AlfalfaGEDB | Msa1158200

M. sativa cultivar zhongmu-4 / Msa1158200

KEGG: K08235
GO: GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009612 GO:0009628 GO:0009642 GO:0009645 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009826 GO:0009987 GO:0010033 GO:0016020 GO:0016043 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0016762 GO:0030054 GO:0030312 GO:0032502 GO:0032989 GO:0040007 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0060560 GO:0071840 GO:0071944
PFAM: PF00722.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158200	XP_003624550.1	98.976	293	3	0	1	293	1	293	0.0	610

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158200	sp\|Q8LNZ5\|XTHB_PHAAN	84.983	293	44	0	1	293	1	293	0.0	548

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158200	Q2HRU5	98.976	293	3	0	1	293	1	293	0.0	610

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037180	Msa1158200	0.802365	5.808357e-49	-8.615850e-47
Msa0044160	Msa1158200	0.800856	1.184602e-48	-8.615850e-47
Msa0044780	Msa1158200	-0.828202	1.025152e-54	-8.615850e-47
Msa0045810	Msa1158200	0.817030	4.073977e-52	-8.615850e-47
Msa0077560	Msa1158200	0.827104	1.881022e-54	-8.615850e-47
Msa0610700	Msa1158200	-0.859438	4.135120e-63	-8.615850e-47
Msa0662820	Msa1158200	0.852977	3.240041e-61	-8.615850e-47
Msa0693340	Msa1158200	-0.832416	9.570177e-56	-8.615850e-47
Msa0719270	Msa1158200	0.819070	1.408272e-52	-8.615850e-47
Msa0745140	Msa1158200	0.842200	2.989258e-58	-8.615850e-47
Msa0754430	Msa1158200	0.807586	4.702350e-50	-8.615850e-47
Msa0754450	Msa1158200	0.811639	6.332492e-51	-8.615850e-47
Msa0776640	Msa1158200	0.841903	3.582687e-58	-8.615850e-47
Msa0825920	Msa1158200	0.840192	1.008356e-57	-8.615850e-47
Msa0840520	Msa1158200	0.801006	1.103566e-48	-8.615850e-47
Msa0124910	Msa1158200	0.816030	6.823207e-52	-8.615850e-47
Msa0139500	Msa1158200	0.823277	1.510138e-53	-8.615850e-47
Msa0142430	Msa1158200	0.823605	1.266176e-53	-8.615850e-47
Msa0177320	Msa1158200	0.810029	1.411989e-50	-8.615850e-47
Msa0183710	Msa1158200	0.810835	9.458065e-51	-8.615850e-47
Msa0185290	Msa1158200	0.824124	9.565641e-54	-8.615850e-47
Msa0198820	Msa1158200	0.811186	7.938559e-51	-8.615850e-47
Msa0204950	Msa1158200	0.837053	6.520827e-57	-8.615850e-47
Msa0207680	Msa1158200	0.823774	1.155766e-53	-8.615850e-47
Msa0216340	Msa1158200	0.827977	1.160940e-54	-8.615850e-47
Msa0225610	Msa1158200	0.811278	7.584290e-51	-8.615850e-47
Msa0226450	Msa1158200	-0.804775	1.836911e-49	-8.615850e-47
Msa0386880	Msa1158200	0.832103	1.143869e-55	-8.615850e-47
Msa0437480	Msa1158200	0.814305	1.648411e-51	-8.615850e-47
Msa0437520	Msa1158200	0.806567	7.725010e-50	-8.615850e-47
Msa0440350	Msa1158200	0.830033	3.687910e-55	-8.615850e-47
Msa1012570	Msa1158200	0.819146	1.353647e-52	-8.615850e-47
Msa1022420	Msa1158200	0.801338	9.439679e-49	-8.615850e-47
Msa1031170	Msa1158200	0.832230	1.064107e-55	-8.615850e-47
Msa1031180	Msa1158200	0.943303	1.535350e-102	-8.615850e-47
Msa1044250	Msa1158200	0.809460	1.871554e-50	-8.615850e-47
Msa1070360	Msa1158200	0.897959	8.476064e-77	-8.615850e-47
Msa1078940	Msa1158200	0.803458	3.452862e-49	-8.615850e-47
Msa1082410	Msa1158200	0.805680	1.187580e-49	-8.615850e-47
Msa0241610	Msa1158200	0.821443	4.025893e-53	-8.615850e-47
Msa0249850	Msa1158200	0.832326	1.007810e-55	-8.615850e-47
Msa0256540	Msa1158200	0.835786	1.370357e-56	-8.615850e-47
Msa0266460	Msa1158200	0.815543	8.760166e-52	-8.615850e-47
Msa0281470	Msa1158200	0.811195	7.905117e-51	-8.615850e-47
Msa0317870	Msa1158200	0.836184	1.086061e-56	-8.615850e-47
Msa0320600	Msa1158200	0.840335	9.253172e-58	-8.615850e-47
Msa0326710	Msa1158200	0.800142	1.655325e-48	-8.615850e-47
Msa0334320	Msa1158200	0.838561	2.673747e-57	-8.615850e-47
Msa0354840	Msa1158200	0.824697	7.014570e-54	-8.615850e-47
Msa1119430	Msa1158200	0.938618	4.994126e-99	-8.615850e-47
Msa1119440	Msa1158200	0.821365	4.196780e-53	-8.615850e-47
Msa1158200	Msa1158210	0.833171	6.215894e-56	-8.615850e-47
Msa1158200	Msa1169220	0.810716	1.003590e-50	-8.615850e-47
Msa1158200	Msa1190160	0.850066	2.159231e-60	-8.615850e-47
Msa1158200	Msa1190180	0.841780	3.860432e-58	-8.615850e-47
Msa1158200	Msa1257570	0.800508	1.394846e-48	-8.615850e-47
Msa1158200	Msa1258000	0.852227	5.302480e-61	-8.615850e-47
Msa1158200	Msa1275160	0.803089	4.117239e-49	-8.615850e-47
Msa1158200	Msa1316140	0.800433	1.444644e-48	-8.615850e-47
Msa1158200	Msa1365820	0.840000	1.131727e-57	-8.615850e-47
Msa1158200	Msa1368390	0.844489	7.324733e-59	-8.615850e-47
Msa1158200	Msa1375000	-0.815675	8.187439e-52	-8.615850e-47
Msa1158200	Msa1391500	0.828416	9.099181e-55	-8.615850e-47
Msa1158200	Msa1397270	0.812644	3.821071e-51	-8.615850e-47
Msa1158200	Msa1398810	0.828207	1.021876e-54	-8.615850e-47
Msa1158200	Msa1401130	0.808883	2.488034e-50	-8.615850e-47
Msa1158200	Msa1401670	0.853878	1.785700e-61	-8.615850e-47
Msa1158200	Msa1447100	0.810324	1.219612e-50	-8.615850e-47
Msa1158200	Msa1457770	0.833804	4.320071e-56	-8.615850e-47
Msa0519810	Msa1158200	0.801657	8.119800e-49	-8.615850e-47
Msa0519840	Msa1158200	0.801065	1.073418e-48	-8.615850e-47
Msa0574900	Msa1158200	0.819732	9.953371e-53	-8.615850e-47
Msa0576180	Msa1158200	0.800558	1.362495e-48	-8.615850e-47
Msa0579070	Msa1158200	-0.851045	1.145748e-60	-8.615850e-47
Msa0597700	Msa1158200	0.869809	2.344255e-66	-8.615850e-47
Msa0865420	Msa1158200	0.845908	3.028089e-59	-8.615850e-47
Msa0913140	Msa1158200	-0.813071	3.080930e-51	-8.615850e-47
Msa0967780	Msa1158200	0.818354	2.047416e-52	-8.615850e-47
Msa0968360	Msa1158200	0.816063	6.706192e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158200	MtrunA17_Chr7g0252631	98.976	293	3	0	1	293	1	293	0.0	610
Msa1158200	MtrunA17_Chr7g0252621	97.611	293	7	0	1	293	1	293	0.0	602
Msa1158200	MtrunA17_Chr7g0252601	85.666	293	42	0	1	293	1	293	0.0	545
Msa1158200	MtrunA17_Chr6g0461731	81.911	293	53	0	1	293	24	316	0.0	521
Msa1158200	MtrunA17_Chr6g0461761	83.275	287	47	1	8	293	7	293	0.0	515
Msa1158200	MtrunA17_Chr3g0122031	53.082	292	125	3	1	291	1	281	6.97e-104	304
Msa1158200	MtrunA17_Chr3g0122021	52.740	292	126	3	1	291	1	281	9.77e-104	304
Msa1158200	MtrunA17_Chr4g0054431	52.330	279	126	3	10	287	15	287	2.11e-103	303
Msa1158200	MtrunA17_Chr2g0323161	50.172	291	124	4	7	289	11	288	3.45e-103	303
Msa1158200	MtrunA17_Chr4g0054451	54.864	257	114	2	32	287	34	289	1.54e-102	301
Msa1158200	MtrunA17_Chr4g0072611	53.287	289	121	4	3	288	4	281	4.60e-102	300
Msa1158200	MtrunA17_Chr8g0377841	52.817	284	118	5	5	287	13	281	3.35e-101	297
Msa1158200	MtrunA17_Chr4g0023961	49.653	288	125	4	8	287	13	288	1.02e-100	296
Msa1158200	MtrunA17_Chr7g0258911	52.414	290	124	4	1	287	1	279	6.64e-98	289
Msa1158200	MtrunA17_Chr4g0072671	55.303	264	106	3	32	287	26	285	3.17e-97	288
Msa1158200	MtrunA17_Chr1g0206681	48.239	284	143	3	8	287	8	291	1.63e-94	281
Msa1158200	MtrunA17_Chr6g0486581	48.864	264	129	4	28	287	22	283	1.24e-93	278
Msa1158200	MtrunA17_Chr1g0206081	48.621	290	145	2	2	287	5	294	1.89e-93	278
Msa1158200	MtrunA17_Chr4g0071341	52.490	261	115	3	32	287	25	281	2.80e-93	277
Msa1158200	MtrunA17_Chr8g0389641	47.782	293	104	4	1	291	1	246	2.73e-92	273
Msa1158200	MtrunA17_Chr2g0299061	52.075	265	114	3	32	287	26	286	2.57e-91	273
Msa1158200	MtrunA17_Chr4g0072601	46.599	294	139	5	1	287	1	283	1.50e-90	271
Msa1158200	MtrunA17_Chr4g0072681	54.202	238	104	2	57	289	8	245	7.01e-86	257
Msa1158200	MtrunA17_Chr5g0443391	49.378	241	115	3	50	289	46	280	5.26e-81	246
Msa1158200	MtrunA17_Chr3g0096651	47.177	248	118	3	51	293	49	288	2.99e-80	244
Msa1158200	MtrunA17_Chr8g0340001	50.222	225	111	1	63	287	8	231	1.17e-79	241
Msa1158200	MtrunA17_Chr8g0390201	51.282	195	91	3	97	287	15	209	1.68e-68	212
Msa1158200	MtrunA17_Chr2g0303861	42.545	275	149	7	8	277	1	271	5.30e-66	207
Msa1158200	MtrunA17_Chr2g0303721	40.636	283	151	7	7	288	5	271	3.02e-64	203
Msa1158200	MtrunA17_Chr7g0235541	47.907	215	100	5	79	288	1	208	2.79e-63	198
Msa1158200	MtrunA17_Chr5g0410621	37.546	269	156	5	30	288	40	306	6.14e-60	194
Msa1158200	MtrunA17_Chr4g0028221	35.762	302	162	8	5	287	16	304	8.38e-60	192
Msa1158200	MtrunA17_Chr8g0365231	34.551	301	174	6	8	288	14	311	4.56e-59	191
Msa1158200	MtrunA17_Chr7g0264731	37.410	278	146	7	31	287	21	291	3.88e-58	188
Msa1158200	MtrunA17_Chr1g0180451	38.545	275	148	8	23	287	31	294	6.79e-58	187
Msa1158200	MtrunA17_Chr1g0161951	38.321	274	158	5	24	290	25	294	2.55e-57	187
Msa1158200	MtrunA17_Chr2g0327411	37.818	275	151	7	23	287	45	309	7.22e-57	185
Msa1158200	MtrunA17_Chr8g0375981	36.177	293	173	6	1	287	6	290	2.74e-56	184
Msa1158200	MtrunA17_Chr8g0382041	36.431	269	154	6	30	287	32	294	3.80e-55	181
Msa1158200	MtrunA17_Chr4g0072641	51.969	127	45	3	162	287	37	148	4.65e-37	129
Msa1158200	MtrunA17_Chr8g0374231	45.545	101	54	1	188	287	1	101	3.05e-25	97.1
Msa1158200	MtrunA17_Chr8g0350711	33.908	174	107	4	54	225	54	221	6.50e-15	72.4
Msa1158200	MtrunA17_Chr8g0390181	44.444	72	38	1	28	99	24	93	5.22e-14	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158200	AT5G13870.2	80.488	287	56	0	7	293	7	293	0.0	508
Msa1158200	AT5G13870.1	80.488	287	56	0	7	293	7	293	0.0	508
Msa1158200	AT5G13870.3	80.488	287	56	0	7	293	7	293	0.0	508
Msa1158200	AT2G06850.1	76.792	293	67	1	1	292	3	295	5.95e-177	490
Msa1158200	AT2G06850.2	80.519	231	45	0	62	292	5	235	2.41e-147	413
Msa1158200	AT5G65730.1	51.590	283	133	3	7	288	12	291	7.96e-106	310
Msa1158200	AT3G23730.1	56.061	264	112	2	32	291	27	290	9.68e-106	310
Msa1158200	AT4G14130.1	57.422	256	104	3	39	291	35	288	5.08e-103	303
Msa1158200	AT4G37800.1	50.704	284	133	3	5	287	12	289	3.75e-102	300
Msa1158200	AT4G03210.1	49.828	291	137	3	5	293	7	290	1.88e-101	299
Msa1158200	AT5G57550.1	50.173	289	137	3	1	288	1	283	1.81e-98	291
Msa1158200	AT5G57560.1	51.220	287	121	4	8	287	7	281	9.17e-98	289
Msa1158200	AT4G30270.1	51.408	284	111	4	5	287	8	265	2.08e-95	283
Msa1158200	AT1G11545.1	50.704	284	130	4	10	287	20	299	4.64e-95	283
Msa1158200	AT5G57530.1	53.516	256	111	4	39	290	34	285	2.62e-94	280
Msa1158200	AT4G25810.1	51.056	284	124	5	10	287	9	283	3.52e-94	280
Msa1158200	AT5G57540.1	52.091	263	118	4	32	290	26	284	2.17e-93	278
Msa1158200	AT4G03210.2	54.978	231	102	1	65	293	32	262	4.38e-93	276
Msa1158200	AT4G13090.1	48.944	284	138	4	8	288	10	289	5.23e-92	275
Msa1158200	AT5G48070.1	53.750	240	105	3	49	287	47	281	1.23e-89	268
Msa1158200	AT2G14620.1	45.775	284	150	3	8	287	11	294	2.28e-88	266
Msa1158200	AT4G28850.1	45.172	290	148	5	7	291	8	291	2.84e-88	265
Msa1158200	AT2G18800.1	48.162	272	122	4	32	287	28	296	4.97e-88	265
Msa1158200	AT4G25820.1	51.575	254	115	3	39	288	37	286	2.18e-87	263
Msa1158200	AT4G13080.1	46.718	259	135	3	30	288	37	292	1.82e-85	258
Msa1158200	AT3G25050.1	47.126	261	131	4	30	287	33	289	2.64e-85	258
Msa1158200	AT4G30290.1	53.097	226	100	3	63	287	56	276	2.44e-82	249
Msa1158200	AT1G65310.1	53.540	226	99	3	63	287	61	281	4.19e-82	249
Msa1158200	AT1G65310.2	53.540	226	99	3	63	287	83	303	5.44e-82	249
Msa1158200	AT4G30280.1	52.655	226	101	3	63	287	61	281	2.03e-81	247
Msa1158200	AT2G14620.2	48.739	238	120	2	52	287	7	244	3.75e-81	246
Msa1158200	AT2G14620.3	51.142	219	105	2	71	287	15	233	3.51e-79	240
Msa1158200	AT3G44990.1	42.264	265	136	7	31	287	38	293	8.81e-62	197
Msa1158200	AT1G32170.1	41.079	241	134	4	54	287	54	293	1.52e-60	196
Msa1158200	AT3G48580.1	39.535	258	140	5	30	287	32	273	1.75e-58	189
Msa1158200	AT1G14720.1	35.862	290	177	5	5	287	3	290	5.33e-58	189
Msa1158200	AT2G36870.1	40.244	246	132	5	52	289	61	299	2.10e-56	184
Msa1158200	AT4G18990.1	38.735	253	134	5	54	287	62	312	8.14e-55	181
Msa1158200	AT2G01850.1	38.430	242	143	3	51	287	50	290	1.13e-53	178
Msa1158200	AT1G10550.1	36.364	253	142	6	51	287	60	309	8.94e-53	175
Msa1158200	AT3G48580.3	38.938	226	123	4	62	287	4	214	8.72e-51	167
Msa1158200	AT3G48580.2	34.496	258	133	6	30	287	32	253	4.39e-43	148
Msa1158200	AT4G18990.2	34.914	232	124	5	81	287	9	238	7.78e-43	148
Msa1158200	AT2G36870.2	44.915	118	57	2	52	161	61	178	3.16e-28	107

Find 81 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAAAATGAGTTCTTCATTT+TGG	0.129453	7_4:-47418591	Msa1158200:exon
ATCTTCATTGGTTGGTTAAA+TGG	0.164613	7_4:+47417335	None:intergenic
TGAAGATATACAACAGTTTA+TGG	0.169467	7_4:-47417319	Msa1158200:CDS
GGCCTAAGACCTTTGGTAAA+AGG	0.211322	7_4:+47418666	None:intergenic
GCCTTGTGTTGCACAGAATT+TGG	0.221522	7_4:+47417181	None:intergenic
CCAAAATGAAGAACTCATTT+TGG	0.248059	7_4:+47418591	None:intergenic
TTCACAGATACTCTATTCTA+TGG	0.260832	7_4:-47417886	Msa1158200:CDS
AAGAACAAAGGATCTTTCTT+TGG	0.288385	7_4:-47417928	Msa1158200:CDS
ATCAGTGCAATAGTTATAAA+TGG	0.324527	7_4:+47417076	None:intergenic
TCACGGTCTCTCTTGCATTC+AGG	0.329347	7_4:+47417029	None:intergenic
TACAAAAGTTTCCACATTGA+TGG	0.366093	7_4:-47417224	Msa1158200:CDS
GCATCAAGATCACGAAATTC+AGG	0.366582	7_4:+47417140	None:intergenic
CTCAATGGCGTAGGCTAAGA+TGG	0.370855	7_4:-47417115	Msa1158200:CDS
CTGCCAAATGGTACATCAAC+TGG	0.374020	7_4:+47418508	None:intergenic
TTTATAACTATTGCACTGAT+AGG	0.375154	7_4:-47417073	Msa1158200:CDS
AAACTGTTGTATATCTTCAT+TGG	0.377706	7_4:+47417323	None:intergenic
GCCTAAGACCTTTGGTAAAA+GGG	0.396106	7_4:+47418667	None:intergenic
TATCTGTGAAACTCCTTTGT+TGG	0.396635	7_4:+47417899	None:intergenic
GATCATATCAAATACTTCAA+TGG	0.398017	7_4:-47418460	Msa1158200:CDS
GTTCAAGAACAGCAAGGACT+TGG	0.401999	7_4:-47417369	Msa1158200:CDS
TTGTAGATGATGTACCAATC+AGG	0.405806	7_4:-47417394	Msa1158200:CDS
TCCAAAGGATCATACTTGTT+TGG	0.409589	7_4:-47418210	Msa1158200:CDS
GGTACATCAACTGGCTTCCT+TGG	0.412450	7_4:+47418517	None:intergenic
ACATTTGTTTGTAAAATGTA+AGG	0.414616	7_4:+47417974	None:intergenic
ACCTGCTATGAATGGTGCTT+TGG	0.418411	7_4:+47417247	None:intergenic
GAGTTCTTGGGGAACAGAAC+AGG	0.419669	7_4:-47418001	Msa1158200:CDS
AGTTAAGTACTTACACAATC+TGG	0.424003	7_4:+47417855	None:intergenic
GTTTATGGAATGCTGATGAT+TGG	0.429689	7_4:-47417304	Msa1158200:CDS
TTGCATTCAGGTGGAATTTG+AGG	0.430863	7_4:+47417041	None:intergenic
GCCAAACAAGTATGATCCTT+TGG	0.434422	7_4:+47418209	None:intergenic
GCTAAGACTTGGGTATATAT+AGG	0.434684	7_4:+47418645	None:intergenic
AAGCCAGTTGATGTACCATT+TGG	0.436123	7_4:-47418511	Msa1158200:CDS
CTGTTCTTGAACACCCTGAT+TGG	0.452101	7_4:+47417380	None:intergenic
ATGAACATAAAGATGGTTCC+TGG	0.454098	7_4:-47418177	Msa1158200:CDS
TTACAAACAAATGTGTTCAC+TGG	0.454841	7_4:-47417965	Msa1158200:CDS
ATATATAGGCCTAAGACCTT+TGG	0.460320	7_4:+47418659	None:intergenic
GGGTAATAGTTTCTGCCAAA+TGG	0.460623	7_4:+47418496	None:intergenic
GCAGAAACTATTACCCAACT+TGG	0.466236	7_4:-47418489	Msa1158200:CDS
TTCAAGTTGTGAAAAGTTTG+TGG	0.473617	7_4:+47418623	None:intergenic
GTGATCTTGATGCTGCTCAA+TGG	0.483264	7_4:-47417130	Msa1158200:CDS
TGTTGTATATCTTCATTGGT+TGG	0.483857	7_4:+47417327	None:intergenic
AAAACTCGATGGAACAATAG+TGG	0.504546	7_4:+47416854	None:intergenic
ATGGTTCCTGGTGATTCAGC+TGG	0.504587	7_4:-47418165	Msa1158200:CDS
ACATCAACTGGCTTCCTTGG+AGG	0.507363	7_4:+47418520	None:intergenic
AAAGTTTGTGGCTAAGACTT+GGG	0.508728	7_4:+47418635	None:intergenic
TTTATGGAATGCTGATGATT+GGG	0.520881	7_4:-47417303	Msa1158200:CDS
TATGATCAAAAGCCCAAGTT+GGG	0.522271	7_4:+47418476	None:intergenic
TGTAGATGATGTACCAATCA+GGG	0.530316	7_4:-47417393	Msa1158200:CDS
CTTCACTCTGTGCTCCTCCA+AGG	0.543749	7_4:-47418534	Msa1158200:CDS
CAGAAACTATTACCCAACTT+GGG	0.544276	7_4:-47418488	Msa1158200:CDS
TCCAAAGCACCATTCATAGC+AGG	0.546523	7_4:-47417248	Msa1158200:CDS
TCTTTATGTTCATACTGAAG+TGG	0.547122	7_4:+47418187	None:intergenic
AAAAGTTTGTGGCTAAGACT+TGG	0.547818	7_4:+47418634	None:intergenic
CTTCAGTATGAACATAAAGA+TGG	0.549292	7_4:-47418184	Msa1158200:CDS
GTGCAACACAAGGCAAAAGA+TGG	0.550413	7_4:-47417172	Msa1158200:CDS
CAACACAAGGCAAAAGATGG+TGG	0.550815	7_4:-47417169	Msa1158200:CDS
AAGTATATAAAGAAAGAGAG+AGG	0.551126	7_4:-47418705	Msa1158200:five_prime_UTR
CGGTCTCTCTTGCATTCAGG+TGG	0.554639	7_4:+47417032	None:intergenic
AATGTGTTCACTGGTGGTCA+AGG	0.560017	7_4:-47417956	Msa1158200:CDS
TCTCAATATACAAAACTCGA+TGG	0.560237	7_4:+47416843	None:intergenic
ATATGATCAAAAGCCCAAGT+TGG	0.560782	7_4:+47418475	None:intergenic
GCCAAATTCTGTGCAACACA+AGG	0.563859	7_4:-47417182	Msa1158200:CDS
TGATGAAAATTTATATGTCA+CGG	0.576058	7_4:+47417012	None:intergenic
TTCAAGAACAGCAAGGACTT+GGG	0.586766	7_4:-47417368	Msa1158200:CDS
CTTCATCTTGATAAGTACAC+TGG	0.589751	7_4:-47418421	Msa1158200:intron
TTGATGCTGCTCAATGGCGT+AGG	0.593657	7_4:-47417124	Msa1158200:CDS
GTGGATTAGAGAAAACAGAT+TGG	0.595136	7_4:-47417271	Msa1158200:CDS
GATGATTGGGCAACAAGAGG+TGG	0.601731	7_4:-47417290	Msa1158200:CDS
AATGATATATGTCTAATACA+AGG	0.607205	7_4:+47416891	None:intergenic
TAAAGAAAGAGAGAGGAACA+TGG	0.611334	7_4:-47418698	Msa1158200:five_prime_UTR
TCAATGGCGTAGGCTAAGAT+GGG	0.614694	7_4:-47417114	Msa1158200:CDS
CAAACAAATGTGTTCACTGG+TGG	0.617357	7_4:-47417962	Msa1158200:CDS
AACACAAGGCAAAAGATGGT+GGG	0.620136	7_4:-47417168	Msa1158200:CDS
TCTTTGGTTTGATCCAACAA+AGG	0.620801	7_4:-47417912	Msa1158200:CDS
CATATCAAATACTTCAATGG+TGG	0.624848	7_4:-47418457	Msa1158200:CDS
AAAGAAAGAGAGAGGAACAT+GGG	0.632149	7_4:-47418697	Msa1158200:five_prime_UTR
GTCAAGGTAACAAAGAACAA+AGG	0.646155	7_4:-47417940	Msa1158200:CDS
ACTGTTCCAGCTGAATCACC+AGG	0.657325	7_4:+47418159	None:intergenic
ATGATTCACAACCATCAATG+TGG	0.677115	7_4:+47417213	None:intergenic
GCTGATGATTGGGCAACAAG+AGG	0.682230	7_4:-47417293	Msa1158200:CDS
CAGGGTGTTCAAGAACAGCA+AGG	0.698366	7_4:-47417375	Msa1158200:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATATATGATACAATATA+TGG	+	chr7_4:47418005-47418024	None:intergenic	10.0%
!!	AAAATAAATAAATTAGTTAC+TGG	+	chr7_4:47418044-47418063	None:intergenic	10.0%
!!!	TGTAATTTTAATTTTACTTT+AGG	-	chr7_4:47418710-47418729	Msa1158200:five_prime_UTR	10.0%
!!	AATATATATGATACAATATA+TGG	+	chr7_4:47418005-47418024	None:intergenic	10.0%
!!	AAAATAAATAAATTAGTTAC+TGG	+	chr7_4:47418044-47418063	None:intergenic	10.0%
!!!	TGTAATTTTAATTTTACTTT+AGG	-	chr7_4:47418710-47418729	Msa1158200:five_prime_UTR	10.0%
!!!	TTTTAATATTTTTTCTTGGA+GGG	+	chr7_4:47416779-47416798	None:intergenic	15.0%
!!!	CTTCTTTTAATATTTTTTCT+TGG	+	chr7_4:47416783-47416802	None:intergenic	15.0%
!!	TTAAGTTATTTATACAAACA+TGG	+	chr7_4:47417155-47417174	None:intergenic	15.0%
!!	TTACTTTATAAATCTAAAAG+AGG	+	chr7_4:47417769-47417788	None:intergenic	15.0%
!!!	TTTTAATATTTTTTCTTGGA+GGG	+	chr7_4:47416779-47416798	None:intergenic	15.0%
!!!	CTTCTTTTAATATTTTTTCT+TGG	+	chr7_4:47416783-47416802	None:intergenic	15.0%
!!	TTAAGTTATTTATACAAACA+TGG	+	chr7_4:47417155-47417174	None:intergenic	15.0%
!!	TTACTTTATAAATCTAAAAG+AGG	+	chr7_4:47417769-47417788	None:intergenic	15.0%
!!!	CTTTTAATATTTTTTCTTGG+AGG	+	chr7_4:47416780-47416799	None:intergenic	20.0%
!!!	TTTCTAACTACTTTTTGTAT+AGG	-	chr7_4:47417267-47417286	Msa1158200:CDS	20.0%
!!	TGTATGTACAAAAACATTTA+AGG	-	chr7_4:47417389-47417408	Msa1158200:CDS	20.0%
!!	ACATTTGTTTGTAAAATGTA+AGG	+	chr7_4:47417542-47417561	None:intergenic	20.0%
!!	ATTCAAGATTGTTAAAGATT+AGG	+	chr7_4:47417705-47417724	None:intergenic	20.0%
!!	TTACACAAAAATAAATCAGT+TGG	+	chr7_4:47418077-47418096	None:intergenic	20.0%
!!!	TTATTTTTGTGTAACTATGA+TGG	-	chr7_4:47418083-47418102	Msa1158200:intron	20.0%
!!!	TATTTTTGTGTAACTATGAT+GGG	-	chr7_4:47418084-47418103	Msa1158200:intron	20.0%
!!!	AGTTATAAATGGTGTATTTT+TGG	+	chr7_4:47418429-47418448	None:intergenic	20.0%
!!	TGATGAAAATTTATATGTCA+CGG	+	chr7_4:47418504-47418523	None:intergenic	20.0%
!!	AATGATATATGTCTAATACA+AGG	+	chr7_4:47418625-47418644	None:intergenic	20.0%
!!!	CTTTTAATATTTTTTCTTGG+AGG	+	chr7_4:47416780-47416799	None:intergenic	20.0%
!!!	TTTCTAACTACTTTTTGTAT+AGG	-	chr7_4:47417267-47417286	Msa1158200:CDS	20.0%
!!	TGTATGTACAAAAACATTTA+AGG	-	chr7_4:47417389-47417408	Msa1158200:CDS	20.0%
!!	ACATTTGTTTGTAAAATGTA+AGG	+	chr7_4:47417542-47417561	None:intergenic	20.0%
!!	ATTCAAGATTGTTAAAGATT+AGG	+	chr7_4:47417705-47417724	None:intergenic	20.0%
!!	TTACACAAAAATAAATCAGT+TGG	+	chr7_4:47418077-47418096	None:intergenic	20.0%
!!!	TTATTTTTGTGTAACTATGA+TGG	-	chr7_4:47418083-47418102	Msa1158200:intron	20.0%
!!!	TATTTTTGTGTAACTATGAT+GGG	-	chr7_4:47418084-47418103	Msa1158200:intron	20.0%
!!!	AGTTATAAATGGTGTATTTT+TGG	+	chr7_4:47418429-47418448	None:intergenic	20.0%
!!	TGATGAAAATTTATATGTCA+CGG	+	chr7_4:47418504-47418523	None:intergenic	20.0%
!!	AATGATATATGTCTAATACA+AGG	+	chr7_4:47418625-47418644	None:intergenic	20.0%
!	AAGTATATAAAGAAAGAGAG+AGG	-	chr7_4:47416808-47416827	Msa1158200:three_prime_UTR	25.0%
!	GATCATATCAAATACTTCAA+TGG	-	chr7_4:47417053-47417072	Msa1158200:CDS	25.0%
!	ACTTCAAAACTTTCCTATTT+AGG	-	chr7_4:47417129-47417148	Msa1158200:CDS	25.0%
!	TAAAAATAGTGTGTACATGA+GGG	+	chr7_4:47417186-47417205	None:intergenic	25.0%
!	ATAAAAATAGTGTGTACATG+AGG	+	chr7_4:47417187-47417206	None:intergenic	25.0%
!!!	TGAAATAGATTTTGAGTTCT+TGG	-	chr7_4:47417499-47417518	Msa1158200:intron	25.0%
!!!	GAAATAGATTTTGAGTTCTT+GGG	-	chr7_4:47417500-47417519	Msa1158200:intron	25.0%
!!!	AAATAGATTTTGAGTTCTTG+GGG	-	chr7_4:47417501-47417520	Msa1158200:intron	25.0%
!	AAGCATATTGAGATATGATT+TGG	+	chr7_4:47417821-47417840	None:intergenic	25.0%
!	CTTACCTAAGAAGAATTAAT+TGG	-	chr7_4:47417915-47417934	Msa1158200:CDS	25.0%
!	TACACCAATTAATTCTTCTT+AGG	+	chr7_4:47417922-47417941	None:intergenic	25.0%
!!	ATGATACAATATATGGATTG+TGG	+	chr7_4:47417998-47418017	None:intergenic	25.0%
!	AAACTGTTGTATATCTTCAT+TGG	+	chr7_4:47418193-47418212	None:intergenic	25.0%
!	TGAAGATATACAACAGTTTA+TGG	-	chr7_4:47418194-47418213	Msa1158200:CDS	25.0%
!	ATCAGTGCAATAGTTATAAA+TGG	+	chr7_4:47418440-47418459	None:intergenic	25.0%
!!	TTTATAACTATTGCACTGAT+AGG	-	chr7_4:47418440-47418459	Msa1158200:CDS	25.0%
!	AAGTATATAAAGAAAGAGAG+AGG	-	chr7_4:47416808-47416827	Msa1158200:three_prime_UTR	25.0%
!	GATCATATCAAATACTTCAA+TGG	-	chr7_4:47417053-47417072	Msa1158200:CDS	25.0%
!	ACTTCAAAACTTTCCTATTT+AGG	-	chr7_4:47417129-47417148	Msa1158200:CDS	25.0%
!	TAAAAATAGTGTGTACATGA+GGG	+	chr7_4:47417186-47417205	None:intergenic	25.0%
!	ATAAAAATAGTGTGTACATG+AGG	+	chr7_4:47417187-47417206	None:intergenic	25.0%
!!!	TGAAATAGATTTTGAGTTCT+TGG	-	chr7_4:47417499-47417518	Msa1158200:intron	25.0%
!!!	GAAATAGATTTTGAGTTCTT+GGG	-	chr7_4:47417500-47417519	Msa1158200:intron	25.0%
!!!	AAATAGATTTTGAGTTCTTG+GGG	-	chr7_4:47417501-47417520	Msa1158200:intron	25.0%
!	AAGCATATTGAGATATGATT+TGG	+	chr7_4:47417821-47417840	None:intergenic	25.0%
!	CTTACCTAAGAAGAATTAAT+TGG	-	chr7_4:47417915-47417934	Msa1158200:CDS	25.0%
!	TACACCAATTAATTCTTCTT+AGG	+	chr7_4:47417922-47417941	None:intergenic	25.0%
!!	ATGATACAATATATGGATTG+TGG	+	chr7_4:47417998-47418017	None:intergenic	25.0%
!	AAACTGTTGTATATCTTCAT+TGG	+	chr7_4:47418193-47418212	None:intergenic	25.0%
!	TGAAGATATACAACAGTTTA+TGG	-	chr7_4:47418194-47418213	Msa1158200:CDS	25.0%
!	ATCAGTGCAATAGTTATAAA+TGG	+	chr7_4:47418440-47418459	None:intergenic	25.0%
!!	TTTATAACTATTGCACTGAT+AGG	-	chr7_4:47418440-47418459	Msa1158200:CDS	25.0%
!!!	AATATTTTTTCTTGGAGGGT+AGG	+	chr7_4:47416775-47416794	None:intergenic	30.0%
!!	TTCAAGTTGTGAAAAGTTTG+TGG	+	chr7_4:47416893-47416912	None:intergenic	30.0%
!	CCAAAATGAAGAACTCATTT+TGG	+	chr7_4:47416925-47416944	None:intergenic	30.0%
!	CCAAAATGAGTTCTTCATTT+TGG	-	chr7_4:47416922-47416941	Msa1158200:three_prime_UTR	30.0%
	CATATCAAATACTTCAATGG+TGG	-	chr7_4:47417056-47417075	Msa1158200:CDS	30.0%
	TATACAAACATGGCCTAAAT+AGG	+	chr7_4:47417145-47417164	None:intergenic	30.0%
!!!	ACTACTTTTTGTATAGGTAC+TGG	-	chr7_4:47417273-47417292	Msa1158200:CDS	30.0%
	TCTTTATGTTCATACTGAAG+TGG	+	chr7_4:47417329-47417348	None:intergenic	30.0%
	CTTCAGTATGAACATAAAGA+TGG	-	chr7_4:47417329-47417348	Msa1158200:CDS	30.0%
	TTACAAACAAATGTGTTCAC+TGG	-	chr7_4:47417548-47417567	Msa1158200:intron	30.0%
	AAGAACAAAGGATCTTTCTT+TGG	-	chr7_4:47417585-47417604	Msa1158200:intron	30.0%
	TTCACAGATACTCTATTCTA+TGG	-	chr7_4:47417627-47417646	Msa1158200:intron	30.0%
	AGTTAAGTACTTACACAATC+TGG	+	chr7_4:47417661-47417680	None:intergenic	30.0%
	GTTAAAGATTAGGTGACTAT+TGG	+	chr7_4:47417695-47417714	None:intergenic	30.0%
!	ATCTTCATTGGTTGGTTAAA+TGG	+	chr7_4:47418181-47418200	None:intergenic	30.0%
	TGTTGTATATCTTCATTGGT+TGG	+	chr7_4:47418189-47418208	None:intergenic	30.0%
	TTTATGGAATGCTGATGATT+GGG	-	chr7_4:47418210-47418229	Msa1158200:CDS	30.0%
	TACAAAAGTTTCCACATTGA+TGG	-	chr7_4:47418289-47418308	Msa1158200:intron	30.0%
	TCTCAATATACAAAACTCGA+TGG	+	chr7_4:47418673-47418692	None:intergenic	30.0%
!!!	AATATTTTTTCTTGGAGGGT+AGG	+	chr7_4:47416775-47416794	None:intergenic	30.0%
!!	TTCAAGTTGTGAAAAGTTTG+TGG	+	chr7_4:47416893-47416912	None:intergenic	30.0%
!	CCAAAATGAAGAACTCATTT+TGG	+	chr7_4:47416925-47416944	None:intergenic	30.0%
!	CCAAAATGAGTTCTTCATTT+TGG	-	chr7_4:47416922-47416941	Msa1158200:three_prime_UTR	30.0%
	CATATCAAATACTTCAATGG+TGG	-	chr7_4:47417056-47417075	Msa1158200:CDS	30.0%
	TATACAAACATGGCCTAAAT+AGG	+	chr7_4:47417145-47417164	None:intergenic	30.0%
!!!	ACTACTTTTTGTATAGGTAC+TGG	-	chr7_4:47417273-47417292	Msa1158200:CDS	30.0%
	TCTTTATGTTCATACTGAAG+TGG	+	chr7_4:47417329-47417348	None:intergenic	30.0%
	CTTCAGTATGAACATAAAGA+TGG	-	chr7_4:47417329-47417348	Msa1158200:CDS	30.0%
	TTACAAACAAATGTGTTCAC+TGG	-	chr7_4:47417548-47417567	Msa1158200:intron	30.0%
	AAGAACAAAGGATCTTTCTT+TGG	-	chr7_4:47417585-47417604	Msa1158200:intron	30.0%
	TTCACAGATACTCTATTCTA+TGG	-	chr7_4:47417627-47417646	Msa1158200:intron	30.0%
	AGTTAAGTACTTACACAATC+TGG	+	chr7_4:47417661-47417680	None:intergenic	30.0%
	GTTAAAGATTAGGTGACTAT+TGG	+	chr7_4:47417695-47417714	None:intergenic	30.0%
!	ATCTTCATTGGTTGGTTAAA+TGG	+	chr7_4:47418181-47418200	None:intergenic	30.0%
	TGTTGTATATCTTCATTGGT+TGG	+	chr7_4:47418189-47418208	None:intergenic	30.0%
	TTTATGGAATGCTGATGATT+GGG	-	chr7_4:47418210-47418229	Msa1158200:CDS	30.0%
	TACAAAAGTTTCCACATTGA+TGG	-	chr7_4:47418289-47418308	Msa1158200:intron	30.0%
	TCTCAATATACAAAACTCGA+TGG	+	chr7_4:47418673-47418692	None:intergenic	30.0%
	TAAAGAAAGAGAGAGGAACA+TGG	-	chr7_4:47416815-47416834	Msa1158200:three_prime_UTR	35.0%
	AAAGAAAGAGAGAGGAACAT+GGG	-	chr7_4:47416816-47416835	Msa1158200:three_prime_UTR	35.0%
!	GTCTATAACCCTTTTACCAA+AGG	-	chr7_4:47416838-47416857	Msa1158200:three_prime_UTR	35.0%
	ATATATAGGCCTAAGACCTT+TGG	+	chr7_4:47416857-47416876	None:intergenic	35.0%
	GCTAAGACTTGGGTATATAT+AGG	+	chr7_4:47416871-47416890	None:intergenic	35.0%
	AAAGTTTGTGGCTAAGACTT+GGG	+	chr7_4:47416881-47416900	None:intergenic	35.0%
	AAAAGTTTGTGGCTAAGACT+TGG	+	chr7_4:47416882-47416901	None:intergenic	35.0%
	CAGAAACTATTACCCAACTT+GGG	-	chr7_4:47417025-47417044	Msa1158200:CDS	35.0%
	TATGATCAAAAGCCCAAGTT+GGG	+	chr7_4:47417040-47417059	None:intergenic	35.0%
	ATATGATCAAAAGCCCAAGT+TGG	+	chr7_4:47417041-47417060	None:intergenic	35.0%
	CTTCATCTTGATAAGTACAC+TGG	-	chr7_4:47417092-47417111	Msa1158200:CDS	35.0%
	TCCAAAGGATCATACTTGTT+TGG	-	chr7_4:47417303-47417322	Msa1158200:CDS	35.0%
	ATGAACATAAAGATGGTTCC+TGG	-	chr7_4:47417336-47417355	Msa1158200:CDS	35.0%
	GTCAAGGTAACAAAGAACAA+AGG	-	chr7_4:47417573-47417592	Msa1158200:intron	35.0%
!!	TCTTTGGTTTGATCCAACAA+AGG	-	chr7_4:47417601-47417620	Msa1158200:intron	35.0%
	TATCTGTGAAACTCCTTTGT+TGG	+	chr7_4:47417617-47417636	None:intergenic	35.0%
!	GTGTAATGGAATGGTGAAAA+GGG	+	chr7_4:47417729-47417748	None:intergenic	35.0%
!	TGTGTAATGGAATGGTGAAA+AGG	+	chr7_4:47417730-47417749	None:intergenic	35.0%
!	TAGATTTAGTGGGTGTGTAA+TGG	+	chr7_4:47417743-47417762	None:intergenic	35.0%
	AAAGAGGAGCTAGATTTAGT+GGG	+	chr7_4:47417753-47417772	None:intergenic	35.0%
	AAAAGAGGAGCTAGATTTAG+TGG	+	chr7_4:47417754-47417773	None:intergenic	35.0%
	TTGTAGATGATGTACCAATC+AGG	-	chr7_4:47418119-47418138	Msa1158200:intron	35.0%
	TGTAGATGATGTACCAATCA+GGG	-	chr7_4:47418120-47418139	Msa1158200:intron	35.0%
	GTTTATGGAATGCTGATGAT+TGG	-	chr7_4:47418209-47418228	Msa1158200:CDS	35.0%
!!	GTGGATTAGAGAAAACAGAT+TGG	-	chr7_4:47418242-47418261	Msa1158200:intron	35.0%
!	CTTTTGTAACCTGCTATGAA+TGG	+	chr7_4:47418277-47418296	None:intergenic	35.0%
	ATGATTCACAACCATCAATG+TGG	+	chr7_4:47418303-47418322	None:intergenic	35.0%
	AAAACTCGATGGAACAATAG+TGG	+	chr7_4:47418662-47418681	None:intergenic	35.0%
	TAAAGAAAGAGAGAGGAACA+TGG	-	chr7_4:47416815-47416834	Msa1158200:three_prime_UTR	35.0%
	AAAGAAAGAGAGAGGAACAT+GGG	-	chr7_4:47416816-47416835	Msa1158200:three_prime_UTR	35.0%
!	GTCTATAACCCTTTTACCAA+AGG	-	chr7_4:47416838-47416857	Msa1158200:three_prime_UTR	35.0%
	ATATATAGGCCTAAGACCTT+TGG	+	chr7_4:47416857-47416876	None:intergenic	35.0%
	GCTAAGACTTGGGTATATAT+AGG	+	chr7_4:47416871-47416890	None:intergenic	35.0%
	AAAGTTTGTGGCTAAGACTT+GGG	+	chr7_4:47416881-47416900	None:intergenic	35.0%
	AAAAGTTTGTGGCTAAGACT+TGG	+	chr7_4:47416882-47416901	None:intergenic	35.0%
	CAGAAACTATTACCCAACTT+GGG	-	chr7_4:47417025-47417044	Msa1158200:CDS	35.0%
	TATGATCAAAAGCCCAAGTT+GGG	+	chr7_4:47417040-47417059	None:intergenic	35.0%
	ATATGATCAAAAGCCCAAGT+TGG	+	chr7_4:47417041-47417060	None:intergenic	35.0%
	CTTCATCTTGATAAGTACAC+TGG	-	chr7_4:47417092-47417111	Msa1158200:CDS	35.0%
	TCCAAAGGATCATACTTGTT+TGG	-	chr7_4:47417303-47417322	Msa1158200:CDS	35.0%
	ATGAACATAAAGATGGTTCC+TGG	-	chr7_4:47417336-47417355	Msa1158200:CDS	35.0%
	GTCAAGGTAACAAAGAACAA+AGG	-	chr7_4:47417573-47417592	Msa1158200:intron	35.0%
!!	TCTTTGGTTTGATCCAACAA+AGG	-	chr7_4:47417601-47417620	Msa1158200:intron	35.0%
	TATCTGTGAAACTCCTTTGT+TGG	+	chr7_4:47417617-47417636	None:intergenic	35.0%
!	GTGTAATGGAATGGTGAAAA+GGG	+	chr7_4:47417729-47417748	None:intergenic	35.0%
!	TGTGTAATGGAATGGTGAAA+AGG	+	chr7_4:47417730-47417749	None:intergenic	35.0%
!	TAGATTTAGTGGGTGTGTAA+TGG	+	chr7_4:47417743-47417762	None:intergenic	35.0%
	AAAGAGGAGCTAGATTTAGT+GGG	+	chr7_4:47417753-47417772	None:intergenic	35.0%
	AAAAGAGGAGCTAGATTTAG+TGG	+	chr7_4:47417754-47417773	None:intergenic	35.0%
	TTGTAGATGATGTACCAATC+AGG	-	chr7_4:47418119-47418138	Msa1158200:intron	35.0%
	TGTAGATGATGTACCAATCA+GGG	-	chr7_4:47418120-47418139	Msa1158200:intron	35.0%
	GTTTATGGAATGCTGATGAT+TGG	-	chr7_4:47418209-47418228	Msa1158200:CDS	35.0%
!!	GTGGATTAGAGAAAACAGAT+TGG	-	chr7_4:47418242-47418261	Msa1158200:intron	35.0%
!	CTTTTGTAACCTGCTATGAA+TGG	+	chr7_4:47418277-47418296	None:intergenic	35.0%
	ATGATTCACAACCATCAATG+TGG	+	chr7_4:47418303-47418322	None:intergenic	35.0%
	AAAACTCGATGGAACAATAG+TGG	+	chr7_4:47418662-47418681	None:intergenic	35.0%
!!!	ATTTTTTCTTGGAGGGTAGG+AGG	+	chr7_4:47416772-47416791	None:intergenic	40.0%
!	ACCCTTTTACCAAAGGTCTT+AGG	-	chr7_4:47416845-47416864	Msa1158200:three_prime_UTR	40.0%
	GCCTAAGACCTTTGGTAAAA+GGG	+	chr7_4:47416849-47416868	None:intergenic	40.0%
!	AAGCCAGTTGATGTACCATT+TGG	-	chr7_4:47417002-47417021	Msa1158200:three_prime_UTR	40.0%
	GGGTAATAGTTTCTGCCAAA+TGG	+	chr7_4:47417020-47417039	None:intergenic	40.0%
	GCAGAAACTATTACCCAACT+TGG	-	chr7_4:47417024-47417043	Msa1158200:CDS	40.0%
	GCCAAACAAGTATGATCCTT+TGG	+	chr7_4:47417307-47417326	None:intergenic	40.0%
	CAAACAAATGTGTTCACTGG+TGG	-	chr7_4:47417551-47417570	Msa1158200:intron	40.0%
!	TTAGTGGGTGTGTAATGGAA+TGG	+	chr7_4:47417738-47417757	None:intergenic	40.0%
!!	TGTAACTATGATGGGTTTGC+AGG	-	chr7_4:47418092-47418111	Msa1158200:intron	40.0%
	TTCAAGAACAGCAAGGACTT+GGG	-	chr7_4:47418145-47418164	Msa1158200:intron	40.0%
	AACACAAGGCAAAAGATGGT+GGG	-	chr7_4:47418345-47418364	Msa1158200:intron	40.0%
	GCATCAAGATCACGAAATTC+AGG	+	chr7_4:47418376-47418395	None:intergenic	40.0%
	TTGCATTCAGGTGGAATTTG+AGG	+	chr7_4:47418475-47418494	None:intergenic	40.0%
!!!	ATTTTTTCTTGGAGGGTAGG+AGG	+	chr7_4:47416772-47416791	None:intergenic	40.0%
!	ACCCTTTTACCAAAGGTCTT+AGG	-	chr7_4:47416845-47416864	Msa1158200:three_prime_UTR	40.0%
	GCCTAAGACCTTTGGTAAAA+GGG	+	chr7_4:47416849-47416868	None:intergenic	40.0%
!	AAGCCAGTTGATGTACCATT+TGG	-	chr7_4:47417002-47417021	Msa1158200:three_prime_UTR	40.0%
	GGGTAATAGTTTCTGCCAAA+TGG	+	chr7_4:47417020-47417039	None:intergenic	40.0%
	GCAGAAACTATTACCCAACT+TGG	-	chr7_4:47417024-47417043	Msa1158200:CDS	40.0%
	GCCAAACAAGTATGATCCTT+TGG	+	chr7_4:47417307-47417326	None:intergenic	40.0%
	CAAACAAATGTGTTCACTGG+TGG	-	chr7_4:47417551-47417570	Msa1158200:intron	40.0%
!	TTAGTGGGTGTGTAATGGAA+TGG	+	chr7_4:47417738-47417757	None:intergenic	40.0%
!!	TGTAACTATGATGGGTTTGC+AGG	-	chr7_4:47418092-47418111	Msa1158200:intron	40.0%
	TTCAAGAACAGCAAGGACTT+GGG	-	chr7_4:47418145-47418164	Msa1158200:intron	40.0%
	AACACAAGGCAAAAGATGGT+GGG	-	chr7_4:47418345-47418364	Msa1158200:intron	40.0%
	GCATCAAGATCACGAAATTC+AGG	+	chr7_4:47418376-47418395	None:intergenic	40.0%
	TTGCATTCAGGTGGAATTTG+AGG	+	chr7_4:47418475-47418494	None:intergenic	40.0%
	GGCCTAAGACCTTTGGTAAA+AGG	+	chr7_4:47416850-47416869	None:intergenic	45.0%
	CTGCCAAATGGTACATCAAC+TGG	+	chr7_4:47417008-47417027	None:intergenic	45.0%
!!!	GGTACTGGTTTTCAGTCCAA+AGG	-	chr7_4:47417288-47417307	Msa1158200:CDS	45.0%
	AATGTGTTCACTGGTGGTCA+AGG	-	chr7_4:47417557-47417576	Msa1158200:intron	45.0%
	CTGTTCTTGAACACCCTGAT+TGG	+	chr7_4:47418136-47418155	None:intergenic	45.0%
	GTTCAAGAACAGCAAGGACT+TGG	-	chr7_4:47418144-47418163	Msa1158200:intron	45.0%
!	TCCAAAGCACCATTCATAGC+AGG	-	chr7_4:47418265-47418284	Msa1158200:intron	45.0%
	ACCTGCTATGAATGGTGCTT+TGG	+	chr7_4:47418269-47418288	None:intergenic	45.0%
	GCCAAATTCTGTGCAACACA+AGG	-	chr7_4:47418331-47418350	Msa1158200:intron	45.0%
	GCCTTGTGTTGCACAGAATT+TGG	+	chr7_4:47418335-47418354	None:intergenic	45.0%
	GTGCAACACAAGGCAAAAGA+TGG	-	chr7_4:47418341-47418360	Msa1158200:intron	45.0%
	CAACACAAGGCAAAAGATGG+TGG	-	chr7_4:47418344-47418363	Msa1158200:intron	45.0%
	GTGATCTTGATGCTGCTCAA+TGG	-	chr7_4:47418383-47418402	Msa1158200:intron	45.0%
	TCAATGGCGTAGGCTAAGAT+GGG	-	chr7_4:47418399-47418418	Msa1158200:intron	45.0%
	GGCCTAAGACCTTTGGTAAA+AGG	+	chr7_4:47416850-47416869	None:intergenic	45.0%
	CTGCCAAATGGTACATCAAC+TGG	+	chr7_4:47417008-47417027	None:intergenic	45.0%
!!!	GGTACTGGTTTTCAGTCCAA+AGG	-	chr7_4:47417288-47417307	Msa1158200:CDS	45.0%
	AATGTGTTCACTGGTGGTCA+AGG	-	chr7_4:47417557-47417576	Msa1158200:intron	45.0%
	CTGTTCTTGAACACCCTGAT+TGG	+	chr7_4:47418136-47418155	None:intergenic	45.0%
	GTTCAAGAACAGCAAGGACT+TGG	-	chr7_4:47418144-47418163	Msa1158200:intron	45.0%
!	TCCAAAGCACCATTCATAGC+AGG	-	chr7_4:47418265-47418284	Msa1158200:intron	45.0%
	ACCTGCTATGAATGGTGCTT+TGG	+	chr7_4:47418269-47418288	None:intergenic	45.0%
	GCCAAATTCTGTGCAACACA+AGG	-	chr7_4:47418331-47418350	Msa1158200:intron	45.0%
	GCCTTGTGTTGCACAGAATT+TGG	+	chr7_4:47418335-47418354	None:intergenic	45.0%
	GTGCAACACAAGGCAAAAGA+TGG	-	chr7_4:47418341-47418360	Msa1158200:intron	45.0%
	CAACACAAGGCAAAAGATGG+TGG	-	chr7_4:47418344-47418363	Msa1158200:intron	45.0%
	GTGATCTTGATGCTGCTCAA+TGG	-	chr7_4:47418383-47418402	Msa1158200:intron	45.0%
	TCAATGGCGTAGGCTAAGAT+GGG	-	chr7_4:47418399-47418418	Msa1158200:intron	45.0%
!	ACATCAACTGGCTTCCTTGG+AGG	+	chr7_4:47416996-47417015	None:intergenic	50.0%
!	GGTACATCAACTGGCTTCCT+TGG	+	chr7_4:47416999-47417018	None:intergenic	50.0%
	ATGGTTCCTGGTGATTCAGC+TGG	-	chr7_4:47417348-47417367	Msa1158200:CDS	50.0%
	ACTGTTCCAGCTGAATCACC+AGG	+	chr7_4:47417357-47417376	None:intergenic	50.0%
	GAGTTCTTGGGGAACAGAAC+AGG	-	chr7_4:47417512-47417531	Msa1158200:intron	50.0%
!	CAGGGTGTTCAAGAACAGCA+AGG	-	chr7_4:47418138-47418157	Msa1158200:intron	50.0%
	GCTGATGATTGGGCAACAAG+AGG	-	chr7_4:47418220-47418239	Msa1158200:CDS	50.0%
	GATGATTGGGCAACAAGAGG+TGG	-	chr7_4:47418223-47418242	Msa1158200:CDS	50.0%
	TTGATGCTGCTCAATGGCGT+AGG	-	chr7_4:47418389-47418408	Msa1158200:intron	50.0%
	CTCAATGGCGTAGGCTAAGA+TGG	-	chr7_4:47418398-47418417	Msa1158200:intron	50.0%
	TCACGGTCTCTCTTGCATTC+AGG	+	chr7_4:47418487-47418506	None:intergenic	50.0%
!	ACATCAACTGGCTTCCTTGG+AGG	+	chr7_4:47416996-47417015	None:intergenic	50.0%
!	GGTACATCAACTGGCTTCCT+TGG	+	chr7_4:47416999-47417018	None:intergenic	50.0%
	ATGGTTCCTGGTGATTCAGC+TGG	-	chr7_4:47417348-47417367	Msa1158200:CDS	50.0%
	ACTGTTCCAGCTGAATCACC+AGG	+	chr7_4:47417357-47417376	None:intergenic	50.0%
	GAGTTCTTGGGGAACAGAAC+AGG	-	chr7_4:47417512-47417531	Msa1158200:intron	50.0%
!	CAGGGTGTTCAAGAACAGCA+AGG	-	chr7_4:47418138-47418157	Msa1158200:intron	50.0%
	GCTGATGATTGGGCAACAAG+AGG	-	chr7_4:47418220-47418239	Msa1158200:CDS	50.0%
	GATGATTGGGCAACAAGAGG+TGG	-	chr7_4:47418223-47418242	Msa1158200:CDS	50.0%
	TTGATGCTGCTCAATGGCGT+AGG	-	chr7_4:47418389-47418408	Msa1158200:intron	50.0%
	CTCAATGGCGTAGGCTAAGA+TGG	-	chr7_4:47418398-47418417	Msa1158200:intron	50.0%
	TCACGGTCTCTCTTGCATTC+AGG	+	chr7_4:47418487-47418506	None:intergenic	50.0%
	CTTCACTCTGTGCTCCTCCA+AGG	-	chr7_4:47416979-47416998	Msa1158200:three_prime_UTR	55.0%
	CGGTCTCTCTTGCATTCAGG+TGG	+	chr7_4:47418484-47418503	None:intergenic	55.0%
	CTTCACTCTGTGCTCCTCCA+AGG	-	chr7_4:47416979-47416998	Msa1158200:three_prime_UTR	55.0%
	CGGTCTCTCTTGCATTCAGG+TGG	+	chr7_4:47418484-47418503	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	47416759	47418776	47416759	ID=Msa1158200;Name=Msa1158200
chr7_4	mRNA	47416759	47418776	47416759	ID=Msa1158200-mRNA-1;Parent=Msa1158200;Name=Msa1158200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168\|1\|1\|1\|1\|1\|4\|263\|293
chr7_4	exon	47416759	47417421	47416759	ID=Msa1158200-mRNA-1:exon:12651;Parent=Msa1158200-mRNA-1
chr7_4	exon	47417869	47418062	47417869	ID=Msa1158200-mRNA-1:exon:12650;Parent=Msa1158200-mRNA-1
chr7_4	exon	47418146	47418246	47418146	ID=Msa1158200-mRNA-1:exon:12649;Parent=Msa1158200-mRNA-1
chr7_4	exon	47418422	47418776	47418422	ID=Msa1158200-mRNA-1:exon:12648;Parent=Msa1158200-mRNA-1
chr7_4	five_prime_UTR	47418609	47418776	47418609	ID=Msa1158200-mRNA-1:five_prime_utr;Parent=Msa1158200-mRNA-1
chr7_4	CDS	47418422	47418608	47418422	ID=Msa1158200-mRNA-1:cds;Parent=Msa1158200-mRNA-1
chr7_4	CDS	47418146	47418246	47418146	ID=Msa1158200-mRNA-1:cds;Parent=Msa1158200-mRNA-1
chr7_4	CDS	47417869	47418062	47417869	ID=Msa1158200-mRNA-1:cds;Parent=Msa1158200-mRNA-1
chr7_4	CDS	47417022	47417421	47417022	ID=Msa1158200-mRNA-1:cds;Parent=Msa1158200-mRNA-1
chr7_4	three_prime_UTR	47416759	47417021	47416759	ID=Msa1158200-mRNA-1:three_prime_utr;Parent=Msa1158200-mRNA-1

Gene Sequence

>Msa1158200

ATGAGTTCTTCATTTTGGACTTTATGTTTGATTTTAGCATCACTAGTTTCTTCTTCACTCTGTGCTCCTCCAAGGAAGCCAGTTGATGTACCATTTGGCAGAAACTATTACCCAACTTGGGCTTTTGATCATATCAAATACTTCAATGGTGGTTCTGAGATTCAACTTCATCTTGATAAGTACACTGGTACTGGTTTTCAGTCCAAAGGATCATACTTGTTTGGCCACTTCAGTATGAACATAAAGATGGTTCCTGGTGATTCAGCTGGAACAGTCACTGCTTTCTATCTATCTTCACAAAATGCTGAGCATGATGAAATAGATTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTTTACAAACAAATGTGTTCACTGGTGGTCAAGGTAACAAAGAACAAAGGATCTTTCTTTGGTTTGATCCAACAAAGGAGTTTCACAGATACTCTATTCTATGGAACATGTACCAGATTGTGTTTTTTGTAGATGATGTACCAATCAGGGTGTTCAAGAACAGCAAGGACTTGGGAGTGAAATTTCCATTTAACCAACCAATGAAGATATACAACAGTTTATGGAATGCTGATGATTGGGCAACAAGAGGTGGATTAGAGAAAACAGATTGGTCCAAAGCACCATTCATAGCAGGTTACAAAAGTTTCCACATTGATGGTTGTGAATCATCTGTACAAGCCAAATTCTGTGCAACACAAGGCAAAAGATGGTGGGATCAACCTGAATTTCGTGATCTTGATGCTGCTCAATGGCGTAGGCTAAGATGGGTGCGCCAAAAATACACCATTTATAACTATTGCACTGATAGGAAACGTTTGCCTCAAATTCCACCTGAATGCAAGAGAGACCGTGACATATAA

Protein sequence

>Msa1158200

MSSSFWTLCLILASLVSSSLCAPPRKPVDVPFGRNYYPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMNIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGQGNKEQRIFLWFDPTKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFHIDGCESSVQAKFCATQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDRKRLPQIPPECKRDRDI*