Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028900 | XP_003624167.1 | 98.020 | 202 | 4 | 0 | 1 | 202 | 1 | 202 | 2.07e-145 | 412 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028900 | sp|Q681Z2|DSP3_ARATH | 67.005 | 197 | 64 | 1 | 3 | 198 | 1 | 197 | 1.57e-97 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028900 | Q2HVZ9 | 98.020 | 202 | 4 | 0 | 1 | 202 | 1 | 202 | 9.88e-146 | 412 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052780 | Msa1028900 | 0.810765 | 9.793250e-51 | -8.615850e-47 |
| Msa0097570 | Msa1028900 | 0.807511 | 4.878492e-50 | -8.615850e-47 |
| Msa0622440 | Msa1028900 | 0.899907 | 1.244459e-77 | -8.615850e-47 |
| Msa0697510 | Msa1028900 | 0.804260 | 2.352169e-49 | -8.615850e-47 |
| Msa1026970 | Msa1028900 | 0.807697 | 4.452816e-50 | -8.615850e-47 |
| Msa1028900 | Msa1111900 | 0.802011 | 6.868707e-49 | -8.615850e-47 |
| Msa1028900 | Msa1133760 | 0.803335 | 3.662314e-49 | -8.615850e-47 |
| Msa1028900 | Msa1173150 | 0.809972 | 1.452573e-50 | -8.615850e-47 |
| Msa0246140 | Msa1028900 | 0.812429 | 4.258726e-51 | -8.615850e-47 |
| Msa0560280 | Msa1028900 | 0.810005 | 1.429394e-50 | -8.615850e-47 |
| Msa0578460 | Msa1028900 | 0.813782 | 2.150376e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028900 | MtrunA17_Chr7g0249271 | 98.020 | 202 | 4 | 0 | 1 | 202 | 1 | 202 | 1.90e-149 | 412 |
| Msa1028900 | MtrunA17_Chr5g0438971 | 61.212 | 165 | 64 | 0 | 5 | 169 | 46 | 210 | 9.45e-75 | 224 |
| Msa1028900 | MtrunA17_Chr4g0075511 | 58.385 | 161 | 67 | 0 | 9 | 169 | 27 | 187 | 2.86e-69 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028900 | AT3G02800.1 | 67.005 | 197 | 64 | 1 | 3 | 198 | 1 | 197 | 1.59e-98 | 284 |
| Msa1028900 | AT5G16480.1 | 65.854 | 205 | 62 | 3 | 1 | 200 | 1 | 202 | 1.60e-95 | 276 |
| Msa1028900 | AT1G05000.1 | 65.359 | 153 | 49 | 2 | 17 | 167 | 53 | 203 | 1.10e-68 | 209 |
| Msa1028900 | AT4G03960.1 | 57.419 | 155 | 66 | 0 | 15 | 169 | 27 | 181 | 2.62e-63 | 195 |
| Msa1028900 | AT1G05000.2 | 53.514 | 185 | 54 | 2 | 17 | 169 | 53 | 237 | 7.86e-63 | 195 |
| Msa1028900 | AT2G32960.1 | 48.691 | 191 | 64 | 1 | 13 | 169 | 57 | 247 | 1.24e-61 | 192 |
| Msa1028900 | AT5G16480.2 | 70.238 | 84 | 22 | 1 | 1 | 84 | 1 | 81 | 5.48e-35 | 119 |
| Msa1028900 | AT1G05000.3 | 65.823 | 79 | 25 | 1 | 17 | 95 | 53 | 129 | 2.97e-28 | 104 |
Find 69 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGCAATGAACCAAAAT+AGG | 0.169489 | 7_1:-62098920 | None:intergenic |
| TGTGAGAAATCACCCTATTT+TGG | 0.209389 | 7_1:+62098907 | Msa1028900:CDS |
| CACATTCAATTGAATAATAA+TGG | 0.229943 | 7_1:+62097676 | Msa1028900:exon |
| ACCCTATCCCGAAGAGAATT+TGG | 0.260001 | 7_1:+62097952 | Msa1028900:CDS |
| AGAGAATTTGGAGTTCTTAA+AGG | 0.262009 | 7_1:+62097964 | Msa1028900:CDS |
| TCTTCAACCATGGAGAAATT+TGG | 0.290243 | 7_1:-62097755 | None:intergenic |
| TTCCAACTCCATTATTTGAT+TGG | 0.315457 | 7_1:+62099326 | Msa1028900:three_prime_UTR |
| CATAGGACAGGTTGCCTTGT+TGG | 0.318667 | 7_1:+62099061 | Msa1028900:CDS |
| TGCTCTGAAGGATTCTATTA+TGG | 0.330707 | 7_1:+62098737 | Msa1028900:CDS |
| AAGAACTCCAAATTCTCTTC+GGG | 0.335320 | 7_1:-62097959 | None:intergenic |
| TTCTCTTCGGGATAGGGTTC+AGG | 0.342295 | 7_1:-62097947 | None:intergenic |
| GCTTCAGAAAGTTGCAGAAT+TGG | 0.346755 | 7_1:+62099086 | Msa1028900:CDS |
| GAGGAGTATCAGCGATTTGC+TGG | 0.359295 | 7_1:+62099127 | Msa1028900:CDS |
| AATTCTACCCAATCAAATAA+TGG | 0.371844 | 7_1:-62099334 | None:intergenic |
| ACATTCAATTGAATAATAAT+GGG | 0.372293 | 7_1:+62097677 | Msa1028900:exon |
| GTTTGCAATGAACCAAAATA+GGG | 0.378578 | 7_1:-62098919 | None:intergenic |
| AAGGGAAAACTGGAAGGTTT+AGG | 0.384197 | 7_1:-62097800 | None:intergenic |
| TAAGAACTCCAAATTCTCTT+CGG | 0.390807 | 7_1:-62097960 | None:intergenic |
| GGTTTGAAGAAAGGGAAAAC+TGG | 0.396149 | 7_1:-62097810 | None:intergenic |
| TCCAAATTCTCTTCGGGATA+GGG | 0.404516 | 7_1:-62097953 | None:intergenic |
| TCCAACTCCATTATTTGATT+GGG | 0.415808 | 7_1:+62099327 | Msa1028900:three_prime_UTR |
| AAGGTTGAGGGTTTGAAGAA+AGG | 0.421342 | 7_1:-62097819 | None:intergenic |
| GTGTTTGTCTTCCGCGTTTG+AGG | 0.428171 | 7_1:+62099108 | Msa1028900:CDS |
| GATTTGCTGGTGTTAAATCC+AGG | 0.432715 | 7_1:+62099140 | Msa1028900:CDS |
| TATACTTCAAAGTAGTTGCT+TGG | 0.439756 | 7_1:+62099357 | Msa1028900:three_prime_UTR |
| AGGTTGAGGGTTTGAAGAAA+GGG | 0.440281 | 7_1:-62097818 | None:intergenic |
| GGTTTGACCTCGTAAGTCTT+AGG | 0.449851 | 7_1:+62099188 | Msa1028900:CDS |
| TGTAAACGAGGATTCGGATT+CGG | 0.454128 | 7_1:-62097634 | None:intergenic |
| GACTCTGTAAATTCTCATCT+TGG | 0.454525 | 7_1:-62099273 | None:intergenic |
| TGTGCGTGTAAACGAGGATT+CGG | 0.455840 | 7_1:-62097640 | None:intergenic |
| ATCTTTATGCAGCATAGGAC+AGG | 0.458017 | 7_1:+62099049 | Msa1028900:intron |
| CTCCAAATTCTCTTCGGGAT+AGG | 0.463257 | 7_1:-62097954 | None:intergenic |
| TGAGTTATGAGATTAATTGT+AGG | 0.467259 | 7_1:+62099511 | Msa1028900:three_prime_UTR |
| AAATGTTAAATCCGCTGCCC+TGG | 0.469169 | 7_1:-62099158 | None:intergenic |
| CATGATAGAGCGAAGGTTGA+GGG | 0.471110 | 7_1:-62097831 | None:intergenic |
| ATAAATGCAATCTTCAACCA+TGG | 0.485613 | 7_1:-62097765 | None:intergenic |
| TCTTTGAAGCACCTTGGTAC+TGG | 0.489070 | 7_1:-62099234 | None:intergenic |
| CAAATAATGGAGTTGGAACC+CGG | 0.489415 | 7_1:-62099321 | None:intergenic |
| ACCCAATCAAATAATGGAGT+TGG | 0.503021 | 7_1:-62099328 | None:intergenic |
| GCAGCTAAAATGATGTCAGC+CGG | 0.526267 | 7_1:-62099297 | None:intergenic |
| CGGATTTAACATTTATAGAG+AGG | 0.527211 | 7_1:+62099167 | Msa1028900:CDS |
| GGTTCATTGCAAACAAGGAA+AGG | 0.528428 | 7_1:+62098928 | Msa1028900:CDS |
| AGTTTCCTTACCTGCTCTGA+AGG | 0.529609 | 7_1:+62098725 | Msa1028900:CDS |
| AAAGATCTTTGAAAAGCCTA+AGG | 0.535376 | 7_1:-62099399 | None:intergenic |
| ACATGATAGAGCGAAGGTTG+AGG | 0.535379 | 7_1:-62097832 | None:intergenic |
| CAGCTAAAATGATGTCAGCC+GGG | 0.536546 | 7_1:-62099296 | None:intergenic |
| TCCTCCACCAAATTTCTCCA+TGG | 0.537020 | 7_1:+62097748 | Msa1028900:CDS |
| AGAATCCTTCAGAGCAGGTA+AGG | 0.540312 | 7_1:-62098730 | None:intergenic |
| TCAACCATGGAGAAATTTGG+TGG | 0.540768 | 7_1:-62097752 | None:intergenic |
| ATAATAGAATCCTTCAGAGC+AGG | 0.543012 | 7_1:-62098735 | None:intergenic |
| ATTTGGAATCGAGGGCAAAA+CGG | 0.561591 | 7_1:+62098009 | Msa1028900:CDS |
| ATGAGAATTTACAGAGTCCC+CGG | 0.562012 | 7_1:+62099278 | Msa1028900:CDS |
| TGCGCTTCTTTGAAGCACCT+TGG | 0.567421 | 7_1:-62099240 | None:intergenic |
| TGAAGAAAGGGAAAACTGGA+AGG | 0.573241 | 7_1:-62097806 | None:intergenic |
| GACTGAACATTATTATCCTT+AGG | 0.581387 | 7_1:+62099383 | Msa1028900:three_prime_UTR |
| TGGTGTTAAATCCAGGGCAG+CGG | 0.584305 | 7_1:+62099147 | Msa1028900:CDS |
| ATTTGCTGGTGTTAAATCCA+GGG | 0.594403 | 7_1:+62099141 | Msa1028900:CDS |
| ACCATGGAGAAATTTGGTGG+AGG | 0.596016 | 7_1:-62097749 | None:intergenic |
| ACTTTCTGAAGCAGCCAACA+AGG | 0.599002 | 7_1:-62099075 | None:intergenic |
| TCTGAAGGATTCTATTATGG+AGG | 0.606423 | 7_1:+62098740 | Msa1028900:CDS |
| AAGGTGCTTCAAAGAAGCGC+AGG | 0.614369 | 7_1:+62099242 | Msa1028900:CDS |
| AAACTAACATGATAGAGCGA+AGG | 0.636224 | 7_1:-62097838 | None:intergenic |
| CATTCAATTGAATAATAATG+GGG | 0.641084 | 7_1:+62097678 | Msa1028900:exon |
| AACATCTCACACAGATACAG+TGG | 0.671663 | 7_1:+62099457 | Msa1028900:three_prime_UTR |
| AGCTAAAATGATGTCAGCCG+GGG | 0.678842 | 7_1:-62099295 | None:intergenic |
| AGCATCATCTACCAGTACCA+AGG | 0.693429 | 7_1:+62099223 | Msa1028900:CDS |
| TGTTTGTGTGCGTGTAAACG+AGG | 0.696253 | 7_1:-62097646 | None:intergenic |
| GACACTGCCTAAGACTTACG+AGG | 0.727290 | 7_1:-62099195 | None:intergenic |
| TCGCTGATACTCCTCAAACG+CGG | 0.736711 | 7_1:-62099119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAACATAAAATTAGA+AGG | - | chr7_1:62098995-62099014 | None:intergenic | 10.0% |
| !! | TATAAAAACATAAAATTAGA+AGG | - | chr7_1:62098995-62099014 | None:intergenic | 10.0% |
| !! | ACATTCAATTGAATAATAAT+GGG | + | chr7_1:62097677-62097696 | Msa1028900:exon | 15.0% |
| !! | CATTAGAATTATAGAATTAT+AGG | - | chr7_1:62099019-62099038 | None:intergenic | 15.0% |
| !!! | ACATATATTTTTTTATTCAG+CGG | + | chr7_1:62099487-62099506 | Msa1028900:three_prime_UTR | 15.0% |
| !! | ACATTCAATTGAATAATAAT+GGG | + | chr7_1:62097677-62097696 | Msa1028900:exon | 15.0% |
| !! | CATTAGAATTATAGAATTAT+AGG | - | chr7_1:62099019-62099038 | None:intergenic | 15.0% |
| !!! | ACATATATTTTTTTATTCAG+CGG | + | chr7_1:62099487-62099506 | Msa1028900:three_prime_UTR | 15.0% |
| !! | CACATTCAATTGAATAATAA+TGG | + | chr7_1:62097676-62097695 | Msa1028900:exon | 20.0% |
| !! | CATTCAATTGAATAATAATG+GGG | + | chr7_1:62097678-62097697 | Msa1028900:exon | 20.0% |
| !!! | AATATTCGTCTTTTTCAATT+TGG | + | chr7_1:62097992-62098011 | Msa1028900:CDS | 20.0% |
| !!! | TGTTTGTAACTTTATTCTTT+TGG | + | chr7_1:62098200-62098219 | Msa1028900:intron | 20.0% |
| !! | TTTGAAGGAAATTAGATTAT+GGG | + | chr7_1:62098324-62098343 | Msa1028900:intron | 20.0% |
| !! | AGTTTATCATAAATATGAGT+TGG | + | chr7_1:62098574-62098593 | Msa1028900:intron | 20.0% |
| !! | CACATTCAATTGAATAATAA+TGG | + | chr7_1:62097676-62097695 | Msa1028900:exon | 20.0% |
| !! | CATTCAATTGAATAATAATG+GGG | + | chr7_1:62097678-62097697 | Msa1028900:exon | 20.0% |
| !!! | AATATTCGTCTTTTTCAATT+TGG | + | chr7_1:62097992-62098011 | Msa1028900:CDS | 20.0% |
| !!! | TGTTTGTAACTTTATTCTTT+TGG | + | chr7_1:62098200-62098219 | Msa1028900:intron | 20.0% |
| !! | TTTGAAGGAAATTAGATTAT+GGG | + | chr7_1:62098324-62098343 | Msa1028900:intron | 20.0% |
| !! | AGTTTATCATAAATATGAGT+TGG | + | chr7_1:62098574-62098593 | Msa1028900:intron | 20.0% |
| ! | AAAAAAAAACGGTTCTTGAA+AGG | - | chr7_1:62097872-62097891 | None:intergenic | 25.0% |
| !! | TGCTATTTGAATGTTGTTTA+AGG | + | chr7_1:62098076-62098095 | Msa1028900:intron | 25.0% |
| ! | GGTTTGTGATTAATTGAAAT+AGG | + | chr7_1:62098097-62098116 | Msa1028900:intron | 25.0% |
| !!! | AACTTTATTCTTTTGGTGAT+TGG | + | chr7_1:62098207-62098226 | Msa1028900:intron | 25.0% |
| ! | TTATGTGATTGTTTGTTTGA+AGG | + | chr7_1:62098309-62098328 | Msa1028900:intron | 25.0% |
| ! | GTTTGAAGGAAATTAGATTA+TGG | + | chr7_1:62098323-62098342 | Msa1028900:intron | 25.0% |
| ! | TTAGATTATGGGTTTATGTT+TGG | + | chr7_1:62098335-62098354 | Msa1028900:intron | 25.0% |
| !! | GTTTCTATTTTCTTAACTAG+TGG | + | chr7_1:62098505-62098524 | Msa1028900:intron | 25.0% |
| ! | TTTAGTTATTGTCATGTTTG+TGG | + | chr7_1:62098598-62098617 | Msa1028900:intron | 25.0% |
| ! | TTGCAAATTTATCATCTCAT+TGG | + | chr7_1:62098962-62098981 | Msa1028900:intron | 25.0% |
| ! | AATTCTACCCAATCAAATAA+TGG | - | chr7_1:62099337-62099356 | None:intergenic | 25.0% |
| ! | TGAGTTATGAGATTAATTGT+AGG | + | chr7_1:62099511-62099530 | Msa1028900:three_prime_UTR | 25.0% |
| ! | AAAAAAAAACGGTTCTTGAA+AGG | - | chr7_1:62097872-62097891 | None:intergenic | 25.0% |
| !! | TGCTATTTGAATGTTGTTTA+AGG | + | chr7_1:62098076-62098095 | Msa1028900:intron | 25.0% |
| ! | GGTTTGTGATTAATTGAAAT+AGG | + | chr7_1:62098097-62098116 | Msa1028900:intron | 25.0% |
| !!! | AACTTTATTCTTTTGGTGAT+TGG | + | chr7_1:62098207-62098226 | Msa1028900:intron | 25.0% |
| ! | TTATGTGATTGTTTGTTTGA+AGG | + | chr7_1:62098309-62098328 | Msa1028900:intron | 25.0% |
| ! | GTTTGAAGGAAATTAGATTA+TGG | + | chr7_1:62098323-62098342 | Msa1028900:intron | 25.0% |
| ! | TTAGATTATGGGTTTATGTT+TGG | + | chr7_1:62098335-62098354 | Msa1028900:intron | 25.0% |
| !! | GTTTCTATTTTCTTAACTAG+TGG | + | chr7_1:62098505-62098524 | Msa1028900:intron | 25.0% |
| ! | TTTAGTTATTGTCATGTTTG+TGG | + | chr7_1:62098598-62098617 | Msa1028900:intron | 25.0% |
| ! | TTGCAAATTTATCATCTCAT+TGG | + | chr7_1:62098962-62098981 | Msa1028900:intron | 25.0% |
| ! | AATTCTACCCAATCAAATAA+TGG | - | chr7_1:62099337-62099356 | None:intergenic | 25.0% |
| ! | TGAGTTATGAGATTAATTGT+AGG | + | chr7_1:62099511-62099530 | Msa1028900:three_prime_UTR | 25.0% |
| ATAAATGCAATCTTCAACCA+TGG | - | chr7_1:62097768-62097787 | None:intergenic | 30.0% | |
| TAAGAACTCCAAATTCTCTT+CGG | - | chr7_1:62097963-62097982 | None:intergenic | 30.0% | |
| ! | AGAGAATTTGGAGTTCTTAA+AGG | + | chr7_1:62097964-62097983 | Msa1028900:CDS | 30.0% |
| !!! | TCTTTTTCAATTTGGAATCG+AGG | + | chr7_1:62098000-62098019 | Msa1028900:CDS | 30.0% |
| !!! | CTTTTTCAATTTGGAATCGA+GGG | + | chr7_1:62098001-62098020 | Msa1028900:CDS | 30.0% |
| ATTATGGGTTTATGTTTGGT+TGG | + | chr7_1:62098339-62098358 | Msa1028900:intron | 30.0% | |
| ! | TTATGTTTGGTTGGCTATTT+AGG | + | chr7_1:62098348-62098367 | Msa1028900:intron | 30.0% |
| ! | TATGTTTGGTTGGCTATTTA+GGG | + | chr7_1:62098349-62098368 | Msa1028900:intron | 30.0% |
| ! | ATCTCGAAATTTTCATGAAG+TGG | + | chr7_1:62098425-62098444 | Msa1028900:intron | 30.0% |
| ! | ATTATGAAGTTTGAAGCATG+TGG | + | chr7_1:62098624-62098643 | Msa1028900:intron | 30.0% |
| GTCAATAACTCCAATAACAA+AGG | - | chr7_1:62098678-62098697 | None:intergenic | 30.0% | |
| ! | TCTGAAAGCACACATAATTA+AGG | - | chr7_1:62098887-62098906 | None:intergenic | 30.0% |
| GTTTGCAATGAACCAAAATA+GGG | - | chr7_1:62098922-62098941 | None:intergenic | 30.0% | |
| TGTTTGCAATGAACCAAAAT+AGG | - | chr7_1:62098923-62098942 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTCATTGCAAACA+AGG | + | chr7_1:62098923-62098942 | Msa1028900:CDS | 30.0% |
| ! | TTTTCATCTTTATGCAGCAT+AGG | + | chr7_1:62099044-62099063 | Msa1028900:intron | 30.0% |
| CGGATTTAACATTTATAGAG+AGG | + | chr7_1:62099167-62099186 | Msa1028900:CDS | 30.0% | |
| TTCCAACTCCATTATTTGAT+TGG | + | chr7_1:62099326-62099345 | Msa1028900:three_prime_UTR | 30.0% | |
| TCCAACTCCATTATTTGATT+GGG | + | chr7_1:62099327-62099346 | Msa1028900:three_prime_UTR | 30.0% | |
| TATACTTCAAAGTAGTTGCT+TGG | + | chr7_1:62099357-62099376 | Msa1028900:three_prime_UTR | 30.0% | |
| GACTGAACATTATTATCCTT+AGG | + | chr7_1:62099383-62099402 | Msa1028900:three_prime_UTR | 30.0% | |
| ! | AAAGATCTTTGAAAAGCCTA+AGG | - | chr7_1:62099402-62099421 | None:intergenic | 30.0% |
| ATAAATGCAATCTTCAACCA+TGG | - | chr7_1:62097768-62097787 | None:intergenic | 30.0% | |
| TAAGAACTCCAAATTCTCTT+CGG | - | chr7_1:62097963-62097982 | None:intergenic | 30.0% | |
| ! | AGAGAATTTGGAGTTCTTAA+AGG | + | chr7_1:62097964-62097983 | Msa1028900:CDS | 30.0% |
| !!! | TCTTTTTCAATTTGGAATCG+AGG | + | chr7_1:62098000-62098019 | Msa1028900:CDS | 30.0% |
| !!! | CTTTTTCAATTTGGAATCGA+GGG | + | chr7_1:62098001-62098020 | Msa1028900:CDS | 30.0% |
| ATTATGGGTTTATGTTTGGT+TGG | + | chr7_1:62098339-62098358 | Msa1028900:intron | 30.0% | |
| ! | TTATGTTTGGTTGGCTATTT+AGG | + | chr7_1:62098348-62098367 | Msa1028900:intron | 30.0% |
| ! | TATGTTTGGTTGGCTATTTA+GGG | + | chr7_1:62098349-62098368 | Msa1028900:intron | 30.0% |
| ! | ATCTCGAAATTTTCATGAAG+TGG | + | chr7_1:62098425-62098444 | Msa1028900:intron | 30.0% |
| ! | ATTATGAAGTTTGAAGCATG+TGG | + | chr7_1:62098624-62098643 | Msa1028900:intron | 30.0% |
| GTCAATAACTCCAATAACAA+AGG | - | chr7_1:62098678-62098697 | None:intergenic | 30.0% | |
| ! | TCTGAAAGCACACATAATTA+AGG | - | chr7_1:62098887-62098906 | None:intergenic | 30.0% |
| GTTTGCAATGAACCAAAATA+GGG | - | chr7_1:62098922-62098941 | None:intergenic | 30.0% | |
| TGTTTGCAATGAACCAAAAT+AGG | - | chr7_1:62098923-62098942 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTCATTGCAAACA+AGG | + | chr7_1:62098923-62098942 | Msa1028900:CDS | 30.0% |
| ! | TTTTCATCTTTATGCAGCAT+AGG | + | chr7_1:62099044-62099063 | Msa1028900:intron | 30.0% |
| CGGATTTAACATTTATAGAG+AGG | + | chr7_1:62099167-62099186 | Msa1028900:CDS | 30.0% | |
| TTCCAACTCCATTATTTGAT+TGG | + | chr7_1:62099326-62099345 | Msa1028900:three_prime_UTR | 30.0% | |
| TCCAACTCCATTATTTGATT+GGG | + | chr7_1:62099327-62099346 | Msa1028900:three_prime_UTR | 30.0% | |
| TATACTTCAAAGTAGTTGCT+TGG | + | chr7_1:62099357-62099376 | Msa1028900:three_prime_UTR | 30.0% | |
| GACTGAACATTATTATCCTT+AGG | + | chr7_1:62099383-62099402 | Msa1028900:three_prime_UTR | 30.0% | |
| ! | AAAGATCTTTGAAAAGCCTA+AGG | - | chr7_1:62099402-62099421 | None:intergenic | 30.0% |
| TCTTCAACCATGGAGAAATT+TGG | - | chr7_1:62097758-62097777 | None:intergenic | 35.0% | |
| AAACTAACATGATAGAGCGA+AGG | - | chr7_1:62097841-62097860 | None:intergenic | 35.0% | |
| AAGAACTCCAAATTCTCTTC+GGG | - | chr7_1:62097962-62097981 | None:intergenic | 35.0% | |
| ! | AATGCTAAAAAGTGTGTCTG+AGG | + | chr7_1:62098384-62098403 | Msa1028900:intron | 35.0% |
| TTTCATGAAGTGGTGAAAAG+TGG | + | chr7_1:62098435-62098454 | Msa1028900:intron | 35.0% | |
| ! | ATTTTCTTAACTAGTGGCCA+TGG | + | chr7_1:62098511-62098530 | Msa1028900:intron | 35.0% |
| AGTTATTGTCATGTTTGTGG+AGG | + | chr7_1:62098601-62098620 | Msa1028900:intron | 35.0% | |
| CAAAGGGCAAATAACACATA+GGG | - | chr7_1:62098700-62098719 | None:intergenic | 35.0% | |
| ATAATAGAATCCTTCAGAGC+AGG | - | chr7_1:62098738-62098757 | None:intergenic | 35.0% | |
| !! | TGCTCTGAAGGATTCTATTA+TGG | + | chr7_1:62098737-62098756 | Msa1028900:CDS | 35.0% |
| TCTGAAGGATTCTATTATGG+AGG | + | chr7_1:62098740-62098759 | Msa1028900:CDS | 35.0% | |
| !!! | GAGGCTTTGAAAGTTTTAGT+TGG | + | chr7_1:62098759-62098778 | Msa1028900:CDS | 35.0% |
| ! | TGTGAGAAATCACCCTATTT+TGG | + | chr7_1:62098907-62098926 | Msa1028900:CDS | 35.0% |
| ! | ATTTGCTGGTGTTAAATCCA+GGG | + | chr7_1:62099141-62099160 | Msa1028900:CDS | 35.0% |
| GACTCTGTAAATTCTCATCT+TGG | - | chr7_1:62099276-62099295 | None:intergenic | 35.0% | |
| ! | ACCCAATCAAATAATGGAGT+TGG | - | chr7_1:62099331-62099350 | None:intergenic | 35.0% |
| TCTTCAACCATGGAGAAATT+TGG | - | chr7_1:62097758-62097777 | None:intergenic | 35.0% | |
| AAACTAACATGATAGAGCGA+AGG | - | chr7_1:62097841-62097860 | None:intergenic | 35.0% | |
| AAGAACTCCAAATTCTCTTC+GGG | - | chr7_1:62097962-62097981 | None:intergenic | 35.0% | |
| ! | AATGCTAAAAAGTGTGTCTG+AGG | + | chr7_1:62098384-62098403 | Msa1028900:intron | 35.0% |
| TTTCATGAAGTGGTGAAAAG+TGG | + | chr7_1:62098435-62098454 | Msa1028900:intron | 35.0% | |
| ! | ATTTTCTTAACTAGTGGCCA+TGG | + | chr7_1:62098511-62098530 | Msa1028900:intron | 35.0% |
| AGTTATTGTCATGTTTGTGG+AGG | + | chr7_1:62098601-62098620 | Msa1028900:intron | 35.0% | |
| CAAAGGGCAAATAACACATA+GGG | - | chr7_1:62098700-62098719 | None:intergenic | 35.0% | |
| ATAATAGAATCCTTCAGAGC+AGG | - | chr7_1:62098738-62098757 | None:intergenic | 35.0% | |
| !! | TGCTCTGAAGGATTCTATTA+TGG | + | chr7_1:62098737-62098756 | Msa1028900:CDS | 35.0% |
| TCTGAAGGATTCTATTATGG+AGG | + | chr7_1:62098740-62098759 | Msa1028900:CDS | 35.0% | |
| !!! | GAGGCTTTGAAAGTTTTAGT+TGG | + | chr7_1:62098759-62098778 | Msa1028900:CDS | 35.0% |
| ! | TGTGAGAAATCACCCTATTT+TGG | + | chr7_1:62098907-62098926 | Msa1028900:CDS | 35.0% |
| ! | ATTTGCTGGTGTTAAATCCA+GGG | + | chr7_1:62099141-62099160 | Msa1028900:CDS | 35.0% |
| GACTCTGTAAATTCTCATCT+TGG | - | chr7_1:62099276-62099295 | None:intergenic | 35.0% | |
| ! | ACCCAATCAAATAATGGAGT+TGG | - | chr7_1:62099331-62099350 | None:intergenic | 35.0% |
| TGTAAACGAGGATTCGGATT+CGG | - | chr7_1:62097637-62097656 | None:intergenic | 40.0% | |
| TCAACCATGGAGAAATTTGG+TGG | - | chr7_1:62097755-62097774 | None:intergenic | 40.0% | |
| AAGGGAAAACTGGAAGGTTT+AGG | - | chr7_1:62097803-62097822 | None:intergenic | 40.0% | |
| TGAAGAAAGGGAAAACTGGA+AGG | - | chr7_1:62097809-62097828 | None:intergenic | 40.0% | |
| GGTTTGAAGAAAGGGAAAAC+TGG | - | chr7_1:62097813-62097832 | None:intergenic | 40.0% | |
| AGGTTGAGGGTTTGAAGAAA+GGG | - | chr7_1:62097821-62097840 | None:intergenic | 40.0% | |
| AAGGTTGAGGGTTTGAAGAA+AGG | - | chr7_1:62097822-62097841 | None:intergenic | 40.0% | |
| TCCAAATTCTCTTCGGGATA+GGG | - | chr7_1:62097956-62097975 | None:intergenic | 40.0% | |
| ! | ATTTGGAATCGAGGGCAAAA+CGG | + | chr7_1:62098009-62098028 | Msa1028900:CDS | 40.0% |
| !! | TTGGTCTTTTACCTTTGTGC+TGG | + | chr7_1:62098226-62098245 | Msa1028900:intron | 40.0% |
| CCTTAAAAAGTCCAGCACAA+AGG | - | chr7_1:62098240-62098259 | None:intergenic | 40.0% | |
| ! | CCTTTGTGCTGGACTTTTTA+AGG | + | chr7_1:62098237-62098256 | Msa1028900:intron | 40.0% |
| ! | TTGGTTGGCTATTTAGGGTT+CGG | + | chr7_1:62098354-62098373 | Msa1028900:intron | 40.0% |
| AATTTCCCTTTCCTTTACCG+AGG | - | chr7_1:62098551-62098570 | None:intergenic | 40.0% | |
| CGGTAAAGGAAAGGGAAATT+TGG | + | chr7_1:62098551-62098570 | Msa1028900:intron | 40.0% | |
| ! | GTTTCGTCTGCCTTTGTTAT+TGG | + | chr7_1:62098665-62098684 | Msa1028900:intron | 40.0% |
| GCAAAGGGCAAATAACACAT+AGG | - | chr7_1:62098701-62098720 | None:intergenic | 40.0% | |
| !! | ATGTGTTATTTGCCCTTTGC+AGG | + | chr7_1:62098701-62098720 | Msa1028900:intron | 40.0% |
| GTAAGGAAACTTCCTGCAAA+GGG | - | chr7_1:62098716-62098735 | None:intergenic | 40.0% | |
| GGTTCATTGCAAACAAGGAA+AGG | + | chr7_1:62098928-62098947 | Msa1028900:CDS | 40.0% | |
| ATCTTTATGCAGCATAGGAC+AGG | + | chr7_1:62099049-62099068 | Msa1028900:intron | 40.0% | |
| GCTTCAGAAAGTTGCAGAAT+TGG | + | chr7_1:62099086-62099105 | Msa1028900:CDS | 40.0% | |
| !! | GATTTGCTGGTGTTAAATCC+AGG | + | chr7_1:62099140-62099159 | Msa1028900:CDS | 40.0% |
| ATGAGAATTTACAGAGTCCC+CGG | + | chr7_1:62099278-62099297 | Msa1028900:CDS | 40.0% | |
| !!! | TGACATCATTTTAGCTGCAC+CGG | + | chr7_1:62099302-62099321 | Msa1028900:exon | 40.0% |
| ! | CAAATAATGGAGTTGGAACC+CGG | - | chr7_1:62099324-62099343 | None:intergenic | 40.0% |
| AACATCTCACACAGATACAG+TGG | + | chr7_1:62099457-62099476 | Msa1028900:three_prime_UTR | 40.0% | |
| TGTAAACGAGGATTCGGATT+CGG | - | chr7_1:62097637-62097656 | None:intergenic | 40.0% | |
| TCAACCATGGAGAAATTTGG+TGG | - | chr7_1:62097755-62097774 | None:intergenic | 40.0% | |
| AAGGGAAAACTGGAAGGTTT+AGG | - | chr7_1:62097803-62097822 | None:intergenic | 40.0% | |
| TGAAGAAAGGGAAAACTGGA+AGG | - | chr7_1:62097809-62097828 | None:intergenic | 40.0% | |
| GGTTTGAAGAAAGGGAAAAC+TGG | - | chr7_1:62097813-62097832 | None:intergenic | 40.0% | |
| AGGTTGAGGGTTTGAAGAAA+GGG | - | chr7_1:62097821-62097840 | None:intergenic | 40.0% | |
| AAGGTTGAGGGTTTGAAGAA+AGG | - | chr7_1:62097822-62097841 | None:intergenic | 40.0% | |
| TCCAAATTCTCTTCGGGATA+GGG | - | chr7_1:62097956-62097975 | None:intergenic | 40.0% | |
| ! | ATTTGGAATCGAGGGCAAAA+CGG | + | chr7_1:62098009-62098028 | Msa1028900:CDS | 40.0% |
| !! | TTGGTCTTTTACCTTTGTGC+TGG | + | chr7_1:62098226-62098245 | Msa1028900:intron | 40.0% |
| CCTTAAAAAGTCCAGCACAA+AGG | - | chr7_1:62098240-62098259 | None:intergenic | 40.0% | |
| ! | CCTTTGTGCTGGACTTTTTA+AGG | + | chr7_1:62098237-62098256 | Msa1028900:intron | 40.0% |
| ! | TTGGTTGGCTATTTAGGGTT+CGG | + | chr7_1:62098354-62098373 | Msa1028900:intron | 40.0% |
| AATTTCCCTTTCCTTTACCG+AGG | - | chr7_1:62098551-62098570 | None:intergenic | 40.0% | |
| CGGTAAAGGAAAGGGAAATT+TGG | + | chr7_1:62098551-62098570 | Msa1028900:intron | 40.0% | |
| ! | GTTTCGTCTGCCTTTGTTAT+TGG | + | chr7_1:62098665-62098684 | Msa1028900:intron | 40.0% |
| GCAAAGGGCAAATAACACAT+AGG | - | chr7_1:62098701-62098720 | None:intergenic | 40.0% | |
| !! | ATGTGTTATTTGCCCTTTGC+AGG | + | chr7_1:62098701-62098720 | Msa1028900:intron | 40.0% |
| GTAAGGAAACTTCCTGCAAA+GGG | - | chr7_1:62098716-62098735 | None:intergenic | 40.0% | |
| GGTTCATTGCAAACAAGGAA+AGG | + | chr7_1:62098928-62098947 | Msa1028900:CDS | 40.0% | |
| ATCTTTATGCAGCATAGGAC+AGG | + | chr7_1:62099049-62099068 | Msa1028900:intron | 40.0% | |
| GCTTCAGAAAGTTGCAGAAT+TGG | + | chr7_1:62099086-62099105 | Msa1028900:CDS | 40.0% | |
| !! | GATTTGCTGGTGTTAAATCC+AGG | + | chr7_1:62099140-62099159 | Msa1028900:CDS | 40.0% |
| ATGAGAATTTACAGAGTCCC+CGG | + | chr7_1:62099278-62099297 | Msa1028900:CDS | 40.0% | |
| !!! | TGACATCATTTTAGCTGCAC+CGG | + | chr7_1:62099302-62099321 | Msa1028900:exon | 40.0% |
| ! | CAAATAATGGAGTTGGAACC+CGG | - | chr7_1:62099324-62099343 | None:intergenic | 40.0% |
| AACATCTCACACAGATACAG+TGG | + | chr7_1:62099457-62099476 | Msa1028900:three_prime_UTR | 40.0% | |
| TGTGCGTGTAAACGAGGATT+CGG | - | chr7_1:62097643-62097662 | None:intergenic | 45.0% | |
| TGTTTGTGTGCGTGTAAACG+AGG | - | chr7_1:62097649-62097668 | None:intergenic | 45.0% | |
| TCCTCCACCAAATTTCTCCA+TGG | + | chr7_1:62097748-62097767 | Msa1028900:CDS | 45.0% | |
| ! | ACCATGGAGAAATTTGGTGG+AGG | - | chr7_1:62097752-62097771 | None:intergenic | 45.0% |
| CATGATAGAGCGAAGGTTGA+GGG | - | chr7_1:62097834-62097853 | None:intergenic | 45.0% | |
| ACATGATAGAGCGAAGGTTG+AGG | - | chr7_1:62097835-62097854 | None:intergenic | 45.0% | |
| ACCCTATCCCGAAGAGAATT+TGG | + | chr7_1:62097952-62097971 | Msa1028900:CDS | 45.0% | |
| CTCCAAATTCTCTTCGGGAT+AGG | - | chr7_1:62097957-62097976 | None:intergenic | 45.0% | |
| ! | TGGTTGGCTATTTAGGGTTC+GGG | + | chr7_1:62098355-62098374 | Msa1028900:intron | 45.0% |
| ! | AGGCATGCTAACTTGTACCA+TGG | - | chr7_1:62098531-62098550 | None:intergenic | 45.0% |
| TGGTACAAGTTAGCATGCCT+CGG | + | chr7_1:62098531-62098550 | Msa1028900:intron | 45.0% | |
| AAGTTAGCATGCCTCGGTAA+AGG | + | chr7_1:62098537-62098556 | Msa1028900:intron | 45.0% | |
| ! | GTGGATTCTTGACCGAGTTT+TGG | + | chr7_1:62098643-62098662 | Msa1028900:intron | 45.0% |
| AGGCAGACGAAACCAAAACT+CGG | - | chr7_1:62098658-62098677 | None:intergenic | 45.0% | |
| GGTAAGGAAACTTCCTGCAA+AGG | - | chr7_1:62098717-62098736 | None:intergenic | 45.0% | |
| AGTTTCCTTACCTGCTCTGA+AGG | + | chr7_1:62098725-62098744 | Msa1028900:CDS | 45.0% | |
| AGAATCCTTCAGAGCAGGTA+AGG | - | chr7_1:62098733-62098752 | None:intergenic | 45.0% | |
| !! | ACTTTCTGAAGCAGCCAACA+AGG | - | chr7_1:62099078-62099097 | None:intergenic | 45.0% |
| AAATGTTAAATCCGCTGCCC+TGG | - | chr7_1:62099161-62099180 | None:intergenic | 45.0% | |
| GGTTTGACCTCGTAAGTCTT+AGG | + | chr7_1:62099188-62099207 | Msa1028900:CDS | 45.0% | |
| AGCATCATCTACCAGTACCA+AGG | + | chr7_1:62099223-62099242 | Msa1028900:CDS | 45.0% | |
| !! | TCTTTGAAGCACCTTGGTAC+TGG | - | chr7_1:62099237-62099256 | None:intergenic | 45.0% |
| AGCTAAAATGATGTCAGCCG+GGG | - | chr7_1:62099298-62099317 | None:intergenic | 45.0% | |
| CAGCTAAAATGATGTCAGCC+GGG | - | chr7_1:62099299-62099318 | None:intergenic | 45.0% | |
| GCAGCTAAAATGATGTCAGC+CGG | - | chr7_1:62099300-62099319 | None:intergenic | 45.0% | |
| !!! | GACATCATTTTAGCTGCACC+GGG | + | chr7_1:62099303-62099322 | Msa1028900:exon | 45.0% |
| TGTGCGTGTAAACGAGGATT+CGG | - | chr7_1:62097643-62097662 | None:intergenic | 45.0% | |
| TGTTTGTGTGCGTGTAAACG+AGG | - | chr7_1:62097649-62097668 | None:intergenic | 45.0% | |
| TCCTCCACCAAATTTCTCCA+TGG | + | chr7_1:62097748-62097767 | Msa1028900:CDS | 45.0% | |
| ! | ACCATGGAGAAATTTGGTGG+AGG | - | chr7_1:62097752-62097771 | None:intergenic | 45.0% |
| CATGATAGAGCGAAGGTTGA+GGG | - | chr7_1:62097834-62097853 | None:intergenic | 45.0% | |
| ACATGATAGAGCGAAGGTTG+AGG | - | chr7_1:62097835-62097854 | None:intergenic | 45.0% | |
| ACCCTATCCCGAAGAGAATT+TGG | + | chr7_1:62097952-62097971 | Msa1028900:CDS | 45.0% | |
| CTCCAAATTCTCTTCGGGAT+AGG | - | chr7_1:62097957-62097976 | None:intergenic | 45.0% | |
| ! | TGGTTGGCTATTTAGGGTTC+GGG | + | chr7_1:62098355-62098374 | Msa1028900:intron | 45.0% |
| ! | AGGCATGCTAACTTGTACCA+TGG | - | chr7_1:62098531-62098550 | None:intergenic | 45.0% |
| TGGTACAAGTTAGCATGCCT+CGG | + | chr7_1:62098531-62098550 | Msa1028900:intron | 45.0% | |
| AAGTTAGCATGCCTCGGTAA+AGG | + | chr7_1:62098537-62098556 | Msa1028900:intron | 45.0% | |
| ! | GTGGATTCTTGACCGAGTTT+TGG | + | chr7_1:62098643-62098662 | Msa1028900:intron | 45.0% |
| AGGCAGACGAAACCAAAACT+CGG | - | chr7_1:62098658-62098677 | None:intergenic | 45.0% | |
| GGTAAGGAAACTTCCTGCAA+AGG | - | chr7_1:62098717-62098736 | None:intergenic | 45.0% | |
| AGTTTCCTTACCTGCTCTGA+AGG | + | chr7_1:62098725-62098744 | Msa1028900:CDS | 45.0% | |
| AGAATCCTTCAGAGCAGGTA+AGG | - | chr7_1:62098733-62098752 | None:intergenic | 45.0% | |
| !! | ACTTTCTGAAGCAGCCAACA+AGG | - | chr7_1:62099078-62099097 | None:intergenic | 45.0% |
| AAATGTTAAATCCGCTGCCC+TGG | - | chr7_1:62099161-62099180 | None:intergenic | 45.0% | |
| GGTTTGACCTCGTAAGTCTT+AGG | + | chr7_1:62099188-62099207 | Msa1028900:CDS | 45.0% | |
| AGCATCATCTACCAGTACCA+AGG | + | chr7_1:62099223-62099242 | Msa1028900:CDS | 45.0% | |
| !! | TCTTTGAAGCACCTTGGTAC+TGG | - | chr7_1:62099237-62099256 | None:intergenic | 45.0% |
| AGCTAAAATGATGTCAGCCG+GGG | - | chr7_1:62099298-62099317 | None:intergenic | 45.0% | |
| CAGCTAAAATGATGTCAGCC+GGG | - | chr7_1:62099299-62099318 | None:intergenic | 45.0% | |
| GCAGCTAAAATGATGTCAGC+CGG | - | chr7_1:62099300-62099319 | None:intergenic | 45.0% | |
| !!! | GACATCATTTTAGCTGCACC+GGG | + | chr7_1:62099303-62099322 | Msa1028900:exon | 45.0% |
| !! | AATAATAAACAAAAAAAAAA+CGG | - | chr7_1:62097883-62097902 | None:intergenic | 5.0% |
| !!! | TTTATATATTTTTTTAAGTT+TGG | + | chr7_1:62098832-62098851 | Msa1028900:intron | 5.0% |
| !! | AATAATAAACAAAAAAAAAA+CGG | - | chr7_1:62097883-62097902 | None:intergenic | 5.0% |
| !!! | TTTATATATTTTTTTAAGTT+TGG | + | chr7_1:62098832-62098851 | Msa1028900:intron | 5.0% |
| TTCTCTTCGGGATAGGGTTC+AGG | - | chr7_1:62097950-62097969 | None:intergenic | 50.0% | |
| ! | TGGCTATTTAGGGTTCGGGA+TGG | + | chr7_1:62098359-62098378 | Msa1028900:intron | 50.0% |
| ! | GGCTATTTAGGGTTCGGGAT+GGG | + | chr7_1:62098360-62098379 | Msa1028900:intron | 50.0% |
| ! | GCTATTTAGGGTTCGGGATG+GGG | + | chr7_1:62098361-62098380 | Msa1028900:intron | 50.0% |
| AGCATGCCTCGGTAAAGGAA+AGG | + | chr7_1:62098542-62098561 | Msa1028900:intron | 50.0% | |
| GCATGCCTCGGTAAAGGAAA+GGG | + | chr7_1:62098543-62098562 | Msa1028900:intron | 50.0% | |
| CATAGGACAGGTTGCCTTGT+TGG | + | chr7_1:62099061-62099080 | Msa1028900:CDS | 50.0% | |
| GTGTTTGTCTTCCGCGTTTG+AGG | + | chr7_1:62099108-62099127 | Msa1028900:CDS | 50.0% | |
| TCGCTGATACTCCTCAAACG+CGG | - | chr7_1:62099122-62099141 | None:intergenic | 50.0% | |
| !! | GAGGAGTATCAGCGATTTGC+TGG | + | chr7_1:62099127-62099146 | Msa1028900:CDS | 50.0% |
| ! | TGGTGTTAAATCCAGGGCAG+CGG | + | chr7_1:62099147-62099166 | Msa1028900:CDS | 50.0% |
| GACACTGCCTAAGACTTACG+AGG | - | chr7_1:62099198-62099217 | None:intergenic | 50.0% | |
| !! | TGCGCTTCTTTGAAGCACCT+TGG | - | chr7_1:62099243-62099262 | None:intergenic | 50.0% |
| ! | AAGGTGCTTCAAAGAAGCGC+AGG | + | chr7_1:62099242-62099261 | Msa1028900:CDS | 50.0% |
| TTCTCTTCGGGATAGGGTTC+AGG | - | chr7_1:62097950-62097969 | None:intergenic | 50.0% | |
| ! | TGGCTATTTAGGGTTCGGGA+TGG | + | chr7_1:62098359-62098378 | Msa1028900:intron | 50.0% |
| ! | GGCTATTTAGGGTTCGGGAT+GGG | + | chr7_1:62098360-62098379 | Msa1028900:intron | 50.0% |
| ! | GCTATTTAGGGTTCGGGATG+GGG | + | chr7_1:62098361-62098380 | Msa1028900:intron | 50.0% |
| AGCATGCCTCGGTAAAGGAA+AGG | + | chr7_1:62098542-62098561 | Msa1028900:intron | 50.0% | |
| GCATGCCTCGGTAAAGGAAA+GGG | + | chr7_1:62098543-62098562 | Msa1028900:intron | 50.0% | |
| CATAGGACAGGTTGCCTTGT+TGG | + | chr7_1:62099061-62099080 | Msa1028900:CDS | 50.0% | |
| GTGTTTGTCTTCCGCGTTTG+AGG | + | chr7_1:62099108-62099127 | Msa1028900:CDS | 50.0% | |
| TCGCTGATACTCCTCAAACG+CGG | - | chr7_1:62099122-62099141 | None:intergenic | 50.0% | |
| !! | GAGGAGTATCAGCGATTTGC+TGG | + | chr7_1:62099127-62099146 | Msa1028900:CDS | 50.0% |
| ! | TGGTGTTAAATCCAGGGCAG+CGG | + | chr7_1:62099147-62099166 | Msa1028900:CDS | 50.0% |
| GACACTGCCTAAGACTTACG+AGG | - | chr7_1:62099198-62099217 | None:intergenic | 50.0% | |
| !! | TGCGCTTCTTTGAAGCACCT+TGG | - | chr7_1:62099243-62099262 | None:intergenic | 50.0% |
| ! | AAGGTGCTTCAAAGAAGCGC+AGG | + | chr7_1:62099242-62099261 | Msa1028900:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62097600 | 62099539 | 62097600 | ID=Msa1028900;Name=Msa1028900 |
| chr7_1 | mRNA | 62097600 | 62099539 | 62097600 | ID=Msa1028900-mRNA-1;Parent=Msa1028900;Name=Msa1028900-mRNA-1;_AED=0.09;_eAED=0.09;_QI=95|1|1|1|1|1|5|224|202 |
| chr7_1 | exon | 62097600 | 62097852 | 62097600 | ID=Msa1028900-mRNA-1:exon:13186;Parent=Msa1028900-mRNA-1 |
| chr7_1 | exon | 62097937 | 62098030 | 62097937 | ID=Msa1028900-mRNA-1:exon:13187;Parent=Msa1028900-mRNA-1 |
| chr7_1 | exon | 62098723 | 62098780 | 62098723 | ID=Msa1028900-mRNA-1:exon:13188;Parent=Msa1028900-mRNA-1 |
| chr7_1 | exon | 62098906 | 62098949 | 62098906 | ID=Msa1028900-mRNA-1:exon:13189;Parent=Msa1028900-mRNA-1 |
| chr7_1 | exon | 62099061 | 62099539 | 62099061 | ID=Msa1028900-mRNA-1:exon:13190;Parent=Msa1028900-mRNA-1 |
| chr7_1 | five_prime_UTR | 62097600 | 62097694 | 62097600 | ID=Msa1028900-mRNA-1:five_prime_utr;Parent=Msa1028900-mRNA-1 |
| chr7_1 | CDS | 62097695 | 62097852 | 62097695 | ID=Msa1028900-mRNA-1:cds;Parent=Msa1028900-mRNA-1 |
| chr7_1 | CDS | 62097937 | 62098030 | 62097937 | ID=Msa1028900-mRNA-1:cds;Parent=Msa1028900-mRNA-1 |
| chr7_1 | CDS | 62098723 | 62098780 | 62098723 | ID=Msa1028900-mRNA-1:cds;Parent=Msa1028900-mRNA-1 |
| chr7_1 | CDS | 62098906 | 62098949 | 62098906 | ID=Msa1028900-mRNA-1:cds;Parent=Msa1028900-mRNA-1 |
| chr7_1 | CDS | 62099061 | 62099315 | 62099061 | ID=Msa1028900-mRNA-1:cds;Parent=Msa1028900-mRNA-1 |
| chr7_1 | three_prime_UTR | 62099316 | 62099539 | 62099316 | ID=Msa1028900-mRNA-1:three_prime_utr;Parent=Msa1028900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
