AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1012570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012570 MtrunA17_Chr7g0223961 92.549 255 8 1 1 244 194 448 4.42e-175 489
Msa1012570 MtrunA17_Chr4g0043511 52.030 271 101 6 1 243 233 502 7.70e-93 283
Msa1012570 MtrunA17_Chr3g0144531 45.385 260 116 4 2 242 200 452 7.42e-75 234
Msa1012570 MtrunA17_Chr4g0034901 45.525 257 124 5 2 242 201 457 1.41e-73 231
Msa1012570 MtrunA17_Chr1g0146831 62.319 138 51 1 1 137 203 340 2.15e-56 184
Msa1012570 MtrunA17_Chr5g0439251 40.377 265 131 7 1 238 196 460 2.61e-56 186
Msa1012570 MtrunA17_Chr1g0177171 37.143 280 138 6 1 242 209 488 1.31e-55 185
Msa1012570 MtrunA17_Chr6g0487261 40.234 256 139 6 1 242 197 452 1.49e-55 185
Msa1012570 MtrunA17_Chr8g0389741 38.340 253 145 4 1 242 198 450 2.54e-54 182
Msa1012570 MtrunA17_Chr3g0110371 37.698 252 145 6 1 242 194 443 7.17e-51 172
Msa1012570 MtrunA17_Chr1g0161011 39.130 253 142 6 1 243 194 444 8.48e-51 172
Msa1012570 MtrunA17_Chr4g0075031 35.714 252 152 5 1 243 215 465 7.32e-47 162
Msa1012570 MtrunA17_Chr5g0434591 34.921 252 152 6 1 242 193 442 1.03e-45 159
Msa1012570 MtrunA17_Chr3g0121271 33.865 251 155 6 1 242 196 444 9.74e-45 156
Msa1012570 MtrunA17_Chr8g0378621 34.524 252 156 4 1 243 196 447 4.93e-44 154
Msa1012570 MtrunA17_Chr1g0155001 50.000 142 65 2 2 137 196 337 2.35e-40 143
Msa1012570 MtrunA17_Chr1g0189111 48.951 143 67 4 1 138 201 342 4.37e-39 140
Msa1012570 MtrunA17_Chr4g0026321 47.183 142 70 2 2 138 200 341 4.17e-37 134
Msa1012570 MtrunA17_Chr4g0043851 48.227 141 68 2 2 137 203 343 8.85e-37 133
Msa1012570 MtrunA17_Chr7g0234821 36.015 261 149 8 1 243 197 457 2.19e-36 133
Msa1012570 MtrunA17_Chr8g0339191 33.074 257 157 8 2 243 201 457 1.95e-34 128
Msa1012570 MtrunA17_Chr3g0119541 43.636 165 88 2 1 160 197 361 1.96e-34 126
Msa1012570 MtrunA17_Chr2g0285901 45.390 141 72 3 2 137 194 334 3.89e-33 124
Msa1012570 MtrunA17_Chr7g0250301 43.662 142 72 5 1 138 175 312 4.86e-33 122
Msa1012570 MtrunA17_Chr2g0321511 41.958 143 78 3 1 138 197 339 6.44e-33 123
Msa1012570 MtrunA17_Chr4g0046311 31.008 258 153 8 2 238 198 451 1.08e-32 124
Msa1012570 MtrunA17_Chr4g0064021 43.262 141 75 3 2 137 198 338 2.66e-32 121
Msa1012570 MtrunA17_Chr4g0039021 44.203 138 66 4 1 134 151 281 3.40e-32 119
Msa1012570 MtrunA17_Chr4g0062771 33.074 257 147 12 2 243 209 455 5.98e-32 122
Msa1012570 MtrunA17_Chr4g0038941 44.681 141 69 4 1 139 219 352 9.27e-32 119
Msa1012570 MtrunA17_Chr4g0003281 43.262 141 75 3 2 137 212 352 4.40e-31 118
Msa1012570 MtrunA17_Chr2g0306311 32.941 255 149 11 2 242 233 479 2.94e-30 117
Msa1012570 MtrunA17_Chr4g0039011 41.259 143 71 5 1 139 210 343 1.03e-29 114
Msa1012570 MtrunA17_Chr6g0461601 36.087 230 111 12 33 242 238 451 4.94e-28 111
Msa1012570 MtrunA17_Chr7g0253091 35.769 260 134 14 2 242 203 448 9.34e-28 110
Msa1012570 MtrunA17_Chr4g0038981 44.056 143 66 7 1 139 191 323 1.56e-27 107
Msa1012570 MtrunA17_Chr4g0076581 31.674 221 132 9 35 243 242 455 1.03e-26 107
Msa1012570 MtrunA17_Chr1g0174261 44.286 140 67 6 1 135 142 275 1.86e-26 105
Msa1012570 MtrunA17_Chr3g0129341 31.496 254 155 12 1 242 207 453 3.02e-26 106
Msa1012570 MtrunA17_Chr2g0290821 32.110 218 132 8 35 243 239 449 3.15e-26 106
Msa1012570 MtrunA17_Chr1g0154991 46.000 100 51 1 143 242 5 101 4.30e-26 98.2
Msa1012570 MtrunA17_Chr4g0038961 42.657 143 68 5 1 139 191 323 4.85e-26 103
Msa1012570 MtrunA17_Chr4g0038971 41.259 143 70 6 1 139 191 323 2.96e-25 101
Msa1012570 MtrunA17_Chr4g0039071 41.007 139 73 5 1 135 195 328 6.48e-25 101
Msa1012570 MtrunA17_Chr1g0148391 32.677 254 149 12 2 242 202 446 6.90e-25 102
Msa1012570 MtrunA17_Chr3g0138741 31.193 218 135 8 35 243 242 453 1.33e-23 98.6
Msa1012570 MtrunA17_Chr4g0069801 30.986 213 134 9 33 238 237 443 2.96e-23 97.8
Msa1012570 MtrunA17_Chr8g0378361 48.193 83 43 0 160 242 29 111 3.51e-22 90.1
Msa1012570 MtrunA17_Chr2g0294601 42.446 139 69 7 1 135 231 362 9.57e-22 92.8
Msa1012570 MtrunA17_Chr8g0383311 28.627 255 161 12 1 242 218 464 1.30e-21 93.2
Msa1012570 MtrunA17_Chr8g0378381 44.048 84 47 0 160 243 31 114 2.09e-20 83.6
Msa1012570 MtrunA17_Chr2g0294591 42.754 138 66 8 3 135 204 333 2.38e-20 88.6
Msa1012570 MtrunA17_Chr3g0105981 31.557 244 128 14 2 226 204 427 2.54e-20 89.0
Msa1012570 MtrunA17_Chr8g0378401 44.444 81 45 0 160 240 31 111 1.67e-19 81.3
Msa1012570 MtrunA17_Chr5g0436361 38.889 144 79 4 1 139 208 347 5.99e-19 84.7
Msa1012570 MtrunA17_Chr2g0313891 45.783 83 44 1 160 242 29 110 1.76e-18 78.2
Msa1012570 MtrunA17_Chr5g0443331 39.496 119 65 4 131 243 73 190 3.76e-18 81.3
Msa1012570 MtrunA17_Chr4g0040911 41.176 85 49 1 161 244 37 121 6.58e-17 75.9
Msa1012570 MtrunA17_Chr3g0120401 36.782 87 55 0 156 242 152 238 9.90e-17 77.0
Msa1012570 MtrunA17_Chr8g0378371 43.373 83 44 1 160 242 32 111 2.15e-16 72.8
Msa1012570 MtrunA17_Chr4g0061401 35.870 92 58 1 151 242 14 104 2.21e-16 75.5
Msa1012570 MtrunA17_Chr3g0096451 38.393 112 65 4 134 243 85 194 6.43e-16 74.7
Msa1012570 MtrunA17_Chr4g0018771 41.379 87 47 2 49 135 86 168 9.41e-15 70.9
Msa1012570 MtrunA17_Chr4g0018861 43.373 83 43 2 53 135 88 166 3.00e-14 69.7
Msa1012570 MtrunA17_Chr1g0213651 36.364 88 56 0 156 243 271 358 3.85e-14 70.9
Msa1012570 MtrunA17_Chr1g0193131 41.772 79 45 1 160 238 419 496 8.33e-14 70.5
Msa1012570 MtrunA17_Chr8g0381081 36.905 84 52 1 160 242 56 139 9.20e-14 67.4
Msa1012570 MtrunA17_Chr7g0250321 40.000 95 50 4 1 91 195 286 2.56e-13 68.2
Msa1012570 MtrunA17_Chr2g0304061 38.095 84 51 1 161 244 158 240 3.47e-13 67.8
Msa1012570 MtrunA17_Chr7g0271411 39.759 83 48 2 161 242 160 241 1.22e-12 66.2
Msa1012570 MtrunA17_Chr5g0401301 35.398 113 57 4 134 243 314 413 4.65e-12 65.1
Msa1012570 MtrunA17_Chr5g0447651 29.167 96 67 1 149 243 18 113 2.63e-11 59.3
Msa1012570 MtrunA17_Chr2g0294581 40.659 91 47 5 46 135 190 274 2.98e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012570 AT3G55430.1 56.746 252 96 6 1 243 201 448 5.69e-91 275
Msa1012570 AT5G24318.3 50.980 255 111 4 1 243 63 315 2.36e-87 262
Msa1012570 AT5G24318.1 50.980 255 111 4 1 243 202 454 4.80e-86 263
Msa1012570 AT2G39640.1 52.000 250 108 5 1 244 199 442 4.63e-85 263
Msa1012570 AT2G39640.1 47.674 86 45 0 159 244 458 543 2.56e-24 101
Msa1012570 AT5G24318.2 50.593 253 111 4 1 241 202 452 4.43e-84 258
Msa1012570 AT4G34480.3 47.177 248 124 3 2 242 87 334 4.27e-77 238
Msa1012570 AT2G16230.1 46.614 251 124 3 2 242 197 447 6.85e-77 241
Msa1012570 AT4G34480.1 47.177 248 124 3 2 242 198 445 9.03e-76 238
Msa1012570 AT4G26830.1 41.016 256 138 5 1 243 195 450 1.02e-60 197
Msa1012570 AT4G26830.2 41.016 256 138 5 1 243 199 454 1.16e-60 197
Msa1012570 AT5G55180.1 40.927 259 136 6 1 243 198 455 6.69e-60 196
Msa1012570 AT5G55180.2 41.732 254 133 6 1 239 198 451 7.78e-59 193
Msa1012570 AT2G05790.1 39.706 272 135 6 1 243 196 467 3.82e-57 189
Msa1012570 AT5G24318.4 58.993 139 56 1 1 138 202 340 2.62e-54 179
Msa1012570 AT3G46570.1 58.571 140 55 3 1 138 200 338 8.44e-52 172
Msa1012570 AT2G01630.1 36.111 252 149 6 1 242 193 442 1.37e-48 167
Msa1012570 AT2G01630.3 36.948 249 143 7 1 238 193 438 3.36e-48 165
Msa1012570 AT1G66250.1 35.857 251 150 6 1 242 202 450 1.26e-46 162
Msa1012570 AT3G13560.4 34.524 252 152 6 1 242 196 444 1.80e-46 161
Msa1012570 AT3G13560.1 34.524 252 152 6 1 242 196 444 1.80e-46 161
Msa1012570 AT3G13560.2 34.524 252 152 6 1 242 196 444 1.80e-46 161
Msa1012570 AT3G13560.5 34.524 252 152 6 1 242 196 444 1.80e-46 161
Msa1012570 AT3G13560.3 34.524 252 152 6 1 242 196 444 1.80e-46 161
Msa1012570 AT4G29360.2 33.213 277 150 5 1 242 207 483 2.19e-46 162
Msa1012570 AT4G29360.1 33.213 277 150 5 1 242 197 473 2.21e-46 162
Msa1012570 AT1G11820.2 34.661 251 154 4 1 242 214 463 2.76e-46 161
Msa1012570 AT5G56590.1 35.686 255 151 5 1 242 197 451 4.52e-46 160
Msa1012570 AT1G11820.3 34.413 247 152 4 1 238 214 459 4.54e-44 154
Msa1012570 AT4G34480.2 51.773 141 63 2 2 137 198 338 8.79e-44 151
Msa1012570 AT5G42720.1 52.482 141 62 2 2 137 199 339 1.01e-42 150
Msa1012570 AT1G30080.2 50.360 139 64 3 2 135 207 345 1.13e-38 138
Msa1012570 AT4G14080.1 33.846 260 153 8 2 243 214 472 1.52e-38 140
Msa1012570 AT1G30080.1 50.360 139 64 3 2 135 207 345 1.74e-38 138
Msa1012570 AT3G23770.1 34.100 261 153 7 1 243 211 470 1.21e-37 137
Msa1012570 AT1G32860.1 47.887 142 67 4 1 135 199 340 9.83e-37 134
Msa1012570 AT2G27500.3 45.455 143 73 3 1 138 122 264 7.53e-36 129
Msa1012570 AT2G27500.2 45.455 143 73 3 1 138 200 342 1.09e-35 130
Msa1012570 AT3G15800.1 45.324 139 71 2 2 135 216 354 1.19e-35 130
Msa1012570 AT2G27500.1 45.455 143 73 3 1 138 200 342 2.25e-35 130
Msa1012570 AT2G26600.2 43.165 139 74 3 2 135 112 250 1.04e-33 123
Msa1012570 AT2G01630.2 36.181 199 115 6 1 189 193 389 2.18e-33 124
Msa1012570 AT3G24330.1 34.749 259 141 13 2 243 216 463 2.50e-33 126
Msa1012570 AT2G26600.1 43.165 139 74 3 2 135 206 344 8.35e-33 123
Msa1012570 AT5G42100.2 45.890 146 71 5 1 138 197 342 9.96e-32 120
Msa1012570 AT5G42100.1 45.890 146 71 5 1 138 197 342 1.71e-31 120
Msa1012570 AT4G18340.2 44.681 141 73 3 2 137 205 345 9.75e-31 117
Msa1012570 AT4G18340.1 44.681 141 73 3 2 137 205 345 1.14e-30 117
Msa1012570 AT5G20870.1 37.220 223 120 11 33 243 244 458 1.28e-30 119
Msa1012570 AT3G07320.1 32.950 261 153 10 2 243 197 454 2.38e-29 114
Msa1012570 AT5G18220.1 31.274 259 150 12 2 242 205 453 1.18e-27 110
Msa1012570 AT5G64790.1 32.719 217 131 9 35 242 239 449 1.20e-27 110
Msa1012570 AT1G64760.1 34.749 259 137 15 2 242 202 446 3.08e-27 109
Msa1012570 AT1G64760.2 34.749 259 137 15 2 242 202 446 3.08e-27 109
Msa1012570 AT1G11820.1 37.671 146 83 2 1 138 214 359 5.15e-27 107
Msa1012570 AT4G17180.1 31.390 223 127 8 35 243 229 439 2.47e-26 106
Msa1012570 AT5G58480.1 31.765 255 145 11 2 243 205 443 2.62e-26 106
Msa1012570 AT2G19440.2 34.615 260 136 15 2 242 198 442 5.46e-26 105
Msa1012570 AT2G19440.1 34.615 260 136 15 2 242 198 442 5.46e-26 105
Msa1012570 AT3G57270.1 39.583 144 77 5 1 139 196 334 1.14e-25 103
Msa1012570 AT5G20330.1 41.958 143 75 6 1 138 201 340 1.96e-25 102
Msa1012570 AT3G57260.1 41.727 139 71 5 1 135 197 329 2.12e-25 102
Msa1012570 AT3G57260.2 41.727 139 71 5 1 135 213 345 2.51e-25 102
Msa1012570 AT4G16260.2 43.056 144 72 6 1 139 162 300 2.54e-25 101
Msa1012570 AT4G09462.1 53.012 83 39 0 160 242 28 110 3.37e-25 96.3
Msa1012570 AT5G20390.1 42.657 143 74 6 1 138 200 339 3.50e-25 102
Msa1012570 AT4G16260.1 43.056 144 72 6 1 139 191 329 3.84e-25 101
Msa1012570 AT4G09465.1 51.807 83 40 0 160 242 30 112 1.62e-24 94.7
Msa1012570 AT4G09090.1 52.439 82 39 0 161 242 31 112 1.86e-24 94.4
Msa1012570 AT4G09464.1 51.807 83 40 0 160 242 30 112 1.98e-24 94.4
Msa1012570 AT4G09467.1 51.807 83 40 0 160 242 30 112 1.98e-24 94.4
Msa1012570 AT3G04010.1 33.636 220 126 11 35 242 244 455 2.75e-24 100
Msa1012570 AT5G58090.1 30.888 259 150 12 2 243 198 444 3.58e-24 100
Msa1012570 AT3G57240.1 38.776 147 79 6 1 142 198 338 4.72e-24 99.0
Msa1012570 AT4G09466.1 51.807 83 40 0 160 242 30 112 7.82e-24 92.8
Msa1012570 AT1G77780.1 40.845 142 77 5 1 138 190 328 1.14e-23 98.2
Msa1012570 AT5G20340.1 40.288 139 76 5 1 135 210 345 1.45e-23 97.8
Msa1012570 AT5G63225.1 51.220 82 40 0 161 242 25 106 1.64e-23 91.7
Msa1012570 AT2G43670.1 44.681 94 51 1 149 242 23 115 1.87e-23 92.0
Msa1012570 AT3G61810.1 38.621 145 66 5 1 132 225 359 2.12e-23 97.4
Msa1012570 AT5G63230.1 48.315 89 46 0 154 242 19 107 1.28e-22 89.4
Msa1012570 AT1G78520.1 48.352 91 46 1 152 242 23 112 2.40e-22 89.0
Msa1012570 AT4G31140.1 28.968 252 162 12 2 243 203 447 1.03e-21 93.6
Msa1012570 AT1G33220.1 42.063 126 67 4 1 122 201 324 3.67e-21 90.9
Msa1012570 AT5G20560.1 39.416 137 76 5 2 134 203 336 7.98e-21 90.1
Msa1012570 AT5G63250.1 48.276 87 42 1 159 242 40 126 2.28e-20 84.3
Msa1012570 AT5G63240.1 45.977 87 44 1 159 242 38 124 2.75e-20 84.0
Msa1012570 AT4G13600.1 42.683 82 47 0 161 242 61 142 9.23e-20 85.1
Msa1012570 AT1G66855.1 43.529 85 47 1 160 243 25 109 1.32e-19 81.6
Msa1012570 AT1G66870.2 33.077 130 81 3 119 242 6 135 1.05e-18 80.1
Msa1012570 AT5G53610.1 43.373 83 46 1 161 243 28 109 1.40e-18 79.0
Msa1012570 AT5G53600.1 43.373 83 46 1 160 242 28 109 2.02e-18 78.6
Msa1012570 AT4G16165.1 47.619 84 43 1 160 242 25 108 2.17e-18 78.6
Msa1012570 AT1G66870.1 41.667 84 48 1 160 242 25 108 3.95e-18 77.8
Msa1012570 AT5G67460.1 33.333 120 73 3 126 243 262 376 8.99e-18 82.0
Msa1012570 AT3G55780.1 36.486 148 80 5 1 139 206 348 2.60e-17 80.5
Msa1012570 AT1G77790.1 36.552 145 81 6 1 138 197 337 2.61e-17 80.1
Msa1012570 AT1G18650.1 36.905 84 53 0 159 242 19 102 5.43e-17 76.6
Msa1012570 AT1G18650.2 36.905 84 53 0 159 242 19 102 6.16e-17 75.1
Msa1012570 AT2G43660.2 44.318 88 48 1 156 242 30 117 1.51e-16 73.9
Msa1012570 AT2G43660.1 44.318 88 48 1 156 242 29 116 1.58e-16 73.9
Msa1012570 AT4G05430.3 34.259 108 59 2 147 242 23 130 1.80e-16 75.1
Msa1012570 AT3G28250.1 44.304 79 43 1 161 239 3 80 2.07e-16 73.6
Msa1012570 AT3G58100.1 39.286 84 50 1 161 243 41 124 1.09e-15 73.2
Msa1012570 AT5G67460.2 33.043 115 70 3 126 238 262 371 2.17e-15 75.1
Msa1012570 AT3G58100.2 39.286 84 50 1 161 243 117 200 3.27e-15 73.2
Msa1012570 AT1G66852.1 40.476 84 48 2 160 242 25 107 4.11e-15 69.7
Msa1012570 AT4G05430.2 34.615 104 56 2 147 238 23 126 4.30e-15 70.1
Msa1012570 AT2G29735.1 40.476 84 48 1 161 242 31 114 5.43e-15 69.7
Msa1012570 AT5G61130.1 36.145 83 53 0 160 242 20 102 5.50e-15 71.6
Msa1012570 AT2G30933.1 40.449 89 51 2 156 243 77 164 7.25e-15 72.0
Msa1012570 AT2G30933.2 41.667 84 47 2 156 238 77 159 1.71e-14 69.3
Msa1012570 AT2G30933.3 41.667 84 47 2 156 238 77 159 1.71e-14 69.3
Msa1012570 AT1G09460.1 41.111 90 51 2 153 242 129 216 1.91e-14 72.0
Msa1012570 AT4G05430.1 33.010 103 57 2 152 242 3 105 2.11e-14 68.6
Msa1012570 AT1G79480.2 35.955 89 57 0 155 243 304 392 2.76e-14 72.0
Msa1012570 AT1G79480.1 35.955 89 57 0 155 243 305 393 2.88e-14 72.0
Msa1012570 AT5G08000.2 37.349 83 52 0 160 242 39 121 4.65e-14 69.3
Msa1012570 AT5G08000.1 37.349 83 52 0 160 242 20 102 5.03e-14 68.9
Msa1012570 AT1G29380.1 38.372 86 47 3 161 243 148 230 6.27e-13 67.4
Msa1012570 AT1G29380.3 37.931 87 48 3 161 244 148 231 6.84e-13 67.0
Msa1012570 AT2G04910.2 32.967 91 60 1 155 244 9 99 1.02e-12 63.2
Msa1012570 AT1G29380.4 38.095 84 46 3 161 241 148 228 5.56e-12 63.9
Msa1012570 AT1G29380.2 38.095 84 46 3 161 241 148 228 5.56e-12 63.9
Msa1012570 AT2G42930.1 35.714 84 53 1 156 239 35 117 1.43e-11 60.8

Find 88 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTATTGCTGAGCGTAAT+TGG 0.168297 7_1:-17751329 Msa1012570:CDS
AAACCAATTCGACGCTTTAA+TGG 0.194075 7_1:-17751586 Msa1012570:CDS
AACGCGAAGTTGACATTCTT+TGG 0.213671 7_1:+17751660 None:intergenic
TTTGGATTGTAACCGAAATA+TGG 0.235039 7_1:+17751678 None:intergenic
TTGTAACCGAAATATGGATA+TGG 0.267934 7_1:+17751684 None:intergenic
TCCTATTGCTGAGCGTAATT+GGG 0.268606 7_1:-17751328 Msa1012570:CDS
GCTTTGCTGCCAACAACCTT+AGG 0.275741 7_1:-17749924 Msa1012570:CDS
TCTGAATAGAAGAGGGAAAA+TGG 0.283861 7_1:-17749388 Msa1012570:three_prime_UTR
GTTAACCCATATCCATATTT+CGG 0.303807 7_1:-17751690 Msa1012570:CDS
AACTGTGACTTCTCTAACTC+TGG 0.316592 7_1:-17749844 Msa1012570:CDS
GCCTTCAGTTTGTGATGGTT+GGG 0.317594 7_1:-17751493 Msa1012570:CDS
TGTGTTGATTATTGTATATT+AGG 0.328811 7_1:-17749279 Msa1012570:three_prime_UTR
GGCCTTCAGTTTGTGATGGT+TGG 0.349760 7_1:-17751494 Msa1012570:CDS
TCTCATTAAACAAAGCAAAA+AGG 0.360169 7_1:+17751364 None:intergenic
TTGATCAGGCATTTGGAGTC+AGG 0.360431 7_1:-17751429 Msa1012570:CDS
GTTATAATGGTGAGTTGATC+AGG 0.372158 7_1:-17751443 Msa1012570:CDS
CTTGGTCGTACAGGTGTTAC+TGG 0.375059 7_1:+17750069 None:intergenic
TGCCATGAATGCTTACTATC+AGG 0.376391 7_1:-17749887 Msa1012570:CDS
CGCTGTTTATTCAGCAATGA+AGG 0.376856 7_1:-17751562 Msa1012570:CDS
CGTCCATTAAAGCGTCGAAT+TGG 0.381101 7_1:+17751583 None:intergenic
CTTTGCTGCCAACAACCTTA+GGG 0.387287 7_1:-17749923 Msa1012570:CDS
GCAATGAAGGGACTTGGTTT+CGG 0.391799 7_1:-17751549 Msa1012570:CDS
TGGTGAGTTGATCAGGCATT+TGG 0.396474 7_1:-17751436 Msa1012570:CDS
GCGTTACTTGCATCCGGCTT+CGG 0.400174 7_1:+17750021 None:intergenic
AATGCTTACTATCAGGCTAA+TGG 0.406232 7_1:-17749880 Msa1012570:CDS
AGCCTGATAGTAAGCATTCA+TGG 0.410992 7_1:+17749885 None:intergenic
TTGGTTTGTGTACCTTAGTT+TGG 0.417725 7_1:+17751602 None:intergenic
AGCGTAATTGGGGTCTCTTT+CGG 0.417931 7_1:-17751317 Msa1012570:CDS
GACATTGCTGTTGGCGAAAC+GGG 0.419237 7_1:-17751519 Msa1012570:CDS
AATCTAAGCATGTTTCTTGA+AGG 0.425095 7_1:-17749444 Msa1012570:exon
CGTACAGGTGTTACTGGTCT+TGG 0.428234 7_1:+17750075 None:intergenic
CAAACTCCTCCTGGTTGGAT+TGG 0.434047 7_1:+17749946 None:intergenic
GCACGCCGTTGATGCCAAAC+AGG 0.435927 7_1:-17751401 Msa1012570:CDS
AAAGTCTCAAACCTCCTGTT+TGG 0.438173 7_1:+17751387 None:intergenic
TTGCTGTTGGCGAAACGGGC+TGG 0.445801 7_1:-17751515 Msa1012570:CDS
CCCCAATTACGCTCAGCAAT+AGG 0.446045 7_1:+17751327 None:intergenic
TTTAATCTAATGCTCGTTTG+TGG 0.447652 7_1:-17749217 Msa1012570:three_prime_UTR
GGACATTGCTGTTGGCGAAA+CGG 0.448570 7_1:-17751520 Msa1012570:CDS
CTTAGATTCTACAATTATCA+TGG 0.451268 7_1:+17749459 None:intergenic
ATACCTTGTTTAAATAGAAA+AGG 0.455220 7_1:+17749105 None:intergenic
CTTGGTTGTACCGGTGCTAC+TGG 0.460537 7_1:+17750093 None:intergenic
CAGCTCCCAACTGCAGGCCT+TGG 0.465067 7_1:+17750051 None:intergenic
TATTCAGCAATGAAGGGACT+TGG 0.471139 7_1:-17751555 Msa1012570:CDS
TACGACCAAGGCCTGCAGTT+GGG 0.472326 7_1:-17750056 Msa1012570:CDS
GCGAATGCTCAGAGTTATAA+TGG 0.476931 7_1:-17751456 Msa1012570:CDS
CTTGAAGGTCATAATCAGAA+AGG 0.478799 7_1:-17749429 Msa1012570:three_prime_UTR
TCATAAACAGGAGAGAAATC+AGG 0.484236 7_1:+17751294 None:intergenic
CAAGGCCTGCAGTTGGGAGC+TGG 0.494783 7_1:-17750050 Msa1012570:CDS
AACGCTGCGTTACTTGCATC+CGG 0.496068 7_1:+17750015 None:intergenic
GGCAAGAGCCCTAAGGTTGT+TGG 0.496278 7_1:+17749915 None:intergenic
TCTAAGCATCTGAATAGAAG+AGG 0.499159 7_1:-17749396 Msa1012570:three_prime_UTR
GCAGCAAAGCAAACTCCTCC+TGG 0.502477 7_1:+17749937 None:intergenic
TGTAACCGAAATATGGATAT+GGG 0.509650 7_1:+17751685 None:intergenic
ACACACCAGCTCCCAACTGC+AGG 0.509757 7_1:+17750045 None:intergenic
ACTGCAGGCCTTGGTCGTAC+AGG 0.517721 7_1:+17750060 None:intergenic
GAGCTGGTGTGTGCCGAAGC+CGG 0.520619 7_1:-17750034 Msa1012570:CDS
CAAACCGTGGACTGTTCGAC+AGG 0.528074 7_1:-17751629 Msa1012570:CDS
TCAATATTAACATTAGTATG+TGG 0.536556 7_1:-17749165 Msa1012570:three_prime_UTR
CTGTCGAACAGTCCACGGTT+TGG 0.541850 7_1:+17751630 None:intergenic
GGCTGGCCTTCAGTTTGTGA+TGG 0.548833 7_1:-17751498 Msa1012570:CDS
AGGCATTTGGAGTCAGGGAG+AGG 0.549488 7_1:-17751423 Msa1012570:CDS
CAAAGCAAACTCCTCCTGGT+TGG 0.554000 7_1:+17749941 None:intergenic
AACCTCCTGTTTGGCATCAA+CGG 0.556918 7_1:+17751396 None:intergenic
GTTACTGGTCTTGGTTGTAC+CGG 0.562767 7_1:+17750084 None:intergenic
GGGACTTGGTTTCGGTGACG+TGG 0.563795 7_1:-17751541 Msa1012570:CDS
TGATCAGGCATTTGGAGTCA+GGG 0.570207 7_1:-17751428 Msa1012570:CDS
GAGGGAAAATGGAGTGAATG+TGG 0.575009 7_1:-17749377 Msa1012570:three_prime_UTR
CCTATTGCTGAGCGTAATTG+GGG 0.577981 7_1:-17751327 Msa1012570:CDS
TTAGAGAAGTCACAGTTGAA+AGG 0.580468 7_1:+17749850 None:intergenic
GTACGACCAAGGCCTGCAGT+TGG 0.581574 7_1:-17750057 Msa1012570:CDS
CATAAGTGGCAAGAGCCCTA+AGG 0.586670 7_1:+17749908 None:intergenic
TTTAATGAGAATCAGAAACC+TGG 0.587094 7_1:-17751351 Msa1012570:CDS
GTAAGCATTCATGGCATAAG+TGG 0.588803 7_1:+17749894 None:intergenic
GGTGACGTGGACATTGCTGT+TGG 0.590887 7_1:-17751528 Msa1012570:CDS
CTAAGCATCTGAATAGAAGA+GGG 0.592649 7_1:-17749395 Msa1012570:three_prime_UTR
TCGACAGGTACACCAAACTA+AGG 0.596614 7_1:-17751614 Msa1012570:CDS
TGTACCTGTCGAACAGTCCA+CGG 0.598666 7_1:+17751625 None:intergenic
CGCCGTTGATGCCAAACAGG+AGG 0.599110 7_1:-17751398 Msa1012570:CDS
TTACGCTCAGCAATAGGACC+AGG 0.604625 7_1:+17751333 None:intergenic
GATTGCGGGCCAATCCAACC+AGG 0.613106 7_1:-17749955 Msa1012570:CDS
GCTGTTTATTCAGCAATGAA+GGG 0.625942 7_1:-17751561 Msa1012570:CDS
TCCCAACCATCACAAACTGA+AGG 0.629351 7_1:+17751492 None:intergenic
GATGCAGAGACCAGTAGCAC+CGG 0.642118 7_1:-17750103 Msa1012570:intron
AGGTCATAATCAGAAAGGCA+AGG 0.655826 7_1:-17749424 Msa1012570:three_prime_UTR
CAGTAACACCTGTACGACCA+AGG 0.680264 7_1:-17750068 Msa1012570:CDS
GCGTTATTTAGACCAAACCG+TGG 0.694113 7_1:-17751642 Msa1012570:CDS
TGGTTGGGATGCTTGTAGTG+TGG 0.707938 7_1:-17751478 Msa1012570:CDS
TGCGGGCCAATCCAACCAGG+AGG 0.713788 7_1:-17749952 Msa1012570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTCTTAAAATTTCA+TGG - chr7_1:17749641-17749660 Msa1012570:intron 15.0%
!! AAACTATGAAATTAAAGTAA+AGG + chr7_1:17750226-17750245 None:intergenic 15.0%
!!! GAATAAATGTATTTTGTTTT+TGG + chr7_1:17751682-17751701 None:intergenic 15.0%
!! AATAACAAAATAAGATCATG+AGG - chr7_1:17750009-17750028 Msa1012570:CDS 20.0%
!!! GTTTGGAATTATTTAATTGT+CGG - chr7_1:17750048-17750067 Msa1012570:CDS 20.0%
!!! AATTAAAAAGAAAAGTGCAT+TGG + chr7_1:17750328-17750347 None:intergenic 20.0%
!!! CACTTTTTTTCTATACAATA+AGG - chr7_1:17750382-17750401 Msa1012570:intron 20.0%
!! AATGATAAAACTGTGAAATT+TGG + chr7_1:17750656-17750675 None:intergenic 20.0%
!!! CATTTTATTCAAAATAGAAC+CGG - chr7_1:17751189-17751208 Msa1012570:intron 20.0%
!!! TGTTGTCTTGATTTATTTTT+TGG - chr7_1:17751495-17751514 Msa1012570:CDS 20.0%
!!! TGTGTTGATTATTGTATATT+AGG - chr7_1:17751527-17751546 Msa1012570:CDS 20.0%
!! TCAATATTAACATTAGTATG+TGG - chr7_1:17751641-17751660 Msa1012570:CDS 20.0%
! TCTCATTAAACAAAGCAAAA+AGG + chr7_1:17749445-17749464 None:intergenic 25.0%
! ATTGTCTTAAAATTTCATGG+AGG - chr7_1:17749644-17749663 Msa1012570:intron 25.0%
! AATCAAAACATCAACAACAA+CGG + chr7_1:17749900-17749919 None:intergenic 25.0%
! TTTAGACCTCAAAATATCAT+TGG + chr7_1:17750101-17750120 None:intergenic 25.0%
!! TCTAAAGTGTCATTATAACA+TGG - chr7_1:17750115-17750134 Msa1012570:intron 25.0%
! TTTGTTTGTACTACAATATC+TGG - chr7_1:17750261-17750280 Msa1012570:intron 25.0%
! TTAAACTAGAGACGTATTTA+CGG - chr7_1:17750465-17750484 Msa1012570:intron 25.0%
!! GACGATTGATATAAATTTTG+AGG + chr7_1:17750534-17750553 None:intergenic 25.0%
! TTATCACTATAGGCATAATA+CGG + chr7_1:17750561-17750580 None:intergenic 25.0%
! ACTAGTAAAGAACATAACAA+GGG + chr7_1:17751029-17751048 None:intergenic 25.0%
!!! CGGTTCTATTTTGAATAAAA+TGG + chr7_1:17751191-17751210 None:intergenic 25.0%
!!! GTTTTGTTATTCTTATTTGC+AGG - chr7_1:17751324-17751343 Msa1012570:CDS 25.0%
! CTTAGATTCTACAATTATCA+TGG + chr7_1:17751350-17751369 None:intergenic 25.0%
!!! TGTCTTGATTTATTTTTTGG+AGG - chr7_1:17751498-17751517 Msa1012570:CDS 25.0%
!!! GTCTTGATTTATTTTTTGGA+GGG - chr7_1:17751499-17751518 Msa1012570:CDS 25.0%
!!! TCTTGATTTATTTTTTGGAG+GGG - chr7_1:17751500-17751519 Msa1012570:CDS 25.0%
! AGGTAAAAAGATGTTAACAT+TGG - chr7_1:17751547-17751566 Msa1012570:CDS 25.0%
GTTAACCCATATCCATATTT+CGG - chr7_1:17749116-17749135 Msa1012570:three_prime_UTR 30.0%
TGTAACCGAAATATGGATAT+GGG + chr7_1:17749124-17749143 None:intergenic 30.0%
TTGTAACCGAAATATGGATA+TGG + chr7_1:17749125-17749144 None:intergenic 30.0%
TTTGGATTGTAACCGAAATA+TGG + chr7_1:17749131-17749150 None:intergenic 30.0%
TTTAATGAGAATCAGAAACC+TGG - chr7_1:17749455-17749474 Msa1012570:exon 30.0%
!! AACGCAAACTTCTATTTCTA+TGG + chr7_1:17749682-17749701 None:intergenic 30.0%
GTGCATGTTCAATAAAAACA+AGG + chr7_1:17749809-17749828 None:intergenic 30.0%
! CTTACAAAAGTACAGATTCA+CGG + chr7_1:17749870-17749889 None:intergenic 30.0%
!! GCATTGATTAGATTCATGTT+TGG - chr7_1:17750031-17750050 Msa1012570:CDS 30.0%
! AGAGTTCCAATGATATTTTG+AGG - chr7_1:17750092-17750111 Msa1012570:CDS 30.0%
TATCACTATAGGCATAATAC+GGG + chr7_1:17750560-17750579 None:intergenic 30.0%
TGACATGGAATTATCACTAT+AGG + chr7_1:17750571-17750590 None:intergenic 30.0%
AAACTGTGAAATTTGGATCT+TGG + chr7_1:17750649-17750668 None:intergenic 30.0%
TAAAGAACATAACAAGGGTA+TGG + chr7_1:17751024-17751043 None:intergenic 30.0%
CACTAGTAAAGAACATAACA+AGG + chr7_1:17751030-17751049 None:intergenic 30.0%
CTTCAGATTGAATATATGTC+TGG - chr7_1:17751102-17751121 Msa1012570:intron 30.0%
ATTGAATATATGTCTGGTGT+TGG - chr7_1:17751108-17751127 Msa1012570:intron 30.0%
AATCTAAGCATGTTTCTTGA+AGG - chr7_1:17751362-17751381 Msa1012570:CDS 30.0%
TTTAATCTAATGCTCGTTTG+TGG - chr7_1:17751589-17751608 Msa1012570:CDS 30.0%
!! TTGGTTTGTGTACCTTAGTT+TGG + chr7_1:17749207-17749226 None:intergenic 35.0%
AAACCAATTCGACGCTTTAA+TGG - chr7_1:17749220-17749239 Msa1012570:three_prime_UTR 35.0%
GCTGTTTATTCAGCAATGAA+GGG - chr7_1:17749245-17749264 Msa1012570:three_prime_UTR 35.0%
!! GTTATAATGGTGAGTTGATC+AGG - chr7_1:17749363-17749382 Msa1012570:three_prime_UTR 35.0%
TCATAAACAGGAGAGAAATC+AGG + chr7_1:17749515-17749534 None:intergenic 35.0%
AAGATTCCAGAGTCATAAAC+AGG + chr7_1:17749527-17749546 None:intergenic 35.0%
TATCAGACATAGCAACAGAA+AGG + chr7_1:17749705-17749724 None:intergenic 35.0%
!! CCTAGTTTTTACTACCGAAA+CGG + chr7_1:17749843-17749862 None:intergenic 35.0%
TTTCGGTAGTAAAAACTAGG+AGG - chr7_1:17749843-17749862 Msa1012570:CDS 35.0%
! CGTGAATCTGTACTTTTGTA+AGG - chr7_1:17749868-17749887 Msa1012570:CDS 35.0%
!! TTACCAGTATTGATCCACAA+CGG - chr7_1:17749923-17749942 Msa1012570:CDS 35.0%
TACTACAATATCTGGATTCC+TGG - chr7_1:17750269-17750288 Msa1012570:intron 35.0%
! CTCTTTTATCACATGGAACA+TGG - chr7_1:17750293-17750312 Msa1012570:intron 35.0%
!! CTAGTTTAATTTCTAGTGCG+CGG + chr7_1:17750454-17750473 None:intergenic 35.0%
CATGTCAACGACGATAATAA+GGG - chr7_1:17750584-17750603 Msa1012570:intron 35.0%
AATGCTTACTATCAGGCTAA+TGG - chr7_1:17750926-17750945 Msa1012570:intron 35.0%
TTAGAGAAGTCACAGTTGAA+AGG + chr7_1:17750959-17750978 None:intergenic 35.0%
CTTGAAGGTCATAATCAGAA+AGG - chr7_1:17751377-17751396 Msa1012570:CDS 35.0%
TCTAAGCATCTGAATAGAAG+AGG - chr7_1:17751410-17751429 Msa1012570:CDS 35.0%
CTAAGCATCTGAATAGAAGA+GGG - chr7_1:17751411-17751430 Msa1012570:CDS 35.0%
TCTGAATAGAAGAGGGAAAA+TGG - chr7_1:17751418-17751437 Msa1012570:CDS 35.0%
AACGCGAAGTTGACATTCTT+TGG + chr7_1:17749149-17749168 None:intergenic 40.0%
CGCTGTTTATTCAGCAATGA+AGG - chr7_1:17749244-17749263 Msa1012570:three_prime_UTR 40.0%
TATTCAGCAATGAAGGGACT+TGG - chr7_1:17749251-17749270 Msa1012570:three_prime_UTR 40.0%
GCGAATGCTCAGAGTTATAA+TGG - chr7_1:17749350-17749369 Msa1012570:three_prime_UTR 40.0%
AAAGTCTCAAACCTCCTGTT+TGG + chr7_1:17749422-17749441 None:intergenic 40.0%
TCCTATTGCTGAGCGTAATT+GGG - chr7_1:17749478-17749497 Msa1012570:intron 40.0%
TTCTCTCCTGTTTATGACTC+TGG - chr7_1:17749518-17749537 Msa1012570:intron 40.0%
AATTTCATGGAGGACCAATG+TGG - chr7_1:17749654-17749673 Msa1012570:intron 40.0%
ATTTCATGGAGGACCAATGT+GGG - chr7_1:17749655-17749674 Msa1012570:intron 40.0%
!! CTATTTCTATGGACCCACAT+TGG + chr7_1:17749671-17749690 None:intergenic 40.0%
GCTATGTCTGATACATGATC+TGG - chr7_1:17749712-17749731 Msa1012570:intron 40.0%
CACCAATTTGATCACCGTTT+CGG - chr7_1:17749826-17749845 Msa1012570:CDS 40.0%
TACCGAAACGGTGATCAAAT+TGG + chr7_1:17749831-17749850 None:intergenic 40.0%
CCGTTTCGGTAGTAAAAACT+AGG - chr7_1:17749840-17749859 Msa1012570:CDS 40.0%
!! TACCAGTATTGATCCACAAC+GGG - chr7_1:17749924-17749943 Msa1012570:CDS 40.0%
! TCCTGGTCTCTTTTATCACA+TGG - chr7_1:17750286-17750305 Msa1012570:intron 40.0%
TCCATGTGATAAAAGAGACC+AGG + chr7_1:17750290-17750309 None:intergenic 40.0%
ATTTACGGAGTAGCTAGCAA+TGG - chr7_1:17750480-17750499 Msa1012570:intron 40.0%
CCTTATTATCGTCGTTGACA+TGG + chr7_1:17750586-17750605 None:intergenic 40.0%
CCATGTCAACGACGATAATA+AGG - chr7_1:17750583-17750602 Msa1012570:intron 40.0%
! TGCAGCCAAAAAGTTGATTG+CGG - chr7_1:17750836-17750855 Msa1012570:intron 40.0%
GTAAGCATTCATGGCATAAG+TGG + chr7_1:17750915-17750934 None:intergenic 40.0%
TGCCATGAATGCTTACTATC+AGG - chr7_1:17750919-17750938 Msa1012570:intron 40.0%
AGCCTGATAGTAAGCATTCA+TGG + chr7_1:17750924-17750943 None:intergenic 40.0%
AACTGTGACTTCTCTAACTC+TGG - chr7_1:17750962-17750981 Msa1012570:intron 40.0%
GTATGGAAATGAGACTCACT+TGG + chr7_1:17751007-17751026 None:intergenic 40.0%
TGTAATCTCATGTGCAACGA+TGG + chr7_1:17751158-17751177 None:intergenic 40.0%
AGGTCATAATCAGAAAGGCA+AGG - chr7_1:17751382-17751401 Msa1012570:CDS 40.0%
GCGTTATTTAGACCAAACCG+TGG - chr7_1:17749164-17749183 Msa1012570:three_prime_UTR 45.0%
TCGACAGGTACACCAAACTA+AGG - chr7_1:17749192-17749211 Msa1012570:three_prime_UTR 45.0%
!! CGTCCATTAAAGCGTCGAAT+TGG + chr7_1:17749226-17749245 None:intergenic 45.0%
! GCAATGAAGGGACTTGGTTT+CGG - chr7_1:17749257-17749276 Msa1012570:three_prime_UTR 45.0%
GCCTTCAGTTTGTGATGGTT+GGG - chr7_1:17749313-17749332 Msa1012570:three_prime_UTR 45.0%
TCCCAACCATCACAAACTGA+AGG + chr7_1:17749317-17749336 None:intergenic 45.0%
!! TGGTGAGTTGATCAGGCATT+TGG - chr7_1:17749370-17749389 Msa1012570:three_prime_UTR 45.0%
! TTGATCAGGCATTTGGAGTC+AGG - chr7_1:17749377-17749396 Msa1012570:three_prime_UTR 45.0%
! TGATCAGGCATTTGGAGTCA+GGG - chr7_1:17749378-17749397 Msa1012570:three_prime_UTR 45.0%
AACCTCCTGTTTGGCATCAA+CGG + chr7_1:17749413-17749432 None:intergenic 45.0%
GTCCTATTGCTGAGCGTAAT+TGG - chr7_1:17749477-17749496 Msa1012570:intron 45.0%
CCTATTGCTGAGCGTAATTG+GGG - chr7_1:17749479-17749498 Msa1012570:intron 45.0%
AGCGTAATTGGGGTCTCTTT+CGG - chr7_1:17749489-17749508 Msa1012570:intron 45.0%
TGATCTGGCTAGTGTCAGTT+TGG - chr7_1:17749727-17749746 Msa1012570:intron 45.0%
!! TATGGCGGACTTCTTGACAA+TGG + chr7_1:17749950-17749969 None:intergenic 45.0%
ATTGTCAAGAAGTCCGCCAT+AGG - chr7_1:17749949-17749968 Msa1012570:CDS 45.0%
!! GTTACTGGTCTTGGTTGTAC+CGG + chr7_1:17750725-17750744 None:intergenic 45.0%
! GCAGCCAAAAAGTTGATTGC+GGG - chr7_1:17750837-17750856 Msa1012570:intron 45.0%
! TTGGCCCGCAATCAACTTTT+TGG + chr7_1:17750844-17750863 None:intergenic 45.0%
CTTTGCTGCCAACAACCTTA+GGG - chr7_1:17750883-17750902 Msa1012570:intron 45.0%
! AATAGAACCGGTGTCAACGA+TGG - chr7_1:17751201-17751220 Msa1012570:intron 45.0%
ATGCTAACGCGTGTTACAAG+AGG - chr7_1:17751234-17751253 Msa1012570:intron 45.0%
TGCTAACGCGTGTTACAAGA+GGG - chr7_1:17751235-17751254 Msa1012570:intron 45.0%
GAGGGAAAATGGAGTGAATG+TGG - chr7_1:17751429-17751448 Msa1012570:CDS 45.0%
!!! TTTTCTTTTTAATTTTTTTA+AGG - chr7_1:17750334-17750353 Msa1012570:intron 5.0%
TGTACCTGTCGAACAGTCCA+CGG + chr7_1:17749184-17749203 None:intergenic 50.0%
! GGACATTGCTGTTGGCGAAA+CGG - chr7_1:17749286-17749305 Msa1012570:three_prime_UTR 50.0%
! GACATTGCTGTTGGCGAAAC+GGG - chr7_1:17749287-17749306 Msa1012570:three_prime_UTR 50.0%
GGCCTTCAGTTTGTGATGGT+TGG - chr7_1:17749312-17749331 Msa1012570:three_prime_UTR 50.0%
TGGTTGGGATGCTTGTAGTG+TGG - chr7_1:17749328-17749347 Msa1012570:three_prime_UTR 50.0%
TTACGCTCAGCAATAGGACC+AGG + chr7_1:17749476-17749495 None:intergenic 50.0%
CCCCAATTACGCTCAGCAAT+AGG + chr7_1:17749482-17749501 None:intergenic 50.0%
TGGAATCTTGCGCAATGCAC+AGG - chr7_1:17749538-17749557 Msa1012570:intron 50.0%
TTCTTGACAATGGCCCGTTG+TGG + chr7_1:17749940-17749959 None:intergenic 50.0%
CGCTTTAGCAAGTCCTATGG+CGG + chr7_1:17749965-17749984 None:intergenic 50.0%
ACGCGCTTTAGCAAGTCCTA+TGG + chr7_1:17749968-17749987 None:intergenic 50.0%
ACGGAGTAGCTAGCAATGGT+TGG - chr7_1:17750484-17750503 Msa1012570:intron 50.0%
!! CGTACAGGTGTTACTGGTCT+TGG + chr7_1:17750734-17750753 None:intergenic 50.0%
! CTTGGTCGTACAGGTGTTAC+TGG + chr7_1:17750740-17750759 None:intergenic 50.0%
CAGTAACACCTGTACGACCA+AGG - chr7_1:17750738-17750757 Msa1012570:intron 50.0%
AACGCTGCGTTACTTGCATC+CGG + chr7_1:17750794-17750813 None:intergenic 50.0%
CAAACTCCTCCTGGTTGGAT+TGG + chr7_1:17750863-17750882 None:intergenic 50.0%
CAAAGCAAACTCCTCCTGGT+TGG + chr7_1:17750868-17750887 None:intergenic 50.0%
GCTTTGCTGCCAACAACCTT+AGG - chr7_1:17750882-17750901 Msa1012570:intron 50.0%
CATAAGTGGCAAGAGCCCTA+AGG + chr7_1:17750901-17750920 None:intergenic 50.0%
ACACTGACCATCGTTGACAC+CGG + chr7_1:17751211-17751230 None:intergenic 50.0%
CTGTCGAACAGTCCACGGTT+TGG + chr7_1:17749179-17749198 None:intergenic 55.0%
! CAAACCGTGGACTGTTCGAC+AGG - chr7_1:17749177-17749196 Msa1012570:three_prime_UTR 55.0%
GGTGACGTGGACATTGCTGT+TGG - chr7_1:17749278-17749297 Msa1012570:three_prime_UTR 55.0%
!! GGCTGGCCTTCAGTTTGTGA+TGG - chr7_1:17749308-17749327 Msa1012570:three_prime_UTR 55.0%
! AGGCATTTGGAGTCAGGGAG+AGG - chr7_1:17749383-17749402 Msa1012570:three_prime_UTR 55.0%
GGCCCGTTGTGGATCAATAC+TGG + chr7_1:17749929-17749948 None:intergenic 55.0%
GATGCAGAGACCAGTAGCAC+CGG - chr7_1:17750703-17750722 Msa1012570:intron 55.0%
!! CTTGGTTGTACCGGTGCTAC+TGG + chr7_1:17750716-17750735 None:intergenic 55.0%
TACGACCAAGGCCTGCAGTT+GGG - chr7_1:17750750-17750769 Msa1012570:intron 55.0%
GCGTTACTTGCATCCGGCTT+CGG + chr7_1:17750788-17750807 None:intergenic 55.0%
GCAGCAAAGCAAACTCCTCC+TGG + chr7_1:17750872-17750891 None:intergenic 55.0%
GGCAAGAGCCCTAAGGTTGT+TGG + chr7_1:17750894-17750913 None:intergenic 55.0%
! GGGACTTGGTTTCGGTGACG+TGG - chr7_1:17749265-17749284 Msa1012570:three_prime_UTR 60.0%
! TTGCTGTTGGCGAAACGGGC+TGG - chr7_1:17749291-17749310 Msa1012570:three_prime_UTR 60.0%
GCACGCCGTTGATGCCAAAC+AGG - chr7_1:17749405-17749424 Msa1012570:three_prime_UTR 60.0%
CGCCGTTGATGCCAAACAGG+AGG - chr7_1:17749408-17749427 Msa1012570:three_prime_UTR 60.0%
ACTGCAGGCCTTGGTCGTAC+AGG + chr7_1:17750749-17750768 None:intergenic 60.0%
GTACGACCAAGGCCTGCAGT+TGG - chr7_1:17750749-17750768 Msa1012570:intron 60.0%
ACACACCAGCTCCCAACTGC+AGG + chr7_1:17750764-17750783 None:intergenic 60.0%
GATTGCGGGCCAATCCAACC+AGG - chr7_1:17750851-17750870 Msa1012570:intron 60.0%
CAGCTCCCAACTGCAGGCCT+TGG + chr7_1:17750758-17750777 None:intergenic 65.0%
CAAGGCCTGCAGTTGGGAGC+TGG - chr7_1:17750756-17750775 Msa1012570:intron 65.0%
GAGCTGGTGTGTGCCGAAGC+CGG - chr7_1:17750772-17750791 Msa1012570:intron 65.0%
TGCGGGCCAATCCAACCAGG+AGG - chr7_1:17750854-17750873 Msa1012570:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 17749113 17751715 17749113 ID=Msa1012570;Name=Msa1012570
chr7_1 mRNA 17749113 17751715 17749113 ID=Msa1012570-mRNA-1;Parent=Msa1012570;Name=Msa1012570-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.5|0.66|1|0.5|0.66|3|347|244
chr7_1 exon 17749113 17749482 17749113 ID=Msa1012570-mRNA-1:exon:4491;Parent=Msa1012570-mRNA-1
chr7_1 exon 17749821 17750118 17749821 ID=Msa1012570-mRNA-1:exon:4490;Parent=Msa1012570-mRNA-1
chr7_1 exon 17751302 17751715 17751302 ID=Msa1012570-mRNA-1:exon:4489;Parent=Msa1012570-mRNA-1
chr7_1 CDS 17751302 17751715 17751302 ID=Msa1012570-mRNA-1:cds;Parent=Msa1012570-mRNA-1
chr7_1 CDS 17749821 17750118 17749821 ID=Msa1012570-mRNA-1:cds;Parent=Msa1012570-mRNA-1
chr7_1 CDS 17749460 17749482 17749460 ID=Msa1012570-mRNA-1:cds;Parent=Msa1012570-mRNA-1
chr7_1 three_prime_UTR 17749113 17749459 17749113 ID=Msa1012570-mRNA-1:three_prime_utr;Parent=Msa1012570-mRNA-1
Gene Sequence

>Msa1012570

ATGGTTAACCCATATCCATATTTCGGTTACAATCCAAAGAATGTCAACTTCGCGTTATTTAGACCAAACCGTGGACTGTTCGACAGGTACACCAAACTAAGGTACACAAACCAATTCGACGCTTTAATGGACGCTGTTTATTCAGCAATGAAGGGACTTGGTTTCGGTGACGTGGACATTGCTGTTGGCGAAACGGGCTGGCCTTCAGTTTGTGATGGTTGGGATGCTTGTAGTGTGGCGAATGCTCAGAGTTATAATGGTGAGTTGATCAGGCATTTGGAGTCAGGGAGAGGCACGCCGTTGATGCCAAACAGGAGGTTTGAGACTTTCCTTTTTGCTTTGTTTAATGAGAATCAGAAACCTGGTCCTATTGCTGAGCGTAATTGGGGTCTCTTTCGGCCTGATTTCTCTCCTAGACCAGTAGCACCGGTACAACCAAGACCAGTAACACCTGTACGACCAAGGCCTGCAGTTGGGAGCTGGTGTGTGCCGAAGCCGGATGCAAGTAACGCAGCGTTACAAGCGAATATAAACTATGTTTGCAGCCAAAAAGTTGATTGCGGGCCAATCCAACCAGGAGGAGTTTGCTTTGCTGCCAACAACCTTAGGGCTCTTGCCACTTATGCCATGAATGCTTACTATCAGGCTAATGGAAGACATCCTTTCAACTGTGACTTCTCTAACTCTGGTGTTATTGTTTCTACTAATCCAAGCCATGATAATTGTAGAATCTAA
Protein sequence

>Msa1012570

MVNPYPYFGYNPKNVNFALFRPNRGLFDRYTKLRYTNQFDALMDAVYSAMKGLGFGDVDIAVGETGWPSVCDGWDACSVANAQSYNGELIRHLESGRGTPLMPNRRFETFLFALFNENQKPGPIAERNWGLFRPDFSPRPVAPVQPRPVTPVRPRPAVGSWCVPKPDASNAALQANINYVCSQKVDCGPIQPGGVCFAANNLRALATYAMNAYYQANGRHPFNCDFSNSGVIVSTNPSHDNCRI*