=Msa0099670-mRNA-1:exon:2238;Parent=Msa0099670-mRNA-1 |
chr1_3 | exon | 5872750 | 5872832 | 5872750 | ID=Msa0099670-mRNA-1:exon:2239;Parent=Msa0099670-mRNA-1 |
chr1_3 | exon | 5873210 | 5874492 | 5873210 | ID=Msa0099670-mRNA-1:exon:2240;Parent=Msa0099670-mRNA-1 |
chr1_3 | exon | 5874575 | 5874892 | 5874575 | ID=Msa0099670-mRNA-1:exon:2241;Parent=Msa0099670-mRNA-1 |
chr1_3 | exon | 5874978 | 5875083 | 5874978 | ID=Msa0099670-mRNA-1:exon:2242;Parent=Msa0099670-mRNA-1 |
chr1_3 | exon | 5877140 | 5877914 | 5877140 | ID=Msa0099670-mRNA-1:exon:2243;Parent=Msa0099670-mRNA-1 |
chr1_3 | five_prime_UTR | 5872508 | 5872561 | 5872508 | ID=Msa0099670-mRNA-1:five_prime_utr;Parent=Msa0099670-mRNA-1 |
chr1_3 | five_prime_UTR | 5872750 | 5872832 | 5872750 | ID=Msa0099670-mRNA-1:five_prime_utr;Parent=Msa0099670-mRNA-1 |
chr1_3 | five_prime_UTR | 5873210 | 5873589 | 5873210 | ID=Msa0099670-mRNA-1:five_prime_utr;Parent=Msa0099670-mRNA-1 |
chr1_3 | CDS | 5873590 | 5874492 | 5873590 | ID=Msa0099670-mRNA-1:cds;Parent=Msa0099670-mRNA-1 |
chr1_3 | CDS | 5874575 | 5874892 | 5874575 | ID=Msa0099670-mRNA-1:cds;Parent=Msa0099670-mRNA-1 |
chr1_3 | CDS | 5874978 | 5875083 | 5874978 | ID=Msa0099670-mRNA-1:cds;Parent=Msa0099670-mRNA-1 |
chr1_3 | CDS | 5877140 | 5877474 | 5877140 | ID=Msa0099670-mRNA-1:cds;Parent=Msa0099670-mRNA-1 |
chr1_3 | three_prime_UTR | 5877475 | 5877914 | 5877475 | ID=Msa0099670-mRNA-1:three_prime_utr;Parent=Msa0099670-mRNA-1 |
Gene Sequence |
Protein sequence |