AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1016490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016490 MtrunA17_Chr7g0231861 87.687 268 14 2 1 253 1 264 1.22e-166 461
Msa1016490 MtrunA17_Chr4g0043281 40.323 186 109 2 69 253 82 266 7.89e-39 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016490 AT2G45060.1 51.799 278 103 5 1 253 1 272 4.57e-88 262
Msa1016490 AT4G26410.1 30.702 228 145 3 38 253 37 263 3.08e-28 108

Find 87 sgRNAs with CRISPR-Local

Find 838 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTCAACTTCAGATTTC+AGG 0.143619 7_1:-33210552 None:intergenic
TTGCTTCAGCATGCTATAAA+TGG 0.211415 7_1:+33220814 Msa1016490:three_prime_UTR
CTGAAGCAAAGTTTCTTAAA+TGG 0.227188 7_1:-33220800 None:intergenic
CGCTGCTTCCGTGGGGCTTC+TGG 0.231176 7_1:+33209450 Msa1016490:CDS
CTGTTGAGTGCAGGATTATT+TGG 0.274848 7_1:+33209259 Msa1016490:intron
CGATAAACGGTTTCACATCT+AGG 0.274955 7_1:-33208260 None:intergenic
AGGATTGGTGGTTGTGGTTG+TGG 0.286011 7_1:-33208232 None:intergenic
TCACATCCAGTAATTACTTC+TGG 0.304000 7_1:+33209424 Msa1016490:CDS
GTCTCTAAAATTAGCAACTA+TGG 0.333849 7_1:+33220772 Msa1016490:CDS
GGATTGGTGGTTGTGGTTGT+GGG 0.338153 7_1:-33208231 None:intergenic
GGTGGTTGTGGTTGTGGGTG+TGG 0.347494 7_1:-33208226 None:intergenic
CAAACCAATGAAGTAGAAAA+AGG 0.349686 7_1:-33221244 None:intergenic
AAAGCGAAGCGTCTCACTTT+CGG 0.354558 7_1:+33215986 Msa1016490:CDS
CACATCTAGGGTTTGAGGAT+TGG 0.357353 7_1:-33208247 None:intergenic
ATGCCGACTGAATCACATTT+CGG 0.361195 7_1:-33215797 None:intergenic
GCTTATGAGGAACTTCTGTT+TGG 0.368451 7_1:+33209305 Msa1016490:CDS
CGTCTCGGATATTTATAATT+CGG 0.379881 7_1:-33221201 None:intergenic
ATCACATGAACTGAAAATAA+AGG 0.380901 7_1:+33221167 Msa1016490:three_prime_UTR
TGGTTAACGGAGGGAATGGG+TGG 0.387400 7_1:-33208201 None:intergenic
CTTTACATCAGAAGCAAGTT+GGG 0.408856 7_1:-33220722 None:intergenic
GAGGGAATGGGTGGGGATGG+AGG 0.414542 7_1:-33208192 None:intergenic
GGTTTGAGGATTGGTGGTTG+TGG 0.416534 7_1:-33208238 None:intergenic
TTCTGGAGCCGCTGCTTCCG+TGG 0.417580 7_1:+33209441 Msa1016490:CDS
ATCTAGGGTTTGAGGATTGG+TGG 0.420157 7_1:-33208244 None:intergenic
ATTTGTCAACTAAGTTATAC+AGG 0.420836 7_1:-33221066 None:intergenic
TGTGGGTGTGGAGTGGTTAA+CGG 0.422651 7_1:-33208214 None:intergenic
GGAGTGGTTAACGGAGGGAA+TGG 0.429910 7_1:-33208205 None:intergenic
GGGTGGGGATGGAGGTGCTT+CGG 0.430167 7_1:-33208184 None:intergenic
GCGGCTCCAGAAGTAATTAC+TGG 0.435641 7_1:-33209430 None:intergenic
GTTAACGGAGGGAATGGGTG+GGG 0.436663 7_1:-33208199 None:intergenic
AGCGTCTCACTTTCGGTCAC+AGG 0.438932 7_1:+33215993 Msa1016490:CDS
CAACTCTTTAACTTCTTCAC+TGG 0.439070 7_1:-33210512 None:intergenic
TCTGGAGCCGCTGCTTCCGT+GGG 0.440925 7_1:+33209442 Msa1016490:CDS
AGTTTATAGTCTATCGTCAA+TGG 0.444285 7_1:+33221277 Msa1016490:three_prime_UTR
AACTAAGTTATACAGGTGTT+TGG 0.446596 7_1:-33221059 None:intergenic
ACGGAGGGAATGGGTGGGGA+TGG 0.451282 7_1:-33208195 None:intergenic
GCTTTACATCAGAAGCAAGT+TGG 0.454623 7_1:-33220723 None:intergenic
TTCAAAATATTGAAAGCAGC+TGG 0.465283 7_1:+33221307 Msa1016490:three_prime_UTR
CTTCTGTTTGGAAAGATCAA+AGG 0.465741 7_1:+33209317 Msa1016490:CDS
GTTATGTTGCAGGGCCTCGT+CGG 0.465886 7_1:+33209771 Msa1016490:intron
TTAGGTTTAAAAGATATCCT+TGG 0.471874 7_1:+33215952 Msa1016490:intron
ATTTATTATGTTTGCAAGAG+GGG 0.475726 7_1:+33220910 Msa1016490:three_prime_UTR
AGAATCCACGGCGTCGTTGA+AGG 0.477454 7_1:-33208319 None:intergenic
GAGTGGTTAACGGAGGGAAT+GGG 0.479680 7_1:-33208204 None:intergenic
CCAACAGCGTAATCGATAAA+CGG 0.482327 7_1:-33208273 None:intergenic
GTCTCAGTACAATGCTTATG+AGG 0.483859 7_1:+33209292 Msa1016490:CDS
AAAAGGGAGGGTATGACGAT+TGG 0.490689 7_1:-33220869 None:intergenic
GGCATATAAAATTGAAAGAC+GGG 0.493460 7_1:+33215815 Msa1016490:CDS
CCGTTTATCGATTACGCTGT+TGG 0.498645 7_1:+33208273 Msa1016490:CDS
TATGTTTATCACAGACAAGC+AGG 0.505552 7_1:+33215765 Msa1016490:intron
ATGCATCGTTCTCAGTAGAA+AGG 0.510122 7_1:+33220933 Msa1016490:three_prime_UTR
CTGATTATGTTGTTACGTCT+CGG 0.511073 7_1:-33221216 None:intergenic
GGTTTCACATCTAGGGTTTG+AGG 0.512421 7_1:-33208252 None:intergenic
GATAAACGGTTTCACATCTA+GGG 0.519651 7_1:-33208259 None:intergenic
GAAATCTGAAGTTGAAAGGA+TGG 0.520015 7_1:+33210555 Msa1016490:CDS
TTGTGGTTGTGGGTGTGGAG+TGG 0.522084 7_1:-33208221 None:intergenic
TGCATCGTTCTCAGTAGAAA+GGG 0.526363 7_1:+33220934 Msa1016490:three_prime_UTR
CAGAAGCCCCACGGAAGCAG+CGG 0.527038 7_1:-33209449 None:intergenic
TTTAGAGACCTCCTTGGCCA+AGG 0.528398 7_1:-33220758 None:intergenic
TCCTGAAATCTGAAGTTGAA+AGG 0.531589 7_1:+33210551 Msa1016490:CDS
TATAAAATTGAAAGACGGGC+AGG 0.545378 7_1:+33215819 Msa1016490:CDS
GGTTAACGGAGGGAATGGGT+GGG 0.566206 7_1:-33208200 None:intergenic
GATTTATTATGTTTGCAAGA+GGG 0.566882 7_1:+33220909 Msa1016490:three_prime_UTR
CGGCATATAAAATTGAAAGA+CGG 0.568210 7_1:+33215814 Msa1016490:CDS
TTGCAAACATAATAAATCAA+AGG 0.571791 7_1:-33220904 None:intergenic
AAAGCAAGAAAAGAGATCCT+TGG 0.573726 7_1:+33220741 Msa1016490:CDS
TACATGGAAGGACAAAACTC+AGG 0.575295 7_1:+33215670 Msa1016490:CDS
GCAGAAGAGCAATTCTTACA+TGG 0.576481 7_1:+33215654 Msa1016490:CDS
TGATTTATTATGTTTGCAAG+AGG 0.588233 7_1:+33220908 Msa1016490:three_prime_UTR
GTGAAGAAGTTAAAGAGTTG+CGG 0.591805 7_1:+33210515 Msa1016490:CDS
AATTTGAGAGAAACGAGAAG+TGG 0.600170 7_1:-33208355 None:intergenic
AGAAAAGAGATCCTTGGCCA+AGG 0.602373 7_1:+33220747 Msa1016490:CDS
ATCTGAAGTTGAAAGGATGG+AGG 0.605127 7_1:+33210558 Msa1016490:CDS
AAGAGCAATTCTTACATGGA+AGG 0.605942 7_1:+33215658 Msa1016490:CDS
CTCGGATATTTATAATTCGG+CGG 0.607456 7_1:-33221198 None:intergenic
AGCGTCGATTGCAGAATCCA+CGG 0.621867 7_1:-33208331 None:intergenic
AATCCGAAATGTGATTCAGT+CGG 0.633740 7_1:+33215794 Msa1016490:CDS
CTGGAGCCGCTGCTTCCGTG+GGG 0.647508 7_1:+33209443 Msa1016490:CDS
GGGTGTGGAGTGGTTAACGG+AGG 0.648190 7_1:-33208211 None:intergenic
AGCGCTTTGTATATTCGAAG+CGG 0.649778 7_1:-33221015 None:intergenic
TTTGAGGACCAGAAGCCCCA+CGG 0.650884 7_1:-33209458 None:intergenic
AAAATTGAAAGACGGGCAGG+AGG 0.652907 7_1:+33215822 Msa1016490:CDS
AAAGAGATCCTTGGCCAAGG+AGG 0.655870 7_1:+33220750 Msa1016490:CDS
TCAAACAATGACAACTGTGG+CGG 0.662055 7_1:+33208149 None:intergenic
GGTGTGGAGTGGTTAACGGA+GGG 0.664825 7_1:-33208210 None:intergenic
GCATCAAACAATGACAACTG+TGG 0.717778 7_1:+33208146 None:intergenic
TTGTAGTACAAGAACCGACG+AGG 0.727731 7_1:-33209785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAAAAAAGTCAAT+CGG + chr7_1:33209030-33209049 Msa1016490:intron 10.0%
!!! ATTTTGAAAAAAATAGATTT+TGG + chr7_1:33212532-33212551 Msa1016490:intron 10.0%
!! AACAGTTTATTTATATTTAT+GGG - chr7_1:33214738-33214757 None:intergenic 10.0%
!! TAACAGTTTATTTATATTTA+TGG - chr7_1:33214739-33214758 None:intergenic 10.0%
!!! ATAAATAATCTTCTATATTT+TGG - chr7_1:33215273-33215292 None:intergenic 10.0%
!! TAAAAATTGAAATTAAAAGA+TGG - chr7_1:33215500-33215519 None:intergenic 10.0%
!!! TATATATATATATTGATTGT+AGG - chr7_1:33217036-33217055 None:intergenic 10.0%
!! TAATAAAGTTTAAAAAAATC+AGG + chr7_1:33219728-33219747 Msa1016490:intron 10.0%
!!! TACTAGAATTTTTTTTTTTT+GGG + chr7_1:33219773-33219792 Msa1016490:intron 10.0%
!!! TGTATTTTATTACTGAATTT+CGG + chr7_1:33209547-33209566 Msa1016490:intron 15.0%
!!! ATTATCCTTTTTTTAAATCT+TGG + chr7_1:33209749-33209768 Msa1016490:intron 15.0%
!! ATGTTTATTTATATAAGTAG+TGG + chr7_1:33210700-33210719 Msa1016490:intron 15.0%
!! TACATGATAAGAATTTATAT+AGG - chr7_1:33210912-33210931 None:intergenic 15.0%
!!! CTCTTTTTTTTGTTAAAAAA+GGG - chr7_1:33212483-33212502 None:intergenic 15.0%
!!! ACTCTTTTTTTTGTTAAAAA+AGG - chr7_1:33212484-33212503 None:intergenic 15.0%
!!! ATCTATTTTTTTCAAAATCA+AGG - chr7_1:33212530-33212549 None:intergenic 15.0%
!!! ATTAAAAAATCTGAAACAAA+CGG + chr7_1:33212686-33212705 Msa1016490:intron 15.0%
!! AAAGAGAAATAGATTAAATT+TGG - chr7_1:33212822-33212841 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr7_1:33214360-33214379 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr7_1:33214359-33214378 Msa1016490:intron 15.0%
!! TTATTTATATTTATGGGAAA+GGG - chr7_1:33214732-33214751 None:intergenic 15.0%
!! TTTATTTATATTTATGGGAA+AGG - chr7_1:33214733-33214752 None:intergenic 15.0%
!! ATAAACTGTTATGATTTATT+TGG + chr7_1:33214748-33214767 Msa1016490:intron 15.0%
!! TAAACTGTTATGATTTATTT+GGG + chr7_1:33214749-33214768 Msa1016490:intron 15.0%
!!! TTCATAATAGTTTTTTTTAG+AGG - chr7_1:33214916-33214935 None:intergenic 15.0%
!!! AAATCTTATTTTTCTTAGTT+GGG + chr7_1:33215013-33215032 Msa1016490:intron 15.0%
!!! ATTTTAAAAATGTATATGAG+AGG + chr7_1:33215403-33215422 Msa1016490:intron 15.0%
!!! AATTGCTATTAAATTATTCA+TGG + chr7_1:33215586-33215605 Msa1016490:intron 15.0%
!! AAAATGTACTTTCTATAATT+AGG + chr7_1:33215850-33215869 Msa1016490:intron 15.0%
!!! AATTTCTAAGAATCTATATT+AGG + chr7_1:33216901-33216920 Msa1016490:intron 15.0%
!!! AATTTAAAACTTAATAACCT+TGG - chr7_1:33218770-33218789 None:intergenic 15.0%
!! AAAAGAAGATGTAAATTAAA+AGG - chr7_1:33218797-33218816 None:intergenic 15.0%
!!! TTTTAATTTACATCTTCTTT+TGG + chr7_1:33218796-33218815 Msa1016490:intron 15.0%
!!! TGATTTTATCATTTTGTTTT+AGG + chr7_1:33219300-33219319 Msa1016490:intron 15.0%
!! ACAAAAATTGTTAAACTTAA+AGG + chr7_1:33219681-33219700 Msa1016490:intron 15.0%
!!! CTACTAGAATTTTTTTTTTT+TGG + chr7_1:33219772-33219791 Msa1016490:intron 15.0%
!!! AATAGTTTGTTTGATAAAAT+AGG + chr7_1:33220024-33220043 Msa1016490:intron 15.0%
!! TAATCTCTTATATATTGAAT+AGG + chr7_1:33220600-33220619 Msa1016490:intron 15.0%
!! GCTAAAACTAAAAAAACAAA+AGG - chr7_1:33208434-33208453 None:intergenic 20.0%
!!! TAGAGATGTGATATATTTTT+CGG + chr7_1:33208666-33208685 Msa1016490:intron 20.0%
!! AGAGATATGATACAAAATTA+CGG + chr7_1:33208855-33208874 Msa1016490:intron 20.0%
!!! GATTTTATTTTACTTGAGAT+TGG + chr7_1:33209352-33209371 Msa1016490:intron 20.0%
!!! TAAAACAAATCTTACTTTTG+AGG - chr7_1:33209477-33209496 None:intergenic 20.0%
!! GATGATAATAATGATACAAT+AGG - chr7_1:33209574-33209593 None:intergenic 20.0%
!! CATAACCAAGATTTAAAAAA+AGG - chr7_1:33209757-33209776 None:intergenic 20.0%
!! TATTTATTCAAGACAATGTT+CGG - chr7_1:33209956-33209975 None:intergenic 20.0%
!! AATATGTTGTGTTTGTAATA+AGG + chr7_1:33209995-33210014 Msa1016490:intron 20.0%
!! TATCAAAAAAGTAATAGGAA+AGG - chr7_1:33212286-33212305 None:intergenic 20.0%
!! CAATGTATCAAAAAAGTAAT+AGG - chr7_1:33212291-33212310 None:intergenic 20.0%
!! TTGTTAAAAAAGGGATTTAT+GGG - chr7_1:33212474-33212493 None:intergenic 20.0%
!! TTTGTTAAAAAAGGGATTTA+TGG - chr7_1:33212475-33212494 None:intergenic 20.0%
!!! TATTTTTTTCAAAATCAAGG+AGG - chr7_1:33212527-33212546 None:intergenic 20.0%
!! ATTGTATACTGGATTTAAAA+CGG + chr7_1:33212722-33212741 Msa1016490:intron 20.0%
!!! AAGTGTGTTTAATTTTCATA+AGG - chr7_1:33212760-33212779 None:intergenic 20.0%
!! AAAAATGAAATTATAGGTCT+AGG - chr7_1:33214819-33214838 None:intergenic 20.0%
!!! GAAATCTTATTTTTCTTAGT+TGG + chr7_1:33215012-33215031 Msa1016490:intron 20.0%
!! TCTCCTTAAAAGAAAAAATT+GGG + chr7_1:33215220-33215239 Msa1016490:intron 20.0%
!!! TTTTGATAATGGCTTATTTT+TGG + chr7_1:33215920-33215939 Msa1016490:intron 20.0%
!! TAAGAAAAATAGAAACTATG+TGG - chr7_1:33216056-33216075 None:intergenic 20.0%
!!! ATATTAGTCTTGTTGATTTT+TGG + chr7_1:33216111-33216130 Msa1016490:intron 20.0%
!!! TAATGTGATGAAAATTTTCA+AGG + chr7_1:33216176-33216195 Msa1016490:intron 20.0%
!!! TAACATAAAGCAATTTGTTT+AGG + chr7_1:33216548-33216567 Msa1016490:intron 20.0%
!! ATATAGATTCTTAGAAATTG+TGG - chr7_1:33216900-33216919 None:intergenic 20.0%
!! TAACTCATTCTTTAAATTCA+AGG - chr7_1:33217159-33217178 None:intergenic 20.0%
!! TATTCTTTCATGCTTATATA+TGG + chr7_1:33217261-33217280 Msa1016490:intron 20.0%
!! TATTCTTTCATGCTTATATA+TGG - chr7_1:33217261-33217280 None:intergenic 20.0%
!!! AAGTACAACTTTTGAAATAA+TGG - chr7_1:33219049-33219068 None:intergenic 20.0%
!!! TTTTTGTAATTGAAAGTACT+CGG + chr7_1:33219327-33219346 Msa1016490:intron 20.0%
!! ATTCTTTGATATGATTGTTT+CGG - chr7_1:33220074-33220093 None:intergenic 20.0%
!! TCAAAGAATAAAATGAAAGA+AGG + chr7_1:33220085-33220104 Msa1016490:intron 20.0%
!! TTGCAAACATAATAAATCAA+AGG - chr7_1:33220907-33220926 None:intergenic 20.0%
!! TATACAAGAAAAATACATTG+AGG + chr7_1:33220959-33220978 Msa1016490:three_prime_UTR 20.0%
!!! AAAAGTAAATTTTGAGTTGA+AGG - chr7_1:33220992-33221011 None:intergenic 20.0%
!! AGAGATGTGATATATTTTTC+GGG + chr7_1:33208667-33208686 Msa1016490:intron 25.0%
! AGTAATGTTAAATCTCTAGA+GGG - chr7_1:33208751-33208770 None:intergenic 25.0%
! CGATTGTGTAAAATTGAATA+TGG + chr7_1:33208948-33208967 Msa1016490:intron 25.0%
!! TAAAAGTGAGTTGAATGTAT+AGG + chr7_1:33208972-33208991 Msa1016490:intron 25.0%
!! AAAAGTGAGTTGAATGTATA+GGG + chr7_1:33208973-33208992 Msa1016490:intron 25.0%
! AATGTATAGGGATTTATGTT+TGG + chr7_1:33208985-33209004 Msa1016490:intron 25.0%
! TGGATACATTCAATTTAAAG+TGG + chr7_1:33209005-33209024 Msa1016490:intron 25.0%
! ATAAAAAAGTCAATCGGAAA+AGG + chr7_1:33209036-33209055 Msa1016490:intron 25.0%
!! TATAATTGATTCATTGAAGC+TGG - chr7_1:33209077-33209096 None:intergenic 25.0%
! CTTATGGAACATATAGAATA+AGG - chr7_1:33209715-33209734 None:intergenic 25.0%
! ATCAGTTATTGAATCACTTA+TGG - chr7_1:33209731-33209750 None:intergenic 25.0%
! ATTTATCTCTCTATTCATCA+CGG + chr7_1:33209851-33209870 Msa1016490:intron 25.0%
! ACATTGTCTTGAATAAATAC+TGG + chr7_1:33209957-33209976 Msa1016490:intron 25.0%
! TAAGAGAAATAAAAGAAACG+AGG + chr7_1:33210049-33210068 Msa1016490:intron 25.0%
! AAATAAAAGAAACGAGGTTA+AGG + chr7_1:33210055-33210074 Msa1016490:intron 25.0%
! TGTTCACTTCAAATTATGTT+AGG - chr7_1:33210208-33210227 None:intergenic 25.0%
!! AACATAATTTGAAGTGAACA+TGG + chr7_1:33210208-33210227 Msa1016490:intron 25.0%
!! TTTTGCTAACCATAATACTA+TGG + chr7_1:33210317-33210336 Msa1016490:intron 25.0%
! AAGCAATATTGCAATTGTTA+TGG - chr7_1:33210383-33210402 None:intergenic 25.0%
! ATGTAACATGAAGGAAAAAA+AGG - chr7_1:33211203-33211222 None:intergenic 25.0%
!! CGCTAATACTTTTATACAAA+AGG + chr7_1:33211292-33211311 Msa1016490:intron 25.0%
!!! AAAGGACTAATACTTTTTCA+TGG + chr7_1:33211310-33211329 Msa1016490:intron 25.0%
! AAACCTGAAGAATTTAAGAA+AGG + chr7_1:33211645-33211664 Msa1016490:intron 25.0%
! TTTCCTTTCTTAAATTCTTC+AGG - chr7_1:33211651-33211670 None:intergenic 25.0%
! TCAAAACGTAAATAGAGAAT+TGG + chr7_1:33211909-33211928 Msa1016490:intron 25.0%
!! TTCTCTTGTTTGATTTAACA+AGG + chr7_1:33212084-33212103 Msa1016490:intron 25.0%
! TAACAAGGAAAAAAAAAACG+TGG + chr7_1:33212099-33212118 Msa1016490:intron 25.0%
! CCAGTATACAATTTATACTA+TGG - chr7_1:33212714-33212733 None:intergenic 25.0%
! CCATAGTATAAATTGTATAC+TGG + chr7_1:33212711-33212730 Msa1016490:intron 25.0%
!! TTGTATACTGGATTTAAAAC+GGG + chr7_1:33212723-33212742 Msa1016490:intron 25.0%
! ATTAAATTTGGCGTATTGTT+CGG - chr7_1:33212810-33212829 None:intergenic 25.0%
! TTAGTGGAAAAGACTTATTT+GGG + chr7_1:33213465-33213484 Msa1016490:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr7_1:33213616-33213635 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr7_1:33213623-33213642 Msa1016490:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr7_1:33213758-33213777 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr7_1:33214366-33214385 Msa1016490:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr7_1:33214367-33214386 Msa1016490:intron 25.0%
! AAGAAAAGAAAAAAGACTTG+TGG + chr7_1:33214792-33214811 Msa1016490:intron 25.0%
! AGAAAAGAAAAAAGACTTGT+GGG + chr7_1:33214793-33214812 Msa1016490:intron 25.0%
! CTCTCCTTAAAAGAAAAAAT+TGG + chr7_1:33215219-33215238 Msa1016490:intron 25.0%
! TTAAAAATGTATATGAGAGG+AGG + chr7_1:33215406-33215425 Msa1016490:intron 25.0%
! ATTAAAAGATGGAATTGATG+TGG - chr7_1:33215489-33215508 None:intergenic 25.0%
! TAATAGCAATTGAAGTTCAT+AGG - chr7_1:33215577-33215596 None:intergenic 25.0%
! TAATTAGGAAAAGATAATGC+TGG + chr7_1:33215865-33215884 Msa1016490:intron 25.0%
!!! ATAATGGCTTATTTTTGGTT+TGG + chr7_1:33215925-33215944 Msa1016490:intron 25.0%
!!! TATTTTTGGTTTGGTACATT+AGG + chr7_1:33215934-33215953 Msa1016490:intron 25.0%
! TTAGGTTTAAAAGATATCCT+TGG + chr7_1:33215952-33215971 Msa1016490:intron 25.0%
! ATCACATTATATCATGTCAA+GGG - chr7_1:33216165-33216184 None:intergenic 25.0%
! TACTTATCAGTCTATGTTAT+GGG - chr7_1:33216257-33216276 None:intergenic 25.0%
! TTACTTATCAGTCTATGTTA+TGG - chr7_1:33216258-33216277 None:intergenic 25.0%
! GATACTCTAATCTAATATCA+AGG - chr7_1:33216433-33216452 None:intergenic 25.0%
! ACTACTAATGTAAAACACAT+AGG + chr7_1:33216491-33216510 Msa1016490:intron 25.0%
!!! GTTGATTTATGTCTTTTTCT+TGG - chr7_1:33216606-33216625 None:intergenic 25.0%
!!! TTTTCGTAATTGAAAGTACT+TGG - chr7_1:33216638-33216657 None:intergenic 25.0%
! CTTAACATGTGTTTATAAGT+GGG + chr7_1:33216825-33216844 Msa1016490:intron 25.0%
! TTAACATGTGTTTATAAGTG+GGG + chr7_1:33216826-33216845 Msa1016490:intron 25.0%
! TTCATGCTATATTAATTGAC+CGG - chr7_1:33218696-33218715 None:intergenic 25.0%
!! CTTCTAAGAGTTTCTTAAAT+AGG + chr7_1:33217359-33217378 Msa1016490:intron 25.0%
! ATACTTTGTTGGACAAATAT+TGG - chr7_1:33217421-33217440 None:intergenic 25.0%
! AATTTGTGAAGATACTTTGT+TGG - chr7_1:33217432-33217451 None:intergenic 25.0%
!!! GAGATTTAAGCTTTTGAAAT+TGG - chr7_1:33217520-33217539 None:intergenic 25.0%
!!! TAGTCCATTAAAGTTGTTTT+TGG - chr7_1:33217583-33217602 None:intergenic 25.0%
! TGAACTGAAAATTGACAATT+TGG + chr7_1:33217605-33217624 Msa1016490:intron 25.0%
! GAACTGAAAATTGACAATTT+GGG + chr7_1:33217606-33217625 Msa1016490:intron 25.0%
! TTTATCAAGAACTTTGTCAT+GGG - chr7_1:33217637-33217656 None:intergenic 25.0%
! TTGTTCATTAAGAATGTTCT+TGG - chr7_1:33217687-33217706 None:intergenic 25.0%
!!! CACTATTTTTTTCATATCCT+TGG + chr7_1:33217707-33217726 Msa1016490:intron 25.0%
! GGATAATGAACTTATTTGTA+AGG - chr7_1:33217829-33217848 None:intergenic 25.0%
! ATGAAATTCCTTCTATTTAC+TGG + chr7_1:33218113-33218132 Msa1016490:intron 25.0%
!!! TTTTTTTTTTGCAGTATCCT+TGG - chr7_1:33218186-33218205 None:intergenic 25.0%
! TCTCTTAAACATTACAATAG+TGG - chr7_1:33218365-33218384 None:intergenic 25.0%
! ATACTTTGTTGGACAAAAAT+TGG + chr7_1:33218483-33218502 Msa1016490:intron 25.0%
! TTAATCTAGTCTATGAAATG+TGG + chr7_1:33218588-33218607 Msa1016490:intron 25.0%
! TAATCTAGTCTATGAAATGT+GGG + chr7_1:33218589-33218608 Msa1016490:intron 25.0%
! TTGGATTTAAAGAATTGGTT+AGG - chr7_1:33218751-33218770 None:intergenic 25.0%
! TAACCAATTCTTTAAATCCA+AGG + chr7_1:33218750-33218769 Msa1016490:intron 25.0%
! TAACCTTGGATTTAAAGAAT+TGG - chr7_1:33218756-33218775 None:intergenic 25.0%
!!! TTAAGTTCTTTTTTCCATAC+TGG - chr7_1:33219650-33219669 None:intergenic 25.0%
! GTATGGAAAAAAGAACTTAA+AGG + chr7_1:33219650-33219669 Msa1016490:intron 25.0%
! GTTTAAAAAAATCAGGATTC+AGG + chr7_1:33219735-33219754 Msa1016490:intron 25.0%
!!! TTTTTTTTTTTTGGGACAGA+AGG + chr7_1:33219781-33219800 Msa1016490:intron 25.0%
!!! GGTCAAGAATTTTTAAGATT+AGG + chr7_1:33219901-33219920 Msa1016490:intron 25.0%
!!! AATTTTTAAGATTAGGTGAC+AGG + chr7_1:33219908-33219927 Msa1016490:intron 25.0%
! CTTAACTGTCAAGTATATTA+TGG - chr7_1:33220137-33220156 None:intergenic 25.0%
! GAACTAATAACTGTGATTAA+AGG - chr7_1:33220289-33220308 None:intergenic 25.0%
!! CTTATTTCCATAAGCTTTTT+AGG + chr7_1:33220484-33220503 Msa1016490:intron 25.0%
! TCAAACTATTTATCCGAATA+TGG + chr7_1:33220629-33220648 Msa1016490:intron 25.0%
! TGATTTATTATGTTTGCAAG+AGG + chr7_1:33220908-33220927 Msa1016490:three_prime_UTR 25.0%
! GATTTATTATGTTTGCAAGA+GGG + chr7_1:33220909-33220928 Msa1016490:three_prime_UTR 25.0%
! ATTTATTATGTTTGCAAGAG+GGG + chr7_1:33220910-33220929 Msa1016490:three_prime_UTR 25.0%
! ATTTGTCAACTAAGTTATAC+AGG - chr7_1:33221069-33221088 None:intergenic 25.0%
!! ACTTAGTTGACAAATCTTTT+AGG + chr7_1:33221074-33221093 Msa1016490:three_prime_UTR 25.0%
! ATCACATGAACTGAAAATAA+AGG + chr7_1:33221167-33221186 Msa1016490:three_prime_UTR 25.0%
! AGCTCATTTTCATCAATCAT+TGG + chr7_1:33208392-33208411 Msa1016490:intron 30.0%
!! TCATTGTTTAGAGTATCGTT+CGG + chr7_1:33208557-33208576 Msa1016490:intron 30.0%
!!! GTTTCTTCTCTAGTTTTTCT+AGG - chr7_1:33208612-33208631 None:intergenic 30.0%
!!! TATATTTTTCGGGTGTGAAT+TGG + chr7_1:33208677-33208696 Msa1016490:intron 30.0%
! TAATGTTAAATCTCTAGAGG+GGG - chr7_1:33208749-33208768 None:intergenic 30.0%
! GTAATGTTAAATCTCTAGAG+GGG - chr7_1:33208750-33208769 None:intergenic 30.0%
CAGTAATGTTAAATCTCTAG+AGG - chr7_1:33208752-33208771 None:intergenic 30.0%
AAAACTGATTATGACACGTT+TGG - chr7_1:33209131-33209150 None:intergenic 30.0%
TACGTGATTTCTTGTATGTT+TGG - chr7_1:33209166-33209185 None:intergenic 30.0%
TTCCAATTTATCTATTGCAG+AGG + chr7_1:33209384-33209403 Msa1016490:intron 30.0%
TCCAATTTATCTATTGCAGA+GGG + chr7_1:33209385-33209404 Msa1016490:intron 30.0%
TTAAATCTTGGTTATGTTGC+AGG + chr7_1:33209761-33209780 Msa1016490:intron 30.0%
TAAATCTTGGTTATGTTGCA+GGG + chr7_1:33209762-33209781 Msa1016490:intron 30.0%
GATGAATAGAGAGATAAATC+AGG - chr7_1:33209850-33209869 None:intergenic 30.0%
TTGTGTTTGTAATAAGGAAC+TGG + chr7_1:33210001-33210020 Msa1016490:intron 30.0%
!! TAGATGTCTGCTTTTGTTAA+TGG + chr7_1:33210109-33210128 Msa1016490:intron 30.0%
!! AGATGTCTGCTTTTGTTAAT+GGG + chr7_1:33210110-33210129 Msa1016490:intron 30.0%
! AACACTATTTCTTCATACGA+AGG - chr7_1:33210154-33210173 None:intergenic 30.0%
AAGCATGTACCATAGTATTA+TGG - chr7_1:33210329-33210348 None:intergenic 30.0%
TGCTTTGATAAATGTGCTAA+TGG + chr7_1:33210344-33210363 Msa1016490:intron 30.0%
!!! TTGTATTTTGATGCAGTCTT+TGG + chr7_1:33210480-33210499 Msa1016490:intron 30.0%
GCATTAAGAATGCTTGATAT+TGG + chr7_1:33210647-33210666 Msa1016490:intron 30.0%
TTCTGTTCAGTTAATCTGTT+AGG + chr7_1:33210815-33210834 Msa1016490:intron 30.0%
TCTGTTCAGTTAATCTGTTA+GGG + chr7_1:33210816-33210835 Msa1016490:intron 30.0%
TAATTCACACATCGATAACT+AGG + chr7_1:33210846-33210865 Msa1016490:intron 30.0%
! TATAGGTGTTGTAATTCAAC+TGG - chr7_1:33210895-33210914 None:intergenic 30.0%
GGATAAAATTAGGCATTCAT+GGG - chr7_1:33210985-33211004 None:intergenic 30.0%
TAGAATTAGGTATGTGTTGT+TGG - chr7_1:33211029-33211048 None:intergenic 30.0%
! TAGAAGATGATGATTTTGGA+GGG - chr7_1:33211062-33211081 None:intergenic 30.0%
! TTAGAAGATGATGATTTTGG+AGG - chr7_1:33211063-33211082 None:intergenic 30.0%
! GTGTTAGAAGATGATGATTT+TGG - chr7_1:33211066-33211085 None:intergenic 30.0%
CTTTGTTGAAATTCACTTGA+TGG + chr7_1:33211093-33211112 Msa1016490:intron 30.0%
! TGAAATTCACTTGATGGTAT+TGG + chr7_1:33211099-33211118 Msa1016490:intron 30.0%
TTTGTTGGATACAAGGATAA+AGG - chr7_1:33211152-33211171 None:intergenic 30.0%
GACTGAAAAATGTAACATGA+AGG - chr7_1:33211212-33211231 None:intergenic 30.0%
! GTCTTTTTACTCAATCAAGT+TGG + chr7_1:33211229-33211248 Msa1016490:intron 30.0%
!! GATAGTGAGTTGATTCATAA+CGG + chr7_1:33211433-33211452 Msa1016490:intron 30.0%
!! ATAGTGAGTTGATTCATAAC+GGG + chr7_1:33211434-33211453 Msa1016490:intron 30.0%
! TTAAGAAAGGAAAGTGTATG+TGG + chr7_1:33211658-33211677 Msa1016490:intron 30.0%
! TTTCTGAATGGACTTAAAAG+AGG - chr7_1:33211799-33211818 None:intergenic 30.0%
TGTAACTAGTATAACGTTTC+TGG - chr7_1:33211823-33211842 None:intergenic 30.0%
ATGGACTTTAGTTATTTGAG+GGG - chr7_1:33211857-33211876 None:intergenic 30.0%
CATGGACTTTAGTTATTTGA+GGG - chr7_1:33211858-33211877 None:intergenic 30.0%
TCATGGACTTTAGTTATTTG+AGG - chr7_1:33211859-33211878 None:intergenic 30.0%
AACTAAAGTCCATGAAAGAA+AGG + chr7_1:33211864-33211883 Msa1016490:intron 30.0%
AGGACAGAGAAATAAAAGAT+AGG + chr7_1:33212053-33212072 Msa1016490:intron 30.0%
!! TACCAACACTTTTTATCAGT+AGG + chr7_1:33212931-33212950 Msa1016490:intron 30.0%
!! TGATGTATATATGGTGTCAT+AGG + chr7_1:33212992-33213011 Msa1016490:intron 30.0%
TTATAGCTGCGTTAATCATT+AGG + chr7_1:33213048-33213067 Msa1016490:intron 30.0%
TATAGCTGCGTTAATCATTA+GGG + chr7_1:33213049-33213068 Msa1016490:intron 30.0%
ATTAAATCTAACTAGAGCCA+AGG - chr7_1:33213133-33213152 None:intergenic 30.0%
GTTAGTGGAAAAGACTTATT+TGG + chr7_1:33213464-33213483 Msa1016490:intron 30.0%
! TGTTGTTGTTATGTAAGTTC+AGG - chr7_1:33213491-33213510 None:intergenic 30.0%
TCTTTGATAGAACATTATGG+CGG - chr7_1:33213569-33213588 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr7_1:33213572-33213591 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr7_1:33213576-33213595 Msa1016490:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr7_1:33213611-33213630 Msa1016490:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr7_1:33213633-33213652 Msa1016490:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr7_1:33213762-33213781 Msa1016490:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr7_1:33214094-33214113 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr7_1:33214097-33214116 Msa1016490:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr7_1:33214169-33214188 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr7_1:33214348-33214367 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr7_1:33214409-33214428 Msa1016490:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr7_1:33214567-33214586 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr7_1:33214573-33214592 None:intergenic 30.0%
TAAACCATGGTTGTCAAAAT+CGG - chr7_1:33215108-33215127 None:intergenic 30.0%
ATCAATTCACTACTTCATGT+TGG - chr7_1:33215148-33215167 None:intergenic 30.0%
!! TGAAGTAGTGAATTGATTTG+TGG + chr7_1:33215151-33215170 Msa1016490:intron 30.0%
!!! TGGCCCAATTTTTTCTTTTA+AGG - chr7_1:33215226-33215245 None:intergenic 30.0%
! GCTTTTTGTGCAAATATGAT+TGG - chr7_1:33215246-33215265 None:intergenic 30.0%
CGGCATATAAAATTGAAAGA+CGG + chr7_1:33215814-33215833 Msa1016490:CDS 30.0%
GGCATATAAAATTGAAAGAC+GGG + chr7_1:33215815-33215834 Msa1016490:CDS 30.0%
AAACTATGTGGAATGAGATA+TGG - chr7_1:33216044-33216063 None:intergenic 30.0%
CAGCTACTCTTTAATGTTAT+GGG - chr7_1:33216082-33216101 None:intergenic 30.0%
ACAGCTACTCTTTAATGTTA+TGG - chr7_1:33216083-33216102 None:intergenic 30.0%
CATCACATTATATCATGTCA+AGG - chr7_1:33216166-33216185 None:intergenic 30.0%
TCAAGGTTTAGCATATGAAA+TGG + chr7_1:33216193-33216212 Msa1016490:intron 30.0%
! GATATTAGATCAGAGTATCT+TGG + chr7_1:33216311-33216330 Msa1016490:intron 30.0%
ATCGCTAACGTAAAAAACAT+AGG + chr7_1:33216368-33216387 Msa1016490:intron 30.0%
!! TGAAAGTACTTGGTTTGTTT+AGG - chr7_1:33216628-33216647 None:intergenic 30.0%
TTTAGATCATTGGATCATAG+AGG - chr7_1:33216766-33216785 None:intergenic 30.0%
CCACTTATAAACACATGTTA+AGG - chr7_1:33216827-33216846 None:intergenic 30.0%
CCTTAACATGTGTTTATAAG+TGG + chr7_1:33216824-33216843 Msa1016490:intron 30.0%
TAACATGTGTTTATAAGTGG+GGG + chr7_1:33216827-33216846 Msa1016490:intron 30.0%
GATTCTTAGAAATTGTGGTT+GGG - chr7_1:33216895-33216914 None:intergenic 30.0%
AGATTCTTAGAAATTGTGGT+TGG - chr7_1:33216896-33216915 None:intergenic 30.0%
TTAAAGAATGAGTTACGCAA+CGG + chr7_1:33217164-33217183 Msa1016490:intron 30.0%
ATTCAATGATTGAAGATGTC+AGG - chr7_1:33218612-33218631 None:intergenic 30.0%
AAAAGGTGATTAGTGATCAA+TGG - chr7_1:33217489-33217508 None:intergenic 30.0%
!!! GATCACTAATCACCTTTTTT+TGG + chr7_1:33217491-33217510 Msa1016490:intron 30.0%
TGAAATTGGACTCCAAAAAA+AGG - chr7_1:33217506-33217525 None:intergenic 30.0%
TCTCTTGAACATTACAATAG+TGG + chr7_1:33217536-33217555 Msa1016490:intron 30.0%
GCAACCAAAAACAACTTTAA+TGG + chr7_1:33217576-33217595 Msa1016490:intron 30.0%
GTTTATCAAGAACTTTGTCA+TGG - chr7_1:33218260-33218279 None:intergenic 30.0%
!!! ATTTTTTTCATATCCTTGGC+TGG + chr7_1:33217711-33217730 Msa1016490:intron 30.0%
TTTAATGTATGCACAACACA+TGG + chr7_1:33217756-33217775 Msa1016490:intron 30.0%
GTATTACAACCTCCATAAAT+TGG + chr7_1:33217947-33217966 Msa1016490:intron 30.0%
TAGTATACACCAATTTATGG+AGG - chr7_1:33217959-33217978 None:intergenic 30.0%
CTCTAGTATACACCAATTTA+TGG - chr7_1:33217962-33217981 None:intergenic 30.0%
GGCAACATGTTTAATTATTG+AGG + chr7_1:33218090-33218109 Msa1016490:intron 30.0%
TTCTTTGATCACCCAAATTA+CGG + chr7_1:33218227-33218246 Msa1016490:intron 30.0%
GTTTATCAAGAACTTTGTCA+CGG + chr7_1:33218260-33218279 Msa1016490:intron 30.0%
TTTATCAAGAACTTTGTCAC+GGG + chr7_1:33218261-33218280 Msa1016490:intron 30.0%
TTCATTCACTCCATTAAAGT+TGG + chr7_1:33218312-33218331 Msa1016490:intron 30.0%
ATTTGTGAAGGATACTTTGT+TGG + chr7_1:33218472-33218491 Msa1016490:intron 30.0%
!! CTTCTAAGAGTATCATAAAC+AGG - chr7_1:33218545-33218564 None:intergenic 30.0%
ATTCAATGATTGAAGATGTC+AGG + chr7_1:33218612-33218631 Msa1016490:intron 30.0%
TTAAAGAATTGGTTAGGCAA+CGG - chr7_1:33218745-33218764 None:intergenic 30.0%
! TCTTGTTGATAGAGATAAGA+TGG + chr7_1:33218985-33219004 Msa1016490:intron 30.0%
ATAAGATGGATCCAAAAACA+TGG + chr7_1:33218999-33219018 Msa1016490:intron 30.0%
!! AGTTTCATCTTGATGATGTT+GGG - chr7_1:33219154-33219173 None:intergenic 30.0%
!! TAGTTTCATCTTGATGATGT+TGG - chr7_1:33219155-33219174 None:intergenic 30.0%
!! TCCTATGTTTTTAACAGTAG+CGG + chr7_1:33219438-33219457 Msa1016490:intron 30.0%
ACTGTTGTTCTACAATGTTA+TGG + chr7_1:33219535-33219554 Msa1016490:intron 30.0%
AATGTTATGGACATATCTCA+TGG + chr7_1:33219548-33219567 Msa1016490:intron 30.0%
CTCAGACAAAATTGTACATT+TGG - chr7_1:33219708-33219727 None:intergenic 30.0%
AAAATTCTTGACCTGATAAC+TGG - chr7_1:33219894-33219913 None:intergenic 30.0%
GATTTCAGTATGTAATCTGT+TGG + chr7_1:33220046-33220065 Msa1016490:intron 30.0%
TGGAAGATGTTTGATTACTT+TGG - chr7_1:33220117-33220136 None:intergenic 30.0%
!! CTTGACAGTTAAGTATTGAA+TGG + chr7_1:33220144-33220163 Msa1016490:intron 30.0%
AAACGATGCAAAGTTCAATA+TGG - chr7_1:33220321-33220340 None:intergenic 30.0%
AATCTTACAAGTGCTTAAGT+CGG - chr7_1:33220410-33220429 None:intergenic 30.0%
! AAGCACTTGTAAGATTGTTT+TGG + chr7_1:33220414-33220433 Msa1016490:intron 30.0%
AAGCTATCCTAAAAAGCTTA+TGG - chr7_1:33220494-33220513 None:intergenic 30.0%
! AAAGCTTTTAAATCAGTGCA+AGG - chr7_1:33220655-33220674 None:intergenic 30.0%
!! GTCTCTAAAATTAGCAACTA+TGG + chr7_1:33220772-33220791 Msa1016490:CDS 30.0%
CTGAAGCAAAGTTTCTTAAA+TGG - chr7_1:33220803-33220822 None:intergenic 30.0%
AAGGATGCATCTAGAAAAAA+GGG - chr7_1:33220888-33220907 None:intergenic 30.0%
AAAGGATGCATCTAGAAAAA+AGG - chr7_1:33220889-33220908 None:intergenic 30.0%
AACTAAGTTATACAGGTGTT+TGG - chr7_1:33221062-33221081 None:intergenic 30.0%
CGTCTCGGATATTTATAATT+CGG - chr7_1:33221204-33221223 None:intergenic 30.0%
CAATGAAGTAGAAAAAGGTA+TGG - chr7_1:33221242-33221261 None:intergenic 30.0%
! CATACCTTTTTCTACTTCAT+TGG + chr7_1:33221240-33221259 Msa1016490:three_prime_UTR 30.0%
CAAACCAATGAAGTAGAAAA+AGG - chr7_1:33221247-33221266 None:intergenic 30.0%
AGTTTATAGTCTATCGTCAA+TGG + chr7_1:33221277-33221296 Msa1016490:three_prime_UTR 30.0%
GATAAACGGTTTCACATCTA+GGG - chr7_1:33208262-33208281 None:intergenic 35.0%
!!! TTTTTTGGTAGTGTAGGACT+TGG - chr7_1:33208299-33208318 None:intergenic 35.0%
!!! TGAAGGTTTTTTGGTAGTGT+AGG - chr7_1:33208305-33208324 None:intergenic 35.0%
AATTTGAGAGAAACGAGAAG+TGG - chr7_1:33208358-33208377 None:intergenic 35.0%
!! CATTGTTTAGAGTATCGTTC+GGG + chr7_1:33208558-33208577 Msa1016490:intron 35.0%
! CTAGGTTCAAATCTAGAACT+AGG - chr7_1:33208779-33208798 None:intergenic 35.0%
!! CTAGTTCTAGATTTGAACCT+AGG + chr7_1:33208777-33208796 Msa1016490:intron 35.0%
ACTTAGGATGAAATGGTAAG+GGG - chr7_1:33208826-33208845 None:intergenic 35.0%
CACTTAGGATGAAATGGTAA+GGG - chr7_1:33208827-33208846 None:intergenic 35.0%
TCACTTAGGATGAAATGGTA+AGG - chr7_1:33208828-33208847 None:intergenic 35.0%
CAAGATCACTTAGGATGAAA+TGG - chr7_1:33208833-33208852 None:intergenic 35.0%
CATTTCATCCTAAGTGATCT+TGG + chr7_1:33208831-33208850 Msa1016490:intron 35.0%
TATCTCTACCAAGATCACTT+AGG - chr7_1:33208842-33208861 None:intergenic 35.0%
!! TATTTGTTTCTGTTGAGTGC+AGG + chr7_1:33209250-33209269 Msa1016490:intron 35.0%
CTTCTGTTTGGAAAGATCAA+AGG + chr7_1:33209317-33209336 Msa1016490:CDS 35.0%
ACCCTCTGCAATAGATAAAT+TGG - chr7_1:33209389-33209408 None:intergenic 35.0%
TCACATCCAGTAATTACTTC+TGG + chr7_1:33209424-33209443 Msa1016490:CDS 35.0%
TGATAAATGTGCTAATGGCT+TGG + chr7_1:33210349-33210368 Msa1016490:intron 35.0%
CAATGTCAAAGCAACAATAC+AGG - chr7_1:33210463-33210482 None:intergenic 35.0%
! CAACTCTTTAACTTCTTCAC+TGG - chr7_1:33210515-33210534 None:intergenic 35.0%
GTGAAGAAGTTAAAGAGTTG+CGG + chr7_1:33210515-33210534 Msa1016490:CDS 35.0%
! TCCTGAAATCTGAAGTTGAA+AGG + chr7_1:33210551-33210570 Msa1016490:CDS 35.0%
TCCTTTCAACTTCAGATTTC+AGG - chr7_1:33210555-33210574 None:intergenic 35.0%
! GAAATCTGAAGTTGAAAGGA+TGG + chr7_1:33210555-33210574 Msa1016490:CDS 35.0%
!! CAGATGGTGTTTTTGTCTTT+CGG - chr7_1:33210737-33210756 None:intergenic 35.0%
TCGAATGTGTAATTTAGTGC+TGG - chr7_1:33210769-33210788 None:intergenic 35.0%
CTGAACAGAAAAACGAACAT+TGG - chr7_1:33210805-33210824 None:intergenic 35.0%
GGGATAAAATTAGGCATTCA+TGG - chr7_1:33210986-33211005 None:intergenic 35.0%
GGGTTGTGAGAATTAGAATT+AGG - chr7_1:33211042-33211061 None:intergenic 35.0%
ATGAAGGAAAAAAAGGCTCA+TGG - chr7_1:33211196-33211215 None:intergenic 35.0%
GATGAATAGTGATAAGTCGT+CGG + chr7_1:33211355-33211374 Msa1016490:intron 35.0%
TTTGCACTGCAGAAAATTGT+TGG - chr7_1:33211505-33211524 None:intergenic 35.0%
TTTCTGCAGTGCAAAACTAT+TGG + chr7_1:33211510-33211529 Msa1016490:intron 35.0%
TTCTGCAGTGCAAAACTATT+GGG + chr7_1:33211511-33211530 Msa1016490:intron 35.0%
GAATAGAATCTGTGAGATTG+TGG + chr7_1:33211557-33211576 Msa1016490:intron 35.0%
!! TGTAAAAGAGAAAGTATCGC+AGG - chr7_1:33211591-33211610 None:intergenic 35.0%
ATATCAAGAGAGCTGCTATA+TGG - chr7_1:33211717-33211736 None:intergenic 35.0%
CTTAAAAGAGGTCATTGATC+AGG - chr7_1:33211787-33211806 None:intergenic 35.0%
!!! AACGTTTCTGGTTTTCTGAA+TGG - chr7_1:33211811-33211830 None:intergenic 35.0%
! CACTCTTTTCCTTTCTTTCA+TGG - chr7_1:33211876-33211895 None:intergenic 35.0%
CATGAAAGAAAGGAAAAGAG+TGG + chr7_1:33211874-33211893 Msa1016490:intron 35.0%
TTTAACCCTGTGGTTGTTAA+AGG + chr7_1:33212011-33212030 Msa1016490:intron 35.0%
TTTCACCTTTAACAACCACA+GGG - chr7_1:33212019-33212038 None:intergenic 35.0%
ATTTCACCTTTAACAACCAC+AGG - chr7_1:33212020-33212039 None:intergenic 35.0%
GGTTGTTAAAGGTGAAATAG+AGG + chr7_1:33212022-33212041 Msa1016490:intron 35.0%
ACCTCAAAGTTGCTAAGAAA+GGG + chr7_1:33212141-33212160 Msa1016490:intron 35.0%
!! CCATTTTTGACGGATATTAG+TGG - chr7_1:33212195-33212214 None:intergenic 35.0%
CCACTAATATCCGTCAAAAA+TGG + chr7_1:33212192-33212211 Msa1016490:intron 35.0%
ATATGCTAGTGACTGTTAGT+GGG + chr7_1:33212246-33212265 Msa1016490:intron 35.0%
TATCTTGCTCCTATTTCAAG+TGG + chr7_1:33212355-33212374 Msa1016490:intron 35.0%
TACAGCATTCCACTTGAAAT+AGG - chr7_1:33212367-33212386 None:intergenic 35.0%
! CTTTTGTGATGTGCTTGTTT+AGG - chr7_1:33212631-33212650 None:intergenic 35.0%
GAGAACTCTTAAAACGTGTT+TGG - chr7_1:33212896-33212915 None:intergenic 35.0%
! CACCTACTGATAAAAAGTGT+TGG - chr7_1:33212936-33212955 None:intergenic 35.0%
!! TGTATATATGGTGTCATAGG+AGG + chr7_1:33212995-33213014 Msa1016490:intron 35.0%
!! GTATATATGGTGTCATAGGA+GGG + chr7_1:33212996-33213015 Msa1016490:intron 35.0%
! AACAGGAATAAGGTATTCCT+TGG + chr7_1:33213113-33213132 Msa1016490:intron 35.0%
TTATGTTGAAGGAGAAGACT+AGG + chr7_1:33213431-33213450 Msa1016490:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr7_1:33213592-33213611 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr7_1:33213604-33213623 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7_1:33213688-33213707 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr7_1:33213691-33213710 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr7_1:33213692-33213711 Msa1016490:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr7_1:33213744-33213763 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr7_1:33213749-33213768 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr7_1:33213769-33213788 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr7_1:33213821-33213840 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr7_1:33213956-33213975 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr7_1:33213960-33213979 Msa1016490:intron 35.0%
TACATCATCGTATTCAAGCT+GGG - chr7_1:33214034-33214053 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr7_1:33214067-33214086 Msa1016490:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - chr7_1:33214095-33214114 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr7_1:33214096-33214115 Msa1016490:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr7_1:33214098-33214117 Msa1016490:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr7_1:33214109-33214128 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr7_1:33214160-33214179 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr7_1:33214161-33214180 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG - chr7_1:33214189-33214208 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr7_1:33214302-33214321 Msa1016490:intron 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr7_1:33214410-33214429 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr7_1:33214478-33214497 Msa1016490:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr7_1:33214667-33214686 None:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr7_1:33214668-33214687 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr7_1:33214693-33214712 None:intergenic 35.0%
AAACCATGGTTGTCAAAATC+GGG - chr7_1:33215107-33215126 None:intergenic 35.0%
! CAACCATGGTTTAAAGTAGT+AGG + chr7_1:33215115-33215134 Msa1016490:intron 35.0%
ACACCTACTACTTTAAACCA+TGG - chr7_1:33215121-33215140 None:intergenic 35.0%
AATAGAATCGCAACAATAGC+TGG - chr7_1:33215199-33215218 None:intergenic 35.0%
!!! CAATTGGTTGGTAGGATTTT+GGG - chr7_1:33215355-33215374 None:intergenic 35.0%
AAAATCCTACCAACCAATTG+CGG + chr7_1:33215355-33215374 Msa1016490:intron 35.0%
AAGATGGAATTGATGTGGTT+CGG - chr7_1:33215484-33215503 None:intergenic 35.0%
AAGAGCAATTCTTACATGGA+AGG + chr7_1:33215658-33215677 Msa1016490:CDS 35.0%
CAAATGTTGAGCCATAACAT+TGG + chr7_1:33215704-33215723 Msa1016490:intron 35.0%
CATGAACACAACCAATGTTA+TGG - chr7_1:33215718-33215737 None:intergenic 35.0%
TATGTTTATCACAGACAAGC+AGG + chr7_1:33215765-33215784 Msa1016490:intron 35.0%
AATCCGAAATGTGATTCAGT+CGG + chr7_1:33215794-33215813 Msa1016490:CDS 35.0%
TATAAAATTGAAAGACGGGC+AGG + chr7_1:33215819-33215838 Msa1016490:CDS 35.0%
CAATGAAATATGCTGGCATT+GGG + chr7_1:33215889-33215908 Msa1016490:intron 35.0%
! TAAGCCATTATCAAAAGCAC+AGG - chr7_1:33215916-33215935 None:intergenic 35.0%
! TGGTTAATTTCACTAGCTTC+TGG + chr7_1:33216131-33216150 Msa1016490:intron 35.0%
ATGTTATGGGTGTTTAGACA+GGG - chr7_1:33216244-33216263 None:intergenic 35.0%
TATGTTATGGGTGTTTAGAC+AGG - chr7_1:33216245-33216264 None:intergenic 35.0%
TTTCACAATGTGTAGTGACT+AGG - chr7_1:33216691-33216710 None:intergenic 35.0%
TGAAAACCAACATCTAAACC+TGG + chr7_1:33216706-33216725 Msa1016490:intron 35.0%
TGGAGATGAGTTTAGATCAT+TGG - chr7_1:33216776-33216795 None:intergenic 35.0%
AATGATTGAAGATGTCAGGA+AGG - chr7_1:33218616-33218635 None:intergenic 35.0%
CATCTTCAATCATTGAATCC+CGG + chr7_1:33217293-33217312 Msa1016490:intron 35.0%
TCATCTAGTCTATGAAATGC+CGG - chr7_1:33217315-33217334 None:intergenic 35.0%
GGACAAATATTGGTGGAAAA+AGG - chr7_1:33217411-33217430 None:intergenic 35.0%
CTTTGTTGGACAAATATTGG+TGG - chr7_1:33217418-33217437 None:intergenic 35.0%
TGATCAATGGTCTTCTTACA+AGG - chr7_1:33217476-33217495 None:intergenic 35.0%
CATGGTGTCTAGTAAATAGA+AGG + chr7_1:33217774-33217793 Msa1016490:intron 35.0%
TGAACTTATTTGTAAGGCAG+CGG - chr7_1:33217823-33217842 None:intergenic 35.0%
TCATCTTGTAATTATGGTGG+AGG - chr7_1:33217882-33217901 None:intergenic 35.0%
TCCACCATAATTACAAGATG+AGG + chr7_1:33217881-33217900 Msa1016490:intron 35.0%
AGAGCCTCATCTTGTAATTA+TGG - chr7_1:33217888-33217907 None:intergenic 35.0%
CTACTTGCACATCATTTGAA+GGG - chr7_1:33218045-33218064 None:intergenic 35.0%
ACTACTTGCACATCATTTGA+AGG - chr7_1:33218046-33218065 None:intergenic 35.0%
GAATAATGCACCTGTTTGTA+AGG + chr7_1:33218069-33218088 Msa1016490:intron 35.0%
AAACATGTTGCCTTACAAAC+AGG - chr7_1:33218082-33218101 None:intergenic 35.0%
CATAGAGTCCAGTAAATAGA+AGG - chr7_1:33218124-33218143 None:intergenic 35.0%
GAACTGAAAACTGGCAATTT+GGG - chr7_1:33218295-33218314 None:intergenic 35.0%
TGAACTGAAAACTGGCAATT+TGG - chr7_1:33218296-33218315 None:intergenic 35.0%
!! CACTCCATTAAAGTTGGTTT+TGG + chr7_1:33218318-33218337 Msa1016490:intron 35.0%
GCAACCAAAACCAACTTTAA+TGG - chr7_1:33218325-33218344 None:intergenic 35.0%
GAAGACTAAACTCCAACAAA+TGG + chr7_1:33218396-33218415 Msa1016490:intron 35.0%
CTCACTTAATCACCATTTGT+TGG - chr7_1:33218411-33218430 None:intergenic 35.0%
AATGGTGATTAAGTGAGCAA+TGG + chr7_1:33218414-33218433 Msa1016490:intron 35.0%
! CAAGGATGATGATGTTCAAA+AGG + chr7_1:33218445-33218464 Msa1016490:intron 35.0%
CTTTGTTGGACAAAAATTGG+TGG + chr7_1:33218486-33218505 Msa1016490:intron 35.0%
AATGATTGAAGATGTCAGGA+AGG + chr7_1:33218616-33218635 Msa1016490:intron 35.0%
TCAAGAGTCACTCTTTCATT+AGG + chr7_1:33218670-33218689 Msa1016490:intron 35.0%
ATATTCACTTTCCCCTACAT+CGG - chr7_1:33218914-33218933 None:intergenic 35.0%
! AGTACAAACCACCATGTTTT+TGG - chr7_1:33219013-33219032 None:intergenic 35.0%
! AAAACATGGTGGTTTGTACT+TGG + chr7_1:33219013-33219032 Msa1016490:intron 35.0%
AAGCTTTCACAACATGAACA+AGG - chr7_1:33219086-33219105 None:intergenic 35.0%
CTAAATTTCGACTTCTGTCA+AGG + chr7_1:33219121-33219140 Msa1016490:intron 35.0%
!! GTTTCATCTTGATGATGTTG+GGG - chr7_1:33219153-33219172 None:intergenic 35.0%
ACTAAAATGTGTGATGTCAC+TGG + chr7_1:33219171-33219190 Msa1016490:intron 35.0%
ATCATCCAATGATCCAAACT+TGG - chr7_1:33219199-33219218 None:intergenic 35.0%
TTTGGATCATTGGATGATAG+TGG + chr7_1:33219201-33219220 Msa1016490:intron 35.0%
! AGAGCATGATTTTCTCAATG+TGG + chr7_1:33219263-33219282 Msa1016490:intron 35.0%
! GAGCATGATTTTCTCAATGT+GGG + chr7_1:33219264-33219283 Msa1016490:intron 35.0%
! AGCATGATTTTCTCAATGTG+GGG + chr7_1:33219265-33219284 Msa1016490:intron 35.0%
!!! TGAAAGTACTCGGTTTGTTT+TGG + chr7_1:33219337-33219356 Msa1016490:intron 35.0%
!!! GAAAGTACTCGGTTTGTTTT+GGG + chr7_1:33219338-33219357 Msa1016490:intron 35.0%
!!! AAAGTACTCGGTTTGTTTTG+GGG + chr7_1:33219339-33219358 Msa1016490:intron 35.0%
ACCGCTACTGTTAAAAACAT+AGG - chr7_1:33219442-33219461 None:intergenic 35.0%
CAGGGTTGTGAAGTTAAATT+GGG + chr7_1:33219496-33219515 Msa1016490:intron 35.0%
!!! TTTTTTTTTGGGACAGAAGG+TGG + chr7_1:33219784-33219803 Msa1016490:intron 35.0%
!!! TTTTTTTTGGGACAGAAGGT+GGG + chr7_1:33219785-33219804 Msa1016490:intron 35.0%
AGAAGGTGGGGAAATTAAAA+AGG + chr7_1:33219798-33219817 Msa1016490:intron 35.0%
GAAGGTGGGGAAATTAAAAA+GGG + chr7_1:33219799-33219818 Msa1016490:intron 35.0%
AATTAAAAAGGGTGAGCGTT+TGG + chr7_1:33219810-33219829 Msa1016490:intron 35.0%
AGCACTCGCTTAATTATCAA+AGG - chr7_1:33219934-33219953 None:intergenic 35.0%
TCAATAAAGAGAACTGCTAG+TGG - chr7_1:33219981-33220000 None:intergenic 35.0%
GCATCGTTTAACAACTATGA+AGG + chr7_1:33220332-33220351 Msa1016490:intron 35.0%
ACAAGATCAGCATATTGTGT+TGG - chr7_1:33220682-33220701 None:intergenic 35.0%
CTTTACATCAGAAGCAAGTT+GGG - chr7_1:33220725-33220744 None:intergenic 35.0%
AAAGCAAGAAAAGAGATCCT+TGG + chr7_1:33220741-33220760 Msa1016490:CDS 35.0%
TTGCTTCAGCATGCTATAAA+TGG + chr7_1:33220814-33220833 Msa1016490:three_prime_UTR 35.0%
! GATGTACAAGTTTTCTGATG+AGG + chr7_1:33220836-33220855 Msa1016490:three_prime_UTR 35.0%
ATGCATCTAGAAAAAAGGGA+GGG - chr7_1:33220884-33220903 None:intergenic 35.0%
CTCGGATATTTATAATTCGG+CGG - chr7_1:33221201-33221220 None:intergenic 35.0%
CTGATTATGTTGTTACGTCT+CGG - chr7_1:33221219-33221238 None:intergenic 35.0%
CGATAAACGGTTTCACATCT+AGG - chr7_1:33208263-33208282 None:intergenic 40.0%
CCAACAGCGTAATCGATAAA+CGG - chr7_1:33208276-33208295 None:intergenic 40.0%
GCTGAAATCTTTCGTTCTGT+TGG + chr7_1:33208512-33208531 Msa1016490:intron 40.0%
! CGTGTCATAATCAGTTTTCC+AGG + chr7_1:33209133-33209152 Msa1016490:intron 40.0%
! CATAATCAGTTTTCCAGGAG+TGG + chr7_1:33209138-33209157 Msa1016490:intron 40.0%
CTGTTGAGTGCAGGATTATT+TGG + chr7_1:33209259-33209278 Msa1016490:intron 40.0%
GTCTCAGTACAATGCTTATG+AGG + chr7_1:33209292-33209311 Msa1016490:CDS 40.0%
GCTTATGAGGAACTTCTGTT+TGG + chr7_1:33209305-33209324 Msa1016490:CDS 40.0%
! GCGTCTTTTTGTTAGTGAAG+AGG + chr7_1:33209814-33209833 Msa1016490:CDS 40.0%
TTTGTTAGTGAAGAGGTGAG+TGG + chr7_1:33209821-33209840 Msa1016490:intron 40.0%
TTGCAATTGTTATGGCAAGC+TGG - chr7_1:33210375-33210394 None:intergenic 40.0%
! ATCTGAAGTTGAAAGGATGG+AGG + chr7_1:33210558-33210577 Msa1016490:CDS 40.0%
CGAAAGACAAAAACACCATC+TGG + chr7_1:33210735-33210754 Msa1016490:intron 40.0%
ATGCTAATGTGCACGACATA+CGG + chr7_1:33210947-33210966 Msa1016490:intron 40.0%
GGAGTACGTGGGATAAAATT+AGG - chr7_1:33210995-33211014 None:intergenic 40.0%
!!! CGTTTTTTAGTGGAGTACGT+GGG - chr7_1:33211006-33211025 None:intergenic 40.0%
!!! GTGTTGTTGGCGTTTTTTAG+TGG - chr7_1:33211016-33211035 None:intergenic 40.0%
! GGGATTGTTTGTTGGATACA+AGG - chr7_1:33211159-33211178 None:intergenic 40.0%
GAAGATGAGGGATTGTTTGT+TGG - chr7_1:33211167-33211186 None:intergenic 40.0%
TCATGGTCGATTGAAGATGA+GGG - chr7_1:33211179-33211198 None:intergenic 40.0%
!! TGGCCTTAGCTCTAATTTAC+TGG + chr7_1:33211330-33211349 Msa1016490:intron 40.0%
!! GGCCTTAGCTCTAATTTACT+GGG + chr7_1:33211331-33211350 Msa1016490:intron 40.0%
CACCCAGTAAATTAGAGCTA+AGG - chr7_1:33211336-33211355 None:intergenic 40.0%
!! CATAACGGGATTTAGCTTTG+TGG + chr7_1:33211448-33211467 Msa1016490:intron 40.0%
GAAAGAAAGGAAAAGAGTGG+TGG + chr7_1:33211877-33211896 Msa1016490:intron 40.0%
TAGAGAATTGGTCAAAAGCC+TGG + chr7_1:33211921-33211940 Msa1016490:intron 40.0%
CAGGGTTAAAGAAACATCCT+AGG - chr7_1:33212001-33212020 None:intergenic 40.0%
AGGATGTTTCTTTAACCCTG+TGG + chr7_1:33212001-33212020 Msa1016490:intron 40.0%
GTGAAATAGAGGAAAGAGAG+AGG + chr7_1:33212033-33212052 Msa1016490:intron 40.0%
TGAGGTGACTCCAAAAAGTT+GGG - chr7_1:33212127-33212146 None:intergenic 40.0%
TTGAGGTGACTCCAAAAAGT+TGG - chr7_1:33212128-33212147 None:intergenic 40.0%
CACCTCAAAGTTGCTAAGAA+AGG + chr7_1:33212140-33212159 Msa1016490:intron 40.0%
TCCCTTTCTTAGCAACTTTG+AGG - chr7_1:33212145-33212164 None:intergenic 40.0%
!!! CATGTTGCAGCCATTTTTGA+CGG - chr7_1:33212205-33212224 None:intergenic 40.0%
CATATGCTAGTGACTGTTAG+TGG + chr7_1:33212245-33212264 Msa1016490:intron 40.0%
AAGAAGTGAGAAACAGTGAG+AGG - chr7_1:33212847-33212866 None:intergenic 40.0%
GAGTTCTCCAATGAAGAGTT+TGG + chr7_1:33212908-33212927 Msa1016490:intron 40.0%
GTTGGTACCAAACTCTTCAT+TGG - chr7_1:33212918-33212937 None:intergenic 40.0%
!! TAAGAGCATTGTAACGACTC+TGG + chr7_1:33212962-33212981 Msa1016490:intron 40.0%
! CATTGTAACGACTCTGGTTT+GGG + chr7_1:33212968-33212987 Msa1016490:intron 40.0%
GGTTTGGGCTGATGTATATA+TGG + chr7_1:33212983-33213002 Msa1016490:intron 40.0%
TGTTTGATGCCACAGAAGTT+AGG - chr7_1:33213097-33213116 None:intergenic 40.0%
TAACTTCTGTGGCATCAAAC+AGG + chr7_1:33213096-33213115 Msa1016490:intron 40.0%
TGTGGCATCAAACAGGAATA+AGG + chr7_1:33213103-33213122 Msa1016490:intron 40.0%
CAGAGAAGAACGATTTGATC+CGG + chr7_1:33213323-33213342 Msa1016490:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG + chr7_1:33213449-33213468 Msa1016490:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr7_1:33213663-33213682 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr7_1:33213794-33213813 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr7_1:33213795-33213814 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr7_1:33213796-33213815 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr7_1:33213827-33213846 None:intergenic 40.0%
! AAGGTACCACTTAAGCTGAA+AGG - chr7_1:33213969-33213988 None:intergenic 40.0%
! AGGTGTTTTGTGCGATAAGA+AGG - chr7_1:33213988-33214007 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr7_1:33214035-33214054 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr7_1:33214074-33214093 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr7_1:33214130-33214149 Msa1016490:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr7_1:33214137-33214156 None:intergenic 40.0%
TAACAATAGGACTGCACCAA+GGG - chr7_1:33214397-33214416 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr7_1:33214398-33214417 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr7_1:33214397-33214416 Msa1016490:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr7_1:33214398-33214417 Msa1016490:intron 40.0%
GCTATCCAGGATATGTATGA+GGG - chr7_1:33214470-33214489 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr7_1:33214471-33214490 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr7_1:33214483-33214502 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr7_1:33214527-33214546 Msa1016490:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr7_1:33214535-33214554 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr7_1:33214664-33214683 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr7_1:33214663-33214682 Msa1016490:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr7_1:33214680-33214699 None:intergenic 40.0%
GCATGTAGTAGAATCAACAC+AGG + chr7_1:33215306-33215325 Msa1016490:intron 40.0%
!!! GCAATTGGTTGGTAGGATTT+TGG - chr7_1:33215356-33215375 None:intergenic 40.0%
!!! ATATTTTGGTGTGCCGCAAT+TGG - chr7_1:33215371-33215390 None:intergenic 40.0%
GCAGAAGAGCAATTCTTACA+TGG + chr7_1:33215654-33215673 Msa1016490:CDS 40.0%
TACATGGAAGGACAAAACTC+AGG + chr7_1:33215670-33215689 Msa1016490:CDS 40.0%
! ATGCCGACTGAATCACATTT+CGG - chr7_1:33215800-33215819 None:intergenic 40.0%
CCAATGCCAGCATATTTCAT+TGG - chr7_1:33215891-33215910 None:intergenic 40.0%
CCAATGAAATATGCTGGCAT+TGG + chr7_1:33215888-33215907 Msa1016490:intron 40.0%
TACTACGAGACACAAAAACG+AGG + chr7_1:33216343-33216362 Msa1016490:intron 40.0%
GATGAACCAGGTTTAGATGT+TGG - chr7_1:33216715-33216734 None:intergenic 40.0%
GACTTGTCTTTAGATGAACC+AGG - chr7_1:33216727-33216746 None:intergenic 40.0%
CTAACACAACACCACAAAAC+TGG - chr7_1:33216871-33216890 None:intergenic 40.0%
!!! CAGTTTTGTGGTGTTGTGTT+AGG + chr7_1:33216869-33216888 Msa1016490:intron 40.0%
TAAAGACATTGAGCTCACTG+AGG - chr7_1:33216963-33216982 None:intergenic 40.0%
GTGAGCTCAATGTCTTTATG+TGG + chr7_1:33216965-33216984 Msa1016490:intron 40.0%
AGCTCAATGTCTTTATGTGG+TGG + chr7_1:33216968-33216987 Msa1016490:intron 40.0%
GCTCAATGTCTTTATGTGGT+GGG + chr7_1:33216969-33216988 Msa1016490:intron 40.0%
TCAAGAGTCACTCATTCATC+AGG - chr7_1:33217240-33217259 None:intergenic 40.0%
CATCTAGTCTATGAAATGCC+GGG - chr7_1:33217314-33217333 None:intergenic 40.0%
TAAATAGGATCAGTGAGCGA+AGG + chr7_1:33217374-33217393 Msa1016490:intron 40.0%
! CAAGGATGATGATGTTCACA+AGG - chr7_1:33217458-33217477 None:intergenic 40.0%
TTCTTGGATCACCCAAATTG+CGG - chr7_1:33217671-33217690 None:intergenic 40.0%
GAAGAACATATATCCAGCCA+AGG - chr7_1:33217727-33217746 None:intergenic 40.0%
GAACTTATTTGTAAGGCAGC+GGG - chr7_1:33217822-33217841 None:intergenic 40.0%
CAATGTTGTGCAAGTAGTGA+AGG - chr7_1:33217850-33217869 None:intergenic 40.0%
CACTACTTGCACAACATTGA+AGG + chr7_1:33217851-33217870 Msa1016490:intron 40.0%
! CTTGTAATTATGGTGGAGGT+TGG - chr7_1:33217878-33217897 None:intergenic 40.0%
GCCTCATCTTGTAATTATGG+TGG - chr7_1:33217885-33217904 None:intergenic 40.0%
CGTTGCATCATCCGTAATTT+GGG - chr7_1:33218241-33218260 None:intergenic 40.0%
ACGTTGCATCATCCGTAATT+TGG - chr7_1:33218242-33218261 None:intergenic 40.0%
GGAGTGAATGAACTGAAAAC+TGG - chr7_1:33218304-33218323 None:intergenic 40.0%
TGAGCAATGGTCTTCTTACA+AGG + chr7_1:33218427-33218446 Msa1016490:intron 40.0%
! TCAAAAGGCGCAATTTGTGA+AGG + chr7_1:33218460-33218479 Msa1016490:intron 40.0%
AGAAGATTGTTTCCCGATGT+AGG + chr7_1:33218898-33218917 Msa1016490:intron 40.0%
GAAGATTGTTTCCCGATGTA+GGG + chr7_1:33218899-33218918 Msa1016490:intron 40.0%
AAGATTGTTTCCCGATGTAG+GGG + chr7_1:33218900-33218919 Msa1016490:intron 40.0%
TATTCACTTTCCCCTACATC+GGG - chr7_1:33218913-33218932 None:intergenic 40.0%
GAGTTTGCAAACTTGTCAGA+TGG + chr7_1:33218935-33218954 Msa1016490:intron 40.0%
AACTTGTCAGATGGAAGAGA+AGG + chr7_1:33218944-33218963 Msa1016490:intron 40.0%
AGATGGATCCAAAAACATGG+TGG + chr7_1:33219002-33219021 Msa1016490:intron 40.0%
! GCATGATTTTCTCAATGTGG+GGG + chr7_1:33219266-33219285 Msa1016490:intron 40.0%
!!! AAGTACTCGGTTTGTTTTGG+GGG + chr7_1:33219340-33219359 Msa1016490:intron 40.0%
GCAGGGTTGTGAAGTTAAAT+TGG + chr7_1:33219495-33219514 Msa1016490:intron 40.0%
! ACTCTACGATGTGCATGTTT+TGG + chr7_1:33219613-33219632 Msa1016490:intron 40.0%
! CTCTACGATGTGCATGTTTT+GGG + chr7_1:33219614-33219633 Msa1016490:intron 40.0%
TGGGACATAAAAGACCAGTA+TGG + chr7_1:33219633-33219652 Msa1016490:intron 40.0%
!!! TTTTTTTGGGACAGAAGGTG+GGG + chr7_1:33219786-33219805 Msa1016490:intron 40.0%
AATCAGTGCAAGGCCATATT+CGG - chr7_1:33220645-33220664 None:intergenic 40.0%
TATGCTGATCTTGTACTCTC+TGG + chr7_1:33220688-33220707 Msa1016490:intron 40.0%
! TCTTGTACTCTCTGGTTTAC+AGG + chr7_1:33220696-33220715 Msa1016490:intron 40.0%
GCTTTACATCAGAAGCAAGT+TGG - chr7_1:33220726-33220745 None:intergenic 40.0%
!! GCTAATTTTAGAGACCTCCT+TGG - chr7_1:33220767-33220786 None:intergenic 40.0%
GATGCATCTAGAAAAAAGGG+AGG - chr7_1:33220885-33220904 None:intergenic 40.0%
ATGCATCGTTCTCAGTAGAA+AGG + chr7_1:33220933-33220952 Msa1016490:three_prime_UTR 40.0%
TGCATCGTTCTCAGTAGAAA+GGG + chr7_1:33220934-33220953 Msa1016490:three_prime_UTR 40.0%
AGCGCTTTGTATATTCGAAG+CGG - chr7_1:33221018-33221037 None:intergenic 40.0%
! ATCTAGGGTTTGAGGATTGG+TGG - chr7_1:33208247-33208266 None:intergenic 45.0%
! CACATCTAGGGTTTGAGGAT+TGG - chr7_1:33208250-33208269 None:intergenic 45.0%
! GGTTTCACATCTAGGGTTTG+AGG - chr7_1:33208255-33208274 None:intergenic 45.0%
! CCGTTTATCGATTACGCTGT+TGG + chr7_1:33208273-33208292 Msa1016490:CDS 45.0%
!! TTAGAGTATCGTTCGGGTAG+CGG + chr7_1:33208564-33208583 Msa1016490:intron 45.0%
TAGGTCTTTCTCCACCTCTA+CGG - chr7_1:33208593-33208612 None:intergenic 45.0%
AGATTTGAACCTAGGACCTC+TGG + chr7_1:33208785-33208804 Msa1016490:intron 45.0%
GTCTATTCCAGCTTAACCAG+AGG - chr7_1:33208804-33208823 None:intergenic 45.0%
! TGTATGTTTGGTTCCACTCC+TGG - chr7_1:33209154-33209173 None:intergenic 45.0%
TTGTAGTACAAGAACCGACG+AGG - chr7_1:33209788-33209807 None:intergenic 45.0%
CTCTCTATTCATCACGGACA+AGG + chr7_1:33209857-33209876 Msa1016490:intron 45.0%
! GTGCTGGTCATTTAACCAGA+TGG - chr7_1:33210753-33210772 None:intergenic 45.0%
!!! GCGTTTTTTAGTGGAGTACG+TGG - chr7_1:33211007-33211026 None:intergenic 45.0%
CTCATGGTCGATTGAAGATG+AGG - chr7_1:33211180-33211199 None:intergenic 45.0%
!! AACGGGATTTAGCTTTGTGG+TGG + chr7_1:33211451-33211470 Msa1016490:intron 45.0%
! GCTTTGTGGTGGTGAGATAT+TGG + chr7_1:33211462-33211481 Msa1016490:intron 45.0%
CAGTGCAAAACTATTGGGCT+GGG + chr7_1:33211516-33211535 Msa1016490:intron 45.0%
TGGCTGTCGTGCAAATTAGT+GGG + chr7_1:33211678-33211697 Msa1016490:intron 45.0%
AGAATTGGTCAAAAGCCTGG+AGG + chr7_1:33211924-33211943 Msa1016490:intron 45.0%
!! AAAAGCCTGGAGGCTTTGAA+GGG + chr7_1:33211934-33211953 Msa1016490:intron 45.0%
GGAATAACTAACTGCTGTGC+TGG + chr7_1:33211957-33211976 Msa1016490:intron 45.0%
AACTAACTGCTGTGCTGGAA+AGG + chr7_1:33211962-33211981 Msa1016490:intron 45.0%
AAGGCTTGAACTTGGTACCT+AGG + chr7_1:33211981-33212000 Msa1016490:intron 45.0%
! AAACGTGGACCCCAACTTTT+TGG + chr7_1:33212114-33212133 Msa1016490:intron 45.0%
GAGGTGACTCCAAAAAGTTG+GGG - chr7_1:33212126-33212145 None:intergenic 45.0%
CGTCAAAAATGGCTGCAACA+TGG + chr7_1:33212203-33212222 Msa1016490:intron 45.0%
GCATTGTAACGACTCTGGTT+TGG + chr7_1:33212967-33212986 Msa1016490:intron 45.0%
AGGGACATAGTAAGACTGCA+TGG + chr7_1:33213068-33213087 Msa1016490:intron 45.0%
GCATGGATTCCTAACTTCTG+TGG + chr7_1:33213085-33213104 Msa1016490:intron 45.0%
ATCTTTGAACCGCTCCAACT+CGG - chr7_1:33213230-33213249 None:intergenic 45.0%
AGTTGGAGCGGTTCAAAGAT+CGG + chr7_1:33213230-33213249 Msa1016490:intron 45.0%
GGTTCAAAGATCGGAGAAGA+CGG + chr7_1:33213239-33213258 Msa1016490:intron 45.0%
AAGCGGCTGTGTTATGTTGA+AGG + chr7_1:33213420-33213439 Msa1016490:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG + chr7_1:33213437-33213456 Msa1016490:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_1:33213522-33213541 Msa1016490:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_1:33213523-33213542 Msa1016490:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr7_1:33213669-33213688 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr7_1:33213679-33213698 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr7_1:33213793-33213812 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr7_1:33213874-33213893 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr7_1:33213877-33213896 Msa1016490:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr7_1:33213913-33213932 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr7_1:33213914-33213933 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr7_1:33213918-33213937 Msa1016490:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr7_1:33213922-33213941 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + chr7_1:33213989-33214008 Msa1016490:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr7_1:33214008-33214027 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr7_1:33214022-33214041 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr7_1:33214031-33214050 None:intergenic 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG + chr7_1:33214192-33214211 Msa1016490:intron 45.0%
TAAATGGGAGGCTAGAGACT+TGG - chr7_1:33214247-33214266 None:intergenic 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG - chr7_1:33214262-33214281 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr7_1:33214287-33214306 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr7_1:33214315-33214334 Msa1016490:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr7_1:33214525-33214544 None:intergenic 45.0%
GGGATCTCACTAAAGATCGT+TGG - chr7_1:33215087-33215106 None:intergenic 45.0%
!! GATCCCGATTTTGACAACCA+TGG + chr7_1:33215101-33215120 Msa1016490:intron 45.0%
GGACAAAATTCCTACTGCGT+TGG + chr7_1:33215327-33215346 Msa1016490:intron 45.0%
ATATGAGAGGAGGAGCTTTC+AGG + chr7_1:33215416-33215435 Msa1016490:intron 45.0%
!! GAGCTTTCAGGTGGCTTTTT+CGG + chr7_1:33215428-33215447 Msa1016490:intron 45.0%
!! AGCTTTCAGGTGGCTTTTTC+GGG + chr7_1:33215429-33215448 Msa1016490:intron 45.0%
!!! TTTTTCGGGGGTTATGCGAA+AGG + chr7_1:33215443-33215462 Msa1016490:intron 45.0%
! ATGTGGTTCGGATCCAATGT+TGG - chr7_1:33215472-33215491 None:intergenic 45.0%
TTGATCCATCTCACTCTCAG+TGG + chr7_1:33215522-33215541 Msa1016490:intron 45.0%
TGATCCATCTCACTCTCAGT+GGG + chr7_1:33215523-33215542 Msa1016490:intron 45.0%
AAAATTGAAAGACGGGCAGG+AGG + chr7_1:33215822-33215841 Msa1016490:CDS 45.0%
TGCTGGCCAATGAAATATGC+TGG + chr7_1:33215882-33215901 Msa1016490:intron 45.0%
! GGGACCTGTGCTTTTGATAA+TGG + chr7_1:33215909-33215928 Msa1016490:intron 45.0%
!! AGTGAGACGCTTCGCTTTTA+GGG - chr7_1:33215984-33216003 None:intergenic 45.0%
!! AAGTGAGACGCTTCGCTTTT+AGG - chr7_1:33215985-33216004 None:intergenic 45.0%
! AAAGCGAAGCGTCTCACTTT+CGG + chr7_1:33215986-33216005 Msa1016490:CDS 45.0%
! GGCATTTGAGATTACACCGA+CGG - chr7_1:33216023-33216042 None:intergenic 45.0%
TCCCCACATCGGATAAAAGA+TGG + chr7_1:33216801-33216820 Msa1016490:intron 45.0%
! GCCATCTTTTATCCGATGTG+GGG - chr7_1:33216805-33216824 None:intergenic 45.0%
! GGCCATCTTTTATCCGATGT+GGG - chr7_1:33216806-33216825 None:intergenic 45.0%
! AGGCCATCTTTTATCCGATG+TGG - chr7_1:33216807-33216826 None:intergenic 45.0%
!! CAAAACTGGTTTGTGAGGTG+AGG - chr7_1:33216857-33216876 None:intergenic 45.0%
! CACCTCACAAACCAGTTTTG+TGG + chr7_1:33216857-33216876 Msa1016490:intron 45.0%
!! CACCACAAAACTGGTTTGTG+AGG - chr7_1:33216862-33216881 None:intergenic 45.0%
GAATGAGTTACGCAACGGAA+AGG + chr7_1:33217169-33217188 Msa1016490:intron 45.0%
ACGTTGCATCATCCGCAATT+TGG + chr7_1:33217656-33217675 Msa1016490:intron 45.0%
CGTTGCATCATCCGCAATTT+GGG + chr7_1:33217657-33217676 Msa1016490:intron 45.0%
! GGCAGCGGGTTTAATTATTG+AGG - chr7_1:33217808-33217827 None:intergenic 45.0%
AGAGCCACGTCCTGTAATTA+TGG + chr7_1:33218012-33218031 Msa1016490:intron 45.0%
ACCTCCATAATTACAGGACG+TGG - chr7_1:33218019-33218038 None:intergenic 45.0%
GGGTCAACCTCCATAATTAC+AGG - chr7_1:33218025-33218044 None:intergenic 45.0%
GAAGCACATATGTGCAACCA+AGG + chr7_1:33218166-33218185 Msa1016490:intron 45.0%
! GCGTGTTGCTCTTAGTTCAA+TGG - chr7_1:33218718-33218737 None:intergenic 45.0%
GAATTGGTTAGGCAACGGAA+AGG - chr7_1:33218740-33218759 None:intergenic 45.0%
TTTCCACAGTGAGCTCAATG+TGG - chr7_1:33218864-33218883 None:intergenic 45.0%
GTCAGATGGAAGAGAAGGTT+TGG + chr7_1:33218949-33218968 Msa1016490:intron 45.0%
TGGAGCCAAGTTTGGATCAT+TGG + chr7_1:33219191-33219210 Msa1016490:intron 45.0%
! AAATTGGGTTGTGCGTTGAG+AGG + chr7_1:33219511-33219530 Msa1016490:intron 45.0%
! AATTGGGTTGTGCGTTGAGA+GGG + chr7_1:33219512-33219531 Msa1016490:intron 45.0%
GACAGACAGAACCAGTTATC+AGG + chr7_1:33219880-33219899 Msa1016490:intron 45.0%
GAGTCTTCATAACGCTTGTG+TGG + chr7_1:33220361-33220380 Msa1016490:intron 45.0%
AGAAAAGAGATCCTTGGCCA+AGG + chr7_1:33220747-33220766 Msa1016490:CDS 45.0%
! AAAAGGGAGGGTATGACGAT+TGG - chr7_1:33220872-33220891 None:intergenic 45.0%
!! TAAAAAAAAAATGAAATTAT+AGG - chr7_1:33214825-33214844 None:intergenic 5.0%
!!! TATTATGAATTTATTTTTTA+AGG + chr7_1:33214927-33214946 Msa1016490:intron 5.0%
!!! ATTATGAATTTATTTTTTAA+GGG + chr7_1:33214928-33214947 Msa1016490:intron 5.0%
!!! ATTATTTATTTTATAAAAGT+TGG + chr7_1:33215284-33215303 Msa1016490:intron 5.0%
!! TATATAAAAAAAATATATAG+CGG + chr7_1:33219407-33219426 Msa1016490:intron 5.0%
GAGTGGTTAACGGAGGGAAT+GGG - chr7_1:33208207-33208226 None:intergenic 50.0%
TGTGGGTGTGGAGTGGTTAA+CGG - chr7_1:33208217-33208236 None:intergenic 50.0%
! GGATTGGTGGTTGTGGTTGT+GGG - chr7_1:33208234-33208253 None:intergenic 50.0%
! AGGATTGGTGGTTGTGGTTG+TGG - chr7_1:33208235-33208254 None:intergenic 50.0%
! GGTTTGAGGATTGGTGGTTG+TGG - chr7_1:33208241-33208260 None:intergenic 50.0%
!!! CGGCGTCGTTGAAGGTTTTT+TGG - chr7_1:33208314-33208333 None:intergenic 50.0%
AAAAACCTTCAACGACGCCG+TGG + chr7_1:33208314-33208333 Msa1016490:CDS 50.0%
!! AGCGTCGATTGCAGAATCCA+CGG - chr7_1:33208334-33208353 None:intergenic 50.0%
TAGTTGCGACTTGCGTGTAG+AGG - chr7_1:33208707-33208726 None:intergenic 50.0%
GCGGCTCCAGAAGTAATTAC+TGG - chr7_1:33209433-33209452 None:intergenic 50.0%
TGTCGTTGTCGTTGCTCTCA+CGG - chr7_1:33211398-33211417 None:intergenic 50.0%
! GTGGTGGTGAGATATTGGTG+TGG + chr7_1:33211467-33211486 Msa1016490:intron 50.0%
GTGGTGAGATATTGGTGTGG+CGG + chr7_1:33211470-33211489 Msa1016490:intron 50.0%
GCAGTGCAAAACTATTGGGC+TGG + chr7_1:33211515-33211534 Msa1016490:intron 50.0%
GTGGCTGTCGTGCAAATTAG+TGG + chr7_1:33211677-33211696 Msa1016490:intron 50.0%
GGCTGTCGTGCAAATTAGTG+GGG + chr7_1:33211679-33211698 Msa1016490:intron 50.0%
! CAAAAGCCTGGAGGCTTTGA+AGG + chr7_1:33211933-33211952 Msa1016490:intron 50.0%
!! AAAGCCTGGAGGCTTTGAAG+GGG + chr7_1:33211935-33211954 Msa1016490:intron 50.0%
GTGCTGGAAAGGCTTGAACT+TGG + chr7_1:33211973-33211992 Msa1016490:intron 50.0%
!! TGTCATAGGAGGGCTGCTTT+TGG + chr7_1:33213006-33213025 Msa1016490:intron 50.0%
TCAAAGATCGGAGAAGACGG+CGG + chr7_1:33213242-33213261 Msa1016490:intron 50.0%
CACTCTTCGCGTGAAACAAC+CGG - chr7_1:33213345-33213364 None:intergenic 50.0%
! GTTGTTTCACGCGAAGAGTG+AGG + chr7_1:33213345-33213364 Msa1016490:intron 50.0%
TTTCACGCGAAGAGTGAGGT+CGG + chr7_1:33213349-33213368 Msa1016490:intron 50.0%
AAGAGTGAGGTCGGAATGAG+AGG + chr7_1:33213358-33213377 Msa1016490:intron 50.0%
!! TGCTCGTTTGTTGTTCCCTG+CGG + chr7_1:33213384-33213403 Msa1016490:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_1:33213524-33213543 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_1:33213521-33213540 Msa1016490:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_1:33213527-33213546 Msa1016490:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr7_1:33213846-33213865 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr7_1:33213866-33213885 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr7_1:33213927-33213946 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr7_1:33214147-33214166 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr7_1:33214198-33214217 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr7_1:33214195-33214214 Msa1016490:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG + chr7_1:33214214-33214233 Msa1016490:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - chr7_1:33214224-33214243 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG - chr7_1:33214263-33214282 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr7_1:33214276-33214295 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr7_1:33214277-33214296 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr7_1:33214378-33214397 Msa1016490:intron 50.0%
TAGTGTGAGGATGCAGGATG+GGG - chr7_1:33214438-33214457 None:intergenic 50.0%
CTAGTGTGAGGATGCAGGAT+GGG - chr7_1:33214439-33214458 None:intergenic 50.0%
ACTAGTGTGAGGATGCAGGA+TGG - chr7_1:33214440-33214459 None:intergenic 50.0%
TTCGACTAGTGTGAGGATGC+AGG - chr7_1:33214444-33214463 None:intergenic 50.0%
AAGCGCCCTCATACATATCC+TGG + chr7_1:33214462-33214481 Msa1016490:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr7_1:33214513-33214532 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr7_1:33214514-33214533 None:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr7_1:33214515-33214534 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr7_1:33214624-33214643 None:intergenic 50.0%
GGAGACTTAGAGTGTGTGCT+TGG + chr7_1:33215172-33215191 Msa1016490:intron 50.0%
!! ATTTTGGGTGCCAACGCAGT+AGG - chr7_1:33215340-33215359 None:intergenic 50.0%
! TTTGGTGTGCCGCAATTGGT+TGG - chr7_1:33215367-33215386 None:intergenic 50.0%
!!! GCTTTCAGGTGGCTTTTTCG+GGG + chr7_1:33215430-33215449 Msa1016490:intron 50.0%
!!! CTTTCAGGTGGCTTTTTCGG+GGG + chr7_1:33215431-33215450 Msa1016490:intron 50.0%
ATGCGAAAGGCCTCCAACAT+TGG + chr7_1:33215456-33215475 Msa1016490:intron 50.0%
! TGGTTCGGATCCAATGTTGG+AGG - chr7_1:33215469-33215488 None:intergenic 50.0%
CAATCCCACTGAGAGTGAGA+TGG - chr7_1:33215530-33215549 None:intergenic 50.0%
TTCGGTCACAGGTAAACCGT+CGG + chr7_1:33216004-33216023 Msa1016490:intron 50.0%
TCTCCAACAACTCCCCACAT+CGG + chr7_1:33216790-33216809 Msa1016490:intron 50.0%
TATCCGATGTGGGGAGTTGT+TGG - chr7_1:33216796-33216815 None:intergenic 50.0%
GACATTGAGCTCACTGAGGA+AGG - chr7_1:33216959-33216978 None:intergenic 50.0%
GCCACGTCCTGTAATTATGG+AGG + chr7_1:33218015-33218034 Msa1016490:intron 50.0%
CACAGTGAGCTCAATGTGGA+GGG - chr7_1:33218860-33218879 None:intergenic 50.0%
GATGTCACTGGAGCCAAGTT+TGG + chr7_1:33219183-33219202 Msa1016490:intron 50.0%
TTCTCAATGTGGGGGTGACT+AGG + chr7_1:33219274-33219293 Msa1016490:intron 50.0%
AGTCTTGCGCTATGAAGCAC+GGG - chr7_1:33219468-33219487 None:intergenic 50.0%
GAGTCTTGCGCTATGAAGCA+CGG - chr7_1:33219469-33219488 None:intergenic 50.0%
AAAGAGATCCTTGGCCAAGG+AGG + chr7_1:33220750-33220769 Msa1016490:CDS 50.0%
TTTAGAGACCTCCTTGGCCA+AGG - chr7_1:33220761-33220780 None:intergenic 50.0%
GTTAACGGAGGGAATGGGTG+GGG - chr7_1:33208202-33208221 None:intergenic 55.0%
GGTTAACGGAGGGAATGGGT+GGG - chr7_1:33208203-33208222 None:intergenic 55.0%
TGGTTAACGGAGGGAATGGG+TGG - chr7_1:33208204-33208223 None:intergenic 55.0%
GGAGTGGTTAACGGAGGGAA+TGG - chr7_1:33208208-33208227 None:intergenic 55.0%
GGTGTGGAGTGGTTAACGGA+GGG - chr7_1:33208213-33208232 None:intergenic 55.0%
TTGTGGTTGTGGGTGTGGAG+TGG - chr7_1:33208224-33208243 None:intergenic 55.0%
AGAATCCACGGCGTCGTTGA+AGG - chr7_1:33208322-33208341 None:intergenic 55.0%
CCAGCTTAACCAGAGGTCCT+AGG - chr7_1:33208797-33208816 None:intergenic 55.0%
CCTAGGACCTCTGGTTAAGC+TGG + chr7_1:33208794-33208813 Msa1016490:intron 55.0%
TTTGAGGACCAGAAGCCCCA+CGG - chr7_1:33209461-33209480 None:intergenic 55.0%
GTTATGTTGCAGGGCCTCGT+CGG + chr7_1:33209771-33209790 Msa1016490:intron 55.0%
! GCAAAACTATTGGGCTGGGC+AGG + chr7_1:33211520-33211539 Msa1016490:intron 55.0%
! AAACTATTGGGCTGGGCAGG+AGG + chr7_1:33211523-33211542 Msa1016490:intron 55.0%
!! AAGCCTGGAGGCTTTGAAGG+GGG + chr7_1:33211936-33211955 Msa1016490:intron 55.0%
ATTCCCCCTTCAAAGCCTCC+AGG - chr7_1:33211942-33211961 None:intergenic 55.0%
TTTGAACCGCTCCAACTCGG+TGG - chr7_1:33213227-33213246 None:intergenic 55.0%
!! TCGTTTGTTGTTCCCTGCGG+CGG + chr7_1:33213387-33213406 Msa1016490:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_1:33213529-33213548 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_1:33213535-33213554 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_1:33213536-33213555 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_1:33213535-33213554 Msa1016490:intron 55.0%
CTTCTTACCACGGCGTCTAC+TGG + chr7_1:33213702-33213721 Msa1016490:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr7_1:33213854-33213873 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr7_1:33213910-33213929 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr7_1:33213940-33213959 None:intergenic 55.0%
ATGGGAGGCTAGAGACTTGG+AGG - chr7_1:33214244-33214263 None:intergenic 55.0%
CGAGGGAGGAGTTAAATGGG+AGG - chr7_1:33214259-33214278 None:intergenic 55.0%
AGGATGCAGGATGGGGATAC+CGG - chr7_1:33214431-33214450 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr7_1:33214504-33214523 Msa1016490:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr7_1:33214505-33214524 Msa1016490:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr7_1:33214609-33214628 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr7_1:33214613-33214632 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr7_1:33214654-33214673 None:intergenic 55.0%
GTGTGCCGCAATTGGTTGGT+AGG - chr7_1:33215363-33215382 None:intergenic 55.0%
TGAGAGGAGGAGCTTTCAGG+TGG + chr7_1:33215419-33215438 Msa1016490:intron 55.0%
!! CGCTTTTAGGGAGCTCTCCA+AGG - chr7_1:33215972-33215991 None:intergenic 55.0%
AGCGTCTCACTTTCGGTCAC+AGG + chr7_1:33215993-33216012 Msa1016490:CDS 55.0%
! CGTGCTGCTCTTAGTTCAGC+CGG + chr7_1:33217192-33217211 Msa1016490:intron 55.0%
CCACAGTGAGCTCAATGTGG+AGG - chr7_1:33218861-33218880 None:intergenic 55.0%
CCTCCACATTGAGCTCACTG+TGG + chr7_1:33218858-33218877 Msa1016490:intron 55.0%
AGCGCAAGACTCTCAACTGC+AGG + chr7_1:33219477-33219496 Msa1016490:intron 55.0%
GCGCAAGACTCTCAACTGCA+GGG + chr7_1:33219478-33219497 Msa1016490:intron 55.0%
GGGTGTGGAGTGGTTAACGG+AGG - chr7_1:33208214-33208233 None:intergenic 60.0%
GGTGGTTGTGGTTGTGGGTG+TGG - chr7_1:33208229-33208248 None:intergenic 60.0%
! ATCTCTAGAGGGGGCTCGAG+AGG - chr7_1:33208740-33208759 None:intergenic 60.0%
GTCGTTGCTCTCACGGTCGT+CGG - chr7_1:33211391-33211410 None:intergenic 60.0%
TCACCAGGTCTCCACCGAGT+TGG + chr7_1:33213213-33213232 Msa1016490:intron 60.0%
! AGGTCTCCACCGAGTTGGAG+CGG + chr7_1:33213218-33213237 Msa1016490:intron 60.0%
GAGAAGACCAGTAGACGCCG+TGG - chr7_1:33213712-33213731 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr7_1:33214273-33214292 None:intergenic 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG - chr7_1:33214451-33214470 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr7_1:33214508-33214527 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr7_1:33214647-33214666 Msa1016490:intron 60.0%
GGCAATCGCTCCAACACACG+CGG - chr7_1:33219960-33219979 None:intergenic 60.0%
!! GGGTGGGGATGGAGGTGCTT+CGG - chr7_1:33208187-33208206 None:intergenic 65.0%
GAGGGAATGGGTGGGGATGG+AGG - chr7_1:33208195-33208214 None:intergenic 65.0%
ACGGAGGGAATGGGTGGGGA+TGG - chr7_1:33208198-33208217 None:intergenic 65.0%
! TCGGGTAGCGGCTACCGTAG+AGG + chr7_1:33208576-33208595 Msa1016490:intron 65.0%
! GGTAGCGGCTACCGTAGAGG+TGG + chr7_1:33208579-33208598 Msa1016490:intron 65.0%
!! TTCTGGAGCCGCTGCTTCCG+TGG + chr7_1:33209441-33209460 Msa1016490:CDS 65.0%
! TCTGGAGCCGCTGCTTCCGT+GGG + chr7_1:33209442-33209461 Msa1016490:CDS 65.0%
CAGAAGCCCCACGGAAGCAG+CGG - chr7_1:33209452-33209471 None:intergenic 65.0%
TGCTCTCACGGTCGTCGGAG+CGG - chr7_1:33211386-33211405 None:intergenic 65.0%
GTACGATCTCGCGCGTCACC+AGG + chr7_1:33213198-33213217 Msa1016490:intron 65.0%
! GCTCCAACTCGGTGGAGACC+TGG - chr7_1:33213219-33213238 None:intergenic 65.0%
! TTGTTGTTCCCTGCGGCGGC+TGG + chr7_1:33213391-33213410 Msa1016490:intron 65.0%
TTCTGCAACCAGCCGCCGCA+GGG - chr7_1:33213402-33213421 None:intergenic 65.0%
GAGTGCTTCGCCGCGTGTGT+TGG + chr7_1:33219947-33219966 Msa1016490:intron 65.0%
CTGGAGCCGCTGCTTCCGTG+GGG + chr7_1:33209443-33209462 Msa1016490:CDS 70.0%
CGCTGCTTCCGTGGGGCTTC+TGG + chr7_1:33209450-33209469 Msa1016490:CDS 70.0%
GCGGAGCGTACAACGCGCAG+AGG + chr7_1:33213261-33213280 Msa1016490:intron 70.0%
CTTCTGCAACCAGCCGCCGC+AGG - chr7_1:33213403-33213422 None:intergenic 70.0%
! GCGGCGGCTGGTTGCAGAAG+CGG + chr7_1:33213403-33213422 Msa1016490:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 33208156 33221326 33208156 ID=Msa1016490;Name=Msa1016490
chr7_1 mRNA 33208156 33221326 33208156 ID=Msa1016490-mRNA-1;Parent=Msa1016490;Name=Msa1016490-mRNA-1;_AED=0.11;_eAED=0.12;_QI=0|0.87|0.77|1|0.75|0.77|9|519|253
chr7_1 exon 33208156 33208363 33208156 ID=Msa1016490-mRNA-1:exon:6488;Parent=Msa1016490-mRNA-1
chr7_1 exon 33209267 33209338 33209267 ID=Msa1016490-mRNA-1:exon:6489;Parent=Msa1016490-mRNA-1
chr7_1 exon 33209404 33209481 33209404 ID=Msa1016490-mRNA-1:exon:6490;Parent=Msa1016490-mRNA-1
chr7_1 exon 33209783 33209835 33209783 ID=Msa1016490-mRNA-1:exon:6491;Parent=Msa1016490-mRNA-1
chr7_1 exon 33210496 33210579 33210496 ID=Msa1016490-mRNA-1:exon:6492;Parent=Msa1016490-mRNA-1
chr7_1 exon 33215639 33215691 33215639 ID=Msa1016490-mRNA-1:exon:6493;Parent=Msa1016490-mRNA-1
chr7_1 exon 33215779 33215843 33215779 ID=Msa1016490-mRNA-1:exon:6494;Parent=Msa1016490-mRNA-1
chr7_1 exon 33215956 33216014 33215956 ID=Msa1016490-mRNA-1:exon:6495;Parent=Msa1016490-mRNA-1
chr7_1 exon 33220718 33221326 33220718 ID=Msa1016490-mRNA-1:exon:6496;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33208156 33208363 33208156 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33209267 33209338 33209267 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33209404 33209481 33209404 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33209783 33209835 33209783 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33210496 33210579 33210496 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33215639 33215691 33215639 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33215779 33215843 33215779 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33215956 33216014 33215956 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 CDS 33220718 33220807 33220718 ID=Msa1016490-mRNA-1:cds;Parent=Msa1016490-mRNA-1
chr7_1 three_prime_UTR 33220808 33221326 33220808 ID=Msa1016490-mRNA-1:three_prime_utr;Parent=Msa1016490-mRNA-1
Gene Sequence

>Msa1016490

ATGACAACTGTGGCGGAATCATCAGAATCCGAAGCACCTCCATCCCCACCCATTCCCTCCGTTAACCACTCCACACCCACAACCACAACCACCAATCCTCAAACCCTAGATGTGAAACCGTTTATCGATTACGCTGTTGGCCAAGTCCTACACTACCAAAAAACCTTCAACGACGCCGTGGATTCTGCAATCGACGCTTCCACTTCTCTGCAGGATTATTTGGATGATTTCAAGTCTCAGTACAATGCTTATGAGGAACTTCTGTTTGGAAAGATCAAAGAGGGTGTACTTGTTGCAGCTTCACATCCAGTAATTACTTCTGGAGCCGCTGCTTCCGTGGGGCTTCTGGTCCTCAAAAGGCCTCGTCGGTTCTTGTACTACAACATGCAGCGTCTTTTTGTTAGTGAAGAGTCTTTGGTTTCTAAAGCCAGTGAAGAAGTTAAAGAGTTGCGGCAGTCAATTGATCTCCTGAAATCTGAAGTTGAAAGGATGGAGAAGAGTGCATTACATGCAGAAGAGCAATTCTTACATGGAAGGACAAAACTCAGACAAGCAGGAAAGCAAATCCGAAATGTGATTCAGTCGGCATATAAAATTGAAAGACGGGCAGGAGGTTTAAAAGATATCCTTGGAGAGCTCCCTAAAAGCGAAGCGTCTCACTTTCGGTCACAGGTTTCCCAACTTGCTTCTGATGTAAAGCAAGAAAAGAGATCCTTGGCCAAGGAGGTCTCTAAAATTAGCAACTATGGCATCTCCATTTAA

Protein sequence

>Msa1016490

MTTVAESSESEAPPSPPIPSVNHSTPTTTTTNPQTLDVKPFIDYAVGQVLHYQKTFNDAVDSAIDASTSLQDYLDDFKSQYNAYEELLFGKIKEGVLVAASHPVITSGAAASVGLLVLKRPRRFLYYNMQRLFVSEESLVSKASEEVKELRQSIDLLKSEVERMEKSALHAEEQFLHGRTKLRQAGKQIRNVIQSAYKIERRAGGLKDILGELPKSEASHFRSQVSQLASDVKQEKRSLAKEVSKISNYGISI*