AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1025790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025790 MtrunA17_Chr7g0243631 76.000 400 63 1 1 367 97 496 0.0 618
Msa1025790 MtrunA17_Chr7g0243681 76.190 399 57 2 1 366 95 488 0.0 614
Msa1025790 MtrunA17_Chr7g0243801 68.500 400 87 4 1 366 91 485 0.0 552
Msa1025790 MtrunA17_Chr7g0243771 68.250 400 88 4 1 366 90 484 0.0 551
Msa1025790 MtrunA17_Chr4g0060511 69.576 401 87 3 1 367 98 497 0.0 549
Msa1025790 MtrunA17_Chr7g0243861 68.828 401 90 3 1 367 98 497 0.0 544
Msa1025790 MtrunA17_Chr7g0243951 66.914 405 98 4 1 371 95 497 0.0 540
Msa1025790 MtrunA17_Chr7g0243931 65.926 405 103 3 1 371 101 504 0.0 534
Msa1025790 MtrunA17_Chr7g0235051 69.409 389 55 4 1 356 95 452 0.0 522
Msa1025790 MtrunA17_Chr7g0243761 67.332 401 68 3 1 368 95 465 1.82e-176 499
Msa1025790 MtrunA17_Chr7g0243871 63.980 397 100 4 1 364 93 479 4.05e-170 483
Msa1025790 MtrunA17_Chr7g0243781 62.500 392 121 3 1 366 93 484 1.76e-161 461
Msa1025790 MtrunA17_Chr7g0243851 59.500 400 85 4 1 366 95 451 1.82e-161 460
Msa1025790 MtrunA17_Chr7g0243611 70.740 311 43 3 32 309 1 296 1.23e-155 439
Msa1025790 MtrunA17_Chr7g0243711 78.947 247 51 1 121 367 81 326 2.08e-138 397
Msa1025790 MtrunA17_Chr5g0401851 50.500 400 161 3 1 365 94 491 5.35e-136 397
Msa1025790 MtrunA17_Chr8g0355221 48.608 395 167 3 4 364 101 493 2.76e-128 377
Msa1025790 MtrunA17_Chr1g0165701 47.015 402 178 3 4 373 101 499 1.27e-125 371
Msa1025790 MtrunA17_Chr5g0416741 47.512 402 175 5 4 372 100 498 2.16e-117 350
Msa1025790 MtrunA17_Chr7g0243811 56.563 320 109 3 1 295 73 387 5.97e-111 329
Msa1025790 MtrunA17_Chr6g0463891 45.658 403 181 6 1 368 96 495 6.71e-110 330
Msa1025790 MtrunA17_Chr5g0416821 44.898 392 165 5 11 367 108 483 4.66e-107 323
Msa1025790 MtrunA17_Chr7g0243911 75.743 202 48 1 141 342 15 215 4.08e-104 306
Msa1025790 MtrunA17_Chr8g0366391 41.103 399 187 9 9 369 101 489 9.70e-90 278
Msa1025790 MtrunA17_Chr4g0044511 40.561 392 193 9 2 359 121 506 1.49e-89 278
Msa1025790 MtrunA17_Chr4g0044501 43.291 395 177 12 11 369 104 487 7.48e-89 276
Msa1025790 MtrunA17_Chr4g0044521 40.811 370 181 7 24 360 105 469 3.49e-79 250
Msa1025790 MtrunA17_Chr4g0066151 37.905 401 194 9 4 364 101 486 5.42e-79 251
Msa1025790 MtrunA17_Chr4g0066131 38.213 403 194 10 4 366 96 483 1.93e-77 246
Msa1025790 MtrunA17_Chr4g0066221 37.811 402 205 10 3 366 95 489 9.42e-77 245
Msa1025790 MtrunA17_Chr4g0066201 38.889 396 197 11 4 365 98 482 1.25e-76 244
Msa1025790 MtrunA17_Chr8g0374901 38.384 396 208 8 3 366 96 487 3.79e-76 243
Msa1025790 MtrunA17_Chr4g0066261 37.346 407 201 11 3 366 95 490 4.04e-76 243
Msa1025790 MtrunA17_Chr8g0374971 37.113 388 210 6 11 366 104 489 6.63e-73 235
Msa1025790 MtrunA17_Chr7g0265151 35.325 385 208 10 11 357 102 483 3.03e-72 233
Msa1025790 MtrunA17_Chr8g0350881 37.879 396 212 7 3 366 96 489 2.59e-71 231
Msa1025790 MtrunA17_Chr4g0066171 35.714 406 198 11 4 366 100 485 4.00e-71 230
Msa1025790 MtrunA17_Chr5g0419771 37.500 392 199 10 11 361 130 516 5.53e-71 231
Msa1025790 MtrunA17_Chr7g0231631 49.603 252 110 3 121 372 40 274 1.05e-70 222
Msa1025790 MtrunA17_Chr4g0014061 33.831 402 213 7 3 366 95 481 2.39e-69 225
Msa1025790 MtrunA17_Chr8g0374931 36.765 408 196 10 4 364 96 488 2.74e-69 225
Msa1025790 MtrunA17_Chr6g0463861 35.484 403 199 10 4 361 91 477 4.68e-69 224
Msa1025790 MtrunA17_Chr4g0066281 36.070 402 197 9 4 366 95 475 1.70e-68 223
Msa1025790 MtrunA17_Chr7g0275681 34.439 392 199 7 9 357 104 480 4.40e-68 222
Msa1025790 MtrunA17_Chr4g0011051 33.249 394 222 8 11 365 104 495 6.83e-68 222
Msa1025790 MtrunA17_Chr6g0463851 35.411 401 200 10 4 358 96 483 9.38e-68 221
Msa1025790 MtrunA17_Chr5g0419761 36.548 394 205 10 11 362 103 493 1.35e-67 221
Msa1025790 MtrunA17_Chr1g0179901 34.010 394 217 9 11 364 110 500 1.43e-67 221
Msa1025790 MtrunA17_Chr8g0374941 36.881 404 201 8 3 364 1033 1424 8.23e-67 229
Msa1025790 MtrunA17_Chr8g0374941 35.509 383 193 8 3 343 95 465 3.37e-61 213
Msa1025790 MtrunA17_Chr8g0374941 36.243 378 189 8 3 339 560 926 3.65e-58 204
Msa1025790 MtrunA17_Chr5g0410941 35.222 406 205 10 4 364 104 496 1.51e-66 218
Msa1025790 MtrunA17_Chr7g0265141 35.417 384 208 8 11 356 103 484 2.48e-66 218
Msa1025790 MtrunA17_Chr7g0218311 38.404 401 200 11 4 366 101 492 9.17e-66 216
Msa1025790 MtrunA17_Chr2g0294931 35.784 408 204 10 4 366 96 490 1.10e-64 213
Msa1025790 MtrunA17_Chr2g0294921 36.500 400 208 11 4 364 245 637 1.41e-64 216
Msa1025790 MtrunA17_Chr7g0265111 34.663 401 208 9 12 367 134 525 7.11e-64 213
Msa1025790 MtrunA17_Chr7g0265041 35.385 390 204 11 9 357 106 488 1.18e-63 211
Msa1025790 MtrunA17_Chr5g0428081 35.821 402 196 11 11 364 99 486 6.45e-63 209
Msa1025790 MtrunA17_Chr7g0265051 33.498 406 214 14 12 370 105 501 6.65e-61 204
Msa1025790 MtrunA17_Chr7g0265101 31.863 408 208 10 11 366 104 493 3.70e-60 202
Msa1025790 MtrunA17_Chr2g0294941 35.714 364 174 11 25 342 15 364 2.56e-59 196
Msa1025790 MtrunA17_Chr4g0044481 38.078 281 148 6 24 289 134 403 3.97e-56 189
Msa1025790 MtrunA17_Chr4g0066141 33.333 366 173 7 4 366 63 360 1.93e-52 178
Msa1025790 MtrunA17_Chr7g0243921 69.748 119 31 1 1 119 124 237 1.86e-51 171
Msa1025790 MtrunA17_Chr5g0440421 29.427 384 205 10 25 360 128 493 6.86e-48 169
Msa1025790 MtrunA17_Chr7g0243731 93.750 80 5 0 213 292 1 80 8.24e-48 157
Msa1025790 MtrunA17_Chr2g0329111 28.608 395 219 12 24 371 113 491 6.24e-46 164
Msa1025790 MtrunA17_Chr7g0232391 40.889 225 107 5 141 353 251 461 3.30e-45 161
Msa1025790 MtrunA17_Chr7g0232411 40.260 231 114 5 141 360 251 468 5.19e-45 161
Msa1025790 MtrunA17_Chr6g0449931 42.489 233 107 5 142 360 251 470 9.99e-45 160
Msa1025790 MtrunA17_Chr7g0275511 40.529 227 109 5 140 353 258 471 1.25e-43 157
Msa1025790 MtrunA17_Chr6g0459311 41.860 215 102 4 150 353 265 467 1.00e-42 155
Msa1025790 MtrunA17_Chr8g0361411 31.016 374 208 7 23 361 99 457 1.94e-42 154
Msa1025790 MtrunA17_Chr7g0243721 57.143 140 27 1 92 198 1 140 3.36e-42 144
Msa1025790 MtrunA17_Chr7g0249931 26.975 367 210 8 26 357 140 483 3.75e-42 153
Msa1025790 MtrunA17_Chr6g0486251 41.395 215 103 4 150 353 258 460 5.76e-42 152
Msa1025790 MtrunA17_Chr6g0486201 41.395 215 103 4 150 353 258 460 5.76e-42 152
Msa1025790 MtrunA17_Chr6g0462551 41.706 211 105 5 149 355 266 462 8.32e-42 152
Msa1025790 MtrunA17_Chr6g0464841 28.457 376 195 12 25 357 110 454 1.10e-41 152
Msa1025790 MtrunA17_Chr6g0464861 27.660 376 198 12 25 357 109 453 4.11e-41 150
Msa1025790 MtrunA17_Chr8g0336691 41.176 221 104 5 146 353 1168 1375 7.91e-41 154
Msa1025790 MtrunA17_Chr8g0336691 39.301 229 113 5 146 361 262 477 7.81e-39 147
Msa1025790 MtrunA17_Chr8g0336691 33.138 341 176 11 22 361 627 916 1.05e-36 141
Msa1025790 MtrunA17_Chr7g0250001 28.571 378 190 12 26 357 104 447 9.50e-41 149
Msa1025790 MtrunA17_Chr7g0232331 38.793 232 117 6 141 360 251 469 1.14e-40 149
Msa1025790 MtrunA17_Chr3g0121991 35.000 240 141 3 127 362 322 550 1.55e-40 150
Msa1025790 MtrunA17_Chr8g0339451 40.183 219 103 5 150 353 254 459 1.83e-40 149
Msa1025790 MtrunA17_Chr8g0377921 39.130 230 125 5 126 355 247 461 2.85e-40 148
Msa1025790 MtrunA17_Chr8g0373301 41.364 220 106 5 150 359 262 468 3.30e-40 148
Msa1025790 MtrunA17_Chr8g0335161 40.930 215 104 4 150 353 260 462 3.47e-40 148
Msa1025790 MtrunA17_Chr8g0361371 38.222 225 112 4 146 354 254 467 4.51e-40 147
Msa1025790 MtrunA17_Chr8g0347281 29.925 401 206 12 1 353 95 468 6.03e-40 147
Msa1025790 MtrunA17_Chr1g0153461 39.207 227 113 5 146 360 2 215 6.71e-40 140
Msa1025790 MtrunA17_Chr7g0232341 37.021 235 121 6 141 362 251 471 6.99e-40 147
Msa1025790 MtrunA17_Chr7g0232311 37.500 224 114 4 144 354 250 460 7.05e-40 147
Msa1025790 MtrunA17_Chr7g0249981 28.763 372 197 11 26 357 123 466 7.12e-40 147
Msa1025790 MtrunA17_Chr8g0336651 42.009 219 99 5 150 353 1034 1239 7.68e-40 150
Msa1025790 MtrunA17_Chr8g0336651 34.191 272 130 5 90 361 556 778 2.22e-37 143
Msa1025790 MtrunA17_Chr8g0336651 40.183 219 107 5 146 353 255 460 1.79e-36 140
Msa1025790 MtrunA17_Chr6g0462521 42.396 217 104 6 144 353 247 449 9.95e-40 146
Msa1025790 MtrunA17_Chr8g0382021 39.437 213 112 4 150 354 282 485 1.02e-39 147
Msa1025790 MtrunA17_Chr3g0122001 35.865 237 137 3 125 357 727 952 1.23e-39 150
Msa1025790 MtrunA17_Chr3g0122001 33.871 248 150 3 125 368 247 484 1.02e-37 144
Msa1025790 MtrunA17_Chr1g0153451 37.262 263 121 8 103 353 229 459 1.36e-39 146
Msa1025790 MtrunA17_Chr6g0454291 26.969 419 221 12 3 357 79 476 2.17e-39 146
Msa1025790 MtrunA17_Chr7g0232401 39.474 228 113 4 144 359 255 469 2.66e-39 145
Msa1025790 MtrunA17_Chr8g0335141 40.090 222 110 4 150 360 262 471 2.93e-39 145
Msa1025790 MtrunA17_Chr5g0414331 31.063 367 194 13 27 357 110 453 5.59e-39 144
Msa1025790 MtrunA17_Chr5g0414321 30.933 375 194 14 27 362 108 456 6.25e-39 144
Msa1025790 MtrunA17_Chr3g0079731 34.426 244 124 5 125 354 256 477 8.19e-39 144
Msa1025790 MtrunA17_Chr1g0159551 38.158 228 112 6 128 346 241 448 8.44e-39 144
Msa1025790 MtrunA17_Chr2g0307961 40.670 209 103 6 150 357 280 468 9.11e-39 144
Msa1025790 MtrunA17_Chr8g0334851 39.111 225 112 5 150 362 263 474 2.09e-38 143
Msa1025790 MtrunA17_Chr8g0347271 40.092 217 104 6 150 353 266 469 2.40e-38 143
Msa1025790 MtrunA17_Chr8g0339601 40.000 210 98 5 150 344 121 317 2.82e-38 140
Msa1025790 MtrunA17_Chr6g0462531 41.509 212 103 6 149 353 266 463 2.92e-38 142
Msa1025790 MtrunA17_Chr8g0357361 50.714 140 65 2 150 289 120 255 2.95e-38 138
Msa1025790 MtrunA17_Chr1g0173121 40.291 206 101 5 150 346 259 451 3.22e-38 142
Msa1025790 MtrunA17_Chr6g0464871 27.688 372 203 11 25 357 122 466 4.42e-38 142
Msa1025790 MtrunA17_Chr8g0377941 30.256 390 203 12 11 357 98 461 4.81e-38 142
Msa1025790 MtrunA17_Chr7g0249961 37.069 232 123 6 126 357 51 259 5.71e-38 137
Msa1025790 MtrunA17_Chr6g0462541 39.234 209 111 4 150 355 266 461 7.64e-38 142
Msa1025790 MtrunA17_Chr6g0464881 38.028 213 113 4 150 362 266 459 7.84e-38 141
Msa1025790 MtrunA17_Chr8g0370941 37.815 238 112 5 140 350 253 481 1.83e-37 141
Msa1025790 MtrunA17_Chr8g0339631 38.667 225 111 5 150 361 262 472 2.22e-37 140
Msa1025790 MtrunA17_Chr8g0339441 39.450 218 104 4 150 352 220 424 2.41e-37 139
Msa1025790 MtrunA17_Chr6g0454261 27.807 374 209 7 27 357 124 479 2.46e-37 140
Msa1025790 MtrunA17_Chr6g0454151 25.936 374 214 7 27 357 124 477 4.07e-37 140
Msa1025790 MtrunA17_Chr8g0336731 39.352 216 107 5 150 354 285 487 1.04e-36 139
Msa1025790 MtrunA17_Chr8g0339461 39.151 212 101 5 150 346 262 460 1.22e-36 138
Msa1025790 MtrunA17_Chr8g0336741 40.000 215 105 5 150 353 266 467 1.24e-36 138
Msa1025790 MtrunA17_Chr8g0334831 37.179 234 111 5 146 354 253 475 1.51e-36 138
Msa1025790 MtrunA17_Chr7g0217881 29.508 366 195 12 27 357 124 461 1.59e-36 138
Msa1025790 MtrunA17_Chr5g0403641 36.364 220 114 5 149 353 290 498 2.54e-36 138
Msa1025790 MtrunA17_Chr6g0454201 26.738 374 213 7 27 357 125 480 3.38e-36 137
Msa1025790 MtrunA17_Chr6g0462571 40.476 210 109 5 149 355 263 459 3.97e-36 137
Msa1025790 MtrunA17_Chr6g0454191 25.936 374 216 8 27 357 125 480 4.95e-36 137
Msa1025790 MtrunA17_Chr6g0454341 26.440 382 205 9 27 357 121 477 5.70e-36 136
Msa1025790 MtrunA17_Chr2g0278711 27.979 386 205 10 27 361 117 480 1.03e-35 136
Msa1025790 MtrunA17_Chr6g0454401 27.614 373 209 9 28 357 126 480 1.09e-35 135
Msa1025790 MtrunA17_Chr6g0454271 35.185 216 121 5 150 365 97 293 1.19e-35 132
Msa1025790 MtrunA17_Chr6g0454361 27.540 374 210 9 27 357 125 480 1.81e-35 135
Msa1025790 MtrunA17_Chr3g0098111 35.514 214 120 5 150 359 272 471 2.59e-35 135
Msa1025790 MtrunA17_Chr3g0078841 26.400 375 214 8 27 357 121 477 6.29e-35 134
Msa1025790 MtrunA17_Chr6g0464921 37.019 208 113 4 150 357 266 455 6.73e-35 133
Msa1025790 MtrunA17_Chr6g0454221 35.749 207 115 4 150 356 41 229 8.98e-35 129
Msa1025790 MtrunA17_Chr5g0448521 28.108 370 213 11 29 355 106 465 2.86e-34 132
Msa1025790 MtrunA17_Chr3g0112771 38.117 223 110 5 149 365 259 459 3.59e-34 131
Msa1025790 MtrunA17_Chr8g0380531 28.342 374 200 10 26 358 112 458 4.06e-34 131
Msa1025790 MtrunA17_Chr8g0369341 29.024 379 203 14 25 360 116 471 4.51e-34 131
Msa1025790 MtrunA17_Chr3g0118721 36.744 215 117 5 144 357 93 289 5.78e-34 127
Msa1025790 MtrunA17_Chr3g0079711 37.245 196 97 4 173 354 2 185 8.51e-34 124
Msa1025790 MtrunA17_Chr6g0453951 25.401 374 218 9 27 357 171 526 9.36e-34 131
Msa1025790 MtrunA17_Chr7g0218821 36.150 213 116 4 143 355 256 448 9.84e-34 130
Msa1025790 MtrunA17_Chr5g0442561 33.945 218 124 4 150 355 261 470 1.20e-33 130
Msa1025790 MtrunA17_Chr7g0218831 35.922 206 112 5 149 354 251 436 1.62e-33 129
Msa1025790 MtrunA17_Chr1g0207981 27.419 372 205 12 27 357 125 472 1.88e-33 129
Msa1025790 MtrunA17_Chr1g0207971 27.027 370 217 12 27 363 110 459 1.88e-33 129
Msa1025790 MtrunA17_Chr8g0334861 36.607 224 116 6 144 354 250 460 2.47e-33 129
Msa1025790 MtrunA17_Chr4g0050341 36.190 210 117 3 149 358 299 491 2.73e-33 129
Msa1025790 MtrunA17_Chr6g0454301 34.419 215 123 3 143 357 534 730 4.61e-33 130
Msa1025790 MtrunA17_Chr6g0454301 30.522 249 145 6 113 356 3 228 2.30e-28 116
Msa1025790 MtrunA17_Chr6g0454141 25.266 376 216 8 27 357 124 479 4.91e-33 128
Msa1025790 MtrunA17_Chr6g0454331 34.562 217 123 5 149 365 288 485 5.21e-33 128
Msa1025790 MtrunA17_Chr5g0412101 36.667 210 113 4 150 359 283 472 6.27e-33 128
Msa1025790 MtrunA17_Chr5g0412131 36.493 211 114 4 149 359 281 471 7.19e-33 128
Msa1025790 MtrunA17_Chr8g0355011 27.350 351 213 9 27 365 48 368 8.27e-33 126
Msa1025790 MtrunA17_Chr3g0118671 27.851 377 208 10 27 357 115 473 9.12e-33 127
Msa1025790 MtrunA17_Chr7g0218841 35.922 206 112 5 149 354 252 437 9.23e-33 127
Msa1025790 MtrunA17_Chr8g0336331 25.867 375 216 7 27 357 120 476 9.61e-33 127
Msa1025790 MtrunA17_Chr6g0454211 25.352 426 234 11 3 365 369 773 1.80e-32 129
Msa1025790 MtrunA17_Chr6g0454321 25.676 370 213 9 27 352 121 472 1.86e-32 128
Msa1025790 MtrunA17_Chr1g0207951 36.190 210 112 5 150 357 919 1108 2.49e-32 129
Msa1025790 MtrunA17_Chr1g0207951 32.536 209 120 4 150 358 384 571 7.66e-29 118
Msa1025790 MtrunA17_Chr4g0053321 33.478 230 136 4 150 373 281 499 2.71e-32 127
Msa1025790 MtrunA17_Chr5g0412111 36.493 211 112 4 150 359 274 463 2.72e-32 126
Msa1025790 MtrunA17_Chr8g0365811 36.123 227 120 8 150 366 756 967 2.90e-32 128
Msa1025790 MtrunA17_Chr8g0365811 33.333 183 96 4 150 321 274 441 2.59e-25 107
Msa1025790 MtrunA17_Chr7g0218811 34.783 207 115 4 149 355 261 447 3.14e-32 125
Msa1025790 MtrunA17_Chr3g0118691 32.950 261 149 7 99 357 246 482 4.16e-32 126
Msa1025790 MtrunA17_Chr5g0420801 27.151 372 212 12 25 360 113 461 4.71e-32 125
Msa1025790 MtrunA17_Chr5g0426431 29.688 384 189 13 27 357 122 477 7.13e-32 125
Msa1025790 MtrunA17_Chr5g0442581 35.780 218 120 5 150 355 265 474 8.53e-32 125
Msa1025790 MtrunA17_Chr3g0118711 35.814 215 119 5 144 357 284 480 1.11e-31 125
Msa1025790 MtrunA17_Chr3g0112761 37.156 218 110 5 149 360 256 452 1.15e-31 124
Msa1025790 MtrunA17_Chr5g0423981 33.173 208 121 3 150 357 255 444 1.41e-31 124
Msa1025790 MtrunA17_Chr6g0452771 34.615 208 118 4 150 357 290 479 1.94e-31 124
Msa1025790 MtrunA17_Chr6g0454131 33.654 208 120 4 150 357 289 478 2.34e-31 124
Msa1025790 MtrunA17_Chr2g0302961 27.297 381 191 13 28 357 120 465 2.58e-31 123
Msa1025790 MtrunA17_Chr5g0442601 37.037 216 120 6 150 355 664 873 2.64e-31 125
Msa1025790 MtrunA17_Chr5g0442601 30.634 284 156 9 27 283 64 333 9.13e-25 106
Msa1025790 MtrunA17_Chr4g0053501 25.964 389 223 10 12 357 98 464 3.21e-31 124
Msa1025790 MtrunA17_Chr5g0442521 34.259 216 127 4 150 355 263 473 4.27e-31 123
Msa1025790 MtrunA17_Chr5g0409591 33.482 224 122 6 144 352 271 482 5.17e-31 123
Msa1025790 MtrunA17_Chr6g0454351 26.039 361 215 10 27 357 126 464 5.27e-31 122
Msa1025790 MtrunA17_Chr5g0431421 37.674 215 115 6 146 359 254 450 7.47e-31 122
Msa1025790 MtrunA17_Chr1g0207931 28.274 336 198 8 27 358 202 498 7.58e-31 122
Msa1025790 MtrunA17_Chr6g0454181 25.729 377 213 11 27 357 124 479 9.42e-31 122
Msa1025790 MtrunA17_Chr3g0118771 34.884 215 121 5 144 357 292 488 1.13e-30 122
Msa1025790 MtrunA17_Chr5g0442491 35.160 219 122 5 149 355 262 472 1.44e-30 121
Msa1025790 MtrunA17_Chr5g0431441 33.577 274 134 9 86 350 224 458 1.58e-30 121
Msa1025790 MtrunA17_Chr3g0118701 34.884 215 121 5 144 357 286 482 1.72e-30 121
Msa1025790 MtrunA17_Chr8g0359821 32.735 223 131 5 143 365 281 484 1.84e-30 121
Msa1025790 MtrunA17_Chr1g0161351 25.250 400 218 13 11 361 134 501 2.61e-30 121
Msa1025790 MtrunA17_Chr5g0442541 33.945 218 124 5 150 355 254 463 2.72e-30 120
Msa1025790 MtrunA17_Chr5g0431361 36.744 215 117 5 146 359 259 455 3.02e-30 120
Msa1025790 MtrunA17_Chr6g0454121 33.654 208 120 4 150 357 289 478 3.26e-30 120
Msa1025790 MtrunA17_Chr6g0453961 32.692 208 122 3 150 357 300 489 4.14e-30 120
Msa1025790 MtrunA17_Chr4g0072761 37.500 208 106 7 150 354 266 452 5.51e-30 119
Msa1025790 MtrunA17_Chr5g0442511 33.790 219 129 6 150 358 282 494 7.42e-30 120
Msa1025790 MtrunA17_Chr5g0426401 37.306 193 102 5 144 336 115 288 7.59e-30 117
Msa1025790 MtrunA17_Chr7g0241781 27.988 343 196 8 12 334 99 410 8.66e-30 119
Msa1025790 MtrunA17_Chr5g0431371 35.484 248 125 8 113 359 237 450 1.50e-29 118
Msa1025790 MtrunA17_Chr2g0302991 36.406 217 116 6 150 357 259 462 1.73e-29 118
Msa1025790 MtrunA17_Chr5g0401721 30.242 248 158 5 111 357 237 470 2.44e-29 118
Msa1025790 MtrunA17_Chr5g0431401 35.814 215 119 6 146 359 254 450 5.87e-29 117
Msa1025790 MtrunA17_Chr5g0393591 25.278 360 194 9 27 358 124 436 6.01e-29 117
Msa1025790 MtrunA17_Chr1g0207861 32.710 214 126 5 150 359 271 470 8.49e-29 116
Msa1025790 MtrunA17_Chr3g0092641 27.177 379 205 12 27 357 122 477 2.65e-28 115
Msa1025790 MtrunA17_Chr5g0432731 32.353 238 129 7 127 360 90 299 1.11e-27 110
Msa1025790 MtrunA17_Chr1g0207831 31.132 212 123 5 150 358 273 464 1.46e-27 113
Msa1025790 MtrunA17_Chr4g0042931 35.545 211 116 5 150 354 264 460 2.11e-27 112
Msa1025790 MtrunA17_Chr5g0429681 34.450 209 121 4 150 355 302 497 2.17e-27 112
Msa1025790 MtrunA17_Chr3g0106231 34.434 212 114 7 142 350 255 444 2.25e-27 112
Msa1025790 MtrunA17_Chr7g0241801 27.114 343 199 9 12 334 99 410 2.27e-27 112
Msa1025790 MtrunA17_Chr3g0106251 33.962 212 115 7 142 350 97 286 2.75e-27 110
Msa1025790 MtrunA17_Chr4g0072771 34.762 210 116 5 150 359 279 467 8.84e-27 110
Msa1025790 MtrunA17_Chr7g0218791 32.673 202 116 4 150 351 260 441 1.23e-26 110
Msa1025790 MtrunA17_Chr4g0042891 34.667 225 125 7 143 359 257 467 1.54e-26 110
Msa1025790 MtrunA17_Chr4g0032331 37.433 187 97 7 149 332 257 426 2.39e-26 109
Msa1025790 MtrunA17_Chr6g0454171 32.432 185 107 3 173 357 143 309 2.87e-26 107
Msa1025790 MtrunA17_Chr7g0232351 44.697 132 60 3 140 260 249 378 3.61e-26 108
Msa1025790 MtrunA17_Chr5g0429711 33.971 209 121 6 150 357 269 461 3.72e-26 108
Msa1025790 MtrunA17_Chr6g0454371 32.065 184 107 4 174 357 5 170 9.26e-26 102
Msa1025790 MtrunA17_Chr5g0448551 28.296 311 174 11 11 285 96 393 1.42e-25 107
Msa1025790 MtrunA17_Chr4g0069611 33.152 184 108 5 150 333 269 437 6.90e-25 105
Msa1025790 MtrunA17_Chr2g0278721 26.575 365 198 11 12 333 105 442 1.79e-24 105
Msa1025790 MtrunA17_Chr2g0278721 25.068 367 207 14 12 333 610 953 9.40e-21 94.4
Msa1025790 MtrunA17_Chr2g0278741 26.301 365 199 10 12 333 187 524 2.68e-24 104
Msa1025790 MtrunA17_Chr8g0337381 40.714 140 70 3 221 360 2 128 4.92e-24 96.3
Msa1025790 MtrunA17_Chr3g0118661 32.857 210 117 6 150 356 290 478 7.05e-24 102
Msa1025790 MtrunA17_Chr7g0231651 47.525 101 52 1 3 102 100 200 8.95e-24 97.8
Msa1025790 MtrunA17_Chr4g0029131 26.016 369 212 12 1 328 85 433 1.71e-23 102
Msa1025790 MtrunA17_Chr1g0196851 25.758 396 240 9 1 360 121 498 1.87e-23 101
Msa1025790 MtrunA17_Chr3g0092031 30.978 184 112 5 150 333 6 174 1.12e-22 94.7
Msa1025790 MtrunA17_Chr5g0427571 33.333 183 107 5 150 331 105 273 2.25e-22 96.3
Msa1025790 MtrunA17_Chr8g0336251 32.673 202 117 6 135 331 252 439 2.50e-22 98.2
Msa1025790 MtrunA17_Chr8g0336321 32.673 202 117 6 135 331 252 439 2.59e-22 98.2
Msa1025790 MtrunA17_Chr6g0482061 35.176 199 112 7 150 344 281 466 1.81e-21 95.5
Msa1025790 MtrunA17_Chr4g0029151 24.474 380 204 11 1 328 93 441 3.29e-21 94.7
Msa1025790 MtrunA17_Chr6g0466831 32.323 198 116 6 139 333 258 440 5.22e-21 94.4
Msa1025790 MtrunA17_Chr3g0118751 30.841 214 102 5 144 357 277 444 8.86e-21 93.6
Msa1025790 MtrunA17_Chr6g0466841 31.818 198 117 6 139 333 258 440 9.25e-21 93.6
Msa1025790 MtrunA17_Chr6g0464091 30.435 207 123 5 127 333 262 447 1.20e-20 93.2
Msa1025790 MtrunA17_Chr8g0336261 33.333 150 83 2 174 323 5 137 1.60e-20 86.7
Msa1025790 MtrunA17_Chr8g0367221 32.979 188 109 6 150 334 1058 1231 1.94e-20 93.6
Msa1025790 MtrunA17_Chr8g0367221 36.025 161 93 5 147 302 265 420 7.31e-20 91.7
Msa1025790 MtrunA17_Chr8g0367221 30.189 212 129 7 150 359 1548 1742 1.49e-18 87.8
Msa1025790 MtrunA17_Chr2g0283041 24.538 379 235 11 16 363 100 458 6.88e-20 90.9
Msa1025790 MtrunA17_Chr2g0302851 32.432 185 108 6 150 333 270 438 8.65e-20 90.5
Msa1025790 MtrunA17_Chr6g0454251 23.913 322 177 9 3 261 79 395 1.70e-19 89.4
Msa1025790 MtrunA17_Chr4g0039881 31.522 184 109 6 150 332 246 413 4.07e-19 88.6
Msa1025790 MtrunA17_Chr1g0207881 33.094 139 80 3 222 358 258 385 1.55e-18 86.3
Msa1025790 MtrunA17_Chr6g0454231 36.496 137 71 3 222 357 97 218 2.71e-18 86.3
Msa1025790 MtrunA17_Chr4g0040691 29.630 189 119 4 146 332 257 433 2.74e-18 86.3
Msa1025790 MtrunA17_Chr4g0040711 29.255 188 119 4 147 332 258 433 5.84e-18 85.1
Msa1025790 MtrunA17_Chr5g0431431 29.500 200 106 5 113 312 179 343 3.22e-17 82.0
Msa1025790 MtrunA17_Chr2g0319801 32.632 190 114 5 146 332 255 433 5.18e-17 82.4
Msa1025790 MtrunA17_Chr2g0319731 32.812 192 115 6 144 332 270 450 7.27e-17 82.0
Msa1025790 MtrunA17_Chr2g0319791 29.688 192 121 5 144 332 253 433 1.21e-15 78.2
Msa1025790 MtrunA17_Chr2g0319761 24.706 340 199 10 13 316 98 416 2.38e-15 77.0
Msa1025790 MtrunA17_Chr7g0250021 25.333 225 118 6 26 212 112 324 3.14e-14 72.8
Msa1025790 MtrunA17_Chr4g0066231 45.000 80 39 2 259 336 1 77 6.32e-14 66.6
Msa1025790 MtrunA17_Chr2g0319751 29.534 193 117 5 144 328 730 911 1.27e-13 72.4
Msa1025790 MtrunA17_Chr2g0319751 23.370 368 202 13 1 332 86 409 2.94e-12 68.2
Msa1025790 MtrunA17_Chr2g0321331 30.270 185 97 6 151 332 87 242 1.08e-11 64.7
Msa1025790 MtrunA17_Chr7g0272701 34.066 91 58 1 11 99 30 120 1.09e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025790 AT4G34131.1 40.360 389 187 8 4 359 105 481 6.96e-87 271
Msa1025790 AT2G15490.3 40.838 382 184 9 12 361 110 481 1.49e-86 270
Msa1025790 AT2G15490.1 40.519 385 184 9 12 361 110 484 6.62e-86 268
Msa1025790 AT2G15480.2 39.589 389 189 10 12 361 113 494 1.74e-85 268
Msa1025790 AT2G15480.1 38.903 383 190 8 12 361 113 484 7.35e-85 266
Msa1025790 AT4G34135.1 40.838 382 182 8 11 359 113 483 1.05e-79 253
Msa1025790 AT4G34138.1 36.528 386 196 11 12 364 116 485 8.43e-74 237
Msa1025790 AT2G36770.1 35.294 391 213 6 11 364 108 495 1.57e-73 237
Msa1025790 AT2G36750.1 35.878 393 207 11 11 364 104 490 2.53e-72 234
Msa1025790 AT2G36800.1 35.204 392 213 8 7 360 102 490 4.21e-71 231
Msa1025790 AT2G36760.1 35.427 398 213 10 7 365 104 496 1.83e-70 229
Msa1025790 AT2G36780.1 33.671 395 222 8 7 364 104 495 3.53e-68 223
Msa1025790 AT2G36790.1 34.949 392 211 10 11 363 107 493 7.97e-66 217
Msa1025790 AT3G53150.1 34.026 385 202 7 21 357 129 509 5.83e-62 207
Msa1025790 AT3G53160.1 32.115 383 220 6 12 357 103 482 5.49e-59 199
Msa1025790 AT5G14860.1 32.061 393 214 15 1 357 100 475 6.98e-43 156
Msa1025790 AT1G05675.1 30.026 383 210 10 12 354 85 449 1.05e-41 152
Msa1025790 AT3G16520.3 38.863 211 108 6 149 354 262 456 5.37e-41 150
Msa1025790 AT2G31750.1 36.620 213 117 4 146 357 259 454 1.53e-40 149
Msa1025790 AT2G31750.2 36.620 213 117 4 146 357 259 454 2.98e-40 149
Msa1025790 AT1G73880.1 28.610 374 212 11 25 364 121 473 4.16e-40 148
Msa1025790 AT3G50740.1 40.175 229 108 7 149 360 260 476 5.19e-40 148
Msa1025790 AT2G43820.1 29.363 361 208 9 27 359 107 448 7.25e-40 147
Msa1025790 AT5G12890.1 35.169 236 129 5 129 356 261 480 2.10e-39 146
Msa1025790 AT1G01420.1 38.053 226 114 5 137 350 248 459 2.47e-39 146
Msa1025790 AT1G05680.1 29.504 383 212 10 12 354 85 449 2.75e-39 145
Msa1025790 AT1G01420.2 38.053 226 114 5 137 350 251 462 2.80e-39 146
Msa1025790 AT2G16890.2 29.471 397 217 14 1 357 94 467 4.53e-39 145
Msa1025790 AT1G10400.1 31.806 371 184 13 28 357 120 462 6.66e-39 145
Msa1025790 AT3G16520.2 39.196 199 100 6 149 342 262 444 1.46e-38 143
Msa1025790 AT3G16520.1 39.196 199 100 6 149 342 262 444 1.63e-38 143
Msa1025790 AT5G26310.1 38.596 228 108 5 149 358 255 468 4.37e-38 142
Msa1025790 AT4G01070.1 38.636 220 110 4 143 350 254 460 1.27e-37 141
Msa1025790 AT4G36770.1 31.667 360 187 12 24 343 105 445 2.03e-37 140
Msa1025790 AT1G22400.1 28.312 385 211 9 27 364 122 488 2.34e-37 141
Msa1025790 AT2G43840.2 28.889 360 209 9 27 358 107 447 4.06e-37 139
Msa1025790 AT5G05870.1 38.389 211 108 6 150 357 263 454 4.50e-37 139
Msa1025790 AT2G43840.1 28.889 360 209 9 27 358 107 447 4.83e-37 139
Msa1025790 AT1G22380.1 28.883 367 194 11 21 338 115 463 7.30e-37 139
Msa1025790 AT5G66690.1 37.719 228 110 7 149 358 255 468 2.49e-36 138
Msa1025790 AT4G15480.1 30.798 263 161 4 95 357 237 478 1.72e-35 135
Msa1025790 AT4G15490.1 26.344 372 211 10 27 357 117 466 1.16e-34 133
Msa1025790 AT1G06000.1 40.741 216 105 7 150 357 233 433 1.79e-34 132
Msa1025790 AT2G36970.1 32.042 284 157 9 91 373 237 485 2.55e-34 132
Msa1025790 AT2G31790.1 37.441 211 112 5 150 360 265 455 3.16e-34 132
Msa1025790 AT2G23250.1 28.032 371 201 11 26 357 92 435 4.82e-34 131
Msa1025790 AT1G07260.1 36.493 211 120 8 149 357 273 471 8.82e-34 130
Msa1025790 AT1G22360.1 27.154 383 214 10 22 357 113 477 9.84e-34 130
Msa1025790 AT4G15550.1 28.997 369 202 12 27 356 125 472 1.14e-33 130
Msa1025790 AT3G46660.1 35.681 213 117 5 150 360 264 458 2.48e-33 129
Msa1025790 AT2G18570.1 35.211 213 117 6 150 352 260 461 2.51e-33 129
Msa1025790 AT1G51210.1 28.824 340 180 12 25 333 125 433 3.24e-33 129
Msa1025790 AT2G16890.3 28.319 339 197 10 1 304 94 421 4.21e-33 128
Msa1025790 AT3G46680.1 36.538 208 112 5 150 355 258 447 5.96e-33 128
Msa1025790 AT1G78270.1 26.923 390 206 12 22 357 116 480 7.09e-33 128
Msa1025790 AT5G05860.1 36.453 203 109 5 150 350 256 440 7.53e-33 128
Msa1025790 AT5G59590.1 35.714 210 115 5 150 357 258 449 7.58e-33 128
Msa1025790 AT2G29740.1 31.977 344 177 15 54 357 148 474 8.14e-33 128
Msa1025790 AT5G03490.1 26.099 364 215 11 25 358 124 463 8.74e-33 128
Msa1025790 AT3G21760.1 27.224 371 220 9 28 357 119 480 9.32e-33 128
Msa1025790 AT2G18560.1 32.864 213 122 5 150 352 170 371 1.12e-32 126
Msa1025790 AT2G29730.1 33.778 225 132 5 139 361 257 466 1.17e-32 127
Msa1025790 AT4G34135.2 33.641 217 110 3 11 195 113 327 1.34e-32 125
Msa1025790 AT4G14090.1 35.681 213 120 5 146 356 257 454 1.67e-32 127
Msa1025790 AT2G23260.1 32.000 250 153 5 109 357 220 453 2.62e-32 126
Msa1025790 AT3G21790.1 28.075 374 213 11 28 357 117 478 3.21e-32 127
Msa1025790 AT3G11340.1 36.697 218 110 5 149 360 252 447 4.43e-32 125
Msa1025790 AT3G46670.1 34.742 213 119 5 150 360 257 451 5.93e-32 125
Msa1025790 AT1G07250.1 29.474 380 204 14 15 357 120 472 6.42e-32 125
Msa1025790 AT3G46700.1 35.377 212 117 5 150 359 253 446 8.92e-32 125
Msa1025790 AT3G21800.1 34.091 220 124 7 150 357 265 475 1.21e-31 125
Msa1025790 AT5G38010.1 34.450 209 120 4 149 357 262 453 1.55e-31 124
Msa1025790 AT1G22360.2 27.564 312 177 7 22 287 113 421 3.74e-31 123
Msa1025790 AT5G59580.1 34.272 213 120 5 150 360 256 450 4.82e-31 123
Msa1025790 AT4G15500.1 25.722 381 223 12 27 368 114 473 5.22e-31 123
Msa1025790 AT1G22340.1 27.720 386 209 13 22 357 116 481 1.05e-30 122
Msa1025790 AT5G05880.1 33.333 213 122 5 150 360 257 451 1.35e-30 122
Msa1025790 AT2G30140.1 27.297 381 212 10 12 354 95 448 2.44e-30 121
Msa1025790 AT2G29710.1 33.790 219 133 6 139 357 256 462 3.07e-30 120
Msa1025790 AT2G30150.1 27.987 318 178 10 46 360 170 439 4.27e-30 120
Msa1025790 AT2G30150.2 27.987 318 178 10 46 360 186 455 6.77e-30 120
Msa1025790 AT2G30140.2 28.158 380 209 13 12 354 95 447 8.74e-30 119
Msa1025790 AT1G01390.1 42.308 156 76 3 149 292 260 413 2.48e-29 118
Msa1025790 AT1G01390.2 35.714 210 110 4 149 346 277 473 2.62e-29 119
Msa1025790 AT5G38040.1 33.654 208 121 4 150 357 259 449 3.43e-29 117
Msa1025790 AT2G28080.1 25.000 364 225 8 26 359 128 473 3.50e-29 118
Msa1025790 AT1G24100.1 31.739 230 138 5 128 357 248 458 5.03e-29 117
Msa1025790 AT2G29750.1 36.019 211 120 6 149 357 276 473 6.74e-29 117
Msa1025790 AT1G07240.1 35.354 198 120 4 150 346 274 464 1.52e-28 116
Msa1025790 AT5G05900.1 34.466 206 112 4 150 355 263 445 1.75e-28 115
Msa1025790 AT3G46690.1 34.762 210 121 3 150 359 258 451 1.87e-28 115
Msa1025790 AT3G46650.1 34.483 203 113 5 150 350 241 425 4.13e-28 114
Msa1025790 AT3G21560.1 33.654 208 124 5 150 357 279 472 6.85e-28 114
Msa1025790 AT3G21750.1 33.913 230 126 5 143 357 250 468 8.03e-28 114
Msa1025790 AT4G15260.1 28.159 277 165 6 91 357 102 354 1.14e-27 112
Msa1025790 AT5G05890.1 33.333 213 122 6 150 360 261 455 3.18e-27 112
Msa1025790 AT5G17050.1 33.649 211 119 5 150 360 270 459 4.13e-27 112
Msa1025790 AT4G15280.1 26.503 366 224 11 29 357 116 473 4.25e-27 112
Msa1025790 AT3G46720.1 33.810 210 116 4 150 359 256 442 4.27e-27 112
Msa1025790 AT4G15280.2 26.503 366 224 11 29 357 148 505 5.98e-27 112
Msa1025790 AT2G26480.1 33.010 206 121 4 150 354 253 442 7.02e-27 111
Msa1025790 AT1G05560.1 36.111 216 115 6 150 357 251 451 9.64e-27 111
Msa1025790 AT1G05560.2 36.111 216 115 6 150 357 301 501 9.84e-27 111
Msa1025790 AT1G22370.2 26.623 308 182 7 21 287 115 419 1.02e-26 111
Msa1025790 AT1G22370.1 36.552 145 89 1 143 287 108 249 2.91e-26 107
Msa1025790 AT3G55710.1 34.404 218 121 5 149 363 262 460 3.77e-26 109
Msa1025790 AT1G05530.1 35.648 216 116 7 150 357 254 454 5.84e-26 108
Msa1025790 AT3G02100.1 25.269 372 205 11 27 359 124 461 7.01e-26 108
Msa1025790 AT1G30530.1 33.962 212 111 5 150 357 264 450 1.56e-25 107
Msa1025790 AT5G17030.1 31.731 208 121 6 150 357 269 455 2.60e-25 107
Msa1025790 AT5G17040.2 30.769 208 123 5 150 357 151 337 3.40e-25 105
Msa1025790 AT3G55700.1 33.178 214 123 5 149 360 258 453 3.58e-25 106
Msa1025790 AT5G17040.1 30.769 208 123 5 150 357 253 439 6.42e-25 105
Msa1025790 AT3G21780.1 30.837 227 135 7 143 357 252 468 5.35e-24 103
Msa1025790 AT5G65550.1 37.576 165 92 6 138 297 255 413 1.62e-23 102
Msa1025790 AT5G49690.1 24.205 409 202 14 11 364 99 454 4.62e-22 97.8
Msa1025790 AT3G29630.2 27.654 358 225 11 11 364 94 421 5.34e-22 97.1
Msa1025790 AT3G22250.1 37.410 139 82 2 150 287 276 410 1.17e-21 96.3
Msa1025790 AT3G29630.1 26.842 380 226 12 11 364 94 447 1.59e-20 93.2
Msa1025790 AT5G37950.1 38.938 113 67 2 149 261 234 344 1.00e-19 89.7
Msa1025790 AT5G37950.2 38.938 113 67 2 149 261 228 338 1.00e-19 89.7
Msa1025790 AT1G64910.1 31.677 161 106 3 144 303 238 395 2.71e-19 89.4
Msa1025790 AT4G27570.1 25.649 308 203 10 11 298 95 396 4.00e-18 85.9
Msa1025790 AT4G27560.1 25.649 308 203 10 11 298 95 396 4.14e-18 85.9
Msa1025790 AT5G53990.1 30.890 191 113 5 144 319 238 424 9.14e-18 84.7
Msa1025790 AT1G50580.1 27.303 304 193 11 11 295 94 388 1.74e-17 84.0
Msa1025790 AT2G22590.1 29.730 185 115 5 150 332 274 445 4.01e-17 83.2
Msa1025790 AT5G54010.1 31.481 162 107 3 144 304 244 402 3.80e-16 80.1
Msa1025790 AT5G54060.1 27.477 222 133 8 144 354 262 466 4.60e-15 76.6
Msa1025790 AT4G09500.2 30.247 162 109 3 144 304 238 396 3.73e-14 73.9
Msa1025790 AT4G09500.1 30.247 162 109 3 144 304 213 371 4.98e-14 73.6
Msa1025790 AT1G64920.1 27.434 226 136 9 144 360 238 444 6.73e-14 73.2
Msa1025790 AT2G22930.1 29.012 162 111 3 144 304 238 396 8.83e-14 72.8
Msa1025790 AT2G15490.2 29.070 86 61 0 12 97 110 195 3.17e-13 69.7
Msa1025790 AT2G15490.2 32.824 131 80 3 232 361 147 270 2.24e-12 67.0

Find 76 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCCTCTATAGTCTTCT+TGG 0.184608 7_1:+56723203 None:intergenic
ACAGACCCTCAATTTGATTT+TGG 0.190524 7_1:+56724273 None:intergenic
TGCCTTGAGTTAAGCCAATT+TGG 0.235659 7_1:+56723768 None:intergenic
TCCTCATTTCCTTGCTCTCT+TGG 0.260747 7_1:+56723253 None:intergenic
TATCTGGGTTGTAAGGAAAA+AGG 0.268127 7_1:-56723643 Msa1025790:CDS
GTAAAATCAGCCGTGAAATA+TGG 0.272331 7_1:-56724301 Msa1025790:CDS
AAGGATGAAAGAAAGCAAAA+AGG 0.281202 7_1:-56723577 Msa1025790:CDS
GGCACCACAACTTCTGATAT+TGG 0.291604 7_1:-56723535 Msa1025790:CDS
AGGGATATATCATATGGAAT+TGG 0.304490 7_1:-56723557 Msa1025790:CDS
CTCCTCAACAACTTCCTGAT+TGG 0.322625 7_1:-56724031 Msa1025790:CDS
TCCTTTCCTCAAAATCTTGT+AGG 0.345161 7_1:+56723595 None:intergenic
AACAACTTCCTGATTGGTTT+AGG 0.358838 7_1:-56724025 Msa1025790:CDS
TCTGTATTGTACGTAAGTTT+TGG 0.372238 7_1:-56723738 Msa1025790:CDS
GCACACGGTCTTGAAAATTC+AGG 0.378116 7_1:-56723675 Msa1025790:CDS
AAGAGGCAGAGTGGCCAAAT+TGG 0.384943 7_1:-56723782 Msa1025790:CDS
ATGACGAAAAGAAGGGCAAT+AGG 0.412955 7_1:-56723827 Msa1025790:CDS
GACATTGGCCATGCGATCAT+TGG 0.413868 7_1:+56723438 None:intergenic
TTCTTTGTCCTAAACCAATC+AGG 0.418230 7_1:+56724017 None:intergenic
GGGATATATCATATGGAATT+GGG 0.432262 7_1:-56723556 Msa1025790:CDS
TGACGAAAAGAAGGGCAATA+GGG 0.451944 7_1:-56723826 Msa1025790:CDS
GAGCAAAAGAAAACAAGTTA+TGG 0.454124 7_1:-56723353 Msa1025790:CDS
CATAAAATGAGCTGCACAGT+TGG 0.454470 7_1:+56724136 None:intergenic
GTGAAGACGTAGCGGTGAAA+AGG 0.463738 7_1:-56723317 Msa1025790:CDS
AATTCTTGAAAGCGTGAACT+CGG 0.465084 7_1:-56723466 Msa1025790:CDS
ATATTGGATCACCATGCAAC+AGG 0.467820 7_1:-56723519 Msa1025790:CDS
TAAAATTGCTCCTCAGACAT+TGG 0.475869 7_1:+56723423 None:intergenic
GGAACTTCACTTGAAATGTA+TGG 0.476781 7_1:-56724323 None:intergenic
CATGGAGGAGCTTGGAAAAG+AGG 0.490829 7_1:-56723799 Msa1025790:CDS
TGACTATACAATCAGGTTGA+AGG 0.511072 7_1:+56724243 None:intergenic
GATGCTCCAAAATCAAATTG+AGG 0.513595 7_1:-56724279 Msa1025790:CDS
ATGCTCCAAAATCAAATTGA+GGG 0.516580 7_1:-56724278 Msa1025790:CDS
GCCAAGAGAGCAAGGAAATG+AGG 0.517090 7_1:-56723254 Msa1025790:CDS
GTGTCGGACCAGTTTCATCA+TGG 0.525018 7_1:-56723860 Msa1025790:intron
GCAGCTGCTTGCACGGTCCA+CGG 0.526715 7_1:+56724206 None:intergenic
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_1:-56723234 Msa1025790:CDS
CGGTAACGAGGATGAAATAG+AGG 0.527651 7_1:-56723112 Msa1025790:CDS
TGAAGACGTAGCGGTGAAAA+GGG 0.534923 7_1:-56723316 Msa1025790:CDS
TAACAAGGATGACGAAAAGA+AGG 0.537233 7_1:-56723835 Msa1025790:CDS
GTGCAAGCAGCTGCAAAACT+AGG 0.538381 7_1:-56724197 Msa1025790:CDS
TTTGGAGCATCCATATTTCA+CGG 0.546690 7_1:+56724291 None:intergenic
GTAGAGATTCTGATGGGAAG+TGG 0.553457 7_1:-56723276 Msa1025790:CDS
ATTCTTGAAAGCGTGAACTC+GGG 0.560833 7_1:-56723465 Msa1025790:CDS
AGTTTCATCATGGGCTAACA+AGG 0.564404 7_1:-56723850 Msa1025790:CDS
CGGGTTTGCCAATGATCGCA+TGG 0.574803 7_1:-56723446 Msa1025790:CDS
AACCAATCAGGAAGTTGTTG+AGG 0.578889 7_1:+56724029 None:intergenic
ATATCAGTGACTATACAATC+AGG 0.585116 7_1:+56724236 None:intergenic
GGCCAAATTGGCTTAACTCA+AGG 0.588568 7_1:-56723770 Msa1025790:CDS
GGAGTCATCTCAATTGTATG+AGG 0.588744 7_1:+56724050 None:intergenic
GGGAAGTGGCCAAGAGAGCA+AGG 0.589137 7_1:-56723262 Msa1025790:CDS
GGATTGTGACTCACTGTGGA+TGG 0.592181 7_1:-56723494 Msa1025790:CDS
GACGAAAAGAAGGGCAATAG+GGG 0.595221 7_1:-56723825 Msa1025790:CDS
TTGAAGATAGGGGTTTCAGT+AGG 0.603859 7_1:-56723375 Msa1025790:CDS
GATCGCATGGCCAATGTCTG+AGG 0.605850 7_1:-56723433 Msa1025790:CDS
TGTCGGACCAGTTTCATCAT+GGG 0.607989 7_1:-56723859 Msa1025790:intron
TTGGATCACCATGCAACAGG+AGG 0.609377 7_1:-56723516 Msa1025790:CDS
GGGCAATAGGGGACACATGG+AGG 0.614512 7_1:-56723814 Msa1025790:CDS
ATCTAAAACACTCGGTAACG+AGG 0.621537 7_1:-56723124 Msa1025790:CDS
GAAGGCTGTAGAGATTCTGA+TGG 0.622073 7_1:-56723283 Msa1025790:CDS
TGCTGCCAAGAAGACTATAG+AGG 0.625798 7_1:-56723208 Msa1025790:CDS
GAAGGGCAATAGGGGACACA+TGG 0.628087 7_1:-56723817 Msa1025790:CDS
GCCAAGAAGACTATAGAGGA+AGG 0.629164 7_1:-56723204 Msa1025790:CDS
TCACAATCCCTCCTGTTGCA+TGG 0.631709 7_1:+56723508 None:intergenic
TCACTGATATGTTGTATCCG+TGG 0.636019 7_1:-56724223 Msa1025790:CDS
TCAATTGTATGAGGAAAACA+AGG 0.644557 7_1:+56724059 None:intergenic
TCAGAAACTAAATTATCATG+AGG 0.644747 7_1:+56724101 None:intergenic
AACAAGGATGACGAAAAGAA+GGG 0.649284 7_1:-56723834 Msa1025790:CDS
AAGAAGACTATAGAGGAAGG+TGG 0.651484 7_1:-56723201 Msa1025790:CDS
AGCTTGGAAAAGAGGCAGAG+TGG 0.652666 7_1:-56723791 Msa1025790:CDS
TGGATCACCATGCAACAGGA+GGG 0.653891 7_1:-56723515 Msa1025790:CDS
AAGGCTGTAGAGATTCTGAT+GGG 0.654605 7_1:-56723282 Msa1025790:CDS
TTGAAGAAATCTAAAACACT+CGG 0.657052 7_1:-56723132 Msa1025790:CDS
CACTAGTAGTGAAGACGTAG+CGG 0.661944 7_1:-56723325 Msa1025790:CDS
TGATCCAATATCAGAAGTTG+TGG 0.670015 7_1:+56723531 None:intergenic
CAGATTGTAGAAATTGCACA+CGG 0.701250 7_1:-56723690 Msa1025790:CDS
GAAAAGGGAAGAGATAGCGA+AGG 0.704162 7_1:-56723301 Msa1025790:CDS
GGAGGGATTGTGACTCACTG+TGG 0.743854 7_1:-56723498 Msa1025790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TCAGAAACTAAATTATCATG+AGG + chr7_1:56723317-56723336 None:intergenic 25.0%
!!! TAAGTTTTGGAAGTGTAAAT+AGG - chr7_1:56723690-56723709 Msa1025790:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG - chr7_1:56723756-56723775 Msa1025790:CDS 25.0%
!! TTCAGGTCATAATTTTATCT+GGG - chr7_1:56723757-56723776 Msa1025790:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG - chr7_1:56723765-56723784 Msa1025790:CDS 25.0%
!! TTGAAGAAATCTAAAACACT+CGG - chr7_1:56724283-56724302 Msa1025790:CDS 25.0%
! TCAGAAACTAAATTATCATG+AGG + chr7_1:56723317-56723336 None:intergenic 25.0%
!!! TAAGTTTTGGAAGTGTAAAT+AGG - chr7_1:56723690-56723709 Msa1025790:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG - chr7_1:56723756-56723775 Msa1025790:CDS 25.0%
!! TTCAGGTCATAATTTTATCT+GGG - chr7_1:56723757-56723776 Msa1025790:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG - chr7_1:56723765-56723784 Msa1025790:CDS 25.0%
!! TTGAAGAAATCTAAAACACT+CGG - chr7_1:56724283-56724302 Msa1025790:CDS 25.0%
ATGCTCCAAAATCAAATTGA+GGG - chr7_1:56723137-56723156 Msa1025790:CDS 30.0%
ATATCAGTGACTATACAATC+AGG + chr7_1:56723182-56723201 None:intergenic 30.0%
TCAATTGTATGAGGAAAACA+AGG + chr7_1:56723359-56723378 None:intergenic 30.0%
!! TTCAAACACTGGTTCAAAAA+AGG + chr7_1:56723435-56723454 None:intergenic 30.0%
GAATCTGAGAAAAGAAGTTA+TGG - chr7_1:56723452-56723471 Msa1025790:CDS 30.0%
! ATAGAATAGTTTTCATGACC+TGG - chr7_1:56723481-56723500 Msa1025790:CDS 30.0%
! GTTTTTCATAATCACTTTCC+AGG + chr7_1:56723502-56723521 None:intergenic 30.0%
! TCTGTATTGTACGTAAGTTT+TGG - chr7_1:56723677-56723696 Msa1025790:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG - chr7_1:56723838-56723857 Msa1025790:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG - chr7_1:56723839-56723858 Msa1025790:CDS 30.0%
GCAAAAAGGGATATATCATA+TGG - chr7_1:56723852-56723871 Msa1025790:intron 30.0%
AGGGATATATCATATGGAAT+TGG - chr7_1:56723858-56723877 Msa1025790:intron 30.0%
GGGATATATCATATGGAATT+GGG - chr7_1:56723859-56723878 Msa1025790:intron 30.0%
!!! TTGTCGATGTTTTGAAGATA+GGG - chr7_1:56724029-56724048 Msa1025790:CDS 30.0%
GAGCAAAAGAAAACAAGTTA+TGG - chr7_1:56724062-56724081 Msa1025790:CDS 30.0%
ATGCTCCAAAATCAAATTGA+GGG - chr7_1:56723137-56723156 Msa1025790:CDS 30.0%
ATATCAGTGACTATACAATC+AGG + chr7_1:56723182-56723201 None:intergenic 30.0%
TCAATTGTATGAGGAAAACA+AGG + chr7_1:56723359-56723378 None:intergenic 30.0%
!! TTCAAACACTGGTTCAAAAA+AGG + chr7_1:56723435-56723454 None:intergenic 30.0%
GAATCTGAGAAAAGAAGTTA+TGG - chr7_1:56723452-56723471 Msa1025790:CDS 30.0%
! ATAGAATAGTTTTCATGACC+TGG - chr7_1:56723481-56723500 Msa1025790:CDS 30.0%
! GTTTTTCATAATCACTTTCC+AGG + chr7_1:56723502-56723521 None:intergenic 30.0%
! TCTGTATTGTACGTAAGTTT+TGG - chr7_1:56723677-56723696 Msa1025790:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG - chr7_1:56723838-56723857 Msa1025790:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG - chr7_1:56723839-56723858 Msa1025790:CDS 30.0%
GCAAAAAGGGATATATCATA+TGG - chr7_1:56723852-56723871 Msa1025790:intron 30.0%
AGGGATATATCATATGGAAT+TGG - chr7_1:56723858-56723877 Msa1025790:intron 30.0%
GGGATATATCATATGGAATT+GGG - chr7_1:56723859-56723878 Msa1025790:intron 30.0%
!!! TTGTCGATGTTTTGAAGATA+GGG - chr7_1:56724029-56724048 Msa1025790:CDS 30.0%
GAGCAAAAGAAAACAAGTTA+TGG - chr7_1:56724062-56724081 Msa1025790:CDS 30.0%
GTAAAATCAGCCGTGAAATA+TGG - chr7_1:56723114-56723133 Msa1025790:CDS 35.0%
! TTTGGAGCATCCATATTTCA+CGG + chr7_1:56723127-56723146 None:intergenic 35.0%
GATGCTCCAAAATCAAATTG+AGG - chr7_1:56723136-56723155 Msa1025790:CDS 35.0%
!! ACAGACCCTCAATTTGATTT+TGG + chr7_1:56723145-56723164 None:intergenic 35.0%
!! TGACTATACAATCAGGTTGA+AGG + chr7_1:56723175-56723194 None:intergenic 35.0%
!! AACAACTTCCTGATTGGTTT+AGG - chr7_1:56723390-56723409 Msa1025790:CDS 35.0%
TTCTTTGTCCTAAACCAATC+AGG + chr7_1:56723401-56723420 None:intergenic 35.0%
! CTTTTCTCAGATTCAAACAC+TGG + chr7_1:56723446-56723465 None:intergenic 35.0%
AAAACTTAGTAACGCTACCT+TGG - chr7_1:56723517-56723536 Msa1025790:CDS 35.0%
AAACTTAGTAACGCTACCTT+GGG - chr7_1:56723518-56723537 Msa1025790:CDS 35.0%
TAACAAGGATGACGAAAAGA+AGG - chr7_1:56723580-56723599 Msa1025790:CDS 35.0%
AACAAGGATGACGAAAAGAA+GGG - chr7_1:56723581-56723600 Msa1025790:CDS 35.0%
CAGATTGTAGAAATTGCACA+CGG - chr7_1:56723725-56723744 Msa1025790:CDS 35.0%
TATCTGGGTTGTAAGGAAAA+AGG - chr7_1:56723772-56723791 Msa1025790:CDS 35.0%
! CAGTTTCCTACAAGATTTTG+AGG - chr7_1:56723814-56723833 Msa1025790:CDS 35.0%
!! TCCTACAAGATTTTGAGGAA+AGG - chr7_1:56723819-56723838 Msa1025790:CDS 35.0%
TCCTTTCCTCAAAATCTTGT+AGG + chr7_1:56723823-56723842 None:intergenic 35.0%
TGATCCAATATCAGAAGTTG+TGG + chr7_1:56723887-56723906 None:intergenic 35.0%
! AATTCTTGAAAGCGTGAACT+CGG - chr7_1:56723949-56723968 Msa1025790:intron 35.0%
TAAAATTGCTCCTCAGACAT+TGG + chr7_1:56723995-56724014 None:intergenic 35.0%
!!! CTTGTCGATGTTTTGAAGAT+AGG - chr7_1:56724028-56724047 Msa1025790:CDS 35.0%
!!! TGTCGATGTTTTGAAGATAG+GGG - chr7_1:56724030-56724049 Msa1025790:CDS 35.0%
GTAAAATCAGCCGTGAAATA+TGG - chr7_1:56723114-56723133 Msa1025790:CDS 35.0%
! TTTGGAGCATCCATATTTCA+CGG + chr7_1:56723127-56723146 None:intergenic 35.0%
GATGCTCCAAAATCAAATTG+AGG - chr7_1:56723136-56723155 Msa1025790:CDS 35.0%
!! ACAGACCCTCAATTTGATTT+TGG + chr7_1:56723145-56723164 None:intergenic 35.0%
!! TGACTATACAATCAGGTTGA+AGG + chr7_1:56723175-56723194 None:intergenic 35.0%
!! AACAACTTCCTGATTGGTTT+AGG - chr7_1:56723390-56723409 Msa1025790:CDS 35.0%
TTCTTTGTCCTAAACCAATC+AGG + chr7_1:56723401-56723420 None:intergenic 35.0%
! CTTTTCTCAGATTCAAACAC+TGG + chr7_1:56723446-56723465 None:intergenic 35.0%
AAAACTTAGTAACGCTACCT+TGG - chr7_1:56723517-56723536 Msa1025790:CDS 35.0%
AAACTTAGTAACGCTACCTT+GGG - chr7_1:56723518-56723537 Msa1025790:CDS 35.0%
TAACAAGGATGACGAAAAGA+AGG - chr7_1:56723580-56723599 Msa1025790:CDS 35.0%
AACAAGGATGACGAAAAGAA+GGG - chr7_1:56723581-56723600 Msa1025790:CDS 35.0%
CAGATTGTAGAAATTGCACA+CGG - chr7_1:56723725-56723744 Msa1025790:CDS 35.0%
TATCTGGGTTGTAAGGAAAA+AGG - chr7_1:56723772-56723791 Msa1025790:CDS 35.0%
! CAGTTTCCTACAAGATTTTG+AGG - chr7_1:56723814-56723833 Msa1025790:CDS 35.0%
!! TCCTACAAGATTTTGAGGAA+AGG - chr7_1:56723819-56723838 Msa1025790:CDS 35.0%
TCCTTTCCTCAAAATCTTGT+AGG + chr7_1:56723823-56723842 None:intergenic 35.0%
TGATCCAATATCAGAAGTTG+TGG + chr7_1:56723887-56723906 None:intergenic 35.0%
! AATTCTTGAAAGCGTGAACT+CGG - chr7_1:56723949-56723968 Msa1025790:intron 35.0%
TAAAATTGCTCCTCAGACAT+TGG + chr7_1:56723995-56724014 None:intergenic 35.0%
!!! CTTGTCGATGTTTTGAAGAT+AGG - chr7_1:56724028-56724047 Msa1025790:CDS 35.0%
!!! TGTCGATGTTTTGAAGATAG+GGG - chr7_1:56724030-56724049 Msa1025790:CDS 35.0%
TCACTGATATGTTGTATCCG+TGG - chr7_1:56723192-56723211 Msa1025790:CDS 40.0%
CATAAAATGAGCTGCACAGT+TGG + chr7_1:56723282-56723301 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG + chr7_1:56723368-56723387 None:intergenic 40.0%
AACCAATCAGGAAGTTGTTG+AGG + chr7_1:56723389-56723408 None:intergenic 40.0%
AACTTAGTAACGCTACCTTG+GGG - chr7_1:56723519-56723538 Msa1025790:CDS 40.0%
TTGTTAGCCCATGATGAAAC+TGG + chr7_1:56723566-56723585 None:intergenic 40.0%
! AGTTTCATCATGGGCTAACA+AGG - chr7_1:56723565-56723584 Msa1025790:CDS 40.0%
ATGACGAAAAGAAGGGCAAT+AGG - chr7_1:56723588-56723607 Msa1025790:CDS 40.0%
TGACGAAAAGAAGGGCAATA+GGG - chr7_1:56723589-56723608 Msa1025790:CDS 40.0%
TGCCTTGAGTTAAGCCAATT+TGG + chr7_1:56723650-56723669 None:intergenic 40.0%
ATATTGGATCACCATGCAAC+AGG - chr7_1:56723896-56723915 Msa1025790:intron 40.0%
! ATTCTTGAAAGCGTGAACTC+GGG - chr7_1:56723950-56723969 Msa1025790:intron 40.0%
TTGAAGATAGGGGTTTCAGT+AGG - chr7_1:56724040-56724059 Msa1025790:CDS 40.0%
AAGGCTGTAGAGATTCTGAT+GGG - chr7_1:56724133-56724152 Msa1025790:CDS 40.0%
AGGATGAGAGCAAAGAAACT+TGG - chr7_1:56724181-56724200 Msa1025790:CDS 40.0%
ACCTTCCTCTATAGTCTTCT+TGG + chr7_1:56724215-56724234 None:intergenic 40.0%
AAGAAGACTATAGAGGAAGG+TGG - chr7_1:56724214-56724233 Msa1025790:CDS 40.0%
! ATCTAAAACACTCGGTAACG+AGG - chr7_1:56724291-56724310 Msa1025790:CDS 40.0%
TCACTGATATGTTGTATCCG+TGG - chr7_1:56723192-56723211 Msa1025790:CDS 40.0%
CATAAAATGAGCTGCACAGT+TGG + chr7_1:56723282-56723301 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG + chr7_1:56723368-56723387 None:intergenic 40.0%
AACCAATCAGGAAGTTGTTG+AGG + chr7_1:56723389-56723408 None:intergenic 40.0%
AACTTAGTAACGCTACCTTG+GGG - chr7_1:56723519-56723538 Msa1025790:CDS 40.0%
TTGTTAGCCCATGATGAAAC+TGG + chr7_1:56723566-56723585 None:intergenic 40.0%
! AGTTTCATCATGGGCTAACA+AGG - chr7_1:56723565-56723584 Msa1025790:CDS 40.0%
ATGACGAAAAGAAGGGCAAT+AGG - chr7_1:56723588-56723607 Msa1025790:CDS 40.0%
TGACGAAAAGAAGGGCAATA+GGG - chr7_1:56723589-56723608 Msa1025790:CDS 40.0%
TGCCTTGAGTTAAGCCAATT+TGG + chr7_1:56723650-56723669 None:intergenic 40.0%
ATATTGGATCACCATGCAAC+AGG - chr7_1:56723896-56723915 Msa1025790:intron 40.0%
! ATTCTTGAAAGCGTGAACTC+GGG - chr7_1:56723950-56723969 Msa1025790:intron 40.0%
TTGAAGATAGGGGTTTCAGT+AGG - chr7_1:56724040-56724059 Msa1025790:CDS 40.0%
AAGGCTGTAGAGATTCTGAT+GGG - chr7_1:56724133-56724152 Msa1025790:CDS 40.0%
AGGATGAGAGCAAAGAAACT+TGG - chr7_1:56724181-56724200 Msa1025790:CDS 40.0%
ACCTTCCTCTATAGTCTTCT+TGG + chr7_1:56724215-56724234 None:intergenic 40.0%
AAGAAGACTATAGAGGAAGG+TGG - chr7_1:56724214-56724233 Msa1025790:CDS 40.0%
! ATCTAAAACACTCGGTAACG+AGG - chr7_1:56724291-56724310 Msa1025790:CDS 40.0%
!! TAGTTTTGCAGCTGCTTGCA+CGG + chr7_1:56723219-56723238 None:intergenic 45.0%
CTCCTCAACAACTTCCTGAT+TGG - chr7_1:56723384-56723403 Msa1025790:CDS 45.0%
!! CACTGGTTCAAAAAAGGCAG+CGG + chr7_1:56723429-56723448 None:intergenic 45.0%
CTACCTTGGGGATCAAATCT+TGG - chr7_1:56723531-56723550 Msa1025790:CDS 45.0%
ACTCCAAGATTTGATCCCCA+AGG + chr7_1:56723537-56723556 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+CGG - chr7_1:56723539-56723558 Msa1025790:CDS 45.0%
TGTCGGACCAGTTTCATCAT+GGG - chr7_1:56723556-56723575 Msa1025790:CDS 45.0%
GACGAAAAGAAGGGCAATAG+GGG - chr7_1:56723590-56723609 Msa1025790:CDS 45.0%
! GGCCAAATTGGCTTAACTCA+AGG - chr7_1:56723645-56723664 Msa1025790:CDS 45.0%
GCACACGGTCTTGAAAATTC+AGG - chr7_1:56723740-56723759 Msa1025790:CDS 45.0%
GGCACCACAACTTCTGATAT+TGG - chr7_1:56723880-56723899 Msa1025790:intron 45.0%
CACTAGTAGTGAAGACGTAG+CGG - chr7_1:56724090-56724109 Msa1025790:CDS 45.0%
TGAAGACGTAGCGGTGAAAA+GGG - chr7_1:56724099-56724118 Msa1025790:CDS 45.0%
GAAAAGGGAAGAGATAGCGA+AGG - chr7_1:56724114-56724133 Msa1025790:CDS 45.0%
GAAGGCTGTAGAGATTCTGA+TGG - chr7_1:56724132-56724151 Msa1025790:CDS 45.0%
GTAGAGATTCTGATGGGAAG+TGG - chr7_1:56724139-56724158 Msa1025790:CDS 45.0%
TCCTCATTTCCTTGCTCTCT+TGG + chr7_1:56724165-56724184 None:intergenic 45.0%
TGCTGCCAAGAAGACTATAG+AGG - chr7_1:56724207-56724226 Msa1025790:CDS 45.0%
GCCAAGAAGACTATAGAGGA+AGG - chr7_1:56724211-56724230 Msa1025790:CDS 45.0%
CGGTAACGAGGATGAAATAG+AGG - chr7_1:56724303-56724322 Msa1025790:CDS 45.0%
!! TAGTTTTGCAGCTGCTTGCA+CGG + chr7_1:56723219-56723238 None:intergenic 45.0%
CTCCTCAACAACTTCCTGAT+TGG - chr7_1:56723384-56723403 Msa1025790:CDS 45.0%
!! CACTGGTTCAAAAAAGGCAG+CGG + chr7_1:56723429-56723448 None:intergenic 45.0%
CTACCTTGGGGATCAAATCT+TGG - chr7_1:56723531-56723550 Msa1025790:CDS 45.0%
ACTCCAAGATTTGATCCCCA+AGG + chr7_1:56723537-56723556 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+CGG - chr7_1:56723539-56723558 Msa1025790:CDS 45.0%
TGTCGGACCAGTTTCATCAT+GGG - chr7_1:56723556-56723575 Msa1025790:CDS 45.0%
GACGAAAAGAAGGGCAATAG+GGG - chr7_1:56723590-56723609 Msa1025790:CDS 45.0%
! GGCCAAATTGGCTTAACTCA+AGG - chr7_1:56723645-56723664 Msa1025790:CDS 45.0%
GCACACGGTCTTGAAAATTC+AGG - chr7_1:56723740-56723759 Msa1025790:CDS 45.0%
GGCACCACAACTTCTGATAT+TGG - chr7_1:56723880-56723899 Msa1025790:intron 45.0%
CACTAGTAGTGAAGACGTAG+CGG - chr7_1:56724090-56724109 Msa1025790:CDS 45.0%
TGAAGACGTAGCGGTGAAAA+GGG - chr7_1:56724099-56724118 Msa1025790:CDS 45.0%
GAAAAGGGAAGAGATAGCGA+AGG - chr7_1:56724114-56724133 Msa1025790:CDS 45.0%
GAAGGCTGTAGAGATTCTGA+TGG - chr7_1:56724132-56724151 Msa1025790:CDS 45.0%
GTAGAGATTCTGATGGGAAG+TGG - chr7_1:56724139-56724158 Msa1025790:CDS 45.0%
TCCTCATTTCCTTGCTCTCT+TGG + chr7_1:56724165-56724184 None:intergenic 45.0%
TGCTGCCAAGAAGACTATAG+AGG - chr7_1:56724207-56724226 Msa1025790:CDS 45.0%
GCCAAGAAGACTATAGAGGA+AGG - chr7_1:56724211-56724230 Msa1025790:CDS 45.0%
CGGTAACGAGGATGAAATAG+AGG - chr7_1:56724303-56724322 Msa1025790:CDS 45.0%
GTGCAAGCAGCTGCAAAACT+AGG - chr7_1:56723218-56723237 Msa1025790:CDS 50.0%
GTGTCGGACCAGTTTCATCA+TGG - chr7_1:56723555-56723574 Msa1025790:CDS 50.0%
CATGGAGGAGCTTGGAAAAG+AGG - chr7_1:56723616-56723635 Msa1025790:CDS 50.0%
AGCTTGGAAAAGAGGCAGAG+TGG - chr7_1:56723624-56723643 Msa1025790:CDS 50.0%
AAGAGGCAGAGTGGCCAAAT+TGG - chr7_1:56723633-56723652 Msa1025790:CDS 50.0%
TTGGATCACCATGCAACAGG+AGG - chr7_1:56723899-56723918 Msa1025790:intron 50.0%
TGGATCACCATGCAACAGGA+GGG - chr7_1:56723900-56723919 Msa1025790:intron 50.0%
TCACAATCCCTCCTGTTGCA+TGG + chr7_1:56723910-56723929 None:intergenic 50.0%
GGATTGTGACTCACTGTGGA+TGG - chr7_1:56723921-56723940 Msa1025790:intron 50.0%
GACATTGGCCATGCGATCAT+TGG + chr7_1:56723980-56723999 None:intergenic 50.0%
GTGAAGACGTAGCGGTGAAA+AGG - chr7_1:56724098-56724117 Msa1025790:CDS 50.0%
GCCAAGAGAGCAAGGAAATG+AGG - chr7_1:56724161-56724180 Msa1025790:CDS 50.0%
GTGCAAGCAGCTGCAAAACT+AGG - chr7_1:56723218-56723237 Msa1025790:CDS 50.0%
GTGTCGGACCAGTTTCATCA+TGG - chr7_1:56723555-56723574 Msa1025790:CDS 50.0%
CATGGAGGAGCTTGGAAAAG+AGG - chr7_1:56723616-56723635 Msa1025790:CDS 50.0%
AGCTTGGAAAAGAGGCAGAG+TGG - chr7_1:56723624-56723643 Msa1025790:CDS 50.0%
AAGAGGCAGAGTGGCCAAAT+TGG - chr7_1:56723633-56723652 Msa1025790:CDS 50.0%
TTGGATCACCATGCAACAGG+AGG - chr7_1:56723899-56723918 Msa1025790:intron 50.0%
TGGATCACCATGCAACAGGA+GGG - chr7_1:56723900-56723919 Msa1025790:intron 50.0%
TCACAATCCCTCCTGTTGCA+TGG + chr7_1:56723910-56723929 None:intergenic 50.0%
GGATTGTGACTCACTGTGGA+TGG - chr7_1:56723921-56723940 Msa1025790:intron 50.0%
GACATTGGCCATGCGATCAT+TGG + chr7_1:56723980-56723999 None:intergenic 50.0%
GTGAAGACGTAGCGGTGAAA+AGG - chr7_1:56724098-56724117 Msa1025790:CDS 50.0%
GCCAAGAGAGCAAGGAAATG+AGG - chr7_1:56724161-56724180 Msa1025790:CDS 50.0%
GGTTCAAAAAAGGCAGCGGC+AGG + chr7_1:56723425-56723444 None:intergenic 55.0%
GAAGGGCAATAGGGGACACA+TGG - chr7_1:56723598-56723617 Msa1025790:CDS 55.0%
GGAGGGATTGTGACTCACTG+TGG - chr7_1:56723917-56723936 Msa1025790:intron 55.0%
CGGGTTTGCCAATGATCGCA+TGG - chr7_1:56723969-56723988 Msa1025790:intron 55.0%
GATCGCATGGCCAATGTCTG+AGG - chr7_1:56723982-56724001 Msa1025790:CDS 55.0%
GGTTCAAAAAAGGCAGCGGC+AGG + chr7_1:56723425-56723444 None:intergenic 55.0%
GAAGGGCAATAGGGGACACA+TGG - chr7_1:56723598-56723617 Msa1025790:CDS 55.0%
GGAGGGATTGTGACTCACTG+TGG - chr7_1:56723917-56723936 Msa1025790:intron 55.0%
CGGGTTTGCCAATGATCGCA+TGG - chr7_1:56723969-56723988 Msa1025790:intron 55.0%
GATCGCATGGCCAATGTCTG+AGG - chr7_1:56723982-56724001 Msa1025790:CDS 55.0%
GGGCAATAGGGGACACATGG+AGG - chr7_1:56723601-56723620 Msa1025790:CDS 60.0%
AGGGGACACATGGAGGAGCT+TGG - chr7_1:56723608-56723627 Msa1025790:CDS 60.0%
GGGAAGTGGCCAAGAGAGCA+AGG - chr7_1:56724153-56724172 Msa1025790:CDS 60.0%
GGGCAATAGGGGACACATGG+AGG - chr7_1:56723601-56723620 Msa1025790:CDS 60.0%
AGGGGACACATGGAGGAGCT+TGG - chr7_1:56723608-56723627 Msa1025790:CDS 60.0%
GGGAAGTGGCCAAGAGAGCA+AGG - chr7_1:56724153-56724172 Msa1025790:CDS 60.0%
GCAGCTGCTTGCACGGTCCA+CGG + chr7_1:56723212-56723231 None:intergenic 65.0%
GCAGCTGCTTGCACGGTCCA+CGG + chr7_1:56723212-56723231 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 56723107 56724330 56723107 ID=Msa1025790;Name=Msa1025790
chr7_1 mRNA 56723107 56724330 56723107 ID=Msa1025790-mRNA-1;Parent=Msa1025790;Name=Msa1025790-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|374
chr7_1 exon 56723970 56724330 56723970 ID=Msa1025790-mRNA-1:exon:11322;Parent=Msa1025790-mRNA-1
chr7_1 exon 56723107 56723870 56723107 ID=Msa1025790-mRNA-1:exon:11321;Parent=Msa1025790-mRNA-1
chr7_1 CDS 56723970 56724330 56723970 ID=Msa1025790-mRNA-1:cds;Parent=Msa1025790-mRNA-1
chr7_1 CDS 56723107 56723870 56723107 ID=Msa1025790-mRNA-1:cds;Parent=Msa1025790-mRNA-1
Gene Sequence

>Msa1025790

ATGTATGGTAAAATCAGCCGTGAAATATGGATGCTCCAAAATCAAATTGAGGGTCTGTTTCAAGACCTTCAACCTGATTGTATAGTCACTGATATGTTGTATCCGTGGACCGTGCAAGCAGCTGCAAAACTAGGTATTCAAAGAATTCATTATTACAGCTCAAGCTACTTCTCCAACTGTGCAGCTCATTTTATGATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACTATTCCTTGTTTTCCTCATACAATTGAGATGACTCCTCAACAACTTCCTGATTGGTTTAGGACAAAGAATCCTGCCGCTGCCTTTTTTGAACCAGTGTTTGAATCTGAGAAAAGAATTTCATCATGGGCTAACAAGGATGACGAAAAGAAGGGCAATAGGGGACACATGGAGGAGCTTGGAAAAGAGGCAGAGTGGCCAAATTGGCTTAACTCAAGGCAAAATGAGTCTGTATTGTACGTAAGTTTTGGAAGTGTAAATAGGCTTGATAATGCTCAGATTGTAGAAATTGCACACGGTCTTGAAAATTCAGGTCATAATTTTATCTGGGTTGTAAGGAAAAAGGAAAGAGATGAGAGTGAAAACAGTTTCCTACAAGATTTTGAGGAAAGGATGAAAGAAAGCAAAAAGGGATATATCATATGGAATTGGGCACCACAACTTCTGATATTGGATCACCATGCAACAGGAGGGATTGTGACTCACTGTGGATGGAACTCAATTCTTGAAAGCGTGAACTCGGGTTTGCCAATGATCGCATGGCCAATGTCTGAGGAGCAATTTTACAATGAGAAGTTACTTGTCGATGTTTTGAAGATAGGGGTTTCAGTAGGAGCAAAAGAAAACAAGTTATGGACTAGCACTAGTAGTGAAGACGTAGCGGTGAAAAGGGAAGAGATAGCGAAGGCTGTAGAGATTCTGATGGGAAGTGGCCAAGAGAGCAAGGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAAGACTATAGAGGAAGGTGGACACTCTTACAATAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCTAAAACACTCGGTAACGAGGATGAAATAGAGGAGTAA
Protein sequence

>Msa1025790

MYGKISREIWMLQNQIEGLFQDLQPDCIVTDMLYPWTVQAAAKLGIQRIHYYSSSYFSNCAAHFMMKYRPHDNLVSDTQKFTIPCFPHTIEMTPQQLPDWFRTKNPAAAFFEPVFESEKRISSWANKDDEKKGNRGHMEELGKEAEWPNWLNSRQNESVLYVSFGSVNRLDNAQIVEIAHGLENSGHNFIWVVRKKERDESENSFLQDFEERMKESKKGYIIWNWAPQLLILDHHATGGIVTHCGWNSILESVNSGLPMIAWPMSEEQFYNEKLLVDVLKIGVSVGAKENKLWTSTSSEDVAVKREEIAKAVEILMGSGQESKEMRMRAKKLGDAAKKTIEEGGHSYNNLIQLIDELKSLKKSKTLGNEDEIEE*