Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028570 | XP_003624092.1 | 94.040 | 151 | 9 | 0 | 1 | 151 | 1 | 151 | 4.78e-98 | 289 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028570 | sp|P46519|LEA14_SOYBN | 78.523 | 149 | 32 | 0 | 3 | 151 | 4 | 152 | 4.24e-84 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028570 | G7L6Q4 | 94.040 | 151 | 9 | 0 | 1 | 151 | 1 | 151 | 2.28e-98 | 289 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025670 | Msa1028570 | -0.809322 | 2.003770e-50 | -8.615850e-47 |
| Msa1028570 | Msa1112990 | 0.852809 | 3.618949e-61 | -8.615850e-47 |
| Msa0968320 | Msa1028570 | 0.811401 | 7.130367e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028570 | MtrunA17_Chr7g0248741 | 94.040 | 151 | 9 | 0 | 1 | 151 | 1 | 151 | 4.39e-102 | 289 |
| Msa1028570 | MtrunA17_Chr8g0348171 | 71.141 | 149 | 43 | 0 | 3 | 151 | 4 | 152 | 8.20e-80 | 233 |
| Msa1028570 | MtrunA17_Chr5g0441301 | 32.237 | 152 | 89 | 4 | 3 | 144 | 35 | 182 | 2.64e-18 | 79.7 |
| Msa1028570 | MtrunA17_Chr3g0093721 | 32.117 | 137 | 90 | 1 | 11 | 144 | 36 | 172 | 1.08e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028570 | AT1G01470.1 | 61.486 | 148 | 57 | 0 | 3 | 150 | 4 | 151 | 5.10e-67 | 200 |
| Msa1028570 | AT2G46140.1 | 62.162 | 148 | 56 | 0 | 3 | 150 | 19 | 166 | 2.32e-63 | 192 |
| Msa1028570 | AT2G44060.2 | 30.065 | 153 | 99 | 2 | 3 | 148 | 42 | 193 | 7.63e-19 | 81.3 |
| Msa1028570 | AT2G44060.1 | 30.065 | 153 | 99 | 2 | 3 | 148 | 42 | 193 | 7.63e-19 | 81.3 |
Find 50 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTGATCTTCCTATTAT+TGG | 0.195681 | 7_1:+61636080 | Msa1028570:CDS |
| ACCATTCCTCTTTGTCAAAA+AGG | 0.214029 | 7_1:+61636110 | Msa1028570:CDS |
| ACGTCAGTCTGTTGAGTATT+TGG | 0.258676 | 7_1:+61634163 | Msa1028570:CDS |
| GTTACCTTGGTAAAGGATAT+TGG | 0.285981 | 7_1:+61636017 | Msa1028570:CDS |
| TCACTGGCTTTCAATGATCC+TGG | 0.341581 | 7_1:-61635948 | None:intergenic |
| ACTATATTGCTGAGAAAGTT+GGG | 0.351702 | 7_1:+61634087 | Msa1028570:CDS |
| ACTCCTTCAAAAGTGCTAAC+AGG | 0.357639 | 7_1:+61634243 | Msa1028570:CDS |
| ATTGGAATAGAAGTAGAATA+AGG | 0.358121 | 7_1:-61634206 | None:intergenic |
| ACGTGCTAGTCCTAGTAATT+TGG | 0.362492 | 7_1:-61630182 | None:intergenic |
| TATTACAGATGTTGATTTCA+AGG | 0.387851 | 7_1:+61634133 | Msa1028570:CDS |
| CACTGGCTTTCAATGATCCT+GGG | 0.407046 | 7_1:-61635947 | None:intergenic |
| TTGGGACATTGATTATCAAT+TGG | 0.408268 | 7_1:+61636046 | Msa1028570:CDS |
| GACTTAAGTATTTGAAATCA+AGG | 0.413608 | 7_1:+61636323 | Msa1028570:three_prime_UTR |
| CAAAGAAGTCAGAGATGCTT+GGG | 0.413925 | 7_1:-61636145 | None:intergenic |
| GTAATATCTGCCTCAGGTTT+AGG | 0.415240 | 7_1:-61634116 | None:intergenic |
| GAGTACTTGATGTCACAAAT+TGG | 0.418355 | 7_1:-61634224 | None:intergenic |
| AACTATATTGCTGAGAAAGT+TGG | 0.425193 | 7_1:+61634086 | Msa1028570:CDS |
| TAAAGGATATTGGTGCTGAT+TGG | 0.447897 | 7_1:+61636027 | Msa1028570:CDS |
| ATGGTGAAACTGCCAATAAT+AGG | 0.448064 | 7_1:-61636092 | None:intergenic |
| CCATTTATTAGTCGCTTCAA+TGG | 0.457476 | 7_1:-61636418 | None:intergenic |
| GCCTAGTTTGATCCACTATG+AGG | 0.457511 | 7_1:+61636167 | Msa1028570:exon |
| CCATGATTGATGATGGTTGA+TGG | 0.458066 | 7_1:-61630294 | None:intergenic |
| CATAATTGTTACCTTGGTAA+AGG | 0.470478 | 7_1:+61636010 | Msa1028570:CDS |
| TCATAACATAATTGTTACCT+TGG | 0.473108 | 7_1:+61636004 | Msa1028570:CDS |
| GCAAAGAAGTCAGAGATGCT+TGG | 0.474955 | 7_1:-61636146 | None:intergenic |
| GCTTTCAATGATCCTGGGTC+TGG | 0.476763 | 7_1:-61635942 | None:intergenic |
| AAAGGATATTGGTGCTGATT+GGG | 0.479011 | 7_1:+61636028 | Msa1028570:CDS |
| AATATGAAGGTGAGTTATGA+AGG | 0.495325 | 7_1:-61630207 | None:intergenic |
| TACTTTAACACCAAATTACT+AGG | 0.495921 | 7_1:+61630172 | None:intergenic |
| GATGTAAAAGCAAAACATAA+TGG | 0.497019 | 7_1:-61636224 | None:intergenic |
| ATTAAGCAATGTTGTGTCAC+TGG | 0.497456 | 7_1:-61635964 | None:intergenic |
| CCATCAACCATCATCAATCA+TGG | 0.497943 | 7_1:+61630294 | Msa1028570:exon |
| ATTAGTCGCTTCAATGGAAG+TGG | 0.500044 | 7_1:-61636412 | None:intergenic |
| TATTGTCTTGTGAATGAAGA+TGG | 0.501394 | 7_1:-61630230 | None:intergenic |
| GCCTCATAGTGGATCAAACT+AGG | 0.508903 | 7_1:-61636168 | None:intergenic |
| CTTACATCCATGATTGATGA+TGG | 0.515645 | 7_1:-61630301 | None:intergenic |
| CATGATTGATGATGGTTGAT+GGG | 0.517963 | 7_1:-61630293 | None:intergenic |
| ATAATCAGGGAGATAGCATC+AGG | 0.522056 | 7_1:+61635912 | Msa1028570:intron |
| ACATCTGTAATATCTGCCTC+AGG | 0.544170 | 7_1:-61634122 | None:intergenic |
| CTATTATATATGCCTCATAG+TGG | 0.548099 | 7_1:-61636179 | None:intergenic |
| AAGGTAACAATTATGTTATG+AGG | 0.551648 | 7_1:-61636002 | None:intergenic |
| TTACAGATTGGGGTTAAACA+TGG | 0.573744 | 7_1:+61636367 | Msa1028570:three_prime_UTR |
| CTATATTGCTGAGAAAGTTG+GGG | 0.616635 | 7_1:+61634088 | Msa1028570:CDS |
| ATGATTGATGATGGTTGATG+GGG | 0.642423 | 7_1:-61630292 | None:intergenic |
| TGGGGAAATGCCTAAACCTG+AGG | 0.658468 | 7_1:+61634106 | Msa1028570:CDS |
| AGCACCAATATCCTTTACCA+AGG | 0.661700 | 7_1:-61636021 | None:intergenic |
| TCAGGAACTGTACCAGACCC+AGG | 0.679182 | 7_1:+61635930 | Msa1028570:CDS |
| TGAATGAAGATGGAATATGA+AGG | 0.697902 | 7_1:-61630220 | None:intergenic |
| ATTGCTTAATGTGCTAGTGA+AGG | 0.702998 | 7_1:+61635977 | Msa1028570:CDS |
| TGATTGATGATGGTTGATGG+GGG | 0.756195 | 7_1:-61630291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTAATAATTAATTAA+TGG | + | chr7_1:61630606-61630625 | Msa1028570:intron | 0.0% |
| !!! | ATTAATTAATGGTAAATTTT+CGG | + | chr7_1:61630617-61630636 | Msa1028570:intron | 10.0% |
| !!! | TAATATTAGTCTTAAAATTT+GGG | - | chr7_1:61630788-61630807 | None:intergenic | 10.0% |
| !!! | ATAATATTAGTCTTAAAATT+TGG | - | chr7_1:61630789-61630808 | None:intergenic | 10.0% |
| !!! | ATTTTATGATTTTATTTGAT+AGG | - | chr7_1:61631389-61631408 | None:intergenic | 10.0% |
| !!! | ATTTGATTTTTAGAATTTTT+TGG | - | chr7_1:61631425-61631444 | None:intergenic | 10.0% |
| !!! | ATCATTTTCTTATAAAAAAA+TGG | + | chr7_1:61633234-61633253 | Msa1028570:intron | 10.0% |
| !!! | GATATATGTATTTTTAATTT+TGG | - | chr7_1:61633693-61633712 | None:intergenic | 10.0% |
| !!! | TTTTAGTTTTGATTTATATT+AGG | + | chr7_1:61634294-61634313 | Msa1028570:intron | 10.0% |
| !!! | TTTAGTTTTGATTTATATTA+GGG | + | chr7_1:61634295-61634314 | Msa1028570:intron | 10.0% |
| !!! | TTCAATATCTTTAAAAAAAT+TGG | + | chr7_1:61634448-61634467 | Msa1028570:intron | 10.0% |
| !!! | TTTTTAAAAAGACAAAATAA+CGG | - | chr7_1:61634828-61634847 | None:intergenic | 10.0% |
| !!! | AAAACTAATGCAAATTTTTT+CGG | + | chr7_1:61631445-61631464 | Msa1028570:intron | 15.0% |
| !!! | AAAGCATTTTTGAAAAAAAT+AGG | + | chr7_1:61631942-61631961 | Msa1028570:intron | 15.0% |
| !!! | AAGCATTTTTGAAAAAAATA+GGG | + | chr7_1:61631943-61631962 | Msa1028570:intron | 15.0% |
| !!! | AGCTTAGATAAATTTTTTAT+GGG | - | chr7_1:61632221-61632240 | None:intergenic | 15.0% |
| !!! | AAGCTTAGATAAATTTTTTA+TGG | - | chr7_1:61632222-61632241 | None:intergenic | 15.0% |
| !!! | AAAAAATTTATCTAAGCTTT+TGG | + | chr7_1:61632223-61632242 | Msa1028570:intron | 15.0% |
| !! | AGTTTAATTGAATAATTCAA+AGG | + | chr7_1:61632832-61632851 | Msa1028570:intron | 15.0% |
| !! | GTTTAATTGAATAATTCAAA+GGG | + | chr7_1:61632833-61632852 | Msa1028570:intron | 15.0% |
| !! | AATTAAAAAATTGGAAGATT+GGG | - | chr7_1:61633636-61633655 | None:intergenic | 15.0% |
| !! | TTGATAGAGAATTAAAAAAT+TGG | - | chr7_1:61633645-61633664 | None:intergenic | 15.0% |
| !!! | TTTTTCATCTTTTGATTTTT+TGG | + | chr7_1:61633958-61633977 | Msa1028570:intron | 15.0% |
| !!! | TTTTCATCTTTTGATTTTTT+GGG | + | chr7_1:61633959-61633978 | Msa1028570:intron | 15.0% |
| !! | AAATACTTTCATCATATATT+AGG | + | chr7_1:61634504-61634523 | Msa1028570:intron | 15.0% |
| !!! | TTGTCTTTTTAAAAAGATTT+TGG | + | chr7_1:61634833-61634852 | Msa1028570:intron | 15.0% |
| !! | ACATGCATATGATTATATAT+AGG | - | chr7_1:61630387-61630406 | None:intergenic | 20.0% |
| !!! | TATGCACATTTAATTTCATA+TGG | + | chr7_1:61630432-61630451 | Msa1028570:intron | 20.0% |
| !!! | CATTTAATTTCATATGGATA+TGG | + | chr7_1:61630438-61630457 | Msa1028570:intron | 20.0% |
| !! | ACTCATAAATAAGAATTGTT+CGG | - | chr7_1:61631289-61631308 | None:intergenic | 20.0% |
| !! | AGAAAATCAGAAAAAATTCA+AGG | - | chr7_1:61631587-61631606 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTTCTGATTTTC+TGG | + | chr7_1:61631586-61631605 | Msa1028570:intron | 20.0% |
| !!! | TGAATTTTTTCTGATTTTCT+GGG | + | chr7_1:61631587-61631606 | Msa1028570:intron | 20.0% |
| !!! | TAACATGGATAGTTATTTTA+GGG | - | chr7_1:61631722-61631741 | None:intergenic | 20.0% |
| !!! | TGGTATTTTCTTTTGTTAAA+GGG | - | chr7_1:61631895-61631914 | None:intergenic | 20.0% |
| !!! | ATGGTATTTTCTTTTGTTAA+AGG | - | chr7_1:61631896-61631915 | None:intergenic | 20.0% |
| !!! | AACATTTTCTCATATTTGAT+CGG | - | chr7_1:61632704-61632723 | None:intergenic | 20.0% |
| !!! | TTTTTTATATTGGCTAATGA+AGG | - | chr7_1:61632800-61632819 | None:intergenic | 20.0% |
| !!! | AAGTTTGGTATTTTGAATTA+GGG | - | chr7_1:61633028-61633047 | None:intergenic | 20.0% |
| !!! | TAAGTTTGGTATTTTGAATT+AGG | - | chr7_1:61633029-61633048 | None:intergenic | 20.0% |
| !!! | AGAAAACATTTTTTTGCTTA+TGG | - | chr7_1:61633143-61633162 | None:intergenic | 20.0% |
| !!! | GAAAGAAATCATTTTCTTTA+TGG | + | chr7_1:61633256-61633275 | Msa1028570:intron | 20.0% |
| !! | ATAAAAAATTCCATCGTAAA+CGG | - | chr7_1:61633288-61633307 | None:intergenic | 20.0% |
| !!! | TGGTGTTAAAATACTTTATA+TGG | - | chr7_1:61633437-61633456 | None:intergenic | 20.0% |
| !! | GAATTAAAAAATTGGAAGAT+TGG | - | chr7_1:61633637-61633656 | None:intergenic | 20.0% |
| !! | AATCATGTATCAAAATCAAT+AGG | + | chr7_1:61633740-61633759 | Msa1028570:intron | 20.0% |
| !! | ATCATGTATCAAAATCAATA+GGG | + | chr7_1:61633741-61633760 | Msa1028570:intron | 20.0% |
| !! | TGATTTATATTAGGGTTAAT+TGG | + | chr7_1:61634303-61634322 | Msa1028570:intron | 20.0% |
| !! | TTTAAAAAAATTGGAGTCAA+TGG | + | chr7_1:61634457-61634476 | Msa1028570:intron | 20.0% |
| !! | TCATCATATATTAGGATTAT+TGG | + | chr7_1:61634512-61634531 | Msa1028570:intron | 20.0% |
| !! | ATCGAACATATTAAAATTAG+AGG | + | chr7_1:61634787-61634806 | Msa1028570:intron | 20.0% |
| !!! | TTTTTTTGATGTTGATGTTT+TGG | - | chr7_1:61635011-61635030 | None:intergenic | 20.0% |
| !! | ATAGTACTCCATTAAATAAT+TGG | + | chr7_1:61635229-61635248 | Msa1028570:intron | 20.0% |
| !!! | GGTGCTTTTATTTATTTTAT+TGG | - | chr7_1:61636206-61636225 | None:intergenic | 20.0% |
| ! | GATCAAAGAAAATTTGTAGT+TGG | - | chr7_1:61630490-61630509 | None:intergenic | 25.0% |
| !! | TGATGTTGATTATAGTTGTT+AGG | + | chr7_1:61630577-61630596 | Msa1028570:intron | 25.0% |
| ! | CTCACTTATAAACACATATT+CGG | - | chr7_1:61630717-61630736 | None:intergenic | 25.0% |
| !!! | TTGTGATTAACAGCTTTTTT+TGG | + | chr7_1:61630812-61630831 | Msa1028570:intron | 25.0% |
| ! | AGAATTGTTATGATCATAAG+AGG | + | chr7_1:61631099-61631118 | Msa1028570:intron | 25.0% |
| !!! | GCATTTTTGGAAATTTTACA+GGG | - | chr7_1:61631207-61631226 | None:intergenic | 25.0% |
| ! | CGGATTCATGTTTATTATTT+CGG | + | chr7_1:61631253-61631272 | Msa1028570:intron | 25.0% |
| !!! | GAATTTTTTCTGATTTTCTG+GGG | + | chr7_1:61631588-61631607 | Msa1028570:intron | 25.0% |
| !!! | GTAACATGGATAGTTATTTT+AGG | - | chr7_1:61631723-61631742 | None:intergenic | 25.0% |
| ! | TTCTAAACATGTTTGTAACA+TGG | - | chr7_1:61631737-61631756 | None:intergenic | 25.0% |
| ! | TCCGTAAACTTCAAAAAATA+GGG | - | chr7_1:61631834-61631853 | None:intergenic | 25.0% |
| ! | ATCCGTAAACTTCAAAAAAT+AGG | - | chr7_1:61631835-61631854 | None:intergenic | 25.0% |
| !!! | AAATGAGTAACGGATTTTTT+CGG | - | chr7_1:61631866-61631885 | None:intergenic | 25.0% |
| ! | AACAAAAGAAAATACCATTC+CGG | + | chr7_1:61631898-61631917 | Msa1028570:intron | 25.0% |
| !!! | AGTTTCTGGATTTTATAATC+CGG | - | chr7_1:61631920-61631939 | None:intergenic | 25.0% |
| !!! | GAATTACTTTTTCTATCATG+TGG | - | chr7_1:61631981-61632000 | None:intergenic | 25.0% |
| ! | TGACTAAAAAATGACTTCAT+AGG | + | chr7_1:61632188-61632207 | Msa1028570:intron | 25.0% |
| ! | TGAATTAGATAAGACTACAA+TGG | - | chr7_1:61632578-61632597 | None:intergenic | 25.0% |
| ! | GTCAAATGTTACGATTATTA+TGG | + | chr7_1:61632641-61632660 | Msa1028570:intron | 25.0% |
| !! | TGACTTAAAATTTCCACTTT+TGG | - | chr7_1:61632898-61632917 | None:intergenic | 25.0% |
| !!! | GTTTACGATGGAATTTTTTA+TGG | + | chr7_1:61633287-61633306 | Msa1028570:intron | 25.0% |
| !!! | TATTTTATCCCCTTAATTTG+AGG | + | chr7_1:61633402-61633421 | Msa1028570:intron | 25.0% |
| !! | AATTGATAGCCTCAAATTAA+GGG | - | chr7_1:61633414-61633433 | None:intergenic | 25.0% |
| !!! | TATTTTAACACCAAATTACC+TGG | + | chr7_1:61633444-61633463 | Msa1028570:intron | 25.0% |
| ! | ATGAAAGAGAGAAAATAGAT+TGG | - | chr7_1:61633607-61633626 | None:intergenic | 25.0% |
| ! | ATTGAAAATGTCACAGTTAT+TGG | + | chr7_1:61634052-61634071 | Msa1028570:intron | 25.0% |
| !! | TTTCTCAGCAATATAGTTTT+TGG | - | chr7_1:61634084-61634103 | None:intergenic | 25.0% |
| !!! | TATTACAGATGTTGATTTCA+AGG | + | chr7_1:61634133-61634152 | Msa1028570:CDS | 25.0% |
| ! | ATTGGAATAGAAGTAGAATA+AGG | - | chr7_1:61634209-61634228 | None:intergenic | 25.0% |
| !!! | TTAGATTGGTTGATTTGTAA+CGG | + | chr7_1:61634374-61634393 | Msa1028570:intron | 25.0% |
| ! | CAAAAACAAATTTGAGTCAA+AGG | + | chr7_1:61634481-61634500 | Msa1028570:intron | 25.0% |
| !! | TATTAGGATTATTGGTAACT+TGG | + | chr7_1:61634520-61634539 | Msa1028570:intron | 25.0% |
| !! | AAACTTTTATGACACAAAGT+AGG | - | chr7_1:61634619-61634638 | None:intergenic | 25.0% |
| ! | TATTCCTTAACTCAAATCAT+TGG | - | chr7_1:61634652-61634671 | None:intergenic | 25.0% |
| !! | ATGATTTGAGTTAAGGAATA+AGG | + | chr7_1:61634652-61634671 | Msa1028570:intron | 25.0% |
| !!! | AAGTTTTTTGCTTGATAAGT+GGG | - | chr7_1:61634969-61634988 | None:intergenic | 25.0% |
| ! | AACATCAACATCAAAAAAAC+AGG | + | chr7_1:61635012-61635031 | Msa1028570:intron | 25.0% |
| ! | CAAGATCACCAATTATTTAA+TGG | - | chr7_1:61635240-61635259 | None:intergenic | 25.0% |
| !! | AAATAATTGGTGATCTTGAT+TGG | + | chr7_1:61635242-61635261 | Msa1028570:intron | 25.0% |
| ! | ATAATGTAGTATACAACAGA+AGG | - | chr7_1:61635459-61635478 | None:intergenic | 25.0% |
| ! | CAAATTCTTAAGACCAAAAT+TGG | + | chr7_1:61635480-61635499 | Msa1028570:intron | 25.0% |
| ! | ATAATGTAGTATACAACAGA+AGG | - | chr7_1:61635459-61635478 | None:intergenic | 25.0% |
| ! | CAAATTCTTAAGACCAAAAT+TGG | + | chr7_1:61635480-61635499 | Msa1028570:intron | 25.0% |
| !!! | TATGTTTGATGATGATAATC+AGG | + | chr7_1:61635898-61635917 | Msa1028570:intron | 25.0% |
| !!! | ATGTTTGATGATGATAATCA+GGG | + | chr7_1:61635899-61635918 | Msa1028570:intron | 25.0% |
| ! | AAGGTAACAATTATGTTATG+AGG | - | chr7_1:61636005-61636024 | None:intergenic | 25.0% |
| ! | TCATAACATAATTGTTACCT+TGG | + | chr7_1:61636004-61636023 | Msa1028570:CDS | 25.0% |
| ! | GTTATTGATCTTCCTATTAT+TGG | + | chr7_1:61636080-61636099 | Msa1028570:CDS | 25.0% |
| ! | GATGTAAAAGCAAAACATAA+TGG | - | chr7_1:61636227-61636246 | None:intergenic | 25.0% |
| !! | TTACATCATTTTCGATTTAC+TGG | + | chr7_1:61636240-61636259 | Msa1028570:three_prime_UTR | 25.0% |
| !! | GACTTAAGTATTTGAAATCA+AGG | + | chr7_1:61636323-61636342 | Msa1028570:three_prime_UTR | 25.0% |
| !!! | TTTGAAATCAAGGTTTTGAA+TGG | + | chr7_1:61636333-61636352 | Msa1028570:three_prime_UTR | 25.0% |
| !! | AAGTTTTCTTGTTACAGATT+GGG | + | chr7_1:61636356-61636375 | Msa1028570:three_prime_UTR | 25.0% |
| AATATGAAGGTGAGTTATGA+AGG | - | chr7_1:61630210-61630229 | None:intergenic | 30.0% | |
| TGAATGAAGATGGAATATGA+AGG | - | chr7_1:61630223-61630242 | None:intergenic | 30.0% | |
| TATTGTCTTGTGAATGAAGA+TGG | - | chr7_1:61630233-61630252 | None:intergenic | 30.0% | |
| TTTCAGTTCTCTAAGTTAGT+AGG | - | chr7_1:61630958-61630977 | None:intergenic | 30.0% | |
| AGAGAACTGAAAAATCACAT+TGG | + | chr7_1:61630966-61630985 | Msa1028570:intron | 30.0% | |
| AATGCCATAGACTATAGTTT+CGG | + | chr7_1:61631019-61631038 | Msa1028570:intron | 30.0% | |
| GTATTTGTATGCGAATTGAT+GGG | - | chr7_1:61631070-61631089 | None:intergenic | 30.0% | |
| TCATAACAATTCTATGAGAC+AGG | - | chr7_1:61631092-61631111 | None:intergenic | 30.0% | |
| AGAAATCACTAAGCTCAATA+TGG | - | chr7_1:61631131-61631150 | None:intergenic | 30.0% | |
| !! | GTATTACTTTTCCCATTCTA+TGG | + | chr7_1:61631169-61631188 | Msa1028570:intron | 30.0% |
| !! | GGCATTTTTGGAAATTTTAC+AGG | - | chr7_1:61631208-61631227 | None:intergenic | 30.0% |
| TGAATCCGAATTTCAAAATC+CGG | - | chr7_1:61631241-61631260 | None:intergenic | 30.0% | |
| ! | CGATGAAATTTTGGATTTTG+AGG | + | chr7_1:61631520-61631539 | Msa1028570:intron | 30.0% |
| !!! | AAATTTTGGATTTTGAGGTG+CGG | + | chr7_1:61631525-61631544 | Msa1028570:intron | 30.0% |
| ! | TTAGTCAAAAATCGGGTTTT+CGG | - | chr7_1:61631642-61631661 | None:intergenic | 30.0% |
| ACCTGTTCTTAGTCAAAAAT+CGG | - | chr7_1:61631650-61631669 | None:intergenic | 30.0% | |
| ! | TTTGTGTTGATACCTTGAAA+AGG | + | chr7_1:61631757-61631776 | Msa1028570:intron | 30.0% |
| ! | TTGTGTTGATACCTTGAAAA+GGG | + | chr7_1:61631758-61631777 | Msa1028570:intron | 30.0% |
| TGTTTCAGGATTACATAATC+CGG | - | chr7_1:61631799-61631818 | None:intergenic | 30.0% | |
| !!! | GCCCTATTTTTTGAAGTTTA+CGG | + | chr7_1:61631830-61631849 | Msa1028570:intron | 30.0% |
| AGGGTGAAAAAAATGAGTAA+CGG | - | chr7_1:61631876-61631895 | None:intergenic | 30.0% | |
| !!! | CAAAAATGCTTTTGAGTTTC+TGG | - | chr7_1:61631934-61631953 | None:intergenic | 30.0% |
| GTGATTGTTCTACTAACTTT+CGG | + | chr7_1:61632022-61632041 | Msa1028570:intron | 30.0% | |
| ! | CTGCATCGTTACAATTTTAT+AGG | - | chr7_1:61632150-61632169 | None:intergenic | 30.0% |
| AACTAAAAGAAAGAGAAGAG+TGG | - | chr7_1:61632417-61632436 | None:intergenic | 30.0% | |
| GAAGATGTGACTAATGATAT+TGG | + | chr7_1:61632663-61632682 | Msa1028570:intron | 30.0% | |
| CATATTTGATCGGTCTAAAT+CGG | - | chr7_1:61632694-61632713 | None:intergenic | 30.0% | |
| ! | TGATGGTCTAGATTTAAGTT+TGG | - | chr7_1:61633043-61633062 | None:intergenic | 30.0% |
| ! | ATTGATAGCCTCAAATTAAG+GGG | - | chr7_1:61633413-61633432 | None:intergenic | 30.0% |
| ! | GAATTGATAGCCTCAAATTA+AGG | - | chr7_1:61633415-61633434 | None:intergenic | 30.0% |
| AATATGAAGGTGAGTTATGA+AGG | - | chr7_1:61630210-61630229 | None:intergenic | 30.0% | |
| TGAATGAAGATGGAATATGA+AGG | - | chr7_1:61630223-61630242 | None:intergenic | 30.0% | |
| TAAAAAATTGGAAGATTGGG+TGG | - | chr7_1:61633633-61633652 | None:intergenic | 30.0% | |
| TATCAAAATCAATAGGGCAT+GGG | + | chr7_1:61633747-61633766 | Msa1028570:intron | 30.0% | |
| !!! | AATGTTTTTGGATCATGTGT+AGG | - | chr7_1:61633803-61633822 | None:intergenic | 30.0% |
| ! | CGTTTTGTGAGTAATGTTTT+TGG | - | chr7_1:61633815-61633834 | None:intergenic | 30.0% |
| GATAATAATGAGGTTGTTGT+CGG | - | chr7_1:61633841-61633860 | None:intergenic | 30.0% | |
| CTCATTATTATCATCGACAT+CGG | + | chr7_1:61633849-61633868 | Msa1028570:intron | 30.0% | |
| ATGAAAAAGTGAATAACACG+TGG | - | chr7_1:61633946-61633965 | None:intergenic | 30.0% | |
| !! | TTTTTGGGCACTATAAATCA+TGG | + | chr7_1:61633974-61633993 | Msa1028570:intron | 30.0% |
| ! | TTTTGGGCACTATAAATCAT+GGG | + | chr7_1:61633975-61633994 | Msa1028570:intron | 30.0% |
| AACTATATTGCTGAGAAAGT+TGG | + | chr7_1:61634086-61634105 | Msa1028570:CDS | 30.0% | |
| ACTATATTGCTGAGAAAGTT+GGG | + | chr7_1:61634087-61634106 | Msa1028570:CDS | 30.0% | |
| !!! | GAGTTGAGACTTTATTTTAG+TGG | + | chr7_1:61634339-61634358 | Msa1028570:intron | 30.0% |
| !!! | GAGACTTTATTTTAGTGGAT+CGG | + | chr7_1:61634344-61634363 | Msa1028570:intron | 30.0% |
| !! | ATTTGTAACGGAATGGATTA+TGG | + | chr7_1:61634386-61634405 | Msa1028570:intron | 30.0% |
| ! | GGATTATGGTAGTTGAATTT+TGG | + | chr7_1:61634400-61634419 | Msa1028570:intron | 30.0% |
| !! | CTTGTTGAAATGTTTTTCGA+AGG | + | chr7_1:61634547-61634566 | Msa1028570:intron | 30.0% |
| ! | GATTCCAATGATTTGAGTTA+AGG | + | chr7_1:61634645-61634664 | Msa1028570:intron | 30.0% |
| ATTACCAATGCATGTAATTG+TGG | - | chr7_1:61634722-61634741 | None:intergenic | 30.0% | |
| CATATGTGGTTATGATTGTT+AGG | - | chr7_1:61634874-61634893 | None:intergenic | 30.0% | |
| ! | GAAATTGGATTTTCTCAAGT+CGG | - | chr7_1:61634924-61634943 | None:intergenic | 30.0% |
| !! | GTCTTGGAGTTTTATGAAAT+TGG | - | chr7_1:61634939-61634958 | None:intergenic | 30.0% |
| !!! | GAAGTTTTTTGCTTGATAAG+TGG | - | chr7_1:61634970-61634989 | None:intergenic | 30.0% |
| !!! | TTGATGTTTTGGTTGATGTT+AGG | - | chr7_1:61635000-61635019 | None:intergenic | 30.0% |
| !!! | TCAAAGGGCATGTTATTTTT+GGG | - | chr7_1:61635091-61635110 | None:intergenic | 30.0% |
| !!! | TTCAAAGGGCATGTTATTTT+TGG | - | chr7_1:61635092-61635111 | None:intergenic | 30.0% |
| ! | AAGGTTAATTGGTGTTCAAA+GGG | - | chr7_1:61635106-61635125 | None:intergenic | 30.0% |
| ! | TAAGGTTAATTGGTGTTCAA+AGG | - | chr7_1:61635107-61635126 | None:intergenic | 30.0% |
| ! | TTGCAAGACTTTTAAGCAAT+TGG | + | chr7_1:61635281-61635300 | Msa1028570:intron | 30.0% |
| GTAAAATGCTCACTTTATAG+AGG | + | chr7_1:61635330-61635349 | Msa1028570:intron | 30.0% | |
| AGATCAATAATGCTCCTTAT+GGG | - | chr7_1:61635362-61635381 | None:intergenic | 30.0% | |
| AAGATCAATAATGCTCCTTA+TGG | - | chr7_1:61635363-61635382 | None:intergenic | 30.0% | |
| ! | AGATGTAGTAAAGCCAATTT+TGG | - | chr7_1:61635496-61635515 | None:intergenic | 30.0% |
| TTTGCTCAAAATATACTGAG+AGG | - | chr7_1:61635534-61635553 | None:intergenic | 30.0% | |
| ! | AGATGTAGTAAAGCCAATTT+TGG | - | chr7_1:61635496-61635515 | None:intergenic | 30.0% |
| TTTGCTCAAAATATACTGAG+AGG | - | chr7_1:61635534-61635553 | None:intergenic | 30.0% | |
| CATAATTGTTACCTTGGTAA+AGG | + | chr7_1:61636010-61636029 | Msa1028570:CDS | 30.0% | |
| ! | TTGGGACATTGATTATCAAT+TGG | + | chr7_1:61636046-61636065 | Msa1028570:CDS | 30.0% |
| CTATTATATATGCCTCATAG+TGG | - | chr7_1:61636182-61636201 | None:intergenic | 30.0% | |
| ! | CAACAAAAAGTACAACCAAA+GGG | - | chr7_1:61636277-61636296 | None:intergenic | 30.0% |
| !! | GTTGTACTTTTTGTTGGTTA+TGG | + | chr7_1:61636281-61636300 | Msa1028570:three_prime_UTR | 30.0% |
| ! | GAAGTTTTCTTGTTACAGAT+TGG | + | chr7_1:61636355-61636374 | Msa1028570:three_prime_UTR | 30.0% |
| ! | AGTTTTCTTGTTACAGATTG+GGG | + | chr7_1:61636357-61636376 | Msa1028570:three_prime_UTR | 30.0% |
| !! | ATGATTGATGATGGTTGATG+GGG | - | chr7_1:61630295-61630314 | None:intergenic | 35.0% |
| !! | CATGATTGATGATGGTTGAT+GGG | - | chr7_1:61630296-61630315 | None:intergenic | 35.0% |
| CTTACATCCATGATTGATGA+TGG | - | chr7_1:61630304-61630323 | None:intergenic | 35.0% | |
| ACTCCAAATTACATACGATC+CGG | + | chr7_1:61630905-61630924 | Msa1028570:intron | 35.0% | |
| TTCAATCATGCATATGAAGC+CGG | - | chr7_1:61630927-61630946 | None:intergenic | 35.0% | |
| ATTGGTGAGATGATATACCT+TGG | + | chr7_1:61630984-61631003 | Msa1028570:intron | 35.0% | |
| TCTATGGCATTCCATTCATA+GGG | - | chr7_1:61631010-61631029 | None:intergenic | 35.0% | |
| GAAACCGAAACTATAGTCTA+TGG | - | chr7_1:61631026-61631045 | None:intergenic | 35.0% | |
| GGTATTTGTATGCGAATTGA+TGG | - | chr7_1:61631071-61631090 | None:intergenic | 35.0% | |
| !!! | GCATTCCGGATTTTGAAATT+CGG | + | chr7_1:61631233-61631252 | Msa1028570:intron | 35.0% |
| ! | GGGTCTAAACGATGAAATTT+TGG | + | chr7_1:61631511-61631530 | Msa1028570:intron | 35.0% |
| CCTTAGAAGAGACTTCTTAT+GGG | - | chr7_1:61631554-61631573 | None:intergenic | 35.0% | |
| CCATAAGAAGTCTCTTCTAA+GGG | + | chr7_1:61631552-61631571 | Msa1028570:intron | 35.0% | |
| ! | TAGTCAAAAATCGGGTTTTC+GGG | - | chr7_1:61631641-61631660 | None:intergenic | 35.0% |
| CCTGTTCTTAGTCAAAAATC+GGG | - | chr7_1:61631649-61631668 | None:intergenic | 35.0% | |
| AACAATGACCCAAAAACAGA+AGG | + | chr7_1:61631670-61631689 | Msa1028570:intron | 35.0% | |
| !! | ACTCTCATCCTTCTGTTTTT+GGG | - | chr7_1:61631681-61631700 | None:intergenic | 35.0% |
| ! | AACTCTCATCCTTCTGTTTT+TGG | - | chr7_1:61631682-61631701 | None:intergenic | 35.0% |
| AAAACAGAAGGATGAGAGTT+AGG | + | chr7_1:61631682-61631701 | Msa1028570:intron | 35.0% | |
| ! | TGTGTTGATACCTTGAAAAG+GGG | + | chr7_1:61631759-61631778 | Msa1028570:intron | 35.0% |
| ! | CTGGATTTTATAATCCGGAA+TGG | - | chr7_1:61631915-61631934 | None:intergenic | 35.0% |
| ATGGCATACTTCAGTGAAAT+CGG | - | chr7_1:61632076-61632095 | None:intergenic | 35.0% | |
| TCGGTGTAAAAAGTGACTAA+TGG | - | chr7_1:61632095-61632114 | None:intergenic | 35.0% | |
| AAATTCTAAGCACCAACTGT+TGG | - | chr7_1:61632120-61632139 | None:intergenic | 35.0% | |
| CAAATGTACCCATAAACACT+TGG | + | chr7_1:61632464-61632483 | Msa1028570:intron | 35.0% | |
| CATCTCATCCAAGTGTTTAT+GGG | - | chr7_1:61632475-61632494 | None:intergenic | 35.0% | |
| TCATCTCATCCAAGTGTTTA+TGG | - | chr7_1:61632476-61632495 | None:intergenic | 35.0% | |
| ! | TTGAGCTTAATCAGACGTTT+TGG | + | chr7_1:61632508-61632527 | Msa1028570:intron | 35.0% |
| ! | TCACGCATTTAAGACATCAA+TGG | + | chr7_1:61632767-61632786 | Msa1028570:intron | 35.0% |
| ATTCAAAGGGTCATGTTAAC+CGG | + | chr7_1:61632846-61632865 | Msa1028570:intron | 35.0% | |
| GGGATGCAATTAAGATTTGA+TGG | - | chr7_1:61633060-61633079 | None:intergenic | 35.0% | |
| AAAAATTCCATCGTAAACGG+AGG | - | chr7_1:61633285-61633304 | None:intergenic | 35.0% | |
| !!! | ATGGAATTTTTTATGGCGAG+TGG | + | chr7_1:61633294-61633313 | Msa1028570:intron | 35.0% |
| AACTTGCAACTTGAAAACGA+AGG | + | chr7_1:61633344-61633363 | Msa1028570:intron | 35.0% | |
| ACTTGCAACTTGAAAACGAA+GGG | + | chr7_1:61633345-61633364 | Msa1028570:intron | 35.0% | |
| TCTTGTCTTGTGAATGAAGA+TGG | - | chr7_1:61633505-61633524 | None:intergenic | 35.0% | |
| CTTACATCCATGATTGATGA+TGG | - | chr7_1:61630304-61630323 | None:intergenic | 35.0% | |
| GTATCAAAATCAATAGGGCA+TGG | + | chr7_1:61633746-61633765 | Msa1028570:intron | 35.0% | |
| CGATGTCGATGATAATAATG+AGG | - | chr7_1:61633851-61633870 | None:intergenic | 35.0% | |
| GCACTATAAATCATGGGTTT+GGG | + | chr7_1:61633981-61634000 | Msa1028570:intron | 35.0% | |
| CTATATTGCTGAGAAAGTTG+GGG | + | chr7_1:61634088-61634107 | Msa1028570:CDS | 35.0% | |
| GAGTACTTGATGTCACAAAT+TGG | - | chr7_1:61634227-61634246 | None:intergenic | 35.0% | |
| ! | AAACCTGTTAGCACTTTTGA+AGG | - | chr7_1:61634249-61634268 | None:intergenic | 35.0% |
| GGATCGGTTATAGATTAGAT+TGG | + | chr7_1:61634360-61634379 | Msa1028570:intron | 35.0% | |
| !! | TTGGTTGATTTGTAACGGAA+TGG | + | chr7_1:61634379-61634398 | Msa1028570:intron | 35.0% |
| TGAGTTAAGGAATAAGGAGT+CGG | + | chr7_1:61634658-61634677 | Msa1028570:intron | 35.0% | |
| TTGACCACAATTACATGCAT+TGG | + | chr7_1:61634715-61634734 | Msa1028570:intron | 35.0% | |
| TATGTTCGATCTCTATCGAA+TGG | - | chr7_1:61634777-61634796 | None:intergenic | 35.0% | |
| CGACAAAGTAATGACATATG+TGG | - | chr7_1:61634888-61634907 | None:intergenic | 35.0% | |
| ATGTCATTACTTTGTCGATG+CGG | + | chr7_1:61634891-61634910 | Msa1028570:intron | 35.0% | |
| !!! | TGTTTTGGTTGATGTTAGGT+GGG | - | chr7_1:61634996-61635015 | None:intergenic | 35.0% |
| !!! | ATGTTTTGGTTGATGTTAGG+TGG | - | chr7_1:61634997-61635016 | None:intergenic | 35.0% |
| TCTTGCAAATACTTACCACT+CGG | - | chr7_1:61635269-61635288 | None:intergenic | 35.0% | |
| ATTAAGCAATGTTGTGTCAC+TGG | - | chr7_1:61635967-61635986 | None:intergenic | 35.0% | |
| ATTGCTTAATGTGCTAGTGA+AGG | + | chr7_1:61635977-61635996 | Msa1028570:CDS | 35.0% | |
| GTTACCTTGGTAAAGGATAT+TGG | + | chr7_1:61636017-61636036 | Msa1028570:CDS | 35.0% | |
| !! | TAAAGGATATTGGTGCTGAT+TGG | + | chr7_1:61636027-61636046 | Msa1028570:CDS | 35.0% |
| !! | AAAGGATATTGGTGCTGATT+GGG | + | chr7_1:61636028-61636047 | Msa1028570:CDS | 35.0% |
| ATGGTGAAACTGCCAATAAT+AGG | - | chr7_1:61636095-61636114 | None:intergenic | 35.0% | |
| ACCATTCCTCTTTGTCAAAA+AGG | + | chr7_1:61636110-61636129 | Msa1028570:CDS | 35.0% | |
| ! | TCCTTTTTGACAAAGAGGAA+TGG | - | chr7_1:61636114-61636133 | None:intergenic | 35.0% |
| ! | ATCTCTCCTTTTTGACAAAG+AGG | - | chr7_1:61636119-61636138 | None:intergenic | 35.0% |
| ! | CCAACAAAAAGTACAACCAA+AGG | - | chr7_1:61636278-61636297 | None:intergenic | 35.0% |
| !! | CCTTTGGTTGTACTTTTTGT+TGG | + | chr7_1:61636275-61636294 | Msa1028570:three_prime_UTR | 35.0% |
| TTACAGATTGGGGTTAAACA+TGG | + | chr7_1:61636367-61636386 | Msa1028570:three_prime_UTR | 35.0% | |
| !! | TGATTGATGATGGTTGATGG+GGG | - | chr7_1:61630294-61630313 | None:intergenic | 40.0% |
| !! | CCATGATTGATGATGGTTGA+TGG | - | chr7_1:61630297-61630316 | None:intergenic | 40.0% |
| CCATCAACCATCATCAATCA+TGG | + | chr7_1:61630294-61630313 | Msa1028570:exon | 40.0% | |
| AAGCCGGATCGTATGTAATT+TGG | - | chr7_1:61630911-61630930 | None:intergenic | 40.0% | |
| ATATACCTTGGCCCTATGAA+TGG | + | chr7_1:61630996-61631015 | Msa1028570:intron | 40.0% | |
| GTCTATGGCATTCCATTCAT+AGG | - | chr7_1:61631011-61631030 | None:intergenic | 40.0% | |
| ! | TTTGGAAATTTTACAGGGCG+CGG | - | chr7_1:61631202-61631221 | None:intergenic | 40.0% |
| AAAAATGCCCTTGTGCATTC+CGG | + | chr7_1:61631219-61631238 | Msa1028570:intron | 40.0% | |
| TCAAAATCCGGAATGCACAA+GGG | - | chr7_1:61631229-61631248 | None:intergenic | 40.0% | |
| TTCAAAATCCGGAATGCACA+AGG | - | chr7_1:61631230-61631249 | None:intergenic | 40.0% | |
| CCCATAAGAAGTCTCTTCTA+AGG | + | chr7_1:61631551-61631570 | Msa1028570:intron | 40.0% | |
| CCCTTAGAAGAGACTTCTTA+TGG | - | chr7_1:61631555-61631574 | None:intergenic | 40.0% | |
| !! | CTGATTTTCTGGGGAAGTTT+CGG | + | chr7_1:61631597-61631616 | Msa1028570:intron | 40.0% |
| !! | CCCGATTTTTGACTAAGAAC+AGG | + | chr7_1:61631646-61631665 | Msa1028570:intron | 40.0% |
| !! | TACCTTGAAAAGGGGTGTTT+AGG | + | chr7_1:61631767-61631786 | Msa1028570:intron | 40.0% |
| !! | ACCTTGAAAAGGGGTGTTTA+GGG | + | chr7_1:61631768-61631787 | Msa1028570:intron | 40.0% |
| !! | TTCAGTGAAATCGGCTTGAA+GGG | - | chr7_1:61632067-61632086 | None:intergenic | 40.0% |
| TTTACACCGAATCCAACAGT+TGG | + | chr7_1:61632105-61632124 | Msa1028570:intron | 40.0% | |
| TAAGCACCAACTGTTGGATT+CGG | - | chr7_1:61632114-61632133 | None:intergenic | 40.0% | |
| TTCCTTAAGCCTGATTACCA+AGG | + | chr7_1:61632256-61632275 | Msa1028570:intron | 40.0% | |
| CACTAATCTCTCGGTTTCAA+CGG | + | chr7_1:61632280-61632299 | Msa1028570:intron | 40.0% | |
| ACTAATCTCTCGGTTTCAAC+GGG | + | chr7_1:61632281-61632300 | Msa1028570:intron | 40.0% | |
| !!! | ATCAGACGTTTTGGTTCGAA+TGG | + | chr7_1:61632517-61632536 | Msa1028570:intron | 40.0% |
| ATTCAGATTCCTTGTAGCCA+TGG | + | chr7_1:61632734-61632753 | Msa1028570:intron | 40.0% | |
| TTCAGATTCCTTGTAGCCAT+GGG | + | chr7_1:61632735-61632754 | Msa1028570:intron | 40.0% | |
| TGTCTTAAATGCGTGATCGT+GGG | - | chr7_1:61632763-61632782 | None:intergenic | 40.0% | |
| ATGTCTTAAATGCGTGATCG+TGG | - | chr7_1:61632764-61632783 | None:intergenic | 40.0% | |
| TAACTCCTTAACTAGTGTCC+CGG | + | chr7_1:61632985-61633004 | Msa1028570:intron | 40.0% | |
| GAAATGTTAACCAATGTCCC+GGG | - | chr7_1:61633006-61633025 | None:intergenic | 40.0% | |
| GGAAATGTTAACCAATGTCC+CGG | - | chr7_1:61633007-61633026 | None:intergenic | 40.0% | |
| CGAAACACTGATGGTAGATT+GGG | - | chr7_1:61633080-61633099 | None:intergenic | 40.0% | |
| CCAATCTACCATCAGTGTTT+CGG | + | chr7_1:61633078-61633097 | Msa1028570:intron | 40.0% | |
| TAATGCTTCCGAAACACTGA+TGG | - | chr7_1:61633089-61633108 | None:intergenic | 40.0% | |
| GAATCTTAACTGCCTGATAG+CGG | + | chr7_1:61633116-61633135 | Msa1028570:intron | 40.0% | |
| TGCAAGTTCTGCAATGGTAT+TGG | - | chr7_1:61633332-61633351 | None:intergenic | 40.0% | |
| ! | TCAAGTTGCAAGTTCTGCAA+TGG | - | chr7_1:61633338-61633357 | None:intergenic | 40.0% |
| !! | TGATTGATGATGGTTGATGG+AGG | - | chr7_1:61630294-61630313 | None:intergenic | 40.0% |
| !! | CCATGATTGATGATGGTTGA+TGG | - | chr7_1:61630297-61630316 | None:intergenic | 40.0% |
| CCATCAACCATCATCAATCA+TGG | + | chr7_1:61630294-61630313 | Msa1028570:exon | 40.0% | |
| ! | TTTTGGATCATGTGTAGGTG+TGG | - | chr7_1:61633798-61633817 | None:intergenic | 40.0% |
| GGGTGGAAGAACAATGAAAT+AGG | - | chr7_1:61633882-61633901 | None:intergenic | 40.0% | |
| GGCACTATAAATCATGGGTT+TGG | + | chr7_1:61633980-61633999 | Msa1028570:intron | 40.0% | |
| AATCATGGGTTTGGGTATGA+AGG | + | chr7_1:61633989-61634008 | Msa1028570:intron | 40.0% | |
| GTAATATCTGCCTCAGGTTT+AGG | - | chr7_1:61634119-61634138 | None:intergenic | 40.0% | |
| ACATCTGTAATATCTGCCTC+AGG | - | chr7_1:61634125-61634144 | None:intergenic | 40.0% | |
| !! | ACTCCTTCAAAAGTGCTAAC+AGG | + | chr7_1:61634243-61634262 | Msa1028570:CDS | 40.0% |
| ATAAGTGGGACATGTTGTCT+TGG | - | chr7_1:61634955-61634974 | None:intergenic | 40.0% | |
| !!! | GTTTTGGTTGATGTTAGGTG+GGG | - | chr7_1:61634995-61635014 | None:intergenic | 40.0% |
| TATTTGTCCTGCTGTATGCT+TGG | - | chr7_1:61635064-61635083 | None:intergenic | 40.0% | |
| ACCAATTAACCTTACCACAC+AGG | + | chr7_1:61635113-61635132 | Msa1028570:intron | 40.0% | |
| ! | TTAATTGGTGTTTGCCTGTG+TGG | - | chr7_1:61635130-61635149 | None:intergenic | 40.0% |
| ! | TATAGAGGTCGATTCCCATA+AGG | + | chr7_1:61635345-61635364 | Msa1028570:intron | 40.0% |
| ATAATCAGGGAGATAGCATC+AGG | + | chr7_1:61635912-61635931 | Msa1028570:intron | 40.0% | |
| AGCACCAATATCCTTTACCA+AGG | - | chr7_1:61636024-61636043 | None:intergenic | 40.0% | |
| CAAAGAAGTCAGAGATGCTT+GGG | - | chr7_1:61636148-61636167 | None:intergenic | 40.0% | |
| ! | CTGGTGTTTCTTTTTCCCTT+TGG | + | chr7_1:61636259-61636278 | Msa1028570:three_prime_UTR | 40.0% |
| CGAGTCACAGTCAAGAAGTT+CGG | + | chr7_1:61630643-61630662 | Msa1028570:intron | 45.0% | |
| AAGTTCGGTCATGTGCATGA+GGG | + | chr7_1:61630658-61630677 | Msa1028570:intron | 45.0% | |
| ! | TTGGAAATTTTACAGGGCGC+GGG | - | chr7_1:61631201-61631220 | None:intergenic | 45.0% |
| !!! | GGAATGCACAAGGGCATTTT+TGG | - | chr7_1:61631220-61631239 | None:intergenic | 45.0% |
| ! | AGTCTCTTCTAAGGGAGTCA+TGG | + | chr7_1:61631560-61631579 | Msa1028570:intron | 45.0% |
| !! | GGGTTTTCGGGCTACTTAAT+CGG | - | chr7_1:61631629-61631648 | None:intergenic | 45.0% |
| !! | CCTTGAAAAGGGGTGTTTAG+GGG | + | chr7_1:61631769-61631788 | Msa1028570:intron | 45.0% |
| !! | CTTGAAAAGGGGTGTTTAGG+GGG | + | chr7_1:61631770-61631789 | Msa1028570:intron | 45.0% |
| TGAAAAAAATAGGGCGTGCG+AGG | + | chr7_1:61631952-61631971 | Msa1028570:intron | 45.0% | |
| !! | AAATCGGCTTGAAGGGCTTA+AGG | - | chr7_1:61632060-61632079 | None:intergenic | 45.0% |
| !! | CTTCAGTGAAATCGGCTTGA+AGG | - | chr7_1:61632068-61632087 | None:intergenic | 45.0% |
| ! | GATTAGTGGCCTTGGTAATC+AGG | - | chr7_1:61632268-61632287 | None:intergenic | 45.0% |
| TACCAAGGCCACTAATCTCT+CGG | + | chr7_1:61632271-61632290 | Msa1028570:intron | 45.0% | |
| CGTTGAAACCGAGAGATTAG+TGG | - | chr7_1:61632282-61632301 | None:intergenic | 45.0% | |
| CTGGTTAAGGAAGCCAAAAG+TGG | + | chr7_1:61632882-61632901 | Msa1028570:intron | 45.0% | |
| AACTCCTTAACTAGTGTCCC+GGG | + | chr7_1:61632986-61633005 | Msa1028570:intron | 45.0% | |
| CCGAAACACTGATGGTAGAT+TGG | - | chr7_1:61633081-61633100 | None:intergenic | 45.0% | |
| TTTGCTTATGGACCGCTATC+AGG | - | chr7_1:61633131-61633150 | None:intergenic | 45.0% | |
| ATGGTTTCCTCCGTTTACGA+TGG | + | chr7_1:61633275-61633294 | Msa1028570:intron | 45.0% | |
| ACGTGCTAGTCCAGGTAATT+TGG | - | chr7_1:61633457-61633476 | None:intergenic | 45.0% | |
| !! | TTTCACGCGCTTTGAGATCT+GGG | - | chr7_1:61633902-61633921 | None:intergenic | 45.0% |
| !!! | TTTTCACGCGCTTTGAGATC+TGG | - | chr7_1:61633903-61633922 | None:intergenic | 45.0% |
| CTGCTGTATGCTTGGTCTAT+GGG | - | chr7_1:61635056-61635075 | None:intergenic | 45.0% | |
| GCCTGTGTGGTAAGGTTAAT+TGG | - | chr7_1:61635117-61635136 | None:intergenic | 45.0% | |
| !! | CACTGGCTTTCAATGATCCT+GGG | - | chr7_1:61635950-61635969 | None:intergenic | 45.0% |
| !! | TCACTGGCTTTCAATGATCC+TGG | - | chr7_1:61635951-61635970 | None:intergenic | 45.0% |
| GCAAAGAAGTCAGAGATGCT+TGG | - | chr7_1:61636149-61636168 | None:intergenic | 45.0% | |
| GCCTAGTTTGATCCACTATG+AGG | + | chr7_1:61636167-61636186 | Msa1028570:exon | 45.0% | |
| !! | GCCTCATAGTGGATCAAACT+AGG | - | chr7_1:61636171-61636190 | None:intergenic | 45.0% |
| !! | TTTAAAAAAAAAATGAAAAA+TGG | + | chr7_1:61631490-61631509 | Msa1028570:intron | 5.0% |
| !! | TTAAAAAAAAAATGAAAAAT+GGG | + | chr7_1:61631491-61631510 | Msa1028570:intron | 5.0% |
| !!! | AAATTTTCATTTTTTTATAT+TGG | - | chr7_1:61632810-61632829 | None:intergenic | 5.0% |
| !!! | AAAAAATGATTTTTTTTTTT+TGG | - | chr7_1:61633197-61633216 | None:intergenic | 5.0% |
| !!! | ATATATGTATTTTTAATTTT+GGG | - | chr7_1:61633692-61633711 | None:intergenic | 5.0% |
| !! | AATGTTATATAAAAATTAAT+TGG | - | chr7_1:61635145-61635164 | None:intergenic | 5.0% |
| GAAGTTCGGTCATGTGCATG+AGG | + | chr7_1:61630657-61630676 | Msa1028570:intron | 50.0% | |
| AGTTCGGTCATGTGCATGAG+GGG | + | chr7_1:61630659-61630678 | Msa1028570:intron | 50.0% | |
| GCATTCCATTCATAGGGCCA+AGG | - | chr7_1:61631004-61631023 | None:intergenic | 50.0% | |
| ! | CCCCTAAACACCCCTTTTCA+AGG | - | chr7_1:61631772-61631791 | None:intergenic | 50.0% |
| GGCGCGTTACATGATGTTTC+AGG | - | chr7_1:61631813-61631832 | None:intergenic | 50.0% | |
| ! | GGCCTTGGTAATCAGGCTTA+AGG | - | chr7_1:61632261-61632280 | None:intergenic | 50.0% |
| AACCGAGAGATTAGTGGCCT+TGG | - | chr7_1:61632276-61632295 | None:intergenic | 50.0% | |
| ATGTCCCGGGACACTAGTTA+AGG | - | chr7_1:61632993-61633012 | None:intergenic | 50.0% | |
| TAACTAGTGTCCCGGGACAT+TGG | + | chr7_1:61632993-61633012 | Msa1028570:intron | 50.0% | |
| !! | GTTTCGGAAGCATTAGCTCG+AGG | + | chr7_1:61633094-61633113 | Msa1028570:intron | 50.0% |
| TGAAGGTAACGTGCTAGTCC+AGG | - | chr7_1:61630193-61630212 | None:intergenic | 50.0% | |
| TGGGGAAATGCCTAAACCTG+AGG | + | chr7_1:61634106-61634125 | Msa1028570:CDS | 50.0% | |
| ! | TTGGTTGATGTTAGGTGGGG+TGG | - | chr7_1:61634992-61635011 | None:intergenic | 50.0% |
| GTATGCTTGGTCTATGGGTG+TGG | - | chr7_1:61635051-61635070 | None:intergenic | 50.0% | |
| CCTGCTGTATGCTTGGTCTA+TGG | - | chr7_1:61635057-61635076 | None:intergenic | 50.0% | |
| CCATAGACCAAGCATACAGC+AGG | + | chr7_1:61635054-61635073 | Msa1028570:intron | 50.0% | |
| TGGTGTTTGCCTGTGTGGTA+AGG | - | chr7_1:61635125-61635144 | None:intergenic | 50.0% | |
| ! | GTGATCTTGATTGGTCCGAG+TGG | + | chr7_1:61635251-61635270 | Msa1028570:intron | 50.0% |
| GCTTTCAATGATCCTGGGTC+TGG | - | chr7_1:61635945-61635964 | None:intergenic | 50.0% | |
| GTTCGGTCATGTGCATGAGG+GGG | + | chr7_1:61630660-61630679 | Msa1028570:intron | 55.0% | |
| TTCGGTCATGTGCATGAGGG+GGG | + | chr7_1:61630661-61630680 | Msa1028570:intron | 55.0% | |
| GCGGGAGAAGGCCATAGAAT+GGG | - | chr7_1:61631183-61631202 | None:intergenic | 55.0% | |
| ! | ATTTTACAGGGCGCGGGAGA+AGG | - | chr7_1:61631195-61631214 | None:intergenic | 55.0% |
| !! | AGGGGTGTTTAGGGGGTTTC+CGG | + | chr7_1:61631777-61631796 | Msa1028570:intron | 55.0% |
| TCAGGAACTGTACCAGACCC+AGG | + | chr7_1:61635930-61635949 | Msa1028570:CDS | 55.0% | |
| CGCGGGAGAAGGCCATAGAA+TGG | - | chr7_1:61631184-61631203 | None:intergenic | 60.0% | |
| CGTGGGATCCCATGGCTACA+AGG | - | chr7_1:61632746-61632765 | None:intergenic | 60.0% | |
| TGCGTGATCGTGGGATCCCA+TGG | - | chr7_1:61632754-61632773 | None:intergenic | 60.0% | |
| GTCATGTTAACCGGTGCCCC+CGG | + | chr7_1:61632855-61632874 | Msa1028570:intron | 60.0% | |
| TCATGTTAACCGGTGCCCCC+GGG | + | chr7_1:61632856-61632875 | Msa1028570:intron | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr7_1:61632874-61632893 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | - | chr7_1:61632875-61632894 | None:intergenic | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | - | chr7_1:61632876-61632895 | None:intergenic | 60.0% | |
| GGCTTCCTTAACCAGTGCCC+CGG | - | chr7_1:61632877-61632896 | None:intergenic | 60.0% | |
| !! | CACGCGCTTTGAGATCTGGG+TGG | - | chr7_1:61633899-61633918 | None:intergenic | 60.0% |
| CATGTTAACCGGTGCCCCCG+GGG | + | chr7_1:61632857-61632876 | Msa1028570:intron | 65.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr7_1:61632869-61632888 | Msa1028570:intron | 70.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | - | chr7_1:61632868-61632887 | None:intergenic | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | + | chr7_1:61632863-61632882 | Msa1028570:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 61630184 | 61636430 | 61630184 | ID=Msa1028570;Name=Msa1028570 |
| chr7_1 | mRNA | 61630184 | 61636430 | 61630184 | ID=Msa1028570-mRNA-1;Parent=Msa1028570;Name=Msa1028570-mRNA-1;_AED=0.26;_eAED=0.26;_QI=129|1|1|1|0.5|0.33|3|258|151 |
| chr7_1 | exon | 61630184 | 61630318 | 61630184 | ID=Msa1028570-mRNA-1:exon:12983;Parent=Msa1028570-mRNA-1 |
| chr7_1 | exon | 61634068 | 61634264 | 61634068 | ID=Msa1028570-mRNA-1:exon:12984;Parent=Msa1028570-mRNA-1 |
| chr7_1 | exon | 61635920 | 61636430 | 61635920 | ID=Msa1028570-mRNA-1:exon:12985;Parent=Msa1028570-mRNA-1 |
| chr7_1 | five_prime_UTR | 61630184 | 61630312 | 61630184 | ID=Msa1028570-mRNA-1:five_prime_utr;Parent=Msa1028570-mRNA-1 |
| chr7_1 | CDS | 61630313 | 61630318 | 61630313 | ID=Msa1028570-mRNA-1:cds;Parent=Msa1028570-mRNA-1 |
| chr7_1 | CDS | 61634068 | 61634264 | 61634068 | ID=Msa1028570-mRNA-1:cds;Parent=Msa1028570-mRNA-1 |
| chr7_1 | CDS | 61635920 | 61636172 | 61635920 | ID=Msa1028570-mRNA-1:cds;Parent=Msa1028570-mRNA-1 |
| chr7_1 | three_prime_UTR | 61636173 | 61636430 | 61636173 | ID=Msa1028570-mRNA-1:three_prime_utr;Parent=Msa1028570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
