AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1021530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1021530 MtrunA17_Chr7g0237721 99.024 205 2 0 166 370 1 205 4.07e-153 433
Msa1021530 MtrunA17_Chr7g0237731 97.241 145 4 0 1 145 99 243 3.54e-100 296
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1021530 AT5G24450.2 52.665 319 149 2 29 347 113 429 3.70e-125 370
Msa1021530 AT5G24450.1 52.174 322 152 2 29 350 113 432 1.64e-124 370
Msa1021530 AT3G49410.3 48.711 349 174 4 25 370 105 451 4.60e-123 367
Msa1021530 AT3G49410.1 48.711 349 174 4 25 370 105 451 4.60e-123 367
Msa1021530 AT3G49410.2 47.853 326 167 3 46 370 1 324 9.87e-115 341
Msa1021530 AT3G49410.4 47.853 326 167 3 46 370 1 324 9.87e-115 341

Find 131 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGGTTGATTTGTGTATT+TGG 0.109855 7_1:-45930867 Msa1021530:three_prime_UTR
ACCGGAGCCTCAGGGATTTC+TGG 0.162397 7_1:-45937479 Msa1021530:five_prime_UTR
CCAATTTCTCTTCTTCCTTT+TGG 0.162987 7_1:+45936839 None:intergenic
GAACTAAATTTACCTCAAAA+TGG 0.172446 7_1:+45936071 None:intergenic
CATGCAGATTGAAACATAAA+TGG 0.211046 7_1:-45933487 Msa1021530:intron
AAATCTTCTGGCATATCTTT+TGG 0.241904 7_1:+45936643 None:intergenic
CTTACTGTCATCCTGCATTT+GGG 0.250531 7_1:-45937236 Msa1021530:five_prime_UTR
TTTAATTTATGCTTTCAATT+TGG 0.266602 7_1:-45939154 Msa1021530:five_prime_UTR
AAAACCCACGATGTAGAAAT+TGG 0.270825 7_1:+45939111 None:intergenic
CACTATCTTCCTCGTATATA+TGG 0.278162 7_1:+45931249 None:intergenic
AATTGAAGAGAGAGTGCAAT+AGG 0.296848 7_1:-45932833 Msa1021530:CDS
GTGGACCATTTCAAAGGTTC+TGG 0.297025 7_1:-45934904 Msa1021530:CDS
AAGTGGGTCATTGAAATATT+AGG 0.310136 7_1:+45931349 None:intergenic
CCTTACTGTCATCCTGCATT+TGG 0.312246 7_1:-45937237 Msa1021530:five_prime_UTR
GGCGACAAAGCGCAAGAAAA+TGG 0.314657 7_1:-45931287 Msa1021530:three_prime_UTR
ATCAAGGATGGCACAATCTC+TGG 0.323087 7_1:-45937508 Msa1021530:five_prime_UTR
ATCACCTAAATGTGTTTCTT+CGG 0.325881 7_1:+45936809 None:intergenic
TAAACTCTCTGCACCTGGTT+TGG 0.329581 7_1:+45932884 None:intergenic
AACTAAATTTACCTCAAAAT+GGG 0.332958 7_1:+45936072 None:intergenic
AAACTCTCTGCACCTGGTTT+GGG 0.333082 7_1:+45932885 None:intergenic
ATGGCAGGGCTAGAAGTTAA+TGG 0.341584 7_1:-45937536 Msa1021530:intron
TCACCTAAATGTGTTTCTTC+GGG 0.348541 7_1:+45936810 None:intergenic
GACCCACTTACAAGAGCTTT+TGG 0.353360 7_1:-45931335 Msa1021530:three_prime_UTR
GGATGACAGTAAGGATCTTC+CGG 0.362071 7_1:+45937246 None:intergenic
CCTAACCTGTATTAGCTTGC+TGG 0.381912 7_1:+45932781 None:intergenic
CTCCTCTACACAAAGCTTCA+TGG 0.383495 7_1:+45932806 None:intergenic
ATGCAGATTGAAACATAAAT+GGG 0.388901 7_1:-45933486 Msa1021530:intron
ATTATAGAGATGTCTCTATA+AGG 0.391763 7_1:-45930884 Msa1021530:intron
ATTCCTTCTAGAGGTGTAAC+TGG 0.393337 7_1:-45931177 Msa1021530:three_prime_UTR
ACTGAACGCTTGCTCGATAA+GGG 0.395755 7_1:-45935084 Msa1021530:CDS
GAACCCGAAGAAACACATTT+AGG 0.400998 7_1:-45936813 Msa1021530:intron
TACTGAACGCTTGCTCGATA+AGG 0.405321 7_1:-45935085 Msa1021530:CDS
TGTTTGATGAGAAGCCTATA+TGG 0.407025 7_1:-45935122 Msa1021530:CDS
CCAAAAGGAAGAAGAGAAAT+TGG 0.410039 7_1:-45936839 Msa1021530:CDS
TAAACGTACAGTAAATCTTC+TGG 0.413929 7_1:+45936631 None:intergenic
AGGAGTTTGCATAAAAGTTA+TGG 0.417562 7_1:-45930816 Msa1021530:three_prime_UTR
TCTCCAGTTACACCTCTAGA+AGG 0.419508 7_1:+45931174 None:intergenic
GGATTTCTGGTGCACTATCC+TGG 0.419767 7_1:-45937466 Msa1021530:five_prime_UTR
AAAGATGTCTGGAACTTGTA+AGG 0.423609 7_1:+45933437 None:intergenic
TTTCCATCTGATGAAATTGA+AGG 0.423977 7_1:-45931308 Msa1021530:three_prime_UTR
TGGGGTTCTACCGGAGCCTC+AGG 0.430715 7_1:-45937488 Msa1021530:five_prime_UTR
GCCTCAATAAAGATGTTAAT+AGG 0.439503 7_1:+45931128 None:intergenic
CAAAGGTTCTGGATAAAGAA+AGG 0.439630 7_1:-45934893 Msa1021530:CDS
TTTATCCAGAACCTTTGAAA+TGG 0.442547 7_1:+45934899 None:intergenic
GATGACAGTAAGGATCTTCC+GGG 0.452159 7_1:+45937247 None:intergenic
CAACGAACTGTAAAGATGTC+TGG 0.457590 7_1:+45933426 None:intergenic
CTGGTTTGGGAAATATTGAT+AGG 0.458186 7_1:+45932898 None:intergenic
ATTGAAGAGAGAGTGCAATA+GGG 0.458970 7_1:-45932832 Msa1021530:CDS
TCGCCTTCAATTTCATCAGA+TGG 0.461895 7_1:+45931305 None:intergenic
CATGGACAGGAACAACATAT+TGG 0.465331 7_1:+45936871 None:intergenic
CACAATCTCTGGGGTTCTAC+CGG 0.468022 7_1:-45937497 Msa1021530:five_prime_UTR
GTGCAAGTGTCCTGCATTGG+AGG 0.468524 7_1:+45933365 None:intergenic
TGGCAGGGCTAGAAGTTAAT+GGG 0.477455 7_1:-45937535 Msa1021530:intron
ACCTATTAACATCTTTATTG+AGG 0.478593 7_1:-45931129 Msa1021530:three_prime_UTR
ACCAGAAATCCCTGAGGCTC+CGG 0.481553 7_1:+45937478 None:intergenic
TAGTCAGTCGAATTAGATTG+AGG 0.492085 7_1:-45930836 Msa1021530:three_prime_UTR
CCAGCAAGCTAATACAGGTT+AGG 0.492292 7_1:-45932781 Msa1021530:exon
GAAGTTAATGGGAGTGATCA+AGG 0.492611 7_1:-45937524 Msa1021530:five_prime_UTR
CCAAATGCAGGATGACAGTA+AGG 0.498365 7_1:+45937237 None:intergenic
TACGATCCACGCAAAGATCC+TGG 0.503742 7_1:-45934869 Msa1021530:CDS
GTCAGAAGAAGAACTTGATC+TGG 0.503867 7_1:-45932358 Msa1021530:intron
CTACCAAAAGCTCTTGTAAG+TGG 0.505631 7_1:+45931332 None:intergenic
AATAAATAAGCCTCCAATGC+AGG 0.506788 7_1:-45933375 Msa1021530:CDS
TTGGCAACATCCGCATGGAC+AGG 0.512033 7_1:+45936858 None:intergenic
CTCATCAAACATTCTAGATA+CGG 0.512655 7_1:+45935134 None:intergenic
TCAAGGATGGCACAATCTCT+GGG 0.515931 7_1:-45937507 Msa1021530:five_prime_UTR
TTCTAACAGCATGTGTGGAA+TGG 0.525010 7_1:-45937140 Msa1021530:exon
TTTCACATGGCATGTTCAGA+AGG 0.528340 7_1:-45935053 Msa1021530:intron
ACACATGCTGTTAGAAGTTG+TGG 0.532320 7_1:+45937147 None:intergenic
AGAAAACTGCCTGGTGATGA+TGG 0.532961 7_1:-45937172 Msa1021530:five_prime_UTR
GATAGTGTTGAAAGCGAGCA+TGG 0.533900 7_1:-45937100 Msa1021530:CDS
ACTGTGCAAGTGTCCTGCAT+TGG 0.539136 7_1:+45933362 None:intergenic
TTACTGTCATCCTGCATTTG+GGG 0.542650 7_1:-45937235 Msa1021530:five_prime_UTR
AGAGCAGTGGGAGTCACAAA+TGG 0.542674 7_1:-45935157 Msa1021530:CDS
CTGTCTTAGACAACGTCTCA+TGG 0.546585 7_1:-45932928 Msa1021530:CDS
TTTCAAGTGGACCATTTCAA+AGG 0.547357 7_1:-45934910 Msa1021530:CDS
ACTTCAACAAACGCTAATGC+TGG 0.550477 7_1:+45931106 None:intergenic
TCCATGCGGATGTTGCCAAA+AGG 0.550813 7_1:-45936854 Msa1021530:CDS
ACGTCTTACATGCGAGAACC+AGG 0.555455 7_1:+45934851 None:intergenic
TGGAAGTCAAGGCATCCTTA+AGG 0.555953 7_1:-45937404 Msa1021530:intron
CTGAGTAAACTCTCTGCACC+TGG 0.557111 7_1:+45932879 None:intergenic
TCCCACTGCTCTGAGCCTTG+TGG 0.559122 7_1:+45935168 None:intergenic
AAGATGTCTGGAACTTGTAA+GGG 0.561020 7_1:+45933438 None:intergenic
TGCTGATAAAGTAGATGAAG+AGG 0.561540 7_1:-45937074 Msa1021530:CDS
TTCCACAAGGCTCAGAGCAG+TGG 0.564062 7_1:-45935170 Msa1021530:CDS
AAAATGTTGAAGATGATGAC+GGG 0.565861 7_1:-45932413 Msa1021530:three_prime_UTR
ACAGCACGAGAGGTTGAAGA+TGG 0.567484 7_1:+45937439 None:intergenic
GAGGTTGAAGATGGATAACC+AGG 0.569504 7_1:+45937448 None:intergenic
TCTCGTGCTGTTGACACGCT+AGG 0.574103 7_1:-45937427 Msa1021530:five_prime_UTR
TTTGAACTTGATACGGTAGG+TGG 0.576883 7_1:+45936121 None:intergenic
TCCACAAGGCTCAGAGCAGT+GGG 0.577217 7_1:-45935169 Msa1021530:CDS
ACTAAATTTACCTCAAAATG+GGG 0.578076 7_1:+45936073 None:intergenic
TGATGACGGGGAGGCAGCTG+AGG 0.578760 7_1:-45932400 Msa1021530:three_prime_UTR
CTTGTAAGGGAAAGCACGAA+AGG 0.580439 7_1:+45933451 None:intergenic
CTATCAATATTTCCCAAACC+AGG 0.584441 7_1:-45932897 Msa1021530:CDS
ATTAGAGCTTCGATTTCGCC+CGG 0.584533 7_1:-45937265 Msa1021530:five_prime_UTR
ATACGAGAAGGAGACGGCAG+TGG 0.591854 7_1:+45932204 None:intergenic
GGGGTTCTACCGGAGCCTCA+GGG 0.595930 7_1:-45937487 Msa1021530:five_prime_UTR
AGCATGTGTGGAATGGAGCA+TGG 0.597007 7_1:-45937133 Msa1021530:CDS
AGCCATGAAGCTTTGTGTAG+AGG 0.600913 7_1:-45932808 Msa1021530:CDS
TACCAAAAGCTCTTGTAAGT+GGG 0.605719 7_1:+45931333 None:intergenic
CGTGCTGTTGACACGCTAGG+TGG 0.606349 7_1:-45937424 Msa1021530:five_prime_UTR
TATTGTTGCTCGTGTTCCCG+AGG 0.608004 7_1:-45937035 Msa1021530:CDS
GACACGCTAGGTGGAAGTCA+AGG 0.609979 7_1:-45937415 Msa1021530:five_prime_UTR
ATATCCAAGAGAAAACTGCC+TGG 0.612950 7_1:-45937181 Msa1021530:five_prime_UTR
CAGGTGCAGAGAGTTTACTC+AGG 0.614388 7_1:-45932878 Msa1021530:CDS
ACAACTTCTAACAGCATGTG+TGG 0.618875 7_1:-45937145 Msa1021530:exon
GAAAATGTTGAAGATGATGA+CGG 0.623228 7_1:-45932414 Msa1021530:three_prime_UTR
AAAAGGATACGAGAAGGAGA+CGG 0.632375 7_1:+45932198 None:intergenic
TAAGAGCGGTCGCATTGATG+TGG 0.633298 7_1:-45936707 Msa1021530:CDS
CAGACACAGATTCCTTCTAG+AGG 0.633822 7_1:-45931186 Msa1021530:three_prime_UTR
TTAATGGGAGTGATCAAGGA+TGG 0.634063 7_1:-45937520 Msa1021530:five_prime_UTR
TTTCAGAAGCAAAGCATTGG+GGG 0.637841 7_1:+45937204 None:intergenic
AGGTGCAGAGAGTTTACTCA+GGG 0.640679 7_1:-45932877 Msa1021530:CDS
TTAGACAACGTCTCATGGTG+AGG 0.642630 7_1:-45932923 Msa1021530:CDS
GTTGTGGCACCATCATCACC+AGG 0.642882 7_1:+45937163 None:intergenic
TAGCGTGTCAACAGCACGAG+AGG 0.644359 7_1:+45937429 None:intergenic
GCATGTGTGGAATGGAGCAT+GGG 0.646070 7_1:-45937132 Msa1021530:CDS
GCAGATTGAAACATAAATGG+GGG 0.646826 7_1:-45933484 Msa1021530:intron
CGAGAACCAGGATCTTTGCG+TGG 0.646962 7_1:+45934863 None:intergenic
TGCAGATTGAAACATAAATG+GGG 0.654064 7_1:-45933485 Msa1021530:intron
TATTCTCTCATAGCTAAGAG+CGG 0.655427 7_1:-45936721 Msa1021530:intron
CAGATTGAAACATAAATGGG+GGG 0.665936 7_1:-45933483 Msa1021530:CDS
TGTTGAAGATGATGACGGGG+AGG 0.693854 7_1:-45932409 Msa1021530:three_prime_UTR
CAAGGATGGCACAATCTCTG+GGG 0.705821 7_1:-45937506 Msa1021530:five_prime_UTR
TGGGAGGAATACATTCCACA+AGG 0.721506 7_1:-45935183 Msa1021530:CDS
AAATGTTGAAGATGATGACG+GGG 0.749808 7_1:-45932412 Msa1021530:three_prime_UTR
ATATGTTGTTCCTGTCCATG+CGG 0.751876 7_1:-45936868 Msa1021530:CDS
TGAGGCTAATAATAGCGACG+AGG 0.770499 7_1:-45932382 Msa1021530:three_prime_UTR
AGAAGAATACCATATATACG+AGG 0.770848 7_1:-45931258 Msa1021530:three_prime_UTR
TAGTGCACCAGAAATCCCTG+AGG 0.804132 7_1:+45937472 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTCTAGAAAATTATA+CGG - chr7_1:45932023-45932042 Msa1021530:intron 10.0%
!!! GATTTTATTTTATTTCTTTT+AGG + chr7_1:45933395-45933414 None:intergenic 10.0%
!!! GTTCAAATTAATATTTTAAT+AGG - chr7_1:45933931-45933950 Msa1021530:intron 10.0%
!!! TTTAATTTGAAAAAAATCAA+GGG + chr7_1:45934118-45934137 None:intergenic 10.0%
!!! TTTAATTTATGCTTTCAATT+TGG - chr7_1:45930829-45930848 Msa1021530:three_prime_UTR 15.0%
!!! TTTTGAATAAACAAACATTA+AGG + chr7_1:45931594-45931613 None:intergenic 15.0%
!! GAAAAAAAAAAAAATGGAAT+GGG + chr7_1:45931801-45931820 None:intergenic 15.0%
!! TGAAAAAAAAAAAAATGGAA+TGG + chr7_1:45931802-45931821 None:intergenic 15.0%
!!! AATATTCTAGAAAATTATAC+GGG - chr7_1:45932024-45932043 Msa1021530:intron 15.0%
!! CAAATAAACATAATAAGAAA+TGG + chr7_1:45932176-45932195 None:intergenic 15.0%
!!! TATTTTTGTAAAATTTTGAC+TGG - chr7_1:45933774-45933793 Msa1021530:intron 15.0%
!!! CTTTAATTTGAAAAAAATCA+AGG + chr7_1:45934119-45934138 None:intergenic 15.0%
!!! CAAAAAATATTTTCTTCATT+TGG - chr7_1:45935485-45935504 Msa1021530:intron 15.0%
!! TTATTATGTTTAGATTAACT+TGG + chr7_1:45936407-45936426 None:intergenic 15.0%
!! AAAATTACTATATATTGGTA+TGG - chr7_1:45937468-45937487 Msa1021530:five_prime_UTR 15.0%
!!! ATGATAATACAATTTTTATC+TGG - chr7_1:45937516-45937535 Msa1021530:five_prime_UTR 15.0%
!! TGAAATTATTATTGTAGATT+AGG - chr7_1:45938146-45938165 Msa1021530:intron 15.0%
!!! ACAAGAGTTATTAATATTTT+TGG - chr7_1:45938289-45938308 Msa1021530:intron 15.0%
!!! GTTATTAATATTTTTGGATT+TGG - chr7_1:45938295-45938314 Msa1021530:intron 15.0%
!!! CAAAAAAAATCAACTTTTTT+AGG + chr7_1:45938932-45938951 None:intergenic 15.0%
!! TAATGAATTCACATTTCTAA+AGG - chr7_1:45931359-45931378 Msa1021530:intron 20.0%
!! GCAACTGAAAAAAAAAAAAA+TGG + chr7_1:45931807-45931826 None:intergenic 20.0%
!! TTAAATTCTTGCTTTACATA+CGG + chr7_1:45931941-45931960 None:intergenic 20.0%
!! AAACATAATAAGAAATGGAA+AGG + chr7_1:45932171-45932190 None:intergenic 20.0%
!! TGTCGAATAATATCATAAAA+GGG + chr7_1:45932381-45932400 None:intergenic 20.0%
!! TTGTCGAATAATATCATAAA+AGG + chr7_1:45932382-45932401 None:intergenic 20.0%
!! AATTGTAATTGTAATTACCA+TGG + chr7_1:45932652-45932671 None:intergenic 20.0%
!! GGTAATTACAATTACAATTA+TGG - chr7_1:45932653-45932672 Msa1021530:intron 20.0%
!! TAGAATTTAGAAACTTGAAA+TGG - chr7_1:45932988-45933007 Msa1021530:intron 20.0%
!! CCATCATTTAAATATTTGAA+TGG + chr7_1:45933499-45933518 None:intergenic 20.0%
!! CCATTCAAATATTTAAATGA+TGG - chr7_1:45933496-45933515 Msa1021530:intron 20.0%
!!! TCAAATATTTAAATGATGGA+AGG - chr7_1:45933500-45933519 Msa1021530:intron 20.0%
!!! CAAATATTTAAATGATGGAA+GGG - chr7_1:45933501-45933520 Msa1021530:intron 20.0%
!!! TTTCTTTTTTGAACTTGATA+CGG + chr7_1:45933872-45933891 None:intergenic 20.0%
!! AACTAAATTTACCTCAAAAT+GGG + chr7_1:45933914-45933933 None:intergenic 20.0%
!!! ATCATATTTAAAACTTACTG+CGG - chr7_1:45934165-45934184 Msa1021530:intron 20.0%
!!! GTAATTCAAATGCTTTTTAA+TGG + chr7_1:45934358-45934377 None:intergenic 20.0%
!! AGATATGATCAATTATCATT+TGG - chr7_1:45934391-45934410 Msa1021530:intron 20.0%
!! GATATGATCAATTATCATTT+GGG - chr7_1:45934392-45934411 Msa1021530:intron 20.0%
!! ATATGATCAATTATCATTTG+GGG - chr7_1:45934393-45934412 Msa1021530:intron 20.0%
!!! TCTATTTACTATTTTCTGAA+CGG - chr7_1:45934485-45934504 Msa1021530:intron 20.0%
!! GATACATTAAAATCATTACT+TGG - chr7_1:45934580-45934599 Msa1021530:intron 20.0%
!! AAATTCCTAAAAAAGTGAAT+TGG - chr7_1:45934780-45934799 Msa1021530:intron 20.0%
!! AATTCCTAAAAAAGTGAATT+GGG - chr7_1:45934781-45934800 Msa1021530:intron 20.0%
!! CACATTACTCAATATAAAAA+GGG - chr7_1:45935369-45935388 Msa1021530:intron 20.0%
!!! GTTGGATATTTTTTTTATTC+TGG - chr7_1:45935583-45935602 Msa1021530:intron 20.0%
!!! GATATTTTTTTTATTCTGGA+GGG - chr7_1:45935587-45935606 Msa1021530:intron 20.0%
!!! ATATTTTTTTTATTCTGGAG+GGG - chr7_1:45935588-45935607 Msa1021530:intron 20.0%
!!! ATATTTTCTATTAGTAGGAT+TGG - chr7_1:45935623-45935642 Msa1021530:intron 20.0%
!!! TATTTTCTATTAGTAGGATT+GGG - chr7_1:45935624-45935643 Msa1021530:intron 20.0%
!!! ATCAGACTTGTTTAAATTTT+TGG - chr7_1:45936116-45936135 Msa1021530:CDS 20.0%
!! AAATTTAACTGAGATTGTAA+TGG + chr7_1:45936372-45936391 None:intergenic 20.0%
!!! CTGATTTATTTTATCAATTC+TGG - chr7_1:45936854-45936873 Msa1021530:CDS 20.0%
!! GTTATAACTTTCCTAATTAA+TGG - chr7_1:45937371-45937390 Msa1021530:intron 20.0%
!! ATAATGGTTAACCATTAATT+AGG + chr7_1:45937385-45937404 None:intergenic 20.0%
!! ACGTAAAACAATATTAAACT+AGG + chr7_1:45937820-45937839 None:intergenic 20.0%
!!! GTTTAATATTGTTTTACGTT+TGG - chr7_1:45937821-45937840 Msa1021530:intron 20.0%
!! ATATTAATAACTCTTGTTGA+AGG + chr7_1:45938286-45938305 None:intergenic 20.0%
!! GATTAACTTTATGTACATAT+CGG + chr7_1:45938910-45938929 None:intergenic 20.0%
!! ATGTAATCTAATTGATGATC+AGG + chr7_1:45931043-45931062 None:intergenic 25.0%
!! GATTACATTTCTCTTTTGAA+AGG - chr7_1:45931055-45931074 Msa1021530:intron 25.0%
! ATTAAAAATGCAGAATTCGT+TGG + chr7_1:45931151-45931170 None:intergenic 25.0%
!!! TTAAGCTTAATTGATGGATT+TGG + chr7_1:45931196-45931215 None:intergenic 25.0%
! ATCCATCAATTAAGCTTAAA+AGG - chr7_1:45931197-45931216 Msa1021530:three_prime_UTR 25.0%
!! TTCCTTTTAAGCTTAATTGA+TGG + chr7_1:45931202-45931221 None:intergenic 25.0%
!! ACTAATTCTACTGCAATTTT+CGG + chr7_1:45931271-45931290 None:intergenic 25.0%
! ATGACATGATTATGTTGATA+TGG - chr7_1:45931417-45931436 Msa1021530:intron 25.0%
! TGAATAAACAAACATTAAGG+TGG + chr7_1:45931591-45931610 None:intergenic 25.0%
! ATAATTGAGTCGAATTACAT+GGG + chr7_1:45931968-45931987 None:intergenic 25.0%
! AGAATATTAAAATCTGATGC+TGG + chr7_1:45932000-45932019 None:intergenic 25.0%
! TCATTATTTAAGTGCTTCAT+GGG - chr7_1:45932062-45932081 Msa1021530:intron 25.0%
!!! TTTTGTTTTCGAAGTAAAAG+TGG + chr7_1:45932124-45932143 None:intergenic 25.0%
!! TACCTATTACTAAAGTTTTG+GGG + chr7_1:45932237-45932256 None:intergenic 25.0%
!! CTACCTATTACTAAAGTTTT+GGG + chr7_1:45932238-45932257 None:intergenic 25.0%
! TGTAAATCTCAAAATACTAC+TGG + chr7_1:45932343-45932362 None:intergenic 25.0%
!!! TTCTTTTTTGCAAATCATGA+AGG - chr7_1:45933077-45933096 Msa1021530:intron 25.0%
!! AATGTTTGAAGTGTGTTTAA+TGG - chr7_1:45933209-45933228 Msa1021530:intron 25.0%
!!! ATATCTTTTGGAGCAAAAAT+TGG + chr7_1:45933331-45933350 None:intergenic 25.0%
!!! ACTTGTTATAAGAAAAGTCA+TGG - chr7_1:45933442-45933461 Msa1021530:CDS 25.0%
!! TTATTGTAACACTTTTGCTT+TGG - chr7_1:45933750-45933769 Msa1021530:intron 25.0%
! AAGTTCAAAAAAGAAAGAAG+AGG - chr7_1:45933876-45933895 Msa1021530:intron 25.0%
! ACTAAATTTACCTCAAAATG+GGG + chr7_1:45933913-45933932 None:intergenic 25.0%
! GAACTAAATTTACCTCAAAA+TGG + chr7_1:45933915-45933934 None:intergenic 25.0%
!!! ATTTTAATAGGGTGTATTGT+TGG - chr7_1:45933943-45933962 Msa1021530:intron 25.0%
! TATTCGTCAAATATACTAGT+TGG - chr7_1:45933990-45934009 Msa1021530:intron 25.0%
! TCAAATATACTAGTTGGATA+AGG - chr7_1:45933996-45934015 Msa1021530:intron 25.0%
!!! ATATTTTTTGCAGATTGACA+TGG - chr7_1:45934080-45934099 Msa1021530:intron 25.0%
! TTATTCTACTAATTGAGTGT+AGG + chr7_1:45934146-45934165 None:intergenic 25.0%
! ACATAGGGAAAAACAAAAAT+AGG + chr7_1:45934219-45934238 None:intergenic 25.0%
! TATGATCAATTATCATTTGG+GGG - chr7_1:45934394-45934413 Msa1021530:intron 25.0%
! TAAATAGAACATTTCACAAC+AGG + chr7_1:45934473-45934492 None:intergenic 25.0%
!! CTATTTACTATTTTCTGAAC+GGG - chr7_1:45934486-45934505 Msa1021530:intron 25.0%
! AGTAATTCATTGTTAAACAG+TGG - chr7_1:45934551-45934570 Msa1021530:intron 25.0%
!! ATGTGTATTTCACTTTAGAA+AGG - chr7_1:45934700-45934719 Msa1021530:intron 25.0%
!! TTTTCAATAATTTCATTGCC+TGG - chr7_1:45934987-45935006 Msa1021530:intron 25.0%
! CCAATAGTTGTTTACAAATA+AGG + chr7_1:45935161-45935180 None:intergenic 25.0%
!! CCTTATTTGTAAACAACTAT+TGG - chr7_1:45935158-45935177 Msa1021530:CDS 25.0%
!! CCTTTTTATATTGAGTAATG+TGG + chr7_1:45935371-45935390 None:intergenic 25.0%
! CCACATTACTCAATATAAAA+AGG - chr7_1:45935368-45935387 Msa1021530:intron 25.0%
! AAAAACTTACTATGTCCTTA+GGG + chr7_1:45935415-45935434 None:intergenic 25.0%
! TAAAAACTTACTATGTCCTT+AGG + chr7_1:45935416-45935435 None:intergenic 25.0%
!!! GGATATTTTTTTTATTCTGG+AGG - chr7_1:45935586-45935605 Msa1021530:intron 25.0%
!! CAGGAATATTTTCTATTAGT+AGG - chr7_1:45935618-45935637 Msa1021530:intron 25.0%
!! ATTTTCTATTAGTAGGATTG+GGG - chr7_1:45935625-45935644 Msa1021530:intron 25.0%
! TGGATTATAGAATGGAAAAT+AGG + chr7_1:45935688-45935707 None:intergenic 25.0%
! TTTGTTACCTATGTATTGAA+AGG + chr7_1:45935861-45935880 None:intergenic 25.0%
! AAATAATAGAGCTAGATCAA+TGG - chr7_1:45935885-45935904 Msa1021530:CDS 25.0%
! TATCACAAAAACTTCGTAAT+GGG + chr7_1:45936180-45936199 None:intergenic 25.0%
! AAGTGAAGAGAAAGATATAA+TGG - chr7_1:45936343-45936362 Msa1021530:intron 25.0%
! ATGCAGATTGAAACATAAAT+GGG - chr7_1:45936497-45936516 Msa1021530:intron 25.0%
! AAATAAATCAGCAACTTCAT+TGG + chr7_1:45936845-45936864 None:intergenic 25.0%
!! TATTGGGTTGCATTAATTTA+TGG - chr7_1:45936886-45936905 Msa1021530:CDS 25.0%
! ATAATTAACGGAATTTCTTG+CGG + chr7_1:45936969-45936988 None:intergenic 25.0%
! GATGCAACTTAGATAATTAA+CGG + chr7_1:45936981-45937000 None:intergenic 25.0%
!!! TATTTTTGCAGTTTGAATCT+GGG - chr7_1:45937009-45937028 Msa1021530:intron 25.0%
!!! TCTCTTCAATTTTTCAAACT+TGG + chr7_1:45937141-45937160 None:intergenic 25.0%
! CTTCATAATGATATTGCTTT+AGG - chr7_1:45937251-45937270 Msa1021530:five_prime_UTR 25.0%
!!! ATTGCTTTAGGATATAATAG+AGG - chr7_1:45937263-45937282 Msa1021530:five_prime_UTR 25.0%
!! TTTAGGATATAATAGAGGTA+AGG - chr7_1:45937268-45937287 Msa1021530:five_prime_UTR 25.0%
! TTAGGATATAATAGAGGTAA+GGG - chr7_1:45937269-45937288 Msa1021530:five_prime_UTR 25.0%
! TAAAAAAAATCCTTCCAACT+TGG + chr7_1:45937417-45937436 None:intergenic 25.0%
!!! ACAATTTTTATCTGGAACAA+AGG - chr7_1:45937524-45937543 Msa1021530:five_prime_UTR 25.0%
!!! TTAGTTTGTGTTAGCAATTA+TGG - chr7_1:45937694-45937713 Msa1021530:intron 25.0%
!!! AGCAATTATGGTTTTTCAAT+CGG - chr7_1:45937706-45937725 Msa1021530:intron 25.0%
! AAACTAGGTTCAAATAGAAA+AGG + chr7_1:45937805-45937824 None:intergenic 25.0%
! ACATACACATAAACAAAACT+CGG + chr7_1:45937866-45937885 None:intergenic 25.0%
! AATTAACGTTTCTCATTGTT+TGG - chr7_1:45937955-45937974 Msa1021530:intron 25.0%
!!! AATATTTTTGGATTTGGCTT+TGG - chr7_1:45938301-45938320 Msa1021530:intron 25.0%
! AAAGTGAATGTGATTAAAGT+AGG + chr7_1:45938485-45938504 None:intergenic 25.0%
! TTAGGATCTGAAAATTATGA+AGG + chr7_1:45938619-45938638 None:intergenic 25.0%
!!! ATTTTGCTCTTTAGTTTTAG+AGG - chr7_1:45938831-45938850 Msa1021530:intron 25.0%
! ACCTATTAACATCTTTATTG+AGG - chr7_1:45938854-45938873 Msa1021530:intron 25.0%
! ATCTAATCTACATTAAGCTT+AGG + chr7_1:45938987-45939006 None:intergenic 25.0%
! CTTAATGTAGATTAGATCAT+AGG - chr7_1:45938990-45939009 Msa1021530:intron 25.0%
! CAATTAAGTTAAAACTCTGA+TGG + chr7_1:45939019-45939038 None:intergenic 25.0%
!!! AAATTTCTTTTGTTGTGCAA+TGG - chr7_1:45939058-45939077 Msa1021530:intron 25.0%
! ATTATAGAGATGTCTCTATA+AGG - chr7_1:45939099-45939118 Msa1021530:five_prime_UTR 25.0%
!!! ATAAGGTTGATTTGTGTATT+TGG - chr7_1:45939116-45939135 Msa1021530:five_prime_UTR 25.0%
! TTTTCCAATTTCTACATCGT+GGG - chr7_1:45930868-45930887 Msa1021530:three_prime_UTR 30.0%
!! TATTTTTGTGTGTGTGTGTA+TGG - chr7_1:45930988-45931007 Msa1021530:intron 30.0%
! ATTTTTGTGTGTGTGTGTAT+GGG - chr7_1:45930989-45931008 Msa1021530:intron 30.0%
CACTCTAAACTCTAAATTGA+TGG + chr7_1:45931111-45931130 None:intergenic 30.0%
ATTGCAGTAGAATTAGTGTA+TGG - chr7_1:45931274-45931293 Msa1021530:three_prime_UTR 30.0%
TGGAAAATTGACCATGAAAT+TGG - chr7_1:45931294-45931313 Msa1021530:three_prime_UTR 30.0%
GAGTAAGTATTCCAATTTCA+TGG + chr7_1:45931308-45931327 None:intergenic 30.0%
! CACATTTCTAAAGGTAGAAA+TGG - chr7_1:45931368-45931387 Msa1021530:intron 30.0%
TTATCAGTGTAGTTATTGTG+AGG - chr7_1:45931454-45931473 Msa1021530:intron 30.0%
ATATATAATGCTTTACCAGC+AGG - chr7_1:45931492-45931511 Msa1021530:intron 30.0%
TGGATCACACTATTTAATCT+AGG + chr7_1:45931571-45931590 None:intergenic 30.0%
! ACGAGGATTAGTAGATATTA+AGG - chr7_1:45931674-45931693 Msa1021530:intron 30.0%
! CGAGGATTAGTAGATATTAA+GGG - chr7_1:45931675-45931694 Msa1021530:intron 30.0%
ATTCTGATGCTAACTGTTAT+AGG - chr7_1:45931707-45931726 Msa1021530:intron 30.0%
TTCTGATGCTAACTGTTATA+GGG - chr7_1:45931708-45931727 Msa1021530:intron 30.0%
GGGACATGATAAATATTTAG+TGG - chr7_1:45931728-45931747 Msa1021530:intron 30.0%
ATATTTAGTGGCTAACTCTA+TGG - chr7_1:45931740-45931759 Msa1021530:intron 30.0%
!!! TTTTTTTTTTCAGTTGCTGC+TGG - chr7_1:45931810-45931829 Msa1021530:intron 30.0%
GATAATTGAGTCGAATTACA+TGG + chr7_1:45931969-45931988 None:intergenic 30.0%
CTCATTATTTAAGTGCTTCA+TGG - chr7_1:45932061-45932080 Msa1021530:intron 30.0%
! CCTACCTATTACTAAAGTTT+TGG + chr7_1:45932239-45932258 None:intergenic 30.0%
CCAAAACTTTAGTAATAGGT+AGG - chr7_1:45932236-45932255 Msa1021530:intron 30.0%
!! AAGTATTGAAGTCTTGATGA+TGG - chr7_1:45932428-45932447 Msa1021530:three_prime_UTR 30.0%
! AAAACTTGCAAAGTACCTTA+AGG + chr7_1:45932597-45932616 None:intergenic 30.0%
!!! GATTCACATTTTTTTCTCCA+TGG - chr7_1:45932632-45932651 Msa1021530:intron 30.0%
!! ATTTTCAGAAGCAAAGCATT+GGG + chr7_1:45932784-45932803 None:intergenic 30.0%
! TATTTTCAGAAGCAAAGCAT+TGG + chr7_1:45932785-45932804 None:intergenic 30.0%
ACCTTCAAAAAAATAAGCCT+CGG + chr7_1:45932968-45932987 None:intergenic 30.0%
! TTTTGCAAATCATGAAGGAA+TGG - chr7_1:45933082-45933101 Msa1021530:intron 30.0%
ATCACCTAAATGTGTTTCTT+CGG + chr7_1:45933177-45933196 None:intergenic 30.0%
! AAATCTTCTGGCATATCTTT+TGG + chr7_1:45933343-45933362 None:intergenic 30.0%
TAAACGTACAGTAAATCTTC+TGG + chr7_1:45933355-45933374 None:intergenic 30.0%
CACGATAAATGTACATAAGA+CGG + chr7_1:45933528-45933547 None:intergenic 30.0%
TAGTACGACTAAAAACTTCA+TGG + chr7_1:45933675-45933694 None:intergenic 30.0%
!!! TTTTTTGAACTTGATACGGT+AGG + chr7_1:45933868-45933887 None:intergenic 30.0%
CCTCACAATATGTTTAATCA+TGG + chr7_1:45934290-45934309 None:intergenic 30.0%
CCATGATTAAACATATTGTG+AGG - chr7_1:45934287-45934306 Msa1021530:intron 30.0%
! CTTTTTAATGGAAAACTGCA+GGG + chr7_1:45934346-45934365 None:intergenic 30.0%
!! GATCTATTTTTCTCATCACA+AGG - chr7_1:45934444-45934463 Msa1021530:intron 30.0%
! TGAAACATATTGCACTTTTG+TGG - chr7_1:45934732-45934751 Msa1021530:intron 30.0%
CTCATCAAACATTCTAGATA+CGG + chr7_1:45934852-45934871 None:intergenic 30.0%
!! AGTGAGTTTTTAGACCATAT+AGG + chr7_1:45934878-45934897 None:intergenic 30.0%
GAAAAGTCACCTTATTATCA+AGG + chr7_1:45935013-45935032 None:intergenic 30.0%
!! ATTGCTTACTACTTTTCAAG+TGG - chr7_1:45935060-45935079 Msa1021530:CDS 30.0%
! TTTATCCAGAACCTTTGAAA+TGG + chr7_1:45935087-45935106 None:intergenic 30.0%
! ACATTTGCATTCAAAGTGTT+CGG - chr7_1:45935197-45935216 Msa1021530:CDS 30.0%
ATTGTGTGTATTTGATGCAT+TGG - chr7_1:45935440-45935459 Msa1021530:intron 30.0%
AGTCCTTATAAATGACCTTA+GGG - chr7_1:45935508-45935527 Msa1021530:intron 30.0%
!!! TTTGTTTTGTATGAGATCAC+TGG - chr7_1:45935805-45935824 Msa1021530:intron 30.0%
TCTCATGCTTATTGTTAACA+TGG - chr7_1:45935945-45935964 Msa1021530:intron 30.0%
TATATCTTCTCGTAGTTGAT+AGG - chr7_1:45935968-45935987 Msa1021530:intron 30.0%
! TAGGTATTGTGTGTAGTATT+AGG - chr7_1:45935987-45936006 Msa1021530:intron 30.0%
GTATCACAAAAACTTCGTAA+TGG + chr7_1:45936181-45936200 None:intergenic 30.0%
! CAAAGTAGTGAACTGTATTT+TGG - chr7_1:45936255-45936274 Msa1021530:intron 30.0%
CATGCAGATTGAAACATAAA+TGG - chr7_1:45936496-45936515 Msa1021530:intron 30.0%
TGCAGATTGAAACATAAATG+GGG - chr7_1:45936498-45936517 Msa1021530:intron 30.0%
!! GTAATATCTCTCGTTTTTGT+TGG - chr7_1:45936660-45936679 Msa1021530:CDS 30.0%
! TGTTGATTGTTCATGCAAAA+AGG + chr7_1:45936819-45936838 None:intergenic 30.0%
!!! CTATTTTTGCAGTTTGAATC+TGG - chr7_1:45937008-45937027 Msa1021530:intron 30.0%
!!! TTTTAGTTTGTTTGCTTCAG+TGG - chr7_1:45937322-45937341 Msa1021530:intron 30.0%
! TGGTTATTTGTTGCAGAATT+TGG - chr7_1:45937342-45937361 Msa1021530:intron 30.0%
! AACTTGGTTCGTAGTTATAA+TGG + chr7_1:45937401-45937420 None:intergenic 30.0%
ATTATAACTACGAACCAAGT+TGG - chr7_1:45937400-45937419 Msa1021530:intron 30.0%
! TCATCATCTTCAACATTTTC+AGG + chr7_1:45937569-45937588 None:intergenic 30.0%
GAAAATGTTGAAGATGATGA+CGG - chr7_1:45937569-45937588 Msa1021530:intron 30.0%
AAAATGTTGAAGATGATGAC+GGG - chr7_1:45937570-45937589 Msa1021530:intron 30.0%
AAATAGAAAAGGATACGAGA+AGG + chr7_1:45937794-45937813 None:intergenic 30.0%
! AAATTTGAAATGTGAAGCAG+CGG + chr7_1:45937925-45937944 None:intergenic 30.0%
!!! TAAAGATGAGTTTTGGTTCA+AGG + chr7_1:45938041-45938060 None:intergenic 30.0%
! GAAACACTAAAGATGAGTTT+TGG + chr7_1:45938048-45938067 None:intergenic 30.0%
! AGTTCTTTCTTTGACCTTTT+AGG - chr7_1:45938170-45938189 Msa1021530:intron 30.0%
! AGAGTTCAAAGTTAGTTTCA+TGG + chr7_1:45938246-45938265 None:intergenic 30.0%
ATGAAACTAACTTTGAACTC+TGG - chr7_1:45938245-45938264 Msa1021530:intron 30.0%
TGAACTCTGGATAAATTAAG+AGG - chr7_1:45938258-45938277 Msa1021530:intron 30.0%
TCACTTTAACAATCACAATG+AGG - chr7_1:45938498-45938517 Msa1021530:intron 30.0%
GTTAGTGTTCTCAAATATGA+TGG - chr7_1:45938569-45938588 Msa1021530:intron 30.0%
AAGTGGGTCATTGAAATATT+AGG + chr7_1:45938637-45938656 None:intergenic 30.0%
TTTCCATCTGATGAAATTGA+AGG - chr7_1:45938675-45938694 Msa1021530:intron 30.0%
AGAAGAATACCATATATACG+AGG - chr7_1:45938725-45938744 Msa1021530:intron 30.0%
GCCTCAATAAAGATGTTAAT+AGG + chr7_1:45938858-45938877 None:intergenic 30.0%
CATCTCTATAATTAGACTAC+AGG + chr7_1:45939091-45939110 None:intergenic 30.0%
AGGAGTTTGCATAAAAGTTA+TGG - chr7_1:45939167-45939186 Msa1021530:five_prime_UTR 30.0%
! GTTTTCCAATTTCTACATCG+TGG - chr7_1:45930867-45930886 Msa1021530:three_prime_UTR 35.0%
AAAACCCACGATGTAGAAAT+TGG + chr7_1:45930875-45930894 None:intergenic 35.0%
! AATTGATGATCAGGCTGAAT+TGG + chr7_1:45931034-45931053 None:intergenic 35.0%
AGTAAAAGTGGTGTAGTCTA+GGG + chr7_1:45932112-45932131 None:intergenic 35.0%
AAGTAAAAGTGGTGTAGTCT+AGG + chr7_1:45932113-45932132 None:intergenic 35.0%
CACCCCAAAACTTTAGTAAT+AGG - chr7_1:45932232-45932251 Msa1021530:intron 35.0%
AATAGGTAGGAGATATTGAG+AGG - chr7_1:45932249-45932268 Msa1021530:intron 35.0%
ATAGGTAGGAGATATTGAGA+GGG - chr7_1:45932250-45932269 Msa1021530:intron 35.0%
!!! TTTTCAGAAGCAAAGCATTG+GGG + chr7_1:45932783-45932802 None:intergenic 35.0%
TGCTGATAAAGTAGATGAAG+AGG - chr7_1:45932909-45932928 Msa1021530:CDS 35.0%
CCTTCAAAAAAATAAGCCTC+GGG + chr7_1:45932967-45932986 None:intergenic 35.0%
AATTATCTTTGTCCAACGTC+TGG - chr7_1:45933039-45933058 Msa1021530:intron 35.0%
! CCAATTTCTCTTCTTCCTTT+TGG + chr7_1:45933147-45933166 None:intergenic 35.0%
CCAAAAGGAAGAAGAGAAAT+TGG - chr7_1:45933144-45933163 Msa1021530:intron 35.0%
TCACCTAAATGTGTTTCTTC+GGG + chr7_1:45933176-45933195 None:intergenic 35.0%
TATTCTCTCATAGCTAAGAG+CGG - chr7_1:45933262-45933281 Msa1021530:intron 35.0%
!!! TCTTTTGGAGCAAAAATTGG+AGG + chr7_1:45933328-45933347 None:intergenic 35.0%
TATGCAATTGTGCACTGTAT+AGG + chr7_1:45933473-45933492 None:intergenic 35.0%
! TAGCATAAAGGTTTGGTAGA+TGG + chr7_1:45933551-45933570 None:intergenic 35.0%
! AATTGTACATCCCCATTTTG+AGG - chr7_1:45933900-45933919 Msa1021530:intron 35.0%
TGGCAAAATGTTCAATCCTT+TGG - chr7_1:45933963-45933982 Msa1021530:intron 35.0%
GGCAAAATGTTCAATCCTTT+GGG - chr7_1:45933964-45933983 Msa1021530:intron 35.0%
ATTTGACGAATACTACCCAA+AGG + chr7_1:45933982-45934001 None:intergenic 35.0%
TATACTAGTTGGATAAGGTG+TGG - chr7_1:45934001-45934020 Msa1021530:intron 35.0%
AAAAAATCAAGGGCAAGAAC+TGG + chr7_1:45934108-45934127 None:intergenic 35.0%
AAGCATCTCACATTCACATA+GGG + chr7_1:45934234-45934253 None:intergenic 35.0%
! AAAGCATCTCACATTCACAT+AGG + chr7_1:45934235-45934254 None:intergenic 35.0%
! GCTTTTTAATGGAAAACTGC+AGG + chr7_1:45934347-45934366 None:intergenic 35.0%
! TTTTCTGAACGGGAAAGATA+TGG - chr7_1:45934496-45934515 Msa1021530:intron 35.0%
TCCTAAAAAAGTGAATTGGG+AGG - chr7_1:45934784-45934803 Msa1021530:intron 35.0%
!!! TCCTCCCAATTCACTTTTTT+AGG + chr7_1:45934788-45934807 None:intergenic 35.0%
TGTTTGATGAGAAGCCTATA+TGG - chr7_1:45934861-45934880 Msa1021530:CDS 35.0%
TTATGCAGATTCAGCTGATT+AGG - chr7_1:45934957-45934976 Msa1021530:intron 35.0%
! TTTCAAGTGGACCATTTCAA+AGG - chr7_1:45935073-45935092 Msa1021530:CDS 35.0%
!! CAAAGGTTCTGGATAAAGAA+AGG - chr7_1:45935090-45935109 Msa1021530:CDS 35.0%
! CATTTGCATTCAAAGTGTTC+GGG - chr7_1:45935198-45935217 Msa1021530:CDS 35.0%
AGATAAAACCTCAACTCCTT+TGG + chr7_1:45935316-45935335 None:intergenic 35.0%
!! AGGAGTTGAGGTTTTATCTA+AGG - chr7_1:45935317-45935336 Msa1021530:intron 35.0%
AAAAGGGAAATGCTAATGAG+CGG - chr7_1:45935385-45935404 Msa1021530:intron 35.0%
GAGTCCTTATAAATGACCTT+AGG - chr7_1:45935507-45935526 Msa1021530:intron 35.0%
!! TAGTAACTAACTTGCTGATG+TGG + chr7_1:45935562-45935581 None:intergenic 35.0%
ACATCAGCAAGTTAGTTACT+AGG - chr7_1:45935561-45935580 Msa1021530:intron 35.0%
CCTACTACTGGATTATAGAA+TGG + chr7_1:45935696-45935715 None:intergenic 35.0%
CCATTCTATAATCCAGTAGT+AGG - chr7_1:45935693-45935712 Msa1021530:intron 35.0%
ACTGACACTATTAGCAATCA+AGG + chr7_1:45935757-45935776 None:intergenic 35.0%
TTGTGCACCTTTCAATACAT+AGG - chr7_1:45935851-45935870 Msa1021530:intron 35.0%
TAATAGAGCTAGATCAATGG+CGG - chr7_1:45935888-45935907 Msa1021530:CDS 35.0%
! CAAGTAGGATTAGTATTCGA+TGG + chr7_1:45936056-45936075 None:intergenic 35.0%
CATCGAATACTAATCCTACT+TGG - chr7_1:45936054-45936073 Msa1021530:intron 35.0%
CAATATGATGAGAGATCTCT+GGG + chr7_1:45936086-45936105 None:intergenic 35.0%
ACAATATGATGAGAGATCTC+TGG + chr7_1:45936087-45936106 None:intergenic 35.0%
CACGTTTATATGTGAACGAA+AGG - chr7_1:45936291-45936310 Msa1021530:intron 35.0%
GCAGATTGAAACATAAATGG+GGG - chr7_1:45936499-45936518 Msa1021530:intron 35.0%
CAGATTGAAACATAAATGGG+GGG - chr7_1:45936500-45936519 Msa1021530:intron 35.0%
! AAGATGTCTGGAACTTGTAA+GGG + chr7_1:45936548-45936567 None:intergenic 35.0%
! AAAGATGTCTGGAACTTGTA+AGG + chr7_1:45936549-45936568 None:intergenic 35.0%
AATAAATAAGCCTCCAATGC+AGG - chr7_1:45936608-45936627 Msa1021530:intron 35.0%
!!! TTCTTATTTTTCTTGTCCCC+TGG - chr7_1:45936737-45936756 Msa1021530:intron 35.0%
ACCTCATATGCAACCATATA+AGG + chr7_1:45936776-45936795 None:intergenic 35.0%
CATATGAGGTGATGTAAAAG+TGG - chr7_1:45936786-45936805 Msa1021530:intron 35.0%
!! AATTCTGGAATCTGTCGTAT+TGG - chr7_1:45936869-45936888 Msa1021530:CDS 35.0%
!! ATTCTGGAATCTGTCGTATT+GGG - chr7_1:45936870-45936889 Msa1021530:CDS 35.0%
!! CTGGTTTGGGAAATATTGAT+AGG + chr7_1:45937088-45937107 None:intergenic 35.0%
CTATCAATATTTCCCAAACC+AGG - chr7_1:45937086-45937105 Msa1021530:CDS 35.0%
! AATTGAAGAGAGAGTGCAAT+AGG - chr7_1:45937150-45937169 Msa1021530:exon 35.0%
! ATTGAAGAGAGAGTGCAATA+GGG - chr7_1:45937151-45937170 Msa1021530:exon 35.0%
! CAAACTAAAAGTTTTCGCTC+AGG + chr7_1:45937312-45937331 None:intergenic 35.0%
!! TTTTATCTGGAACAAAGGCT+TGG - chr7_1:45937529-45937548 Msa1021530:five_prime_UTR 35.0%
! AAATGTTGAAGATGATGACG+GGG - chr7_1:45937571-45937590 Msa1021530:intron 35.0%
CTCGGACATGATAATAATGA+GGG + chr7_1:45937848-45937867 None:intergenic 35.0%
ACTCGGACATGATAATAATG+AGG + chr7_1:45937849-45937868 None:intergenic 35.0%
! AATTTGAAATGTGAAGCAGC+GGG + chr7_1:45937924-45937943 None:intergenic 35.0%
ACATAACTTACAAGACAAGC+AGG + chr7_1:45938001-45938020 None:intergenic 35.0%
TAATGATTGGAACTGCTTAG+GGG + chr7_1:45938078-45938097 None:intergenic 35.0%
GTAATGATTGGAACTGCTTA+GGG + chr7_1:45938079-45938098 None:intergenic 35.0%
TTCCAATCATTACCACAAGT+TGG - chr7_1:45938086-45938105 Msa1021530:intron 35.0%
! TACCAACTTGTGGTAATGAT+TGG + chr7_1:45938091-45938110 None:intergenic 35.0%
AGTATCATACTACCAACTTG+TGG + chr7_1:45938101-45938120 None:intergenic 35.0%
!! ACAAGTTGGTAGTATGATAC+TGG - chr7_1:45938100-45938119 Msa1021530:intron 35.0%
!! ATTTGGCTTTGGATTAGATG+CGG - chr7_1:45938312-45938331 Msa1021530:intron 35.0%
! GTAGGTTTTCAACTTTCTTC+TGG + chr7_1:45938467-45938486 None:intergenic 35.0%
TACCAAAAGCTCTTGTAAGT+GGG + chr7_1:45938653-45938672 None:intergenic 35.0%
CACTATCTTCCTCGTATATA+TGG + chr7_1:45938737-45938756 None:intergenic 35.0%
!! TCTTTTGTTGTGCAATGGAA+TGG - chr7_1:45939063-45939082 Msa1021530:intron 35.0%
TAGTCAGTCGAATTAGATTG+AGG - chr7_1:45939147-45939166 Msa1021530:five_prime_UTR 35.0%
! TTTCTACATCGTGGGTTTTG+TGG - chr7_1:45930876-45930895 Msa1021530:three_prime_UTR 40.0%
!! TTCTACATCGTGGGTTTTGT+GGG - chr7_1:45930877-45930896 Msa1021530:three_prime_UTR 40.0%
!! GTTTTGTGGGTGCTACAATT+TGG - chr7_1:45930890-45930909 Msa1021530:intron 40.0%
CTGAATTCACGTGAGAGATT+AGG + chr7_1:45930933-45930952 None:intergenic 40.0%
! AATTCGTTGGTCAGGGTTTT+GGG + chr7_1:45931138-45931157 None:intergenic 40.0%
AATGCAGAATTCGTTGGTCA+GGG + chr7_1:45931145-45931164 None:intergenic 40.0%
AAATGCAGAATTCGTTGGTC+AGG + chr7_1:45931146-45931165 None:intergenic 40.0%
TAGTTATTGTGAGGCAGTTC+AGG - chr7_1:45931463-45931482 Msa1021530:intron 40.0%
TATAATGCTTTACCAGCAGG+TGG - chr7_1:45931495-45931514 Msa1021530:intron 40.0%
TACCAGCAGGTGGATATTAT+TGG - chr7_1:45931505-45931524 Msa1021530:intron 40.0%
ACCAGCAGGTGGATATTATT+GGG - chr7_1:45931506-45931525 Msa1021530:intron 40.0%
TAACTCTATGGCTGTAGTGA+GGG - chr7_1:45931752-45931771 Msa1021530:intron 40.0%
CGGACAACATACAATTCTCA+GGG + chr7_1:45931921-45931940 None:intergenic 40.0%
ACGGACAACATACAATTCTC+AGG + chr7_1:45931922-45931941 None:intergenic 40.0%
TAGGTAGGAGATATTGAGAG+GGG - chr7_1:45932251-45932270 Msa1021530:intron 40.0%
ATATTGAGAGGGGAATGAAG+AGG - chr7_1:45932261-45932280 Msa1021530:intron 40.0%
GCATGTGTGATTGTAGGAAA+TGG + chr7_1:45932289-45932308 None:intergenic 40.0%
!! ATTGAAGTCTTGATGATGGC+AGG - chr7_1:45932432-45932451 Msa1021530:three_prime_UTR 40.0%
!! TTGAAGTCTTGATGATGGCA+GGG - chr7_1:45932433-45932452 Msa1021530:three_prime_UTR 40.0%
GAAGTTAATGGGAGTGATCA+AGG - chr7_1:45932459-45932478 Msa1021530:intron 40.0%
TTAATGGGAGTGATCAAGGA+TGG - chr7_1:45932463-45932482 Msa1021530:intron 40.0%
CTTACTGTCATCCTGCATTT+GGG - chr7_1:45932747-45932766 Msa1021530:intron 40.0%
TTACTGTCATCCTGCATTTG+GGG - chr7_1:45932748-45932767 Msa1021530:intron 40.0%
!! TTTCAGAAGCAAAGCATTGG+GGG + chr7_1:45932782-45932801 None:intergenic 40.0%
ATATCCAAGAGAAAACTGCC+TGG - chr7_1:45932802-45932821 Msa1021530:CDS 40.0%
ACACATGCTGTTAGAAGTTG+TGG + chr7_1:45932839-45932858 None:intergenic 40.0%
ACAACTTCTAACAGCATGTG+TGG - chr7_1:45932838-45932857 Msa1021530:CDS 40.0%
TTCTAACAGCATGTGTGGAA+TGG - chr7_1:45932843-45932862 Msa1021530:CDS 40.0%
!!! CCCGAGGCTTATTTTTTTGA+AGG - chr7_1:45932964-45932983 Msa1021530:CDS 40.0%
ATACAATTCAGTCCAGACGT+TGG + chr7_1:45933054-45933073 None:intergenic 40.0%
CATGGACAGGAACAACATAT+TGG + chr7_1:45933115-45933134 None:intergenic 40.0%
ATATGTTGTTCCTGTCCATG+CGG - chr7_1:45933115-45933134 Msa1021530:intron 40.0%
GAACCCGAAGAAACACATTT+AGG - chr7_1:45933170-45933189 Msa1021530:intron 40.0%
TACCAAACCTTTATGCTACC+TGG - chr7_1:45933553-45933572 Msa1021530:intron 40.0%
TACCAGGTAGCATAAAGGTT+TGG + chr7_1:45933558-45933577 None:intergenic 40.0%
ATTCCTTGTCTCTCTACCAT+TGG - chr7_1:45933638-45933657 Msa1021530:intron 40.0%
TTCCTTGTCTCTCTACCATT+GGG - chr7_1:45933639-45933658 Msa1021530:intron 40.0%
TTTGAACTTGATACGGTAGG+TGG + chr7_1:45933865-45933884 None:intergenic 40.0%
CAATGTAGCACTCACATCTT+TGG + chr7_1:45934627-45934646 None:intergenic 40.0%
! AAGGGCTTAAGCTTTTCACA+TGG - chr7_1:45934917-45934936 Msa1021530:CDS 40.0%
TTTCACATGGCATGTTCAGA+AGG - chr7_1:45934930-45934949 Msa1021530:CDS 40.0%
!! ATTGCCTGGCCTTGATAATA+AGG - chr7_1:45935001-45935020 Msa1021530:intron 40.0%
! GACTTTTCAATCCATCTTGC+AGG - chr7_1:45935025-45935044 Msa1021530:intron 40.0%
GTGCCCTAAGGTCATTTATA+AGG + chr7_1:45935514-45935533 None:intergenic 40.0%
!!! GCTGATGTGGCACTTTTTTT+AGG + chr7_1:45935549-45935568 None:intergenic 40.0%
CAGCAAGTTAGTTACTAGGT+TGG - chr7_1:45935565-45935584 Msa1021530:intron 40.0%
TAGAAGAAGACTCCTACTAC+TGG + chr7_1:45935708-45935727 None:intergenic 40.0%
AATAGAGCTAGATCAATGGC+GGG - chr7_1:45935889-45935908 Msa1021530:CDS 40.0%
! CAAAAACTTCGTAATGGGAC+TGG + chr7_1:45936175-45936194 None:intergenic 40.0%
CAACGAACTGTAAAGATGTC+TGG + chr7_1:45936560-45936579 None:intergenic 40.0%
! CATGAAGGTAGAGCCTTATA+TGG - chr7_1:45936760-45936779 Msa1021530:intron 40.0%
GCCTTATATGGTTGCATATG+AGG - chr7_1:45936772-45936791 Msa1021530:intron 40.0%
! TTTTGCAGTTTGAATCTGGG+TGG - chr7_1:45937012-45937031 Msa1021530:intron 40.0%
! TAACTACGAACCAAGTTGGA+AGG - chr7_1:45937404-45937423 Msa1021530:intron 40.0%
GTCAGAAGAAGAACTTGATC+TGG - chr7_1:45937625-45937644 Msa1021530:intron 40.0%
AAAAGGATACGAGAAGGAGA+CGG + chr7_1:45937788-45937807 None:intergenic 40.0%
! ATTTGAAATGTGAAGCAGCG+GGG + chr7_1:45937923-45937942 None:intergenic 40.0%
TCTTGTAAGTTATGTCTCCC+TGG - chr7_1:45938006-45938025 Msa1021530:intron 40.0%
GGTAATGATTGGAACTGCTT+AGG + chr7_1:45938080-45938099 None:intergenic 40.0%
!! CAGTGTCCAGTGTATTTTGA+TGG - chr7_1:45938427-45938446 Msa1021530:intron 40.0%
TGCATGCCATCAAAATACAC+TGG + chr7_1:45938436-45938455 None:intergenic 40.0%
! AATATGATGGAAAAGCCTGC+TGG - chr7_1:45938582-45938601 Msa1021530:intron 40.0%
CTACCAAAAGCTCTTGTAAG+TGG + chr7_1:45938654-45938673 None:intergenic 40.0%
TCGCCTTCAATTTCATCAGA+TGG + chr7_1:45938681-45938700 None:intergenic 40.0%
! ATTCCTTCTAGAGGTGTAAC+TGG - chr7_1:45938806-45938825 Msa1021530:intron 40.0%
ACTTCAACAAACGCTAATGC+TGG + chr7_1:45938880-45938899 None:intergenic 40.0%
! GATCAGGCTGAATTGGTTCA+CGG + chr7_1:45931027-45931046 None:intergenic 45.0%
! GAATTCGTTGGTCAGGGTTT+TGG + chr7_1:45931139-45931158 None:intergenic 45.0%
TCCTCTCTCTTTCCATGTTC+TGG - chr7_1:45931245-45931264 Msa1021530:three_prime_UTR 45.0%
! TGCAATTTTCGGCCAGAACA+TGG + chr7_1:45931260-45931279 None:intergenic 45.0%
GGATATTATTGGGCACACTC+AGG - chr7_1:45931516-45931535 Msa1021530:intron 45.0%
CTAACTCTATGGCTGTAGTG+AGG - chr7_1:45931751-45931770 Msa1021530:intron 45.0%
GTGTGTGCATGTGTGATTGT+AGG + chr7_1:45932295-45932314 None:intergenic 45.0%
ACACATGCACACACTGACAT+TGG - chr7_1:45932301-45932320 Msa1021530:intron 45.0%
ATGCACACACTGACATTGGT+CGG - chr7_1:45932305-45932324 Msa1021530:intron 45.0%
GACATTGGTCGGAAGTAGAA+CGG - chr7_1:45932316-45932335 Msa1021530:intron 45.0%
ATGGCAGGGCTAGAAGTTAA+TGG - chr7_1:45932447-45932466 Msa1021530:intron 45.0%
TGGCAGGGCTAGAAGTTAAT+GGG - chr7_1:45932448-45932467 Msa1021530:intron 45.0%
ATCAAGGATGGCACAATCTC+TGG - chr7_1:45932475-45932494 Msa1021530:intron 45.0%
TCAAGGATGGCACAATCTCT+GGG - chr7_1:45932476-45932495 Msa1021530:intron 45.0%
GAGGTTGAAGATGGATAACC+AGG + chr7_1:45932538-45932557 None:intergenic 45.0%
! TGGAAGTCAAGGCATCCTTA+AGG - chr7_1:45932579-45932598 Msa1021530:intron 45.0%
ATTAGAGCTTCGATTTCGCC+CGG - chr7_1:45932718-45932737 Msa1021530:intron 45.0%
GATGACAGTAAGGATCTTCC+GGG + chr7_1:45932739-45932758 None:intergenic 45.0%
GGATGACAGTAAGGATCTTC+CGG + chr7_1:45932740-45932759 None:intergenic 45.0%
CCAAATGCAGGATGACAGTA+AGG + chr7_1:45932749-45932768 None:intergenic 45.0%
CCTTACTGTCATCCTGCATT+TGG - chr7_1:45932746-45932765 Msa1021530:intron 45.0%
! ATCACCAGGCAGTTTTCTCT+TGG + chr7_1:45932809-45932828 None:intergenic 45.0%
! AGAAAACTGCCTGGTGATGA+TGG - chr7_1:45932811-45932830 Msa1021530:CDS 45.0%
! GATAGTGTTGAAAGCGAGCA+TGG - chr7_1:45932883-45932902 Msa1021530:CDS 45.0%
CTCTCTACCAGGTAGCATAA+AGG + chr7_1:45933563-45933582 None:intergenic 45.0%
CTTTATGCTACCTGGTAGAG+AGG - chr7_1:45933561-45933580 Msa1021530:intron 45.0%
AGAGGCTTGGGGAATTTAGA+TGG - chr7_1:45933579-45933598 Msa1021530:intron 45.0%
ATAAGGTGTGGCTGTTGTTG+TGG - chr7_1:45934013-45934032 Msa1021530:intron 45.0%
TGGGAGGAATACATTCCACA+AGG - chr7_1:45934800-45934819 Msa1021530:intron 45.0%
TACTGAACGCTTGCTCGATA+AGG - chr7_1:45934898-45934917 Msa1021530:CDS 45.0%
ACTGAACGCTTGCTCGATAA+GGG - chr7_1:45934899-45934918 Msa1021530:CDS 45.0%
GTCACCTTATTATCAAGGCC+AGG + chr7_1:45935008-45935027 None:intergenic 45.0%
CTAGATAGAAGCCTGCAAGA+TGG + chr7_1:45935039-45935058 None:intergenic 45.0%
GTGGACCATTTCAAAGGTTC+TGG - chr7_1:45935079-45935098 Msa1021530:CDS 45.0%
GGCTATGAGCCTATGATAGT+AGG - chr7_1:45935290-45935309 Msa1021530:intron 45.0%
AGCCTATGATAGTAGGCCAA+AGG - chr7_1:45935297-45935316 Msa1021530:intron 45.0%
CTCCTTTGGCCTACTATCAT+AGG + chr7_1:45935302-45935321 None:intergenic 45.0%
ATAGTAGGCCAAAGGAGTTG+AGG - chr7_1:45935305-45935324 Msa1021530:intron 45.0%
TTGAGTAATGTGGCACTCTC+TGG + chr7_1:45935361-45935380 None:intergenic 45.0%
! TTTTGCTAACGAGTGCCCTA+AGG + chr7_1:45935526-45935545 None:intergenic 45.0%
ATAGAGCTAGATCAATGGCG+GGG - chr7_1:45935890-45935909 Msa1021530:CDS 45.0%
! CTTGTAAGGGAAAGCACGAA+AGG + chr7_1:45936535-45936554 None:intergenic 45.0%
CTGTCTTAGACAACGTCTCA+TGG - chr7_1:45937055-45937074 Msa1021530:CDS 45.0%
TTAGACAACGTCTCATGGTG+AGG - chr7_1:45937060-45937079 Msa1021530:CDS 45.0%
AAACTCTCTGCACCTGGTTT+GGG + chr7_1:45937101-45937120 None:intergenic 45.0%
TAAACTCTCTGCACCTGGTT+TGG + chr7_1:45937102-45937121 None:intergenic 45.0%
AGGTGCAGAGAGTTTACTCA+GGG - chr7_1:45937106-45937125 Msa1021530:CDS 45.0%
! AGCCATGAAGCTTTGTGTAG+AGG - chr7_1:45937175-45937194 Msa1021530:five_prime_UTR 45.0%
CTCCTCTACACAAAGCTTCA+TGG + chr7_1:45937180-45937199 None:intergenic 45.0%
!! CCTAACCTGTATTAGCTTGC+TGG + chr7_1:45937205-45937224 None:intergenic 45.0%
CCAGCAAGCTAATACAGGTT+AGG - chr7_1:45937202-45937221 Msa1021530:five_prime_UTR 45.0%
TGAGGCTAATAATAGCGACG+AGG - chr7_1:45937601-45937620 Msa1021530:intron 45.0%
ATGTTGTTGCTCGTGTAGAC+AGG - chr7_1:45937743-45937762 Msa1021530:intron 45.0%
CATTGTTTGGCTACCAGACA+AGG - chr7_1:45937968-45937987 Msa1021530:intron 45.0%
GTTCAAGGACATACACTCCA+GGG + chr7_1:45938026-45938045 None:intergenic 45.0%
ATTGGAACTGCTTAGGGGAA+AGG + chr7_1:45938073-45938092 None:intergenic 45.0%
CCATGTGAGTCACACCTAAA+AGG + chr7_1:45938187-45938206 None:intergenic 45.0%
!! CCTTTTAGGTGTGACTCACA+TGG - chr7_1:45938184-45938203 Msa1021530:intron 45.0%
TGTGACTCACATGGTTAGAC+AGG - chr7_1:45938193-45938212 Msa1021530:intron 45.0%
TCACATGGTTAGACAGGTAG+TGG - chr7_1:45938199-45938218 Msa1021530:intron 45.0%
! AAGGAATTCAAAGTGCCAGC+AGG + chr7_1:45938600-45938619 None:intergenic 45.0%
! GACCCACTTACAAGAGCTTT+TGG - chr7_1:45938648-45938667 Msa1021530:intron 45.0%
CAGACACAGATTCCTTCTAG+AGG - chr7_1:45938797-45938816 Msa1021530:intron 45.0%
TCTCCAGTTACACCTCTAGA+AGG + chr7_1:45938812-45938831 None:intergenic 45.0%
!!! ATTTTATTTTATTTCTTTTA+GGG + chr7_1:45933394-45933413 None:intergenic 5.0%
!!! TTCAAATTAATATTTTAATA+GGG - chr7_1:45933932-45933951 Msa1021530:intron 5.0%
!! TAATAAAAATTACTATATAT+TGG - chr7_1:45937463-45937482 Msa1021530:five_prime_UTR 5.0%
GCCAGAACATGGAAAGAGAG+AGG + chr7_1:45931249-45931268 None:intergenic 50.0%
GCCCAATAATATCCACCTGC+TGG + chr7_1:45931510-45931529 None:intergenic 50.0%
CTTGACAGTTCAGTGTCACG+AGG - chr7_1:45931657-45931676 Msa1021530:intron 50.0%
! AAGTGGTGTAGTCTAGGGTG+AGG + chr7_1:45932107-45932126 None:intergenic 50.0%
CAAGGATGGCACAATCTCTG+GGG - chr7_1:45932477-45932496 Msa1021530:intron 50.0%
!! CACAATCTCTGGGGTTCTAC+CGG - chr7_1:45932486-45932505 Msa1021530:intron 50.0%
TAGTGCACCAGAAATCCCTG+AGG + chr7_1:45932514-45932533 None:intergenic 50.0%
!! GGATTTCTGGTGCACTATCC+TGG - chr7_1:45932517-45932536 Msa1021530:intron 50.0%
ACAGCACGAGAGGTTGAAGA+TGG + chr7_1:45932547-45932566 None:intergenic 50.0%
GATTGTGAACTGCGAGCCTA+CGG + chr7_1:45932692-45932711 None:intergenic 50.0%
AGCATGTGTGGAATGGAGCA+TGG - chr7_1:45932850-45932869 Msa1021530:CDS 50.0%
GCATGTGTGGAATGGAGCAT+GGG - chr7_1:45932851-45932870 Msa1021530:CDS 50.0%
TATTGTTGCTCGTGTTCCCG+AGG - chr7_1:45932948-45932967 Msa1021530:CDS 50.0%
TCCATGCGGATGTTGCCAAA+AGG - chr7_1:45933129-45933148 Msa1021530:intron 50.0%
! TCCTTTTGGCAACATCCGCA+TGG + chr7_1:45933133-45933152 None:intergenic 50.0%
! TAAGAGCGGTCGCATTGATG+TGG - chr7_1:45933276-45933295 Msa1021530:intron 50.0%
CACCCAATGGTAGAGAGACA+AGG + chr7_1:45933644-45933663 None:intergenic 50.0%
CTTGTCTCTCTACCATTGGG+TGG - chr7_1:45933642-45933661 Msa1021530:intron 50.0%
TCTCTCTACCATTGGGTGGT+TGG - chr7_1:45933646-45933665 Msa1021530:intron 50.0%
AGAGCAGTGGGAGTCACAAA+TGG - chr7_1:45934826-45934845 Msa1021530:intron 50.0%
TACGATCCACGCAAAGATCC+TGG - chr7_1:45935114-45935133 Msa1021530:CDS 50.0%
ACGTCTTACATGCGAGAACC+AGG + chr7_1:45935135-45935154 None:intergenic 50.0%
TGATATGCATGACCAGCCCA+TGG - chr7_1:45935257-45935276 Msa1021530:intron 50.0%
CATGACCAGCCCATGGATTT+GGG - chr7_1:45935264-45935283 Msa1021530:intron 50.0%
ATAGCCCAGCCCAAATCCAT+GGG + chr7_1:45935276-45935295 None:intergenic 50.0%
! ATTCTGGAGGGGACTTCATC+AGG - chr7_1:45935599-45935618 Msa1021530:intron 50.0%
AGCAACAGCTTCCTCACCAA+GGG + chr7_1:45935656-45935675 None:intergenic 50.0%
TAGAGCTAGATCAATGGCGG+GGG - chr7_1:45935891-45935910 Msa1021530:CDS 50.0%
ACTGTGCAAGTGTCCTGCAT+TGG + chr7_1:45936624-45936643 None:intergenic 50.0%
TGCAGGACACTTGCACAGTA+AGG - chr7_1:45936625-45936644 Msa1021530:intron 50.0%
TTTCTTGTCCCCTGGCATGA+AGG - chr7_1:45936745-45936764 Msa1021530:intron 50.0%
AAGGCTCTACCTTCATGCCA+GGG + chr7_1:45936757-45936776 None:intergenic 50.0%
TAAGGCTCTACCTTCATGCC+AGG + chr7_1:45936758-45936777 None:intergenic 50.0%
CTGAGTAAACTCTCTGCACC+TGG + chr7_1:45937107-45937126 None:intergenic 50.0%
CAGGTGCAGAGAGTTTACTC+AGG - chr7_1:45937105-45937124 Msa1021530:CDS 50.0%
!! TGTTGAAGATGATGACGGGG+AGG - chr7_1:45937574-45937593 Msa1021530:intron 50.0%
AGCGGGGTAGCTTCAATTAC+AGG + chr7_1:45937907-45937926 None:intergenic 50.0%
AGCAGGTTCAATGCCTTGTC+TGG + chr7_1:45937984-45938003 None:intergenic 50.0%
GGTTCAAGGACATACACTCC+AGG + chr7_1:45938027-45938046 None:intergenic 50.0%
! CATGGTTAGACAGGTAGTGG+TGG - chr7_1:45938202-45938221 Msa1021530:intron 50.0%
GGCGACAAAGCGCAAGAAAA+TGG - chr7_1:45938696-45938715 Msa1021530:intron 50.0%
GGGAAGAGACTACGTCTCAG+TGG + chr7_1:45931781-45931800 None:intergenic 55.0%
ACCAGAAATCCCTGAGGCTC+CGG + chr7_1:45932508-45932527 None:intergenic 55.0%
TAGCGTGTCAACAGCACGAG+AGG + chr7_1:45932557-45932576 None:intergenic 55.0%
! TCTCGTGCTGTTGACACGCT+AGG - chr7_1:45932556-45932575 Msa1021530:intron 55.0%
GACACGCTAGGTGGAAGTCA+AGG - chr7_1:45932568-45932587 Msa1021530:intron 55.0%
! TGGCCTTGCTCGTAATCCGT+AGG - chr7_1:45932673-45932692 Msa1021530:intron 55.0%
! GAGCCTACGGATTACGAGCA+AGG + chr7_1:45932679-45932698 None:intergenic 55.0%
GTTGTGGCACCATCATCACC+AGG + chr7_1:45932823-45932842 None:intergenic 55.0%
TTGGCAACATCCGCATGGAC+AGG + chr7_1:45933128-45933147 None:intergenic 55.0%
TGCTACCTGGTAGAGAGGCT+TGG - chr7_1:45933566-45933585 Msa1021530:intron 55.0%
GCTACCTGGTAGAGAGGCTT+GGG - chr7_1:45933567-45933586 Msa1021530:intron 55.0%
CTACCTGGTAGAGAGGCTTG+GGG - chr7_1:45933568-45933587 Msa1021530:intron 55.0%
ATTCCCCAAGCCTCTCTACC+AGG + chr7_1:45933574-45933593 None:intergenic 55.0%
CTCTACCATTGGGTGGTTGG+TGG - chr7_1:45933649-45933668 Msa1021530:intron 55.0%
TTCCACAAGGCTCAGAGCAG+TGG - chr7_1:45934813-45934832 Msa1021530:intron 55.0%
TCCACAAGGCTCAGAGCAGT+GGG - chr7_1:45934814-45934833 Msa1021530:intron 55.0%
CGAGAACCAGGATCTTTGCG+TGG + chr7_1:45935123-45935142 None:intergenic 55.0%
GCATGACCAGCCCATGGATT+TGG - chr7_1:45935263-45935282 Msa1021530:intron 55.0%
CATAGCCCAGCCCAAATCCA+TGG + chr7_1:45935277-45935296 None:intergenic 55.0%
! CTAATGAGCGGAGTGCCCTA+AGG - chr7_1:45935397-45935416 Msa1021530:intron 55.0%
CAGCTTCCTCACCAAGGGAA+CGG + chr7_1:45935651-45935670 None:intergenic 55.0%
CAGCAACAGCTTCCTCACCA+AGG + chr7_1:45935657-45935676 None:intergenic 55.0%
GTGAGGAAGCTGTTGCTGTG+TGG - chr7_1:45935659-45935678 Msa1021530:intron 55.0%
GATGAGAGATCTCTGGGTCG+TGG + chr7_1:45936080-45936099 None:intergenic 55.0%
GTGCAAGTGTCCTGCATTGG+AGG + chr7_1:45936621-45936640 None:intergenic 55.0%
AGGCTCTACCTTCATGCCAG+GGG + chr7_1:45936756-45936775 None:intergenic 55.0%
GAGCGCCAGCAAGCTAATAC+AGG - chr7_1:45937197-45937216 Msa1021530:five_prime_UTR 55.0%
ATACGAGAAGGAGACGGCAG+TGG + chr7_1:45937782-45937801 None:intergenic 55.0%
GGAACTGCTTAGGGGAAAGG+TGG + chr7_1:45938070-45938089 None:intergenic 55.0%
ACCGGAGCCTCAGGGATTTC+TGG - chr7_1:45932504-45932523 Msa1021530:intron 60.0%
! CGTGCTGTTGACACGCTAGG+TGG - chr7_1:45932559-45932578 Msa1021530:intron 60.0%
CATGGCCACCAACCACCCAA+TGG + chr7_1:45933657-45933676 None:intergenic 60.0%
! TCCCACTGCTCTGAGCCTTG+TGG + chr7_1:45934818-45934837 None:intergenic 60.0%
ACCAGCCCATGGATTTGGGC+TGG - chr7_1:45935268-45935287 Msa1021530:intron 60.0%
CCAGCCCATGGATTTGGGCT+GGG - chr7_1:45935269-45935288 Msa1021530:intron 60.0%
TAGGATTGGGGCCGTTCCCT+TGG - chr7_1:45935637-45935656 Msa1021530:intron 60.0%
TCTCTGGGTCGTGGCCAAGT+AGG + chr7_1:45936071-45936090 None:intergenic 60.0%
TGGGGTTCTACCGGAGCCTC+AGG - chr7_1:45932495-45932514 Msa1021530:intron 65.0%
GGGGTTCTACCGGAGCCTCA+GGG - chr7_1:45932496-45932515 Msa1021530:intron 65.0%
GGACGACGCTCCCCAAATGC+AGG + chr7_1:45932761-45932780 None:intergenic 65.0%
CCCAGCCCAAATCCATGGGC+TGG + chr7_1:45935272-45935291 None:intergenic 65.0%
TTGGGGCCGTTCCCTTGGTG+AGG - chr7_1:45935642-45935661 Msa1021530:intron 65.0%
!! TGATGACGGGGAGGCAGCTG+AGG - chr7_1:45937583-45937602 Msa1021530:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 45930805 45939200 45930805 ID=Msa1021530;Name=Msa1021530
chr7_1 mRNA 45930805 45939200 45930805 ID=Msa1021530-mRNA-1;Parent=Msa1021530;Name=Msa1021530-mRNA-1;_AED=0.24;_eAED=0.24;_QI=412|1|1|1|0.6|0.5|16|497|370
chr7_1 exon 45930805 45930899 45930805 ID=Msa1021530-mRNA-1:exon:9120;Parent=Msa1021530-mRNA-1
chr7_1 exon 45931118 45931373 45931118 ID=Msa1021530-mRNA-1:exon:9119;Parent=Msa1021530-mRNA-1
chr7_1 exon 45932208 45932244 45932208 ID=Msa1021530-mRNA-1:exon:9118;Parent=Msa1021530-mRNA-1
chr7_1 exon 45932359 45932459 45932359 ID=Msa1021530-mRNA-1:exon:9117;Parent=Msa1021530-mRNA-1
chr7_1 exon 45932774 45932985 45932774 ID=Msa1021530-mRNA-1:exon:9116;Parent=Msa1021530-mRNA-1
chr7_1 exon 45933364 45933502 45933364 ID=Msa1021530-mRNA-1:exon:9115;Parent=Msa1021530-mRNA-1
chr7_1 exon 45933790 45933858 45933790 ID=Msa1021530-mRNA-1:exon:9114;Parent=Msa1021530-mRNA-1
chr7_1 exon 45934860 45934958 45934860 ID=Msa1021530-mRNA-1:exon:9113;Parent=Msa1021530-mRNA-1
chr7_1 exon 45935054 45935225 45935054 ID=Msa1021530-mRNA-1:exon:9112;Parent=Msa1021530-mRNA-1
chr7_1 exon 45935867 45935912 45935867 ID=Msa1021530-mRNA-1:exon:9111;Parent=Msa1021530-mRNA-1
chr7_1 exon 45936084 45936150 45936084 ID=Msa1021530-mRNA-1:exon:9110;Parent=Msa1021530-mRNA-1
chr7_1 exon 45936640 45936730 45936640 ID=Msa1021530-mRNA-1:exon:9109;Parent=Msa1021530-mRNA-1
chr7_1 exon 45936814 45936906 45936814 ID=Msa1021530-mRNA-1:exon:9108;Parent=Msa1021530-mRNA-1
chr7_1 exon 45937020 45937310 45937020 ID=Msa1021530-mRNA-1:exon:9107;Parent=Msa1021530-mRNA-1
chr7_1 exon 45937405 45937551 45937405 ID=Msa1021530-mRNA-1:exon:9106;Parent=Msa1021530-mRNA-1
chr7_1 exon 45939094 45939200 45939094 ID=Msa1021530-mRNA-1:exon:9105;Parent=Msa1021530-mRNA-1
chr7_1 five_prime_UTR 45939094 45939200 45939094 ID=Msa1021530-mRNA-1:five_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 five_prime_UTR 45937405 45937551 45937405 ID=Msa1021530-mRNA-1:five_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 five_prime_UTR 45937153 45937310 45937153 ID=Msa1021530-mRNA-1:five_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45937020 45937152 45937020 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45936814 45936906 45936814 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45936640 45936730 45936640 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45936084 45936150 45936084 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45935867 45935912 45935867 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45935054 45935225 45935054 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45934860 45934958 45934860 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45933790 45933858 45933790 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45933364 45933502 45933364 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 CDS 45932782 45932985 45932782 ID=Msa1021530-mRNA-1:cds;Parent=Msa1021530-mRNA-1
chr7_1 three_prime_UTR 45932774 45932781 45932774 ID=Msa1021530-mRNA-1:three_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 three_prime_UTR 45932359 45932459 45932359 ID=Msa1021530-mRNA-1:three_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 three_prime_UTR 45932208 45932244 45932208 ID=Msa1021530-mRNA-1:three_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 three_prime_UTR 45931118 45931373 45931118 ID=Msa1021530-mRNA-1:three_prime_utr;Parent=Msa1021530-mRNA-1
chr7_1 three_prime_UTR 45930805 45930899 45930805 ID=Msa1021530-mRNA-1:three_prime_utr;Parent=Msa1021530-mRNA-1
Gene Sequence

>Msa1021530

ATGTGTGGAATGGAGCATGGGATGCAAGCAGATAGTGTTGAAAGCGAGCATGGAGCTGCTGATAAAGTAGATGAAGAGGCAAATCTCTGTGCTGATATTGTTGCTCGTGTTCCCGAGGCTTATTTTTTTGAAGGAATGGCAGACTACCAATATGTTGTTCCTGTCCATGCGGATGTTGCCAAAAGGAAGAAGAGAAATTGGTCAGAACCCGAAGAAACACATTTAGCTAAGAGCGGTCGCATTGATGTGGATCATGAAGATATTATGATCATAGTGCCTCCAATTTTTGCTCCAAAAGATATGCCAGAAGATTTACTCTTACGACCACCTACCGTATCAAGTTCAAAAAAGAAAGAAGAGGAAATTGTACATCCCCATTTTGAGATTGACATGGAGCCAGTTCTTGCCCTTGATTTTTTTCAAATTAAAGAAATTCCTAAAAAAGTGAATTGGGAGGAATACATTCCACAAGGCTCAGAGCAGTGGGAGTCACAAATGGCCGTATCTAGAATGTTTGATGAGAAGCCTATATGGTCTAAAAACTCACTTACTGAACGCTTGCTCGATAAGGGCTTAAGCTTTTCACATGGCATGTTCAGAAGGCTTCTATCTAGAATTGCTTACTACTTTTCAAGTGGACCATTTCAAAGGTTCTGGATAAAGAAAGGATACGATCCACGCAAAGATCCTGGTTCTCGCATTTATCAAAGAATTGATTATCGAGTACCAGTCCCATTACGAAGTTTTTGTGATACTTACTCAGCAGATAAATTGAAACATAAATGGGGGGATATATGTGCCTTTCGTGCTTTCCCTTACAAGTTCCAGACATCTTTACAGTTCGTTGAGCTTGTTGATGATTATATTCAATCTGAAATAAATAAGCCTCCAATGCAGGACACTTGCACATTTGAATCTGGGTGGTTCTCACTCAACAAGATTAACTGTCTTAGACAACGTCTCATGGTGAGGTACCTATCAATATTTCCCAAACCAGGTGCAGAGAGTTTACTCAGGGTTGCTGCTTCCAAGTTTGAAAAATTGAAGAGAGAGTGCAATAGGGAAGCCATGAAGCTTTGTGTAGAGGAGCGCCAGCAAGCTAATACAGGTTAG

Protein sequence

>Msa1021530

MCGMEHGMQADSVESEHGAADKVDEEANLCADIVARVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPEETHLAKSGRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALDFFQIKEIPKKVNWEEYIPQGSEQWESQMAVSRMFDEKPIWSKNSLTERLLDKGLSFSHGMFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPGSRIYQRIDYRVPVPLRSFCDTYSADKLKHKWGDICAFRAFPYKFQTSLQFVELVDDYIQSEINKPPMQDTCTFESGWFSLNKINCLRQRLMVRYLSIFPKPGAESLLRVAASKFEKLKRECNREAMKLCVEERQQANTG*