AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0578460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578460 MtrunA17_Chr4g0044811 93.870 522 18 3 1 521 1 509 0.0 1001
Msa0578460 MtrunA17_Chr1g0200791 28.713 202 128 7 190 387 210 399 1.95e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578460 AT3G19280.1 65.253 495 142 3 27 521 37 501 0.0 682
Msa0578460 AT1G49710.1 66.129 496 148 4 27 521 37 513 0.0 679
Msa0578460 AT1G71990.1 33.333 108 71 1 280 387 282 388 1.04e-12 70.5

Find 170 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAATGTTCAATTTATATT+TGG 0.074564 4_1:+83033004 None:intergenic
GGCAATGTTCAATTTATATT+TGG 0.074564 4_1:+83033134 None:intergenic
TGTTTATTGCTTGTGCTTAT+TGG 0.169615 4_1:-83032902 Msa0578460:five_prime_UTR
TTTAGAATTTGAGGTCTTTC+AGG 0.176747 4_1:+83027413 None:intergenic
GGAGCAAAATCTTGAATATT+TGG 0.188827 4_1:+83028840 None:intergenic
TGTTCAGTGGGATGTAAATT+TGG 0.189104 4_1:-83031640 Msa0578460:CDS
GGATGTAAATTTGGGTTTAA+TGG 0.196217 4_1:-83031631 Msa0578460:CDS
CATTCAGTTATCTTACAAAA+AGG 0.223000 4_1:+83027050 None:intergenic
GATGTAAATTTGGGTTTAAT+GGG 0.244101 4_1:-83031630 Msa0578460:CDS
CAAGGTCGCTTCTTGAAGTC+TGG 0.249475 4_1:+83028337 None:intergenic
AGTTGGTGGTGGTAAGAATT+TGG 0.251553 4_1:-83032330 Msa0578460:CDS
TTTCAAAGCCCTTGTGGATA+TGG 0.260182 4_1:-83028431 Msa0578460:CDS
CTGAAACTGGTAAACCTTCT+TGG 0.261326 4_1:+83032540 None:intergenic
CAAATGCAGCCTCAGGTTTC+CGG 0.264039 4_1:+83031605 None:intergenic
ATAAGTATACCTCAAGTAAA+TGG 0.291681 4_1:+83028243 None:intergenic
GAAAAGTCGACGGTTGAAAA+AGG 0.303190 4_1:+83032743 None:intergenic
GTGGTTGAAGGTGATGATTT+TGG 0.305457 4_1:-83032362 Msa0578460:CDS
TTCCTTCTCTCTACTCTTTG+TGG 0.307095 4_1:+83028369 None:intergenic
GCAATGTTCAATTTATATTT+GGG 0.311879 4_1:+83033005 None:intergenic
GCAATGTTCAATTTATATTT+GGG 0.311879 4_1:+83033135 None:intergenic
AGCTAAATTTGTAGCGCGTC+AGG 0.312319 4_1:+83029732 None:intergenic
GAAAGACCTCAAATTCTAAA+AGG 0.322355 4_1:-83027410 Msa0578460:CDS
ATATTCAAGGAACTTTAATA+AGG 0.325455 4_1:-83032255 Msa0578460:CDS
TCCATACAGGAACATGATTC+AGG 0.327965 4_1:+83027438 None:intergenic
AATGAATGATTATATGCTTC+AGG 0.344669 4_1:+83028735 None:intergenic
CGGAAACCTGAGGCTGCATT+TGG 0.349184 4_1:-83031604 Msa0578460:CDS
GTTCAGTGGGATGTAAATTT+GGG 0.358728 4_1:-83031639 Msa0578460:CDS
ACCACAAGTGCTACAAATAA+AGG 0.376044 4_1:+83032470 None:intergenic
TGAAACTGGTAAACCTTCTT+GGG 0.382153 4_1:+83032541 None:intergenic
GAATGTTCATATTTAATGTT+GGG 0.395274 4_1:-83027032 Msa0578460:three_prime_UTR
AAATTCGACCATTTCTTCTT+CGG 0.400382 4_1:+83032497 None:intergenic
AACATCTCGATCGACTCTTA+TGG 0.406384 4_1:-83030758 Msa0578460:CDS
CCTACTTTGGCCAACTCATC+GGG 0.406998 4_1:-83027118 Msa0578460:three_prime_UTR
GAAATTTCGAGCACCACAAT+TGG 0.407353 4_1:+83030814 None:intergenic
TTGGAGGTAGAATTAATTGA+TGG 0.407497 4_1:-83032591 Msa0578460:exon
AATCAACATCCCCGTTGAAC+TGG 0.408380 4_1:+83027318 None:intergenic
TTGTCCAACTTGTAACTGTC+TGG 0.411976 4_1:+83026984 None:intergenic
AGAAACTTGTGAGGAGTGGT+TGG 0.412915 4_1:-83032297 Msa0578460:CDS
GGTCTTTCAGGCTTCCATAC+AGG 0.423025 4_1:+83027425 None:intergenic
GTTGAAACTGAAACTGAAAC+TGG 0.424355 4_1:+83032527 None:intergenic
CGTAAGAACAGCAGTCTTGA+AGG 0.425255 4_1:+83027472 None:intergenic
TTTATACCTTCCAGTTCAAC+GGG 0.427236 4_1:-83027328 Msa0578460:CDS
ACTCTTATGGTAGTTGTCAT+AGG 0.429860 4_1:-83030745 Msa0578460:CDS
ATGAATGATTATATGCTTCA+GGG 0.430093 4_1:+83028736 None:intergenic
TGCCTCTGTGTCAAGCCCGC+AGG 0.433454 4_1:+83027356 None:intergenic
CAACGGTTCCGAAGAAGAAA+TGG 0.436167 4_1:-83032505 Msa0578460:CDS
CGGTCACGTGCGGTGGTTGA+AGG 0.440213 4_1:-83032374 Msa0578460:CDS
ACAGTTGATGTGCACCTGAT+AGG 0.440474 4_1:-83033043 Msa0578460:five_prime_UTR
ACAGTTGATGTGCACCTGAT+AGG 0.440474 4_1:-83033173 Msa0578460:five_prime_UTR
GCTTGTGGAGGTAGTTGAAA+TGG 0.440524 4_1:+83032681 None:intergenic
CCCTGAATCATGTTCCTGTA+TGG 0.440726 4_1:-83027439 Msa0578460:CDS
ATTGCACTTTAGTCGTCAAT+GGG 0.444933 4_1:+83032807 None:intergenic
ATCATATCTATGTGAGAGAA+AGG 0.446491 4_1:-83028285 Msa0578460:CDS
GATTGCACTTTAGTCGTCAA+TGG 0.448686 4_1:+83032806 None:intergenic
TGAATGTTCATATTTAATGT+TGG 0.452494 4_1:-83027033 Msa0578460:three_prime_UTR
TTGTAATGCCTACCCTACTT+TGG 0.467710 4_1:-83027131 Msa0578460:three_prime_UTR
AGAGAGAAACTTGTGAGGAG+TGG 0.467808 4_1:-83032301 Msa0578460:CDS
GGAACTATCCCTGTGGTTGT+TGG 0.468275 4_1:-83028867 Msa0578460:CDS
GCCTTTATTTGTAGCACTTG+TGG 0.470674 4_1:-83032471 Msa0578460:CDS
TTGCCGCCTTTGCATTCACT+TGG 0.471450 4_1:-83028392 Msa0578460:CDS
AAAAGGTGGCGATAAATTGA+AGG 0.471707 4_1:-83027393 Msa0578460:CDS
TCATATCTATGTGAGAGAAA+GGG 0.471718 4_1:-83028284 Msa0578460:CDS
TGCTAGGTATCTCATGGACT+TGG 0.478874 4_1:+83028764 None:intergenic
CTTAATAGGTGGAAGTATGA+AGG 0.479545 4_1:-83028466 Msa0578460:intron
TGAGGAGTGGTTGGAGAGAG+AGG 0.482262 4_1:-83032288 Msa0578460:CDS
TAGGTGATCATGTAAATTGT+AGG 0.484604 4_1:+83027225 None:intergenic
GAAATCAAGGAATTGAAGAT+TGG 0.486045 4_1:-83032610 Msa0578460:five_prime_UTR
GTTTGTGAAATGATTTACTT+TGG 0.489363 4_1:+83032983 None:intergenic
GTTTGTGAAATGATTTACTT+TGG 0.489363 4_1:+83033113 None:intergenic
CCCTACTTTGGCCAACTCAT+CGG 0.491718 4_1:-83027119 Msa0578460:three_prime_UTR
AATTTGGGTTTAATGGGGAC+CGG 0.493352 4_1:-83031624 Msa0578460:CDS
AAGTTGGACAACAAGATTGT+GGG 0.495761 4_1:-83026972 Msa0578460:three_prime_UTR
AAGGTCGCTTCTTGAAGTCT+GGG 0.499184 4_1:+83028338 None:intergenic
TGTTGATTTCAGAAGTCACT+TGG 0.501731 4_1:-83027303 Msa0578460:CDS
CTTTATACCTTCCAGTTCAA+CGG 0.510464 4_1:-83027329 Msa0578460:CDS
AATGTAAATCCCCGATGAGT+TGG 0.515882 4_1:+83027108 None:intergenic
AGGATGCTGTTATATATTCA+AGG 0.517703 4_1:-83032268 Msa0578460:CDS
GGGTTAGAGACAGTTGGTGG+TGG 0.519319 4_1:-83032341 Msa0578460:CDS
TTTGGCTTACCTCAGCAAGC+TGG 0.521291 4_1:-83031586 Msa0578460:CDS
GCCTCTGTGTCAAGCCCGCA+GGG 0.522965 4_1:+83027357 None:intergenic
CCATACCAGCAACAAGCGAC+TGG 0.524286 4_1:+83029660 None:intergenic
TTTATATATCAAAGAACTAG+AGG 0.526597 4_1:-83028802 Msa0578460:CDS
GGGCTTCGAGAGCTTGCAAT+CGG 0.529518 4_1:+83030792 None:intergenic
TTCAAACGAAACAAAAGATA+AGG 0.529677 4_1:+83026911 None:intergenic
CAGATCTAGCAATTTAACTC+TGG 0.532467 4_1:-83027498 Msa0578460:CDS
CGACCTTGCAAGTGCACTCG+AGG 0.534412 4_1:-83028322 Msa0578460:CDS
CTATCATCTGACGTCCCTGT+TGG 0.535464 4_1:-83030917 Msa0578460:CDS
TCTTGCCATGGCACGACGGT+GGG 0.536126 4_1:-83031509 Msa0578460:intron
AGAAAGGGGAACATTTGAGA+TGG 0.538112 4_1:-83028269 Msa0578460:CDS
TGGAGGTAGAATTAATTGAT+GGG 0.539644 4_1:-83032590 Msa0578460:exon
GACCCTCGAGTGCACTTGCA+AGG 0.544331 4_1:+83028319 None:intergenic
AGATGGAGTCCATTTACTTG+AGG 0.544735 4_1:-83028252 Msa0578460:intron
GCAAAATCTTGAATATTTGG+AGG 0.547789 4_1:+83028843 None:intergenic
TTTGGGTTAGAGACAGTTGG+TGG 0.548513 4_1:-83032344 Msa0578460:CDS
GCTAAATTTGTAGCGCGTCA+GGG 0.548640 4_1:+83029733 None:intergenic
CCCGATGAGTTGGCCAAAGT+AGG 0.548703 4_1:+83027118 None:intergenic
CATAGGAATCGTGATGGAAG+AGG 0.549344 4_1:-83030728 Msa0578460:intron
GGTAAGCCAAATGCAGCCTC+AGG 0.550885 4_1:+83031598 None:intergenic
ATCAAGGAATTGAAGATTGG+AGG 0.555036 4_1:-83032607 Msa0578460:five_prime_UTR
CCGATGAGTTGGCCAAAGTA+GGG 0.555178 4_1:+83027119 None:intergenic
CCATACAGGAACATGATTCA+GGG 0.555223 4_1:+83027439 None:intergenic
AGCAAGTGTTCTGAGATCAA+TGG 0.556001 4_1:-83031560 Msa0578460:CDS
CTTCAACCACCGCACGTGAC+CGG 0.560057 4_1:+83032375 None:intergenic
CTGACGTGAAATTAAGAAGA+GGG 0.561015 4_1:+83033066 None:intergenic
CTGACGTGAAATTAAGAAGA+GGG 0.561015 4_1:+83033196 None:intergenic
ATCTTGCCATGGCACGACGG+TGG 0.561163 4_1:-83031510 Msa0578460:CDS
CAAGTTGGACAACAAGATTG+TGG 0.561262 4_1:-83026973 Msa0578460:three_prime_UTR
CTTGTGGAGGTAGTTGAAAT+GGG 0.561566 4_1:+83032682 None:intergenic
GCTTACCCACCGTCGTGCCA+TGG 0.563480 4_1:+83031504 None:intergenic
TGATTCTTTCAAAGCCCTTG+TGG 0.563594 4_1:-83028437 Msa0578460:CDS
ACGACGTGAAATTAAGAAGA+GGG 0.564798 4_1:+83032936 None:intergenic
TTAATAGGTGGAAGTATGAA+GGG 0.568822 4_1:-83028465 Msa0578460:intron
ATGTAAATTTGGGTTTAATG+GGG 0.569442 4_1:-83031629 Msa0578460:CDS
CATATCTATGTGAGAGAAAG+GGG 0.571252 4_1:-83028283 Msa0578460:CDS
TGGTTGCTGACTTGTTCTAC+CGG 0.572262 4_1:-83032394 Msa0578460:CDS
TTTGGAGGACCAACAACCAC+AGG 0.573436 4_1:+83028858 None:intergenic
ACAACAACAACAACCCAAGA+AGG 0.574015 4_1:-83032554 Msa0578460:CDS
TGTAGCACTTGTGGTTATTG+CGG 0.574927 4_1:-83032462 Msa0578460:CDS
ATGGGCTGAGTATGACATCA+TGG 0.579350 4_1:-83030885 Msa0578460:CDS
GAATGGAAGTCATGTTCAGT+GGG 0.580562 4_1:-83031652 Msa0578460:CDS
GTAAATCATTTCACAAACAT+AGG 0.583548 4_1:-83032978 Msa0578460:five_prime_UTR
GTAAATCATTTCACAAACAT+AGG 0.583548 4_1:-83033108 Msa0578460:five_prime_UTR
ACAAAGCCATGCCGACTCCA+TGG 0.583599 4_1:+83027150 None:intergenic
TATGGCTAAGAACGCAGCTA+TGG 0.583698 4_1:-83032414 Msa0578460:CDS
ATATCCAGACAGTTACAAGT+TGG 0.588936 4_1:-83026988 Msa0578460:three_prime_UTR
TTTAGGAATGAGTATGACCA+TGG 0.596619 4_1:-83027167 Msa0578460:three_prime_UTR
GTTTACAAAATATACCCTGC+GGG 0.597021 4_1:-83027371 Msa0578460:CDS
GTTCTACCGGTCACGTGCGG+TGG 0.597759 4_1:-83032381 Msa0578460:CDS
AGGGACGTCAGATGATAGAC+TGG 0.597764 4_1:+83030922 None:intergenic
AATCATTTCACAAACATAGG+AGG 0.599221 4_1:-83032975 Msa0578460:five_prime_UTR
AATCATTTCACAAACATAGG+AGG 0.599221 4_1:-83033105 Msa0578460:five_prime_UTR
ATTACTTCAAACTTGGCACA+AGG 0.599899 4_1:+83027272 None:intergenic
TAAGTGAAAGAGCTAATGCT+AGG 0.600320 4_1:+83027206 None:intergenic
CTTGCTGTTCCAGCTTGCTG+AGG 0.609503 4_1:+83031577 None:intergenic
AACATCCCCGTTGAACTGGA+AGG 0.611381 4_1:+83027322 None:intergenic
TTCAGTTTCAGTTTCAACAA+CGG 0.612540 4_1:-83032522 Msa0578460:CDS
ATTTGAAAATTCTAACGAGG+AGG 0.613665 4_1:-83029705 Msa0578460:CDS
GGCCACAAAGAGTAGAGAGA+AGG 0.614704 4_1:-83028371 Msa0578460:CDS
TGAGTTGGCCAAAGTAGGGT+AGG 0.615807 4_1:+83027123 None:intergenic
ATTAGAGAGAGAAACTTGTG+AGG 0.617371 4_1:-83032306 Msa0578460:CDS
TGTTCTGAGATCAATGGAGT+CGG 0.617911 4_1:-83031554 Msa0578460:CDS
AACGACGTGAAATTAAGAAG+AGG 0.621082 4_1:+83032935 None:intergenic
AATGAGTATGACCATGGAGT+CGG 0.621200 4_1:-83027161 Msa0578460:three_prime_UTR
GGAATGGAAGTCATGTTCAG+TGG 0.622651 4_1:-83031653 Msa0578460:CDS
AGTTGTCATAGGAATCGTGA+TGG 0.623002 4_1:-83030734 Msa0578460:CDS
AGACCTCAAATTCTAAAAGG+TGG 0.623532 4_1:-83027407 Msa0578460:CDS
TGCAGAGAACAATCTTGCCA+TGG 0.638573 4_1:-83031521 Msa0578460:CDS
GTATGACCATGGAGTCGGCA+TGG 0.639743 4_1:-83027156 Msa0578460:three_prime_UTR
GTACAGCTGCCATATCCACA+AGG 0.639994 4_1:+83028422 None:intergenic
AAGCATATAATCATTCATTG+AGG 0.644737 4_1:-83028731 Msa0578460:intron
TTGTGGCCAAGTGAATGCAA+AGG 0.647931 4_1:+83028386 None:intergenic
TGGCCAAGTGAATGCAAAGG+CGG 0.648142 4_1:+83028389 None:intergenic
TCTGACGTGAAATTAAGAAG+AGG 0.651327 4_1:+83033065 None:intergenic
TCTGACGTGAAATTAAGAAG+AGG 0.651327 4_1:+83033195 None:intergenic
GACCTTGCAAGTGCACTCGA+GGG 0.651570 4_1:-83028321 Msa0578460:CDS
AGGGCTTTGAAAGAATCAGA+TGG 0.653261 4_1:+83028442 None:intergenic
AATGTTCAAAGTCTACGGAG+TGG 0.663539 4_1:+83032843 None:intergenic
TAATGGGGACCGGAAACCTG+AGG 0.665866 4_1:-83031614 Msa0578460:CDS
TGAAGAGAGAGAAAAGTCGA+CGG 0.672347 4_1:+83032733 None:intergenic
CTTGTTCTACCGGTCACGTG+CGG 0.672406 4_1:-83032384 Msa0578460:CDS
AGCATTTGAAAATTCTAACG+AGG 0.673819 4_1:-83029708 Msa0578460:CDS
ACCCTGCGGGCTTGACACAG+AGG 0.679828 4_1:-83027358 Msa0578460:CDS
CTACTTTGGCCAACTCATCG+GGG 0.698540 4_1:-83027117 Msa0578460:three_prime_UTR
TTGGAGGACCAACAACCACA+GGG 0.701308 4_1:+83028859 None:intergenic
TACAGCTGCCATATCCACAA+GGG 0.711712 4_1:+83028423 None:intergenic
ACAATCTTGCCATGGCACGA+CGG 0.711769 4_1:-83031513 Msa0578460:CDS
TGTTGTAGGAACTATCCCTG+TGG 0.713149 4_1:-83028874 Msa0578460:intron
GGTTTACAAAATATACCCTG+CGG 0.717875 4_1:-83027372 Msa0578460:CDS
TTGCACTTTAGTCGTCAATG+GGG 0.725763 4_1:+83032808 None:intergenic
TTATACCTTCCAGTTCAACG+GGG 0.752006 4_1:-83027327 Msa0578460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTAAAAAAAATTGAAAT+AGG + chr4_1:83029064-83029083 None:intergenic 10.0%
!!! AATAACTTTTAATTTGTTTT+TGG + chr4_1:83030547-83030566 None:intergenic 10.0%
!!! AAACAAATTAAAAGTTATTT+TGG - chr4_1:83030548-83030567 Msa0578460:intron 10.0%
!!! AAATCAAAATATCCATATTT+TGG + chr4_1:83028282-83028301 None:intergenic 15.0%
!!! AACTTTATTTAAAAGAATGA+AGG - chr4_1:83029935-83029954 Msa0578460:intron 15.0%
!! TTGATATATAAAAATGAATC+AGG + chr4_1:83031268-83031287 None:intergenic 15.0%
!!! TATTTGATCGTAATTTATTT+TGG + chr4_1:83031925-83031944 None:intergenic 15.0%
!!! TATGATACTATTTATTTCTT+AGG + chr4_1:83032014-83032033 None:intergenic 15.0%
!!! TATGATACTATTTATTTCTT+AGG + chr4_1:83032014-83032033 None:intergenic 15.0%
!! GCAATGTTCAATTTATATTT+GGG + chr4_1:83026946-83026965 None:intergenic 20.0%
!! GCAATGTTCAATTTATATTT+GGG + chr4_1:83026946-83026965 None:intergenic 20.0%
!! ATATTCAAGGAACTTTAATA+AGG - chr4_1:83027823-83027842 Msa0578460:intron 20.0%
!! AATTATTTGTATCAAGGATT+GGG - chr4_1:83028034-83028053 Msa0578460:intron 20.0%
!! GTGAATAAATTTCATCAAAA+AGG + chr4_1:83028074-83028093 None:intergenic 20.0%
!!! TATCTGAAAAATGTTGTTTT+TGG - chr4_1:83028253-83028272 Msa0578460:CDS 20.0%
!! TTGATGAAAACTAAAAACAA+AGG + chr4_1:83029003-83029022 None:intergenic 20.0%
!!! AGAAGTTATTTTCAAAAACT+AGG + chr4_1:83029535-83029554 None:intergenic 20.0%
!!! TCAGATGAAGAATTTTAAAA+GGG - chr4_1:83029740-83029759 Msa0578460:CDS 20.0%
!!! ATAATGCTTTTTGAAAGAAT+TGG - chr4_1:83030005-83030024 Msa0578460:intron 20.0%
!! AATTGTCATACATAAACAAT+GGG + chr4_1:83030229-83030248 None:intergenic 20.0%
!! TAATTGTCATACATAAACAA+TGG + chr4_1:83030230-83030249 None:intergenic 20.0%
!!! AATGTACCATAATTTTTGTT+TGG + chr4_1:83030892-83030911 None:intergenic 20.0%
!! AAACAAAAATTATGGTACAT+TGG - chr4_1:83030891-83030910 Msa0578460:CDS 20.0%
!! AACAAAAATTATGGTACATT+GGG - chr4_1:83030892-83030911 Msa0578460:CDS 20.0%
!! TTTATATATCAAAGAACTAG+AGG - chr4_1:83031276-83031295 Msa0578460:intron 20.0%
!! ATTATATACTGCAATATTCT+AGG + chr4_1:83031497-83031516 None:intergenic 20.0%
!! AATATTGCAGTATATAATCT+GGG - chr4_1:83031499-83031518 Msa0578460:intron 20.0%
!!! ATTTGGTTTTAAAATGTGAA+TGG - chr4_1:83031534-83031553 Msa0578460:CDS 20.0%
!!! TTTTTGTATTTTGTGATTTG+TGG - chr4_1:83031570-83031589 Msa0578460:CDS 20.0%
!! ATTCAGTTATCTTACAAAAA+GGG + chr4_1:83033030-83033049 None:intergenic 20.0%
!! TGAATGTTCATATTTAATGT+TGG - chr4_1:83033045-83033064 Msa0578460:five_prime_UTR 20.0%
!! GAATGTTCATATTTAATGTT+GGG - chr4_1:83033046-83033065 Msa0578460:five_prime_UTR 20.0%
! GGCAATGTTCAATTTATATT+TGG + chr4_1:83026947-83026966 None:intergenic 25.0%
! GTTTGTGAAATGATTTACTT+TGG + chr4_1:83026968-83026987 None:intergenic 25.0%
! GTAAATCATTTCACAAACAT+AGG - chr4_1:83026970-83026989 Msa0578460:three_prime_UTR 25.0%
! GGCAATGTTCAATTTATATT+TGG + chr4_1:83026947-83026966 None:intergenic 25.0%
! GTTTGTGAAATGATTTACTT+TGG + chr4_1:83026968-83026987 None:intergenic 25.0%
! GTAAATCATTTCACAAACAT+AGG - chr4_1:83026970-83026989 Msa0578460:three_prime_UTR 25.0%
!! TTTTCAATGTTCAAAGTCTA+CGG + chr4_1:83027243-83027262 None:intergenic 25.0%
!!! TATTTTTTCACCCAAAAACT+TGG + chr4_1:83027444-83027463 None:intergenic 25.0%
!!! TTTTTGGGTGAAAAAATAGT+GGG - chr4_1:83027446-83027465 Msa0578460:CDS 25.0%
! CTTGATACAAATAATTCACA+TGG + chr4_1:83028030-83028049 None:intergenic 25.0%
! CATGTGAATTATTTGTATCA+AGG - chr4_1:83028028-83028047 Msa0578460:intron 25.0%
! GAATTATTTGTATCAAGGAT+TGG - chr4_1:83028033-83028052 Msa0578460:intron 25.0%
!! GATGTAAATTTGGGTTTAAT+GGG - chr4_1:83028448-83028467 Msa0578460:CDS 25.0%
!! ATGTAAATTTGGGTTTAATG+GGG - chr4_1:83028449-83028468 Msa0578460:CDS 25.0%
!! GTTGATTCATTACATTTGAT+TGG - chr4_1:83028610-83028629 Msa0578460:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr4_1:83028686-83028705 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr4_1:83028693-83028712 Msa0578460:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr4_1:83028733-83028752 None:intergenic 25.0%
!!! GTTGTTGTAGTATTTTAGTA+TGG - chr4_1:83028813-83028832 Msa0578460:CDS 25.0%
!!! TTCGTTTTTCTTGTTTTCTA+AGG - chr4_1:83029029-83029048 Msa0578460:intron 25.0%
!!! TTTTCAGTTTTTGGCTTTAT+CGG + chr4_1:83029221-83029240 None:intergenic 25.0%
! AAAACATCATAATCAGACAT+TGG + chr4_1:83029408-83029427 None:intergenic 25.0%
!!! ATCAGAAAGCATTTTATACA+TGG + chr4_1:83029562-83029581 None:intergenic 25.0%
! CATCAAGATTTATAAATGAG+AGG - chr4_1:83029663-83029682 Msa0578460:intron 25.0%
!! TTTAAAATTCTTCATCTGAC+AGG + chr4_1:83029739-83029758 None:intergenic 25.0%
!! GTCAGATGAAGAATTTTAAA+AGG - chr4_1:83029739-83029758 Msa0578460:CDS 25.0%
! TAAACTTTAACTCAGTGATT+TGG - chr4_1:83029771-83029790 Msa0578460:intron 25.0%
! GAAAGGAAGAAACAAAAAAT+GGG + chr4_1:83029841-83029860 None:intergenic 25.0%
! ATTTAAAAGAATGAAGGAGT+TGG - chr4_1:83029941-83029960 Msa0578460:intron 25.0%
! TTATCCTTGAAGATCTATAT+TGG - chr4_1:83030058-83030077 Msa0578460:intron 25.0%
! ACAAAAATTCATTGGAAGTT+TGG + chr4_1:83030257-83030276 None:intergenic 25.0%
! TACGAACAACAAAAATTCAT+TGG + chr4_1:83030265-83030284 None:intergenic 25.0%
! ATGTGTTGAATTTGAATAAC+TGG + chr4_1:83030478-83030497 None:intergenic 25.0%
! TTATTCAAATTCAACACATG+TGG - chr4_1:83030479-83030498 Msa0578460:intron 25.0%
!! CATAAAATTTTCACAACTGA+TGG + chr4_1:83030599-83030618 None:intergenic 25.0%
! CTTCAACTCTAAATAAACTT+TGG + chr4_1:83030639-83030658 None:intergenic 25.0%
!!! TTAGTCGTTTTTATAATTGC+AGG - chr4_1:83030717-83030736 Msa0578460:intron 25.0%
! GATGAACCAAACAAAAATTA+TGG - chr4_1:83030883-83030902 Msa0578460:CDS 25.0%
!! CAATTTTATTGCAAATGAAG+TGG - chr4_1:83030946-83030965 Msa0578460:CDS 25.0%
! TAGAGAAAAAATTGTCTTTC+AGG + chr4_1:83030988-83031007 None:intergenic 25.0%
! AAGTGAATTTCCATGTATAA+TGG - chr4_1:83031077-83031096 Msa0578460:intron 25.0%
!! AAATTTTCCACCATTATACA+TGG + chr4_1:83031090-83031109 None:intergenic 25.0%
!!! AATGGTGGAAAATTTTATAG+CGG - chr4_1:83031095-83031114 Msa0578460:intron 25.0%
! TATAAAAATGAATCAGGAGA+AGG + chr4_1:83031262-83031281 None:intergenic 25.0%
! ATGAATGATTATATGCTTCA+GGG + chr4_1:83031345-83031364 None:intergenic 25.0%
! AATGAATGATTATATGCTTC+AGG + chr4_1:83031346-83031365 None:intergenic 25.0%
! AAGCATATAATCATTCATTG+AGG - chr4_1:83031347-83031366 Msa0578460:intron 25.0%
! TGAAAACAAACAAGTTTCTT+CGG - chr4_1:83031383-83031402 Msa0578460:intron 25.0%
!!! AATATTCTAGGATCCAATTA+TGG + chr4_1:83031485-83031504 None:intergenic 25.0%
! GAATATTGCAGTATATAATC+TGG - chr4_1:83031498-83031517 Msa0578460:intron 25.0%
! ATAAGTATACCTCAAGTAAA+TGG + chr4_1:83031838-83031857 None:intergenic 25.0%
! TAGTATCATATGATTGTGTT+TGG - chr4_1:83032024-83032043 Msa0578460:intron 25.0%
! GAATATCATATGATTGTGTT+TGG - chr4_1:83032104-83032123 Msa0578460:intron 25.0%
! TAGTATCATATGATTGTGTT+TGG - chr4_1:83032024-83032043 Msa0578460:intron 25.0%
!!! TGTTTTAATATAAGCTATCC+TGG - chr4_1:83032330-83032349 Msa0578460:CDS 25.0%
! AATAACCAGAAAAGAACTTA+TGG - chr4_1:83032365-83032384 Msa0578460:CDS 25.0%
! ACTTATTTGAATTTATCTGC+TGG + chr4_1:83032446-83032465 None:intergenic 25.0%
! TAAAATGATAGGTACCATAA+TGG + chr4_1:83032490-83032509 None:intergenic 25.0%
! ATGGAATAAGCTAAAATGAT+AGG + chr4_1:83032501-83032520 None:intergenic 25.0%
! CATGACATTCTTAATAAAGA+TGG + chr4_1:83032520-83032539 None:intergenic 25.0%
!!! ACACATTATTTTGACACAAA+TGG - chr4_1:83032556-83032575 Msa0578460:CDS 25.0%
!!! CACATTATTTTGACACAAAT+GGG - chr4_1:83032557-83032576 Msa0578460:CDS 25.0%
! CACAAAAATTACTTCAAACT+TGG + chr4_1:83032816-83032835 None:intergenic 25.0%
! TTCAGTTATCTTACAAAAAG+GGG + chr4_1:83033029-83033048 None:intergenic 25.0%
! CATTCAGTTATCTTACAAAA+AGG + chr4_1:83033031-83033050 None:intergenic 25.0%
! TTCAAACGAAACAAAAGATA+AGG + chr4_1:83033170-83033189 None:intergenic 25.0%
!!! TATATTTGGGCTTTTGAGAT+GGG + chr4_1:83026933-83026952 None:intergenic 30.0%
!! TTATATTTGGGCTTTTGAGA+TGG + chr4_1:83026934-83026953 None:intergenic 30.0%
AATCATTTCACAAACATAGG+AGG - chr4_1:83026973-83026992 Msa0578460:three_prime_UTR 30.0%
!!! TATATTTGGGCTTTTGAGAT+GGG + chr4_1:83026933-83026952 None:intergenic 30.0%
!! TTATATTTGGGCTTTTGAGA+TGG + chr4_1:83026934-83026953 None:intergenic 30.0%
AATCATTTCACAAACATAGG+AGG - chr4_1:83026973-83026992 Msa0578460:three_prime_UTR 30.0%
TGTTTATTGCTTGTGCTTAT+TGG - chr4_1:83027176-83027195 Msa0578460:three_prime_UTR 30.0%
! CATCTTCAATCCAAGTTTTT+GGG - chr4_1:83027431-83027450 Msa0578460:CDS 30.0%
!!! GTTTTTGGGTGAAAAAATAG+TGG - chr4_1:83027445-83027464 Msa0578460:CDS 30.0%
! GAAAAAATAGTGGGAAATCA+AGG - chr4_1:83027455-83027474 Msa0578460:CDS 30.0%
GAAATCAAGGAATTGAAGAT+TGG - chr4_1:83027468-83027487 Msa0578460:CDS 30.0%
TTGGAGGTAGAATTAATTGA+TGG - chr4_1:83027487-83027506 Msa0578460:CDS 30.0%
TGGAGGTAGAATTAATTGAT+GGG - chr4_1:83027488-83027507 Msa0578460:CDS 30.0%
TTCAGTTTCAGTTTCAACAA+CGG - chr4_1:83027556-83027575 Msa0578460:intron 30.0%
AAATTCGACCATTTCTTCTT+CGG + chr4_1:83027584-83027603 None:intergenic 30.0%
AGGATGCTGTTATATATTCA+AGG - chr4_1:83027810-83027829 Msa0578460:intron 30.0%
AGTTGTAGCAAATTTGTGTT+TGG - chr4_1:83027957-83027976 Msa0578460:intron 30.0%
ATTCACAAGCTAGATGATTA+TGG - chr4_1:83028088-83028107 Msa0578460:intron 30.0%
AAGCATATTCAAAATCAACC+AGG - chr4_1:83028117-83028136 Msa0578460:intron 30.0%
! TTTTGTGGTTTATTTCCTGA+TGG - chr4_1:83028159-83028178 Msa0578460:intron 30.0%
TTCAGTGACAAGTTTAATCA+TGG - chr4_1:83028301-83028320 Msa0578460:CDS 30.0%
ACTTCATAAGAACAATAACC+AGG + chr4_1:83028367-83028386 None:intergenic 30.0%
GTTATTAGTTCATTCAATGC+AGG - chr4_1:83028404-83028423 Msa0578460:CDS 30.0%
! GGATGTAAATTTGGGTTTAA+TGG - chr4_1:83028447-83028466 Msa0578460:CDS 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr4_1:83028698-83028717 None:intergenic 30.0%
! TGGTTTTTGATAGAACGTTA+TGG - chr4_1:83028737-83028756 Msa0578460:CDS 30.0%
! GAAACTTTTGTGGTTTAATG+TGG - chr4_1:83028871-83028890 Msa0578460:intron 30.0%
!! TATCTTCTCTCATTTTTGAC+TGG - chr4_1:83028923-83028942 Msa0578460:intron 30.0%
!! TTTTGACTGGATTTAAAACC+AGG - chr4_1:83028936-83028955 Msa0578460:intron 30.0%
TTTCTTTGTCATTGTCTACT+AGG - chr4_1:83029108-83029127 Msa0578460:intron 30.0%
!!! CGAGATGTTTGTTTTTTCTA+GGG + chr4_1:83029309-83029328 None:intergenic 30.0%
!!! TCGAGATGTTTGTTTTTTCT+AGG + chr4_1:83029310-83029329 None:intergenic 30.0%
! TTTTGCTGCATTATCTTGTT+TGG - chr4_1:83029454-83029473 Msa0578460:intron 30.0%
! GCATTATCTTGTTTGGAATA+CGG - chr4_1:83029461-83029480 Msa0578460:intron 30.0%
AACATTTGATCCATAGATCT+TGG - chr4_1:83029640-83029659 Msa0578460:intron 30.0%
GGGAAAATAGAGAAATCAAA+GGG + chr4_1:83029821-83029840 None:intergenic 30.0%
TGGGAAAATAGAGAAATCAA+AGG + chr4_1:83029822-83029841 None:intergenic 30.0%
GGAAAGGAAGAAACAAAAAA+TGG + chr4_1:83029842-83029861 None:intergenic 30.0%
GAAACAAAAGTTCAAGAAAG+TGG + chr4_1:83029983-83030002 None:intergenic 30.0%
!! ATGCTTTTTGAAAGAATTGG+TGG - chr4_1:83030008-83030027 Msa0578460:intron 30.0%
!! TGCTTTTTGAAAGAATTGGT+GGG - chr4_1:83030009-83030028 Msa0578460:intron 30.0%
AACACCAATATAGATCTTCA+AGG + chr4_1:83030065-83030084 None:intergenic 30.0%
ATCTTCAAGGATGATTGTTT+GGG + chr4_1:83030091-83030110 None:intergenic 30.0%
AATCTTCAAGGATGATTGTT+TGG + chr4_1:83030092-83030111 None:intergenic 30.0%
TCATCCTTGAAGATTTATAC+TGG - chr4_1:83030097-83030116 Msa0578460:intron 30.0%
! GACTTTTCATATCGAATTGT+TGG + chr4_1:83030151-83030170 None:intergenic 30.0%
TAAATGTGCAAAATCCAGTA+TGG - chr4_1:83030190-83030209 Msa0578460:intron 30.0%
! ATTATTCTATTTTGTCGCAG+TGG - chr4_1:83030310-83030329 Msa0578460:intron 30.0%
AGCATTTGAAAATTCTAACG+AGG - chr4_1:83030370-83030389 Msa0578460:intron 30.0%
ATTTGAAAATTCTAACGAGG+AGG - chr4_1:83030373-83030392 Msa0578460:intron 30.0%
! TTAGAGTTGAAGCTCAATTT+TGG - chr4_1:83030647-83030666 Msa0578460:intron 30.0%
! AAGCTCAATTTTGGATAACT+TGG - chr4_1:83030656-83030675 Msa0578460:intron 30.0%
ATACTAGATCAGATTCAGAT+GGG + chr4_1:83030804-83030823 None:intergenic 30.0%
! AGAATGCAAAGTATTAATGC+AGG + chr4_1:83030845-83030864 None:intergenic 30.0%
AATATGACGCAATGGTATAT+TGG + chr4_1:83031041-83031060 None:intergenic 30.0%
TATAGTAGAATATGACGCAA+TGG + chr4_1:83031049-83031068 None:intergenic 30.0%
TGAATTTCCATGTATAATGG+TGG - chr4_1:83031080-83031099 Msa0578460:intron 30.0%
!! ATGGTGGAAAATTTTATAGC+GGG - chr4_1:83031096-83031115 Msa0578460:intron 30.0%
GCAAAATCTTGAATATTTGG+AGG + chr4_1:83031238-83031257 None:intergenic 30.0%
GGAGCAAAATCTTGAATATT+TGG + chr4_1:83031241-83031260 None:intergenic 30.0%
CATAATGACTTAATACGAGA+GGG + chr4_1:83031429-83031448 None:intergenic 30.0%
ACATAATGACTTAATACGAG+AGG + chr4_1:83031430-83031449 None:intergenic 30.0%
ATTTATTTACATTGCACCGA+AGG - chr4_1:83031451-83031470 Msa0578460:intron 30.0%
! AATTATGGTGTTAAGTCCTT+CGG + chr4_1:83031470-83031489 None:intergenic 30.0%
TGCTGAGTTATCTTCTTAAT+AGG - chr4_1:83031598-83031617 Msa0578460:CDS 30.0%
TGAGTTATCTTCTTAATAGG+TGG - chr4_1:83031601-83031620 Msa0578460:CDS 30.0%
! TTAATAGGTGGAAGTATGAA+GGG - chr4_1:83031613-83031632 Msa0578460:CDS 30.0%
ATCATATCTATGTGAGAGAA+AGG - chr4_1:83031793-83031812 Msa0578460:intron 30.0%
TCATATCTATGTGAGAGAAA+GGG - chr4_1:83031794-83031813 Msa0578460:intron 30.0%
ATCAAGTTTAACACAAGTAC+TGG + chr4_1:83031960-83031979 None:intergenic 30.0%
AGTACTTGTGTTAAACTTGA+TGG - chr4_1:83031959-83031978 Msa0578460:intron 30.0%
!!! AAACACTTTTGAGACTGTTA+GGG + chr4_1:83032420-83032439 None:intergenic 30.0%
!!! TAAACACTTTTGAGACTGTT+AGG + chr4_1:83032421-83032440 None:intergenic 30.0%
!! TAGGTACCATAATGGATTTA+GGG + chr4_1:83032482-83032501 None:intergenic 30.0%
!! ATAGGTACCATAATGGATTT+AGG + chr4_1:83032483-83032502 None:intergenic 30.0%
! TTTAGAATTTGAGGTCTTTC+AGG + chr4_1:83032668-83032687 None:intergenic 30.0%
GAAAGACCTCAAATTCTAAA+AGG - chr4_1:83032668-83032687 Msa0578460:five_prime_UTR 30.0%
TAGGTGATCATGTAAATTGT+AGG + chr4_1:83032856-83032875 None:intergenic 30.0%
! AACTGAGAGAATGAAGTTTT+AGG - chr4_1:83032894-83032913 Msa0578460:five_prime_UTR 30.0%
TACAAAAAGGGGTTTAAGTA+TGG + chr4_1:83033018-83033037 None:intergenic 30.0%
CTGACGTGAAATTAAGAAGA+GGG + chr4_1:83026885-83026904 None:intergenic 35.0%
TCTGACGTGAAATTAAGAAG+AGG + chr4_1:83026886-83026905 None:intergenic 35.0%
CTGACGTGAAATTAAGAAGA+GGG + chr4_1:83026885-83026904 None:intergenic 35.0%
TCTGACGTGAAATTAAGAAG+AGG + chr4_1:83026886-83026905 None:intergenic 35.0%
ACGACGTGAAATTAAGAAGA+GGG + chr4_1:83027145-83027164 None:intergenic 35.0%
AACGACGTGAAATTAAGAAG+AGG + chr4_1:83027146-83027165 None:intergenic 35.0%
ATTGCACTTTAGTCGTCAAT+GGG + chr4_1:83027274-83027293 None:intergenic 35.0%
! TTTGCATTTCTTTTCGTCGA+CGG - chr4_1:83027295-83027314 Msa0578460:CDS 35.0%
GATGGAAAAAATGAAGCTTG+TGG + chr4_1:83027415-83027434 None:intergenic 35.0%
CCAAAAACTTGGATTGAAGA+TGG + chr4_1:83027433-83027452 None:intergenic 35.0%
! CCATCTTCAATCCAAGTTTT+TGG - chr4_1:83027430-83027449 Msa0578460:CDS 35.0%
ATCAAGGAATTGAAGATTGG+AGG - chr4_1:83027471-83027490 Msa0578460:CDS 35.0%
TGAAACTGGTAAACCTTCTT+GGG + chr4_1:83027540-83027559 None:intergenic 35.0%
GTTGAAACTGAAACTGAAAC+TGG + chr4_1:83027554-83027573 None:intergenic 35.0%
ACCACAAGTGCTACAAATAA+AGG + chr4_1:83027611-83027630 None:intergenic 35.0%
! TGGTTGAAGGTGATGATTTT+GGG - chr4_1:83027717-83027736 Msa0578460:intron 35.0%
ATTAGAGAGAGAAACTTGTG+AGG - chr4_1:83027772-83027791 Msa0578460:intron 35.0%
!!! AAGGAACCTGTTTTTGTTTC+TGG - chr4_1:83027842-83027861 Msa0578460:intron 35.0%
!!! TGTTTTTGGCAGCCAAAATA+TGG - chr4_1:83028267-83028286 Msa0578460:CDS 35.0%
TATTCACATATGTTACCTCC+TGG - chr4_1:83028346-83028365 Msa0578460:CDS 35.0%
TCATAAGAACAATAACCAGG+AGG + chr4_1:83028364-83028383 None:intergenic 35.0%
TAGTTCATTCAATGCAGGAA+TGG - chr4_1:83028409-83028428 Msa0578460:CDS 35.0%
TGTTCAGTGGGATGTAAATT+TGG - chr4_1:83028438-83028457 Msa0578460:CDS 35.0%
GTTCAGTGGGATGTAAATTT+GGG - chr4_1:83028439-83028458 Msa0578460:CDS 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr4_1:83028705-83028724 Msa0578460:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr4_1:83028717-83028736 Msa0578460:intron 35.0%
! AGTATGGTTCTATAGTTCCA+TGG - chr4_1:83028829-83028848 Msa0578460:CDS 35.0%
TATAGTTCCATGGAAATGTG+TGG - chr4_1:83028839-83028858 Msa0578460:CDS 35.0%
ATAGTTCCATGGAAATGTGT+GGG - chr4_1:83028840-83028859 Msa0578460:CDS 35.0%
TTTGTCATTGTCTACTAGGA+GGG - chr4_1:83029112-83029131 Msa0578460:intron 35.0%
! TCCCTGTTGGATATTTTTCA+TGG - chr4_1:83029174-83029193 Msa0578460:intron 35.0%
CCCATGAAAAATATCCAACA+GGG + chr4_1:83029178-83029197 None:intergenic 35.0%
! CCCTGTTGGATATTTTTCAT+GGG - chr4_1:83029175-83029194 Msa0578460:intron 35.0%
!!! GCAAGAGCTTTTTCAGTTTT+TGG + chr4_1:83029230-83029249 None:intergenic 35.0%
!!! GCTGCTTTTATTTCCAATTG+TGG - chr4_1:83029251-83029270 Msa0578460:intron 35.0%
ACTCTTATGGTAGTTGTCAT+AGG - chr4_1:83029333-83029352 Msa0578460:intron 35.0%
AAGATAATGCAGCAAAAGTG+GGG + chr4_1:83029451-83029470 None:intergenic 35.0%
CAAGATAATGCAGCAAAAGT+GGG + chr4_1:83029452-83029471 None:intergenic 35.0%
ACAAGATAATGCAGCAAAAG+TGG + chr4_1:83029453-83029472 None:intergenic 35.0%
! TTATCTTGTTTGGAATACGG+AGG - chr4_1:83029464-83029483 Msa0578460:intron 35.0%
AATCTTGATGCCAAGATCTA+TGG + chr4_1:83029653-83029672 None:intergenic 35.0%
GGATTAGGCATTAAGTTTAC+AGG + chr4_1:83029718-83029737 None:intergenic 35.0%
ATTCTTCATCTGACAGGATT+AGG + chr4_1:83029733-83029752 None:intergenic 35.0%
! TTGTTTCTTCCTTTCCTTCT+TGG - chr4_1:83029846-83029865 Msa0578460:intron 35.0%
TGTTTCTTCCTTTCCTTCTT+GGG - chr4_1:83029847-83029866 Msa0578460:intron 35.0%
CAAAAGTTCAAGAAAGTGGA+AGG + chr4_1:83029979-83029998 None:intergenic 35.0%
!! GCTTTTTGAAAGAATTGGTG+GGG - chr4_1:83030010-83030029 Msa0578460:intron 35.0%
AACGCCAGTATAAATCTTCA+AGG + chr4_1:83030104-83030123 None:intergenic 35.0%
! GAACAATTTCAAGTCCATAC+TGG + chr4_1:83030207-83030226 None:intergenic 35.0%
CTGGTAAATGAAAGTAAGAG+AGG + chr4_1:83030459-83030478 None:intergenic 35.0%
ACATGTGGAATAGTTGTTCA+AGG - chr4_1:83030494-83030513 Msa0578460:intron 35.0%
CATGTGGAATAGTTGTTCAA+GGG - chr4_1:83030495-83030514 Msa0578460:intron 35.0%
!!! TTTTGGTTCTTGCTTCCATT+TGG - chr4_1:83030565-83030584 Msa0578460:intron 35.0%
CTGATGGAGAAAAAACCAAA+TGG + chr4_1:83030583-83030602 None:intergenic 35.0%
AAACTTTGGCAATTGCATTG+CGG + chr4_1:83030625-83030644 None:intergenic 35.0%
TAAAGCAGCATTGTCTAAGA+TGG + chr4_1:83030773-83030792 None:intergenic 35.0%
GATACTAGATCAGATTCAGA+TGG + chr4_1:83030805-83030824 None:intergenic 35.0%
GATCTAGTATCAGTGTCTAT+TGG - chr4_1:83030814-83030833 Msa0578460:CDS 35.0%
ATGGTACATTGGGTAGTAAA+TGG - chr4_1:83030902-83030921 Msa0578460:CDS 35.0%
! TGGTGGAAAATTTTATAGCG+GGG - chr4_1:83031097-83031116 Msa0578460:intron 35.0%
!! TGCAGAAGAAGTTTTGTAAG+AGG + chr4_1:83031173-83031192 None:intergenic 35.0%
! GCAAATCAATCTCTTGTTGT+AGG - chr4_1:83031190-83031209 Msa0578460:intron 35.0%
GAAGGACTTAACACCATAAT+TGG - chr4_1:83031469-83031488 Msa0578460:intron 35.0%
! CTTAATAGGTGGAAGTATGA+AGG - chr4_1:83031612-83031631 Msa0578460:CDS 35.0%
CATATCTATGTGAGAGAAAG+GGG - chr4_1:83031795-83031814 Msa0578460:intron 35.0%
! TTAAACTTGATGGCATCTCT+TGG - chr4_1:83031969-83031988 Msa0578460:intron 35.0%
TTAAGCTGTTTACCCAAACA+GGG + chr4_1:83032229-83032248 None:intergenic 35.0%
ATTAAGCTGTTTACCCAAAC+AGG + chr4_1:83032230-83032249 None:intergenic 35.0%
! CATGTCCATAAGTTCTTTTC+TGG + chr4_1:83032373-83032392 None:intergenic 35.0%
AACAGACCCTAAATCCATTA+TGG - chr4_1:83032473-83032492 Msa0578460:CDS 35.0%
CAGATCTAGCAATTTAACTC+TGG - chr4_1:83032580-83032599 Msa0578460:exon 35.0%
! AGACCTCAAATTCTAAAAGG+TGG - chr4_1:83032671-83032690 Msa0578460:five_prime_UTR 35.0%
AAAAGGTGGCGATAAATTGA+AGG - chr4_1:83032685-83032704 Msa0578460:five_prime_UTR 35.0%
GGTTTACAAAATATACCCTG+CGG - chr4_1:83032706-83032725 Msa0578460:five_prime_UTR 35.0%
GTTTACAAAATATACCCTGC+GGG - chr4_1:83032707-83032726 Msa0578460:five_prime_UTR 35.0%
CTTTATACCTTCCAGTTCAA+CGG - chr4_1:83032749-83032768 Msa0578460:five_prime_UTR 35.0%
TTTATACCTTCCAGTTCAAC+GGG - chr4_1:83032750-83032769 Msa0578460:five_prime_UTR 35.0%
!! TGTTGATTTCAGAAGTCACT+TGG - chr4_1:83032775-83032794 Msa0578460:five_prime_UTR 35.0%
ATTACTTCAAACTTGGCACA+AGG + chr4_1:83032809-83032828 None:intergenic 35.0%
TAAGTGAAAGAGCTAATGCT+AGG + chr4_1:83032875-83032894 None:intergenic 35.0%
TTTAGGAATGAGTATGACCA+TGG - chr4_1:83032911-83032930 Msa0578460:five_prime_UTR 35.0%
ATATCCAGACAGTTACAAGT+TGG - chr4_1:83033090-83033109 Msa0578460:five_prime_UTR 35.0%
AAGTTGGACAACAAGATTGT+GGG - chr4_1:83033106-83033125 Msa0578460:five_prime_UTR 35.0%
!!! TTTTGAGATGGGTTCCTATC+AGG + chr4_1:83026922-83026941 None:intergenic 40.0%
!!! TTTTGAGATGGGTTCCTATC+AGG + chr4_1:83026922-83026941 None:intergenic 40.0%
AATGTTCAAAGTCTACGGAG+TGG + chr4_1:83027238-83027257 None:intergenic 40.0%
TTGCACTTTAGTCGTCAATG+GGG + chr4_1:83027273-83027292 None:intergenic 40.0%
GATTGCACTTTAGTCGTCAA+TGG + chr4_1:83027275-83027294 None:intergenic 40.0%
GAAAAGTCGACGGTTGAAAA+AGG + chr4_1:83027338-83027357 None:intergenic 40.0%
TGAAGAGAGAGAAAAGTCGA+CGG + chr4_1:83027348-83027367 None:intergenic 40.0%
! CGACTTTTCTCTCTCTTCAA+TGG - chr4_1:83027349-83027368 Msa0578460:CDS 40.0%
CTTGTGGAGGTAGTTGAAAT+GGG + chr4_1:83027399-83027418 None:intergenic 40.0%
GGAAAAAATGAAGCTTGTGG+AGG + chr4_1:83027412-83027431 None:intergenic 40.0%
ACAACAACAACAACCCAAGA+AGG - chr4_1:83027524-83027543 Msa0578460:intron 40.0%
CTGAAACTGGTAAACCTTCT+TGG + chr4_1:83027541-83027560 None:intergenic 40.0%
! GCCTTTATTTGTAGCACTTG+TGG - chr4_1:83027607-83027626 Msa0578460:intron 40.0%
TGTAGCACTTGTGGTTATTG+CGG - chr4_1:83027616-83027635 Msa0578460:intron 40.0%
!!! GTTTTTGGGTAGGTTGGATA+TGG - chr4_1:83027646-83027665 Msa0578460:intron 40.0%
! GTGGTTGAAGGTGATGATTT+TGG - chr4_1:83027716-83027735 Msa0578460:intron 40.0%
!!! GATTTTGGGTTAGAGACAGT+TGG - chr4_1:83027731-83027750 Msa0578460:intron 40.0%
!! AGTTGGTGGTGGTAAGAATT+TGG - chr4_1:83027748-83027767 Msa0578460:intron 40.0%
TCAGCTCCAGAAACAAAAAC+AGG + chr4_1:83027851-83027870 None:intergenic 40.0%
!!! TTTTGTTTCTGGAGCTGAAC+AGG - chr4_1:83027853-83027872 Msa0578460:intron 40.0%
!! GCAAATTTGTGTTTGGTGTC+TGG - chr4_1:83027964-83027983 Msa0578460:intron 40.0%
AGACTAAGAACAGCTTAACC+TGG + chr4_1:83028138-83028157 None:intergenic 40.0%
! GCTGTTCTTAGTCTGTTTTG+TGG - chr4_1:83028144-83028163 Msa0578460:intron 40.0%
AAAGTCTATAGCTCACCATC+AGG + chr4_1:83028177-83028196 None:intergenic 40.0%
!!! ATCACGCGTTTTTTATCTGC+AGG - chr4_1:83028200-83028219 Msa0578460:intron 40.0%
GAATGGAAGTCATGTTCAGT+GGG - chr4_1:83028426-83028445 Msa0578460:CDS 40.0%
! AATTTGGGTTTAATGGGGAC+CGG - chr4_1:83028454-83028473 Msa0578460:CDS 40.0%
!! AGCAAGTGTTCTGAGATCAA+TGG - chr4_1:83028518-83028537 Msa0578460:intron 40.0%
!! TGTTCTGAGATCAATGGAGT+CGG - chr4_1:83028524-83028543 Msa0578460:intron 40.0%
TAGTTCCATGGAAATGTGTG+GGG - chr4_1:83028841-83028860 Msa0578460:CDS 40.0%
! GGGTAATGCAGAAACTTTTG+TGG - chr4_1:83028861-83028880 Msa0578460:CDS 40.0%
TGATTAGCACTCGCAATGAA+AGG + chr4_1:83028966-83028985 None:intergenic 40.0%
CTTTGTCATTGTCTACTAGG+AGG - chr4_1:83029111-83029130 Msa0578460:intron 40.0%
TTGTCATTGTCTACTAGGAG+GGG - chr4_1:83029113-83029132 Msa0578460:intron 40.0%
GCCCATGAAAAATATCCAAC+AGG + chr4_1:83029179-83029198 None:intergenic 40.0%
GAAATTTCGAGCACCACAAT+TGG + chr4_1:83029267-83029286 None:intergenic 40.0%
! AACATCTCGATCGACTCTTA+TGG - chr4_1:83029320-83029339 Msa0578460:intron 40.0%
AGTTGTCATAGGAATCGTGA+TGG - chr4_1:83029344-83029363 Msa0578460:intron 40.0%
TTTGAAAGAATTGGTGGGGT+TGG - chr4_1:83030014-83030033 Msa0578460:intron 40.0%
! GGTGGAAAATTTTATAGCGG+GGG - chr4_1:83031098-83031117 Msa0578460:intron 40.0%
!! GAAAATTTTATAGCGGGGGT+TGG - chr4_1:83031102-83031121 Msa0578460:intron 40.0%
! GTTTTCTGCTAGGTATCTCA+TGG + chr4_1:83031323-83031342 None:intergenic 40.0%
!! AGGGCTTTGAAAGAATCAGA+TGG + chr4_1:83031639-83031658 None:intergenic 40.0%
TGATTCTTTCAAAGCCCTTG+TGG - chr4_1:83031641-83031660 Msa0578460:CDS 40.0%
TTTCAAAGCCCTTGTGGATA+TGG - chr4_1:83031647-83031666 Msa0578460:CDS 40.0%
TTCCTTCTCTCTACTCTTTG+TGG + chr4_1:83031712-83031731 None:intergenic 40.0%
AGAAAGGGGAACATTTGAGA+TGG - chr4_1:83031809-83031828 Msa0578460:intron 40.0%
AGATGGAGTCCATTTACTTG+AGG - chr4_1:83031826-83031845 Msa0578460:intron 40.0%
ATGGCATCTCTTGGTTTCTT+TGG - chr4_1:83031978-83031997 Msa0578460:intron 40.0%
CCATACAGGAACATGATTCA+GGG + chr4_1:83032642-83032661 None:intergenic 40.0%
TCCATACAGGAACATGATTC+AGG + chr4_1:83032643-83032662 None:intergenic 40.0%
!!! TCGCCACCTTTTAGAATTTG+AGG + chr4_1:83032677-83032696 None:intergenic 40.0%
TTATACCTTCCAGTTCAACG+GGG - chr4_1:83032751-83032770 Msa0578460:five_prime_UTR 40.0%
AATGAGTATGACCATGGAGT+CGG - chr4_1:83032917-83032936 Msa0578460:five_prime_UTR 40.0%
TTGTAATGCCTACCCTACTT+TGG - chr4_1:83032947-83032966 Msa0578460:five_prime_UTR 40.0%
AATGTAAATCCCCGATGAGT+TGG + chr4_1:83032973-83032992 None:intergenic 40.0%
TTGTCCAACTTGTAACTGTC+TGG + chr4_1:83033097-83033116 None:intergenic 40.0%
! CAAGTTGGACAACAAGATTG+TGG - chr4_1:83033105-83033124 Msa0578460:five_prime_UTR 40.0%
! ACAGTTGATGTGCACCTGAT+AGG - chr4_1:83026905-83026924 Msa0578460:three_prime_UTR 45.0%
! ACAGTTGATGTGCACCTGAT+AGG - chr4_1:83026905-83026924 Msa0578460:three_prime_UTR 45.0%
GCTTGTGGAGGTAGTTGAAA+TGG + chr4_1:83027400-83027419 None:intergenic 45.0%
CAACGGTTCCGAAGAAGAAA+TGG - chr4_1:83027573-83027592 Msa0578460:intron 45.0%
! TATTGCGGAGATCGCGTTTT+TGG - chr4_1:83027631-83027650 Msa0578460:intron 45.0%
! ATTGCGGAGATCGCGTTTTT+GGG - chr4_1:83027632-83027651 Msa0578460:intron 45.0%
TATGGCTAAGAACGCAGCTA+TGG - chr4_1:83027664-83027683 Msa0578460:intron 45.0%
!! TGGTTGCTGACTTGTTCTAC+CGG - chr4_1:83027684-83027703 Msa0578460:intron 45.0%
! TTTGGGTTAGAGACAGTTGG+TGG - chr4_1:83027734-83027753 Msa0578460:intron 45.0%
AGAGAGAAACTTGTGAGGAG+TGG - chr4_1:83027777-83027796 Msa0578460:intron 45.0%
AGAAACTTGTGAGGAGTGGT+TGG - chr4_1:83027781-83027800 Msa0578460:intron 45.0%
GGAATGGAAGTCATGTTCAG+TGG - chr4_1:83028425-83028444 Msa0578460:CDS 45.0%
TGCAGAGAACAATCTTGCCA+TGG - chr4_1:83028557-83028576 Msa0578460:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_1:83028786-83028805 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_1:83028787-83028806 None:intergenic 45.0%
CATTACCCCACACATTTCCA+TGG + chr4_1:83028849-83028868 None:intergenic 45.0%
! ATGGGCTGAGTATGACATCA+TGG - chr4_1:83029193-83029212 Msa0578460:intron 45.0%
! CATAGGAATCGTGATGGAAG+AGG - chr4_1:83029350-83029369 Msa0578460:intron 45.0%
ATACGGAGGAACAAAGTCAC+TGG - chr4_1:83029478-83029497 Msa0578460:intron 45.0%
TACGGAGGAACAAAGTCACT+GGG - chr4_1:83029479-83029498 Msa0578460:intron 45.0%
CTGGGTTGTAGATCGTAACA+TGG - chr4_1:83029497-83029516 Msa0578460:intron 45.0%
AAAGTCTGGACTACTGATGC+AGG + chr4_1:83029875-83029894 None:intergenic 45.0%
CAGTAGTCCAGACTTTCTGT+TGG - chr4_1:83029879-83029898 Msa0578460:intron 45.0%
TTCTGCACCAACAGAAAGTC+TGG + chr4_1:83029889-83029908 None:intergenic 45.0%
! TTTTGTCGCAGTGGACAAAC+TGG - chr4_1:83030319-83030338 Msa0578460:intron 45.0%
GCTAAATTTGTAGCGCGTCA+GGG + chr4_1:83030348-83030367 None:intergenic 45.0%
AGCTAAATTTGTAGCGCGTC+AGG + chr4_1:83030349-83030368 None:intergenic 45.0%
!! TTTTTCCAGTCGCTTGTTGC+TGG - chr4_1:83030413-83030432 Msa0578460:intron 45.0%
TGTTGTAGGAACTATCCCTG+TGG - chr4_1:83031204-83031223 Msa0578460:intron 45.0%
TGCTAGGTATCTCATGGACT+TGG + chr4_1:83031317-83031336 None:intergenic 45.0%
! ATGCTTCAGGGTTTTCTGCT+AGG + chr4_1:83031333-83031352 None:intergenic 45.0%
ATACGAGAGGGATGCAGAAA+AGG + chr4_1:83031417-83031436 None:intergenic 45.0%
CTGGGCATCTTGAGCTTATT+TGG - chr4_1:83031517-83031536 Msa0578460:CDS 45.0%
TACAGCTGCCATATCCACAA+GGG + chr4_1:83031658-83031677 None:intergenic 45.0%
TTGTGGCCAAGTGAATGCAA+AGG + chr4_1:83031695-83031714 None:intergenic 45.0%
AAGGTCGCTTCTTGAAGTCT+GGG + chr4_1:83031743-83031762 None:intergenic 45.0%
CAGAGTCAGATGACTCTGTT+TGG - chr4_1:83032055-83032074 Msa0578460:intron 45.0%
! TCAGACTTCAGAGCATCTCT+TGG - chr4_1:83032127-83032146 Msa0578460:intron 45.0%
! AGAGCATCTCTTGGTTTCTC+TGG - chr4_1:83032136-83032155 Msa0578460:intron 45.0%
AGAGTCAGATGACCCTGTTT+GGG - chr4_1:83032214-83032233 Msa0578460:intron 45.0%
! GTTATTTCCACAAGCTCTCC+AGG + chr4_1:83032351-83032370 None:intergenic 45.0%
CGTAAGAACAGCAGTCTTGA+AGG + chr4_1:83032609-83032628 None:intergenic 45.0%
CCCTGAATCATGTTCCTGTA+TGG - chr4_1:83032639-83032658 Msa0578460:five_prime_UTR 45.0%
AATCAACATCCCCGTTGAAC+TGG + chr4_1:83032763-83032782 None:intergenic 45.0%
! GCATTTCTTTTCGTCGACGG+AGG - chr4_1:83027298-83027317 Msa0578460:CDS 50.0%
!!! GATCGCGTTTTTGGGTAGGT+TGG - chr4_1:83027640-83027659 Msa0578460:intron 50.0%
CAAATGCAGCCTCAGGTTTC+CGG + chr4_1:83028476-83028495 None:intergenic 50.0%
! TTTGGCTTACCTCAGCAAGC+TGG - chr4_1:83028492-83028511 Msa0578460:intron 50.0%
ACAATCTTGCCATGGCACGA+CGG - chr4_1:83028565-83028584 Msa0578460:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_1:83028782-83028801 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_1:83028788-83028807 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_1:83028785-83028804 Msa0578460:CDS 50.0%
! CTCGCAATGAAAGGTACACC+TGG + chr4_1:83028957-83028976 None:intergenic 50.0%
AGGGACGTCAGATGATAGAC+TGG + chr4_1:83029159-83029178 None:intergenic 50.0%
CTATCATCTGACGTCCCTGT+TGG - chr4_1:83029161-83029180 Msa0578460:intron 50.0%
TGCTTTCTGATGAGTGCCAC+TGG - chr4_1:83029571-83029590 Msa0578460:intron 50.0%
! CTACCATGCTTTAGGTCCAG+TGG + chr4_1:83029590-83029609 None:intergenic 50.0%
CACTGGACCTAAAGCATGGT+AGG - chr4_1:83029588-83029607 Msa0578460:intron 50.0%
GTGTGCTCCTACCATGCTTT+AGG + chr4_1:83029598-83029617 None:intergenic 50.0%
TGCAGGAACCCAAGAAGGAA+AGG + chr4_1:83029858-83029877 None:intergenic 50.0%
ACTGATGCAGGAACCCAAGA+AGG + chr4_1:83029863-83029882 None:intergenic 50.0%
GGAACTATCCCTGTGGTTGT+TGG - chr4_1:83031211-83031230 Msa0578460:intron 50.0%
TTGGAGGACCAACAACCACA+GGG + chr4_1:83031222-83031241 None:intergenic 50.0%
TTTGGAGGACCAACAACCAC+AGG + chr4_1:83031223-83031242 None:intergenic 50.0%
GTACAGCTGCCATATCCACA+AGG + chr4_1:83031659-83031678 None:intergenic 50.0%
TTGCCGCCTTTGCATTCACT+TGG - chr4_1:83031686-83031705 Msa0578460:intron 50.0%
TGGCCAAGTGAATGCAAAGG+CGG + chr4_1:83031692-83031711 None:intergenic 50.0%
GGCCACAAAGAGTAGAGAGA+AGG - chr4_1:83031707-83031726 Msa0578460:intron 50.0%
CAAGGTCGCTTCTTGAAGTC+TGG + chr4_1:83031744-83031763 None:intergenic 50.0%
CAGAGTCAGATGACCCTGTT+TGG - chr4_1:83032213-83032232 Msa0578460:intron 50.0%
AAGCTATCCTGGAGAGCTTG+TGG - chr4_1:83032341-83032360 Msa0578460:CDS 50.0%
GGTCTTTCAGGCTTCCATAC+AGG + chr4_1:83032656-83032675 None:intergenic 50.0%
AACATCCCCGTTGAACTGGA+AGG + chr4_1:83032759-83032778 None:intergenic 50.0%
! TGAGTTGGCCAAAGTAGGGT+AGG + chr4_1:83032958-83032977 None:intergenic 50.0%
! CCGATGAGTTGGCCAAAGTA+GGG + chr4_1:83032962-83032981 None:intergenic 50.0%
CCCTACTTTGGCCAACTCAT+CGG - chr4_1:83032959-83032978 Msa0578460:five_prime_UTR 50.0%
CCTACTTTGGCCAACTCATC+GGG - chr4_1:83032960-83032979 Msa0578460:five_prime_UTR 50.0%
CTACTTTGGCCAACTCATCG+GGG - chr4_1:83032961-83032980 Msa0578460:five_prime_UTR 50.0%
!!! CGGAGATCGCGTTTTTGGGT+AGG - chr4_1:83027636-83027655 Msa0578460:intron 55.0%
CTTGTTCTACCGGTCACGTG+CGG - chr4_1:83027694-83027713 Msa0578460:intron 55.0%
!! GGGTTAGAGACAGTTGGTGG+TGG - chr4_1:83027737-83027756 Msa0578460:intron 55.0%
TGAGGAGTGGTTGGAGAGAG+AGG - chr4_1:83027790-83027809 Msa0578460:intron 55.0%
TAATGGGGACCGGAAACCTG+AGG - chr4_1:83028464-83028483 Msa0578460:intron 55.0%
CGGAAACCTGAGGCTGCATT+TGG - chr4_1:83028474-83028493 Msa0578460:intron 55.0%
GGTAAGCCAAATGCAGCCTC+AGG + chr4_1:83028483-83028502 None:intergenic 55.0%
!! CTTGCTGTTCCAGCTTGCTG+AGG + chr4_1:83028504-83028523 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_1:83028774-83028793 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_1:83028773-83028792 Msa0578460:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4_1:83028774-83028793 Msa0578460:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_1:83028780-83028799 Msa0578460:CDS 55.0%
GGGCTTCGAGAGCTTGCAAT+CGG + chr4_1:83029289-83029308 None:intergenic 55.0%
! GTGCCACTGGACCTAAAGCA+TGG - chr4_1:83029584-83029603 Msa0578460:intron 55.0%
CCATACCAGCAACAAGCGAC+TGG + chr4_1:83030421-83030440 None:intergenic 55.0%
! CCAGTCGCTTGTTGCTGGTA+TGG - chr4_1:83030418-83030437 Msa0578460:intron 55.0%
GACCTTGCAAGTGCACTCGA+GGG - chr4_1:83031757-83031776 Msa0578460:intron 55.0%
GTATGACCATGGAGTCGGCA+TGG - chr4_1:83032922-83032941 Msa0578460:five_prime_UTR 55.0%
!! ACAAAGCCATGCCGACTCCA+TGG + chr4_1:83032931-83032950 None:intergenic 55.0%
! CCCGATGAGTTGGCCAAAGT+AGG + chr4_1:83032963-83032982 None:intergenic 55.0%
CTTCAACCACCGCACGTGAC+CGG + chr4_1:83027706-83027725 None:intergenic 60.0%
ATCTTGCCATGGCACGACGG+TGG - chr4_1:83028568-83028587 Msa0578460:intron 60.0%
TCTTGCCATGGCACGACGGT+GGG - chr4_1:83028569-83028588 Msa0578460:intron 60.0%
CGACCTTGCAAGTGCACTCG+AGG - chr4_1:83031756-83031775 Msa0578460:intron 60.0%
GACCCTCGAGTGCACTTGCA+AGG + chr4_1:83031762-83031781 None:intergenic 60.0%
GTTCTACCGGTCACGTGCGG+TGG - chr4_1:83027697-83027716 Msa0578460:intron 65.0%
CGGTCACGTGCGGTGGTTGA+AGG - chr4_1:83027704-83027723 Msa0578460:intron 65.0%
GCTTACCCACCGTCGTGCCA+TGG + chr4_1:83028577-83028596 None:intergenic 65.0%
ACCCTGCGGGCTTGACACAG+AGG - chr4_1:83032720-83032739 Msa0578460:five_prime_UTR 65.0%
GCCTCTGTGTCAAGCCCGCA+GGG + chr4_1:83032724-83032743 None:intergenic 65.0%
TGCCTCTGTGTCAAGCCCGC+AGG + chr4_1:83032725-83032744 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 83026880 83033220 83026880 ID=Msa0578460;Name=Msa0578460
chr4_1 mRNA 83026880 83033220 83026880 ID=Msa0578460-mRNA-1;Parent=Msa0578460;Name=Msa0578460-mRNA-1;_AED=0.05;_eAED=0.05;_QI=626|0.71|0.75|0.87|1|1|8|382|521
chr4_1 exon 83026880 83027517 83026880 ID=Msa0578460-mRNA-1:exon:30220;Parent=Msa0578460-mRNA-1
chr4_1 exon 83028253 83028480 83028253 ID=Msa0578460-mRNA-1:exon:30219;Parent=Msa0578460-mRNA-1
chr4_1 exon 83028732 83028888 83028732 ID=Msa0578460-mRNA-1:exon:30218;Parent=Msa0578460-mRNA-1
chr4_1 exon 83029666 83029770 83029666 ID=Msa0578460-mRNA-1:exon:30217;Parent=Msa0578460-mRNA-1
chr4_1 exon 83030729 83030970 83030729 ID=Msa0578460-mRNA-1:exon:30216;Parent=Msa0578460-mRNA-1
chr4_1 exon 83031143 83031186 83031143 ID=Msa0578460-mRNA-1:exon:30215;Parent=Msa0578460-mRNA-1
chr4_1 exon 83031510 83031674 83031510 ID=Msa0578460-mRNA-1:exon:30214;Parent=Msa0578460-mRNA-1
chr4_1 exon 83032226 83033220 83032226 ID=Msa0578460-mRNA-1:exon:30213;Parent=Msa0578460-mRNA-1
chr4_1 five_prime_UTR 83032595 83033220 83032595 ID=Msa0578460-mRNA-1:five_prime_utr;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83032226 83032594 83032226 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83031510 83031674 83031510 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83031143 83031186 83031143 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83030729 83030970 83030729 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83029666 83029770 83029666 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83028732 83028888 83028732 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83028253 83028480 83028253 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 CDS 83027262 83027517 83027262 ID=Msa0578460-mRNA-1:cds;Parent=Msa0578460-mRNA-1
chr4_1 three_prime_UTR 83026880 83027261 83026880 ID=Msa0578460-mRNA-1:three_prime_utr;Parent=Msa0578460-mRNA-1
Gene Sequence

>Msa0578460

ATGGGTCTCGTTTCAAGAACAACAACAACAACCCAAGAAGGTTTACCAGTTTCAGTTTCAGTTTCAACAACGGTTCCGAAGAAGAAATGGTCGAATTTAATGCCTTTATTTGTAGCACTTGTGGTTATTGCGGAGATCGCGTTTTTGGGTAGGTTGGATATGGCTAAGAACGCAGCTATGGTTGCTGACTTGTTCTACCGGTCACGTGCGGTGGTTGAAGGTGATGATTTTGGGTTAGAGACAGTTGGTGGTGGTAAGAATTTGGAATTAGAGAGAGAAACTTGTGAGGAGTGGTTGGAGAGAGAGGATGCTGTTATATATTCAAGGAACTTTAATAAGGAACCTGTTTTTGTTTCTGGAGCTGAACAGGAATGGAAGTCATGTTCAGTGGGATGTAAATTTGGGTTTAATGGGGACCGGAAACCTGAGGCTGCATTTGGCTTACCTCAGCAAGCTGGAACAGCAAGTGTTCTGAGATCAATGGAGTCGGCACAATACTATGCAGAGAACAATCTTGCCATGGCACGACGGTGGCAATATGAATATCTTCTCTCATTTTTGACTGGATTTAAAACCAGGAGGGGATATCACATTGTAATGACAACCAGTCTATCATCTGACGTCCCTGTTGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCGATAAAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCTTTTATTTCCAATTGTGGTGCTCGAAATTTCCGATTGCAAGCTCTCGAAGCCCTAGAAAAAACAAACATCTCGATCGACTCTTATGGTAGTTGTCATAGGAATCGTGATGGAAGAGTGGACAAACTGGAAACCCTGACGCGCTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAGTTTTTCCAGTCGCTTGTTGCTGGAACTATCCCTGTGGTTGTTGGTCCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGATTCATTTTTATATATCAAAGAACTAGAGGATGTTGAGTCTGTTGCCAAGTCCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCATTCATTGAGGTGGAAGTATGAAGGGCCATCTGATTCTTTCAAAGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAGAGAGAAGGAAGAGAAGAGCCCAGACTTCAAGAAGCGACCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATCTATGTGAGAGAAAGGGGAACATTTGAGATGGAGTCCATTTACTTGAGATCTAGCAATTTAACTCTGGAGTCCTTCAAGACTGCTGTTCTTACGAAGTTCACGTCCCTGAATCATGTTCCTGTATGGAAGCCTGAAAGACCTCAAATTCTAAAAGGTGGCGATAAATTGAAGGTTTACAAAATATACCCTGCGGGCTTGACACAGAGGCAAGCTCTTTATACCTTCCAGTTCAACGGGGATGTTGATTTCAGAAGTCACTTGGAAAGCAATCCTTGTGCCAAGTTTGAAGTAATTTTTGTGTAG
Protein sequence

>Msa0578460

MGLVSRTTTTTQEGLPVSVSVSTTVPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRAVVEGDDFGLETVGGGKNLELERETCEEWLEREDAVIYSRNFNKEPVFVSGAEQEWKSCSVGCKFGFNGDRKPEAAFGLPQQAGTASVLRSMESAQYYAENNLAMARRWQYEYLLSFLTGFKTRRGYHIVMTTSLSSDVPVGYFSWAEYDIMAPIKPKTEKALAAAFISNCGARNFRLQALEALEKTNISIDSYGSCHRNRDGRVDKLETLTRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPSPDSFLYIKELEDVESVAKSMRYLAENPEAYNHSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSREKEEKSPDFKKRPCKCTRGSETVYHIYVRERGTFEMESIYLRSSNLTLESFKTAVLTKFTSLNHVPVWKPERPQILKGGDKLKVYKIYPAGLTQRQALYTFQFNGDVDFRSHLESNPCAKFEVIFV*