Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622440 | XP_003624167.1 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 5.67e-146 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622440 | sp|Q681Z2|DSP3_ARATH | 66.497 | 197 | 65 | 1 | 3 | 198 | 1 | 197 | 4.33e-97 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052780 | Msa0622440 | 0.801083 | 1.064562e-48 | -8.615850e-47 |
| Msa0622440 | Msa0697510 | 0.800577 | 1.350428e-48 | -8.615850e-47 |
| Msa0622440 | Msa1028900 | 0.899907 | 1.244459e-77 | -8.615850e-47 |
| Msa0622440 | Msa1121880 | 0.891221 | 4.842645e-74 | -8.615850e-47 |
| Msa0145430 | Msa0622440 | 0.818455 | 1.942329e-52 | -8.615850e-47 |
| Msa0560280 | Msa0622440 | 0.811452 | 6.952522e-51 | -8.615850e-47 |
| Msa0578460 | Msa0622440 | 0.823297 | 1.494267e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622440 | MtrunA17_Chr7g0249271 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 5.21e-150 | 414 |
| Msa0622440 | MtrunA17_Chr5g0438971 | 61.212 | 165 | 64 | 0 | 5 | 169 | 46 | 210 | 1.48e-74 | 224 |
| Msa0622440 | MtrunA17_Chr4g0075511 | 58.385 | 161 | 67 | 0 | 9 | 169 | 27 | 187 | 3.72e-69 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622440 | AT3G02800.1 | 66.497 | 197 | 65 | 1 | 3 | 198 | 1 | 197 | 4.41e-98 | 283 |
| Msa0622440 | AT5G16480.1 | 65.049 | 206 | 64 | 3 | 1 | 201 | 1 | 203 | 3.79e-95 | 276 |
| Msa0622440 | AT1G05000.1 | 64.238 | 151 | 54 | 0 | 17 | 167 | 53 | 203 | 2.29e-68 | 208 |
| Msa0622440 | AT4G03960.1 | 57.419 | 155 | 66 | 0 | 15 | 169 | 27 | 181 | 4.09e-63 | 194 |
| Msa0622440 | AT1G05000.2 | 53.514 | 185 | 54 | 2 | 17 | 169 | 53 | 237 | 8.67e-63 | 195 |
| Msa0622440 | AT2G32960.1 | 48.691 | 191 | 64 | 1 | 13 | 169 | 57 | 247 | 1.58e-61 | 192 |
| Msa0622440 | AT5G16480.2 | 70.238 | 84 | 22 | 1 | 1 | 84 | 1 | 81 | 5.72e-35 | 119 |
| Msa0622440 | AT1G05000.3 | 71.642 | 67 | 19 | 0 | 17 | 83 | 53 | 119 | 3.46e-28 | 104 |
Find 70 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGCAATGAACCAAAAT+AGG | 0.169489 | 4_2:+74873342 | None:intergenic |
| TGTGAGAAATCACCCTATTT+TGG | 0.209389 | 4_2:-74873355 | Msa0622440:CDS |
| CACATTCAATTGAATAATAA+TGG | 0.229943 | 4_2:-74874586 | Msa0622440:exon |
| ACCCTATCCCGAAGAGAATT+TGG | 0.260001 | 4_2:-74874310 | Msa0622440:CDS |
| AGAGAATTTGGAGTTCTTAA+AGG | 0.262009 | 4_2:-74874298 | Msa0622440:CDS |
| TCTTCAACCATGGAGAAATT+TGG | 0.290243 | 4_2:+74874507 | None:intergenic |
| TGCTCTGAGGGATTCTATTA+TGG | 0.312759 | 4_2:-74873525 | Msa0622440:CDS |
| TTCCAACTCCATTATTTGAT+TGG | 0.315457 | 4_2:-74872936 | Msa0622440:three_prime_UTR |
| CATAGGACAGGTTGCCTTGT+TGG | 0.318667 | 4_2:-74873201 | Msa0622440:CDS |
| AAGAACTCCAAATTCTCTTC+GGG | 0.335320 | 4_2:+74874303 | None:intergenic |
| TTCTCTTCGGGATAGGGTTC+AGG | 0.342295 | 4_2:+74874315 | None:intergenic |
| GCTTCAGAAAGTTGCAGAAT+TGG | 0.346755 | 4_2:-74873176 | Msa0622440:CDS |
| GAGGAGTATCAGCGATTTGC+TGG | 0.359295 | 4_2:-74873135 | Msa0622440:CDS |
| AATTCTACCCAATCAAATAA+TGG | 0.371844 | 4_2:+74872928 | None:intergenic |
| ACATTCAATTGAATAATAAT+GGG | 0.372293 | 4_2:-74874585 | Msa0622440:exon |
| GTTTGCAATGAACCAAAATA+GGG | 0.378578 | 4_2:+74873343 | None:intergenic |
| AAGGGAAAACTGGAAGGTTT+AGG | 0.384197 | 4_2:+74874462 | None:intergenic |
| TAAGAACTCCAAATTCTCTT+CGG | 0.390807 | 4_2:+74874302 | None:intergenic |
| GGTTTGAAGAAAGGGAAAAC+TGG | 0.396149 | 4_2:+74874452 | None:intergenic |
| TCCAAATTCTCTTCGGGATA+GGG | 0.404516 | 4_2:+74874309 | None:intergenic |
| TCCAACTCCATTATTTGATT+GGG | 0.415808 | 4_2:-74872935 | Msa0622440:three_prime_UTR |
| AAGGTTGAGGGTTTGAAGAA+AGG | 0.421342 | 4_2:+74874443 | None:intergenic |
| GTGTTTGTCTTCCGCGTTTG+AGG | 0.428171 | 4_2:-74873154 | Msa0622440:CDS |
| GATTTGCTGGTGTTAAATCC+AGG | 0.432715 | 4_2:-74873122 | Msa0622440:CDS |
| TATACTTCAAAGTAGTTGCT+TGG | 0.439756 | 4_2:-74872905 | Msa0622440:three_prime_UTR |
| AGGTTGAGGGTTTGAAGAAA+GGG | 0.440281 | 4_2:+74874444 | None:intergenic |
| GGTTTGACCTCGTAAGTCTT+AGG | 0.449851 | 4_2:-74873074 | Msa0622440:CDS |
| TGTAAACGAGGATTCGGATT+CGG | 0.454128 | 4_2:+74874628 | None:intergenic |
| GACTCTGTAAATTCTCATCT+TGG | 0.454525 | 4_2:+74872989 | None:intergenic |
| TGTGCGTGTAAACGAGGATT+CGG | 0.455840 | 4_2:+74874622 | None:intergenic |
| ATCTTTATGCAGCATAGGAC+AGG | 0.458017 | 4_2:-74873213 | Msa0622440:intron |
| CTCCAAATTCTCTTCGGGAT+AGG | 0.463257 | 4_2:+74874308 | None:intergenic |
| TGAGTTATGAGATTAATTGT+AGG | 0.467259 | 4_2:-74872751 | Msa0622440:three_prime_UTR |
| AAATGTTAAATCCGCTGCCC+TGG | 0.469169 | 4_2:+74873104 | None:intergenic |
| CATGATAGAGCGAAGGTTGA+GGG | 0.471110 | 4_2:+74874431 | None:intergenic |
| ATAAATGCAATCTTCAACCA+TGG | 0.485613 | 4_2:+74874497 | None:intergenic |
| TCTTTGAAGCACCTTGGTAC+TGG | 0.489070 | 4_2:+74873028 | None:intergenic |
| CAAATAATGGAGTTGGAACC+CGG | 0.489415 | 4_2:+74872941 | None:intergenic |
| ACCCAATCAAATAATGGAGT+TGG | 0.503021 | 4_2:+74872934 | None:intergenic |
| GCAGCTAAAATGATGTCAGC+CGG | 0.526267 | 4_2:+74872965 | None:intergenic |
| CGGATTTAACATTTATAGAG+AGG | 0.527211 | 4_2:-74873095 | Msa0622440:CDS |
| GGTTCATTGCAAACAAGGAA+AGG | 0.528428 | 4_2:-74873334 | Msa0622440:intron |
| AAAGATCTTTGAAAAGCCTA+AGG | 0.535376 | 4_2:+74872863 | None:intergenic |
| ACATGATAGAGCGAAGGTTG+AGG | 0.535379 | 4_2:+74874430 | None:intergenic |
| CAGCTAAAATGATGTCAGCC+GGG | 0.536546 | 4_2:+74872966 | None:intergenic |
| TCCTCCACCAAATTTCTCCA+TGG | 0.537020 | 4_2:-74874514 | Msa0622440:CDS |
| AGAATCCCTCAGAGCAGGTA+AGG | 0.540312 | 4_2:+74873532 | None:intergenic |
| TCAACCATGGAGAAATTTGG+TGG | 0.540768 | 4_2:+74874510 | None:intergenic |
| AGTTTCCTTACCTGCTCTGA+GGG | 0.541367 | 4_2:-74873537 | Msa0622440:CDS |
| ATAATAGAATCCCTCAGAGC+AGG | 0.553968 | 4_2:+74873527 | None:intergenic |
| ATTTGGAATCGAGGGCAAAA+CGG | 0.561591 | 4_2:-74874253 | Msa0622440:intron |
| ATGAGAATTTACAGAGTCCC+CGG | 0.562012 | 4_2:-74872984 | Msa0622440:CDS |
| TGCGCTTCTTTGAAGCACCT+TGG | 0.567421 | 4_2:+74873022 | None:intergenic |
| TGAAGAAAGGGAAAACTGGA+AGG | 0.573241 | 4_2:+74874456 | None:intergenic |
| TCTGAGGGATTCTATTATGG+AGG | 0.578245 | 4_2:-74873522 | Msa0622440:CDS |
| GACTGAACATTATTATCCTT+AGG | 0.581387 | 4_2:-74872879 | Msa0622440:three_prime_UTR |
| TGGTGTTAAATCCAGGGCAG+CGG | 0.584305 | 4_2:-74873115 | Msa0622440:CDS |
| ATTTGCTGGTGTTAAATCCA+GGG | 0.594403 | 4_2:-74873121 | Msa0622440:CDS |
| ACCATGGAGAAATTTGGTGG+AGG | 0.596016 | 4_2:+74874513 | None:intergenic |
| ACTTTCTGAAGCAGCCAACA+AGG | 0.599002 | 4_2:+74873187 | None:intergenic |
| AAGGTGCTTCAAAGAAGCGC+AGG | 0.614369 | 4_2:-74873020 | Msa0622440:CDS |
| AAGTTTCCTTACCTGCTCTG+AGG | 0.620871 | 4_2:-74873538 | Msa0622440:CDS |
| AAACTAACATGATAGAGCGA+AGG | 0.636224 | 4_2:+74874424 | None:intergenic |
| CATTCAATTGAATAATAATG+GGG | 0.641084 | 4_2:-74874584 | Msa0622440:exon |
| AACATCTCACACAGATACAG+TGG | 0.671663 | 4_2:-74872805 | Msa0622440:three_prime_UTR |
| AGCTAAAATGATGTCAGCCG+GGG | 0.678842 | 4_2:+74872967 | None:intergenic |
| AGCATCATCTACCAGTACCA+AGG | 0.693429 | 4_2:-74873039 | Msa0622440:CDS |
| TGTTTGTGTGCGTGTAAACG+AGG | 0.696253 | 4_2:+74874616 | None:intergenic |
| GACACTGCCTAAGACTTACG+AGG | 0.727290 | 4_2:+74873067 | None:intergenic |
| TCGCTGATACTCCTCAAACG+CGG | 0.736711 | 4_2:+74873143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAACATAAAATTAGA+AGG | + | chr4_2:74874140-74874159 | None:intergenic | 10.0% |
| !! | TATAAAAACATAAAATTAGA+AGG | + | chr4_2:74874140-74874159 | None:intergenic | 10.0% |
| !! | ACATTCAATTGAATAATAAT+GGG | - | chr4_2:74872822-74872841 | Msa0622440:three_prime_UTR | 15.0% |
| !! | CATTAGAATTATAGAATTAT+AGG | + | chr4_2:74874164-74874183 | None:intergenic | 15.0% |
| !!! | ACATATATTTTTTTATTCAG+CGG | - | chr4_2:74874632-74874651 | Msa0622440:five_prime_UTR | 15.0% |
| !! | ACATTCAATTGAATAATAAT+GGG | - | chr4_2:74872822-74872841 | Msa0622440:three_prime_UTR | 15.0% |
| !! | CATTAGAATTATAGAATTAT+AGG | + | chr4_2:74874164-74874183 | None:intergenic | 15.0% |
| !!! | ACATATATTTTTTTATTCAG+CGG | - | chr4_2:74874632-74874651 | Msa0622440:five_prime_UTR | 15.0% |
| !! | CACATTCAATTGAATAATAA+TGG | - | chr4_2:74872821-74872840 | Msa0622440:three_prime_UTR | 20.0% |
| !! | CATTCAATTGAATAATAATG+GGG | - | chr4_2:74872823-74872842 | Msa0622440:three_prime_UTR | 20.0% |
| !!! | AATATTCGTCTTTTTCAATT+TGG | - | chr4_2:74873137-74873156 | Msa0622440:CDS | 20.0% |
| !!! | TGTTTGTAACTTTATTCTTT+TGG | - | chr4_2:74873345-74873364 | Msa0622440:CDS | 20.0% |
| !! | TTTGAAGGAAATTAGATTAT+GGG | - | chr4_2:74873469-74873488 | Msa0622440:intron | 20.0% |
| !! | AGTTTATCATAAATATGAGT+TGG | - | chr4_2:74873719-74873738 | Msa0622440:intron | 20.0% |
| !! | CACATTCAATTGAATAATAA+TGG | - | chr4_2:74872821-74872840 | Msa0622440:three_prime_UTR | 20.0% |
| !! | CATTCAATTGAATAATAATG+GGG | - | chr4_2:74872823-74872842 | Msa0622440:three_prime_UTR | 20.0% |
| !!! | AATATTCGTCTTTTTCAATT+TGG | - | chr4_2:74873137-74873156 | Msa0622440:CDS | 20.0% |
| !!! | TGTTTGTAACTTTATTCTTT+TGG | - | chr4_2:74873345-74873364 | Msa0622440:CDS | 20.0% |
| !! | TTTGAAGGAAATTAGATTAT+GGG | - | chr4_2:74873469-74873488 | Msa0622440:intron | 20.0% |
| !! | AGTTTATCATAAATATGAGT+TGG | - | chr4_2:74873719-74873738 | Msa0622440:intron | 20.0% |
| ! | AAAAAAAAACGGTTCTTGAA+AGG | + | chr4_2:74873016-74873035 | None:intergenic | 25.0% |
| !! | TGCTATTTGAATGTTGTTTA+AGG | - | chr4_2:74873221-74873240 | Msa0622440:intron | 25.0% |
| ! | GGTTTGTGATTAATTGAAAT+AGG | - | chr4_2:74873242-74873261 | Msa0622440:intron | 25.0% |
| !!! | AACTTTATTCTTTTGGTGAT+TGG | - | chr4_2:74873352-74873371 | Msa0622440:CDS | 25.0% |
| !! | GAAATTTTCCTTAAAAAGTC+CGG | + | chr4_2:74873393-74873412 | None:intergenic | 25.0% |
| ! | TTATGTGATTGTTTGTTTGA+AGG | - | chr4_2:74873454-74873473 | Msa0622440:intron | 25.0% |
| ! | GTTTGAAGGAAATTAGATTA+TGG | - | chr4_2:74873468-74873487 | Msa0622440:intron | 25.0% |
| ! | TTAGATTATGGGTTTATGTT+TGG | - | chr4_2:74873480-74873499 | Msa0622440:intron | 25.0% |
| !! | GTTTCTATTTTCTTAACTAG+TGG | - | chr4_2:74873650-74873669 | Msa0622440:intron | 25.0% |
| ! | TTTAGTTATTGTCATGTTTG+TGG | - | chr4_2:74873743-74873762 | Msa0622440:intron | 25.0% |
| ! | GTCAATAATTCCAATAACAA+AGG | + | chr4_2:74873823-74873842 | None:intergenic | 25.0% |
| ! | TTGCAAATTTATCATCTCAT+TGG | - | chr4_2:74874107-74874126 | Msa0622440:intron | 25.0% |
| ! | AATTCTACCCAATCAAATAA+TGG | + | chr4_2:74874482-74874501 | None:intergenic | 25.0% |
| ! | TGAGTTATGAGATTAATTGT+AGG | - | chr4_2:74874656-74874675 | Msa0622440:five_prime_UTR | 25.0% |
| ! | AAAAAAAAACGGTTCTTGAA+AGG | + | chr4_2:74873016-74873035 | None:intergenic | 25.0% |
| !! | TGCTATTTGAATGTTGTTTA+AGG | - | chr4_2:74873221-74873240 | Msa0622440:intron | 25.0% |
| ! | GGTTTGTGATTAATTGAAAT+AGG | - | chr4_2:74873242-74873261 | Msa0622440:intron | 25.0% |
| !!! | AACTTTATTCTTTTGGTGAT+TGG | - | chr4_2:74873352-74873371 | Msa0622440:CDS | 25.0% |
| !! | GAAATTTTCCTTAAAAAGTC+CGG | + | chr4_2:74873393-74873412 | None:intergenic | 25.0% |
| ! | TTATGTGATTGTTTGTTTGA+AGG | - | chr4_2:74873454-74873473 | Msa0622440:intron | 25.0% |
| ! | GTTTGAAGGAAATTAGATTA+TGG | - | chr4_2:74873468-74873487 | Msa0622440:intron | 25.0% |
| ! | TTAGATTATGGGTTTATGTT+TGG | - | chr4_2:74873480-74873499 | Msa0622440:intron | 25.0% |
| !! | GTTTCTATTTTCTTAACTAG+TGG | - | chr4_2:74873650-74873669 | Msa0622440:intron | 25.0% |
| ! | TTTAGTTATTGTCATGTTTG+TGG | - | chr4_2:74873743-74873762 | Msa0622440:intron | 25.0% |
| ! | GTCAATAATTCCAATAACAA+AGG | + | chr4_2:74873823-74873842 | None:intergenic | 25.0% |
| ! | TTGCAAATTTATCATCTCAT+TGG | - | chr4_2:74874107-74874126 | Msa0622440:intron | 25.0% |
| ! | AATTCTACCCAATCAAATAA+TGG | + | chr4_2:74874482-74874501 | None:intergenic | 25.0% |
| ! | TGAGTTATGAGATTAATTGT+AGG | - | chr4_2:74874656-74874675 | Msa0622440:five_prime_UTR | 25.0% |
| ATAAATGCAATCTTCAACCA+TGG | + | chr4_2:74872913-74872932 | None:intergenic | 30.0% | |
| TAAGAACTCCAAATTCTCTT+CGG | + | chr4_2:74873108-74873127 | None:intergenic | 30.0% | |
| ! | AGAGAATTTGGAGTTCTTAA+AGG | - | chr4_2:74873109-74873128 | Msa0622440:CDS | 30.0% |
| !!! | TCTTTTTCAATTTGGAATCG+AGG | - | chr4_2:74873145-74873164 | Msa0622440:CDS | 30.0% |
| !!! | CTTTTTCAATTTGGAATCGA+GGG | - | chr4_2:74873146-74873165 | Msa0622440:CDS | 30.0% |
| ATTATGGGTTTATGTTTGGT+TGG | - | chr4_2:74873484-74873503 | Msa0622440:intron | 30.0% | |
| ! | TTATGTTTGGTTGGCTATTT+AGG | - | chr4_2:74873493-74873512 | Msa0622440:intron | 30.0% |
| ! | TATGTTTGGTTGGCTATTTA+GGG | - | chr4_2:74873494-74873513 | Msa0622440:intron | 30.0% |
| ! | ATCTCGAAATTTTCATGAAG+TGG | - | chr4_2:74873570-74873589 | Msa0622440:intron | 30.0% |
| ! | ATTATGAAGTTTGAAGCATG+TGG | - | chr4_2:74873769-74873788 | Msa0622440:intron | 30.0% |
| ! | TCTGAAAGCACACATAATTA+AGG | + | chr4_2:74874032-74874051 | None:intergenic | 30.0% |
| GTTTGCAATGAACCAAAATA+GGG | + | chr4_2:74874067-74874086 | None:intergenic | 30.0% | |
| TGTTTGCAATGAACCAAAAT+AGG | + | chr4_2:74874068-74874087 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTCATTGCAAACA+AGG | - | chr4_2:74874068-74874087 | Msa0622440:intron | 30.0% |
| ! | TTTTCATCTTTATGCAGCAT+AGG | - | chr4_2:74874189-74874208 | Msa0622440:intron | 30.0% |
| CGGATTTAACATTTATAGAG+AGG | - | chr4_2:74874312-74874331 | Msa0622440:CDS | 30.0% | |
| TTCCAACTCCATTATTTGAT+TGG | - | chr4_2:74874471-74874490 | Msa0622440:CDS | 30.0% | |
| TCCAACTCCATTATTTGATT+GGG | - | chr4_2:74874472-74874491 | Msa0622440:CDS | 30.0% | |
| TATACTTCAAAGTAGTTGCT+TGG | - | chr4_2:74874502-74874521 | Msa0622440:CDS | 30.0% | |
| GACTGAACATTATTATCCTT+AGG | - | chr4_2:74874528-74874547 | Msa0622440:CDS | 30.0% | |
| ! | AAAGATCTTTGAAAAGCCTA+AGG | + | chr4_2:74874547-74874566 | None:intergenic | 30.0% |
| ATAAATGCAATCTTCAACCA+TGG | + | chr4_2:74872913-74872932 | None:intergenic | 30.0% | |
| TAAGAACTCCAAATTCTCTT+CGG | + | chr4_2:74873108-74873127 | None:intergenic | 30.0% | |
| ! | AGAGAATTTGGAGTTCTTAA+AGG | - | chr4_2:74873109-74873128 | Msa0622440:CDS | 30.0% |
| !!! | TCTTTTTCAATTTGGAATCG+AGG | - | chr4_2:74873145-74873164 | Msa0622440:CDS | 30.0% |
| !!! | CTTTTTCAATTTGGAATCGA+GGG | - | chr4_2:74873146-74873165 | Msa0622440:CDS | 30.0% |
| ATTATGGGTTTATGTTTGGT+TGG | - | chr4_2:74873484-74873503 | Msa0622440:intron | 30.0% | |
| ! | TTATGTTTGGTTGGCTATTT+AGG | - | chr4_2:74873493-74873512 | Msa0622440:intron | 30.0% |
| ! | TATGTTTGGTTGGCTATTTA+GGG | - | chr4_2:74873494-74873513 | Msa0622440:intron | 30.0% |
| ! | ATCTCGAAATTTTCATGAAG+TGG | - | chr4_2:74873570-74873589 | Msa0622440:intron | 30.0% |
| ! | ATTATGAAGTTTGAAGCATG+TGG | - | chr4_2:74873769-74873788 | Msa0622440:intron | 30.0% |
| ! | TCTGAAAGCACACATAATTA+AGG | + | chr4_2:74874032-74874051 | None:intergenic | 30.0% |
| GTTTGCAATGAACCAAAATA+GGG | + | chr4_2:74874067-74874086 | None:intergenic | 30.0% | |
| TGTTTGCAATGAACCAAAAT+AGG | + | chr4_2:74874068-74874087 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTCATTGCAAACA+AGG | - | chr4_2:74874068-74874087 | Msa0622440:intron | 30.0% |
| ! | TTTTCATCTTTATGCAGCAT+AGG | - | chr4_2:74874189-74874208 | Msa0622440:intron | 30.0% |
| CGGATTTAACATTTATAGAG+AGG | - | chr4_2:74874312-74874331 | Msa0622440:CDS | 30.0% | |
| TTCCAACTCCATTATTTGAT+TGG | - | chr4_2:74874471-74874490 | Msa0622440:CDS | 30.0% | |
| TCCAACTCCATTATTTGATT+GGG | - | chr4_2:74874472-74874491 | Msa0622440:CDS | 30.0% | |
| TATACTTCAAAGTAGTTGCT+TGG | - | chr4_2:74874502-74874521 | Msa0622440:CDS | 30.0% | |
| GACTGAACATTATTATCCTT+AGG | - | chr4_2:74874528-74874547 | Msa0622440:CDS | 30.0% | |
| ! | AAAGATCTTTGAAAAGCCTA+AGG | + | chr4_2:74874547-74874566 | None:intergenic | 30.0% |
| TCTTCAACCATGGAGAAATT+TGG | + | chr4_2:74872903-74872922 | None:intergenic | 35.0% | |
| AAACTAACATGATAGAGCGA+AGG | + | chr4_2:74872986-74873005 | None:intergenic | 35.0% | |
| AAGAACTCCAAATTCTCTTC+GGG | + | chr4_2:74873107-74873126 | None:intergenic | 35.0% | |
| ! | AATGCTAAAAAGTGTGTCTG+AGG | - | chr4_2:74873529-74873548 | Msa0622440:CDS | 35.0% |
| TTTCATGAAGTGGTGAAAAG+TGG | - | chr4_2:74873580-74873599 | Msa0622440:intron | 35.0% | |
| ! | ATTTTCTTAACTAGTGGCCA+TGG | - | chr4_2:74873656-74873675 | Msa0622440:intron | 35.0% |
| AGTTATTGTCATGTTTGTGG+AGG | - | chr4_2:74873746-74873765 | Msa0622440:intron | 35.0% | |
| CAAAGGGCAAATAACACATA+GGG | + | chr4_2:74873845-74873864 | None:intergenic | 35.0% | |
| !!! | GAGGCTTTGAAAGTTTTAGT+TGG | - | chr4_2:74873904-74873923 | Msa0622440:intron | 35.0% |
| ! | TGTGAGAAATCACCCTATTT+TGG | - | chr4_2:74874052-74874071 | Msa0622440:intron | 35.0% |
| ! | ATTTGCTGGTGTTAAATCCA+GGG | - | chr4_2:74874286-74874305 | Msa0622440:CDS | 35.0% |
| GACTCTGTAAATTCTCATCT+TGG | + | chr4_2:74874421-74874440 | None:intergenic | 35.0% | |
| ! | ACCCAATCAAATAATGGAGT+TGG | + | chr4_2:74874476-74874495 | None:intergenic | 35.0% |
| TCTTCAACCATGGAGAAATT+TGG | + | chr4_2:74872903-74872922 | None:intergenic | 35.0% | |
| AAACTAACATGATAGAGCGA+AGG | + | chr4_2:74872986-74873005 | None:intergenic | 35.0% | |
| AAGAACTCCAAATTCTCTTC+GGG | + | chr4_2:74873107-74873126 | None:intergenic | 35.0% | |
| ! | AATGCTAAAAAGTGTGTCTG+AGG | - | chr4_2:74873529-74873548 | Msa0622440:CDS | 35.0% |
| TTTCATGAAGTGGTGAAAAG+TGG | - | chr4_2:74873580-74873599 | Msa0622440:intron | 35.0% | |
| ! | ATTTTCTTAACTAGTGGCCA+TGG | - | chr4_2:74873656-74873675 | Msa0622440:intron | 35.0% |
| AGTTATTGTCATGTTTGTGG+AGG | - | chr4_2:74873746-74873765 | Msa0622440:intron | 35.0% | |
| CAAAGGGCAAATAACACATA+GGG | + | chr4_2:74873845-74873864 | None:intergenic | 35.0% | |
| !!! | GAGGCTTTGAAAGTTTTAGT+TGG | - | chr4_2:74873904-74873923 | Msa0622440:intron | 35.0% |
| ! | TGTGAGAAATCACCCTATTT+TGG | - | chr4_2:74874052-74874071 | Msa0622440:intron | 35.0% |
| ! | ATTTGCTGGTGTTAAATCCA+GGG | - | chr4_2:74874286-74874305 | Msa0622440:CDS | 35.0% |
| GACTCTGTAAATTCTCATCT+TGG | + | chr4_2:74874421-74874440 | None:intergenic | 35.0% | |
| ! | ACCCAATCAAATAATGGAGT+TGG | + | chr4_2:74874476-74874495 | None:intergenic | 35.0% |
| TGTAAACGAGGATTCGGATT+CGG | + | chr4_2:74872782-74872801 | None:intergenic | 40.0% | |
| TCAACCATGGAGAAATTTGG+TGG | + | chr4_2:74872900-74872919 | None:intergenic | 40.0% | |
| AAGGGAAAACTGGAAGGTTT+AGG | + | chr4_2:74872948-74872967 | None:intergenic | 40.0% | |
| TGAAGAAAGGGAAAACTGGA+AGG | + | chr4_2:74872954-74872973 | None:intergenic | 40.0% | |
| GGTTTGAAGAAAGGGAAAAC+TGG | + | chr4_2:74872958-74872977 | None:intergenic | 40.0% | |
| AGGTTGAGGGTTTGAAGAAA+GGG | + | chr4_2:74872966-74872985 | None:intergenic | 40.0% | |
| AAGGTTGAGGGTTTGAAGAA+AGG | + | chr4_2:74872967-74872986 | None:intergenic | 40.0% | |
| TCCAAATTCTCTTCGGGATA+GGG | + | chr4_2:74873101-74873120 | None:intergenic | 40.0% | |
| ! | ATTTGGAATCGAGGGCAAAA+CGG | - | chr4_2:74873154-74873173 | Msa0622440:CDS | 40.0% |
| !! | TTGGTCTTTTACCTTTGTGC+CGG | - | chr4_2:74873371-74873390 | Msa0622440:intron | 40.0% |
| ! | TTGGTTGGCTATTTAGGGTT+CGG | - | chr4_2:74873499-74873518 | Msa0622440:intron | 40.0% |
| AATTTCCCTTTCCTTTACCG+AGG | + | chr4_2:74873696-74873715 | None:intergenic | 40.0% | |
| CGGTAAAGGAAAGGGAAATT+TGG | - | chr4_2:74873696-74873715 | Msa0622440:intron | 40.0% | |
| ! | GTTTCGTCTGCCTTTGTTAT+TGG | - | chr4_2:74873810-74873829 | Msa0622440:intron | 40.0% |
| GCAAAGGGCAAATAACACAT+AGG | + | chr4_2:74873846-74873865 | None:intergenic | 40.0% | |
| !! | ATGTGTTATTTGCCCTTTGC+AGG | - | chr4_2:74873846-74873865 | Msa0622440:intron | 40.0% |
| GTAAGGAAACTTCCTGCAAA+GGG | + | chr4_2:74873861-74873880 | None:intergenic | 40.0% | |
| ATAATAGAATCCCTCAGAGC+AGG | + | chr4_2:74873883-74873902 | None:intergenic | 40.0% | |
| !! | TGCTCTGAGGGATTCTATTA+TGG | - | chr4_2:74873882-74873901 | Msa0622440:intron | 40.0% |
| TCTGAGGGATTCTATTATGG+AGG | - | chr4_2:74873885-74873904 | Msa0622440:intron | 40.0% | |
| GGTTCATTGCAAACAAGGAA+AGG | - | chr4_2:74874073-74874092 | Msa0622440:intron | 40.0% | |
| ATCTTTATGCAGCATAGGAC+AGG | - | chr4_2:74874194-74874213 | Msa0622440:intron | 40.0% | |
| GCTTCAGAAAGTTGCAGAAT+TGG | - | chr4_2:74874231-74874250 | Msa0622440:intron | 40.0% | |
| !! | GATTTGCTGGTGTTAAATCC+AGG | - | chr4_2:74874285-74874304 | Msa0622440:CDS | 40.0% |
| ATGAGAATTTACAGAGTCCC+CGG | - | chr4_2:74874423-74874442 | Msa0622440:intron | 40.0% | |
| !!! | TGACATCATTTTAGCTGCAC+CGG | - | chr4_2:74874447-74874466 | Msa0622440:CDS | 40.0% |
| ! | CAAATAATGGAGTTGGAACC+CGG | + | chr4_2:74874469-74874488 | None:intergenic | 40.0% |
| AACATCTCACACAGATACAG+TGG | - | chr4_2:74874602-74874621 | Msa0622440:five_prime_UTR | 40.0% | |
| TGTAAACGAGGATTCGGATT+CGG | + | chr4_2:74872782-74872801 | None:intergenic | 40.0% | |
| TCAACCATGGAGAAATTTGG+TGG | + | chr4_2:74872900-74872919 | None:intergenic | 40.0% | |
| AAGGGAAAACTGGAAGGTTT+AGG | + | chr4_2:74872948-74872967 | None:intergenic | 40.0% | |
| TGAAGAAAGGGAAAACTGGA+AGG | + | chr4_2:74872954-74872973 | None:intergenic | 40.0% | |
| GGTTTGAAGAAAGGGAAAAC+TGG | + | chr4_2:74872958-74872977 | None:intergenic | 40.0% | |
| AGGTTGAGGGTTTGAAGAAA+GGG | + | chr4_2:74872966-74872985 | None:intergenic | 40.0% | |
| AAGGTTGAGGGTTTGAAGAA+AGG | + | chr4_2:74872967-74872986 | None:intergenic | 40.0% | |
| TCCAAATTCTCTTCGGGATA+GGG | + | chr4_2:74873101-74873120 | None:intergenic | 40.0% | |
| ! | ATTTGGAATCGAGGGCAAAA+CGG | - | chr4_2:74873154-74873173 | Msa0622440:CDS | 40.0% |
| !! | TTGGTCTTTTACCTTTGTGC+CGG | - | chr4_2:74873371-74873390 | Msa0622440:intron | 40.0% |
| ! | TTGGTTGGCTATTTAGGGTT+CGG | - | chr4_2:74873499-74873518 | Msa0622440:intron | 40.0% |
| AATTTCCCTTTCCTTTACCG+AGG | + | chr4_2:74873696-74873715 | None:intergenic | 40.0% | |
| CGGTAAAGGAAAGGGAAATT+TGG | - | chr4_2:74873696-74873715 | Msa0622440:intron | 40.0% | |
| ! | GTTTCGTCTGCCTTTGTTAT+TGG | - | chr4_2:74873810-74873829 | Msa0622440:intron | 40.0% |
| GCAAAGGGCAAATAACACAT+AGG | + | chr4_2:74873846-74873865 | None:intergenic | 40.0% | |
| !! | ATGTGTTATTTGCCCTTTGC+AGG | - | chr4_2:74873846-74873865 | Msa0622440:intron | 40.0% |
| GTAAGGAAACTTCCTGCAAA+GGG | + | chr4_2:74873861-74873880 | None:intergenic | 40.0% | |
| ATAATAGAATCCCTCAGAGC+AGG | + | chr4_2:74873883-74873902 | None:intergenic | 40.0% | |
| !! | TGCTCTGAGGGATTCTATTA+TGG | - | chr4_2:74873882-74873901 | Msa0622440:intron | 40.0% |
| TCTGAGGGATTCTATTATGG+AGG | - | chr4_2:74873885-74873904 | Msa0622440:intron | 40.0% | |
| GGTTCATTGCAAACAAGGAA+AGG | - | chr4_2:74874073-74874092 | Msa0622440:intron | 40.0% | |
| ATCTTTATGCAGCATAGGAC+AGG | - | chr4_2:74874194-74874213 | Msa0622440:intron | 40.0% | |
| GCTTCAGAAAGTTGCAGAAT+TGG | - | chr4_2:74874231-74874250 | Msa0622440:intron | 40.0% | |
| !! | GATTTGCTGGTGTTAAATCC+AGG | - | chr4_2:74874285-74874304 | Msa0622440:CDS | 40.0% |
| ATGAGAATTTACAGAGTCCC+CGG | - | chr4_2:74874423-74874442 | Msa0622440:intron | 40.0% | |
| !!! | TGACATCATTTTAGCTGCAC+CGG | - | chr4_2:74874447-74874466 | Msa0622440:CDS | 40.0% |
| ! | CAAATAATGGAGTTGGAACC+CGG | + | chr4_2:74874469-74874488 | None:intergenic | 40.0% |
| AACATCTCACACAGATACAG+TGG | - | chr4_2:74874602-74874621 | Msa0622440:five_prime_UTR | 40.0% | |
| TGTGCGTGTAAACGAGGATT+CGG | + | chr4_2:74872788-74872807 | None:intergenic | 45.0% | |
| TGTTTGTGTGCGTGTAAACG+AGG | + | chr4_2:74872794-74872813 | None:intergenic | 45.0% | |
| TCCTCCACCAAATTTCTCCA+TGG | - | chr4_2:74872893-74872912 | Msa0622440:three_prime_UTR | 45.0% | |
| ! | ACCATGGAGAAATTTGGTGG+AGG | + | chr4_2:74872897-74872916 | None:intergenic | 45.0% |
| CATGATAGAGCGAAGGTTGA+GGG | + | chr4_2:74872979-74872998 | None:intergenic | 45.0% | |
| ACATGATAGAGCGAAGGTTG+AGG | + | chr4_2:74872980-74872999 | None:intergenic | 45.0% | |
| ACCCTATCCCGAAGAGAATT+TGG | - | chr4_2:74873097-74873116 | Msa0622440:CDS | 45.0% | |
| CTCCAAATTCTCTTCGGGAT+AGG | + | chr4_2:74873102-74873121 | None:intergenic | 45.0% | |
| CCTTAAAAAGTCCGGCACAA+AGG | + | chr4_2:74873385-74873404 | None:intergenic | 45.0% | |
| ! | CCTTTGTGCCGGACTTTTTA+AGG | - | chr4_2:74873382-74873401 | Msa0622440:intron | 45.0% |
| ! | TGGTTGGCTATTTAGGGTTC+GGG | - | chr4_2:74873500-74873519 | Msa0622440:intron | 45.0% |
| ! | AGGCATGCTAACTTGTACCA+TGG | + | chr4_2:74873676-74873695 | None:intergenic | 45.0% |
| TGGTACAAGTTAGCATGCCT+CGG | - | chr4_2:74873676-74873695 | Msa0622440:intron | 45.0% | |
| AAGTTAGCATGCCTCGGTAA+AGG | - | chr4_2:74873682-74873701 | Msa0622440:intron | 45.0% | |
| ! | GTGGATTCTTGACCGAGTTT+TGG | - | chr4_2:74873788-74873807 | Msa0622440:intron | 45.0% |
| AGGCAGACGAAACCAAAACT+CGG | + | chr4_2:74873803-74873822 | None:intergenic | 45.0% | |
| GGTAAGGAAACTTCCTGCAA+AGG | + | chr4_2:74873862-74873881 | None:intergenic | 45.0% | |
| AAGTTTCCTTACCTGCTCTG+AGG | - | chr4_2:74873869-74873888 | Msa0622440:intron | 45.0% | |
| AGTTTCCTTACCTGCTCTGA+GGG | - | chr4_2:74873870-74873889 | Msa0622440:intron | 45.0% | |
| !! | ACTTTCTGAAGCAGCCAACA+AGG | + | chr4_2:74874223-74874242 | None:intergenic | 45.0% |
| AAATGTTAAATCCGCTGCCC+TGG | + | chr4_2:74874306-74874325 | None:intergenic | 45.0% | |
| GGTTTGACCTCGTAAGTCTT+AGG | - | chr4_2:74874333-74874352 | Msa0622440:intron | 45.0% | |
| AGCATCATCTACCAGTACCA+AGG | - | chr4_2:74874368-74874387 | Msa0622440:intron | 45.0% | |
| !! | TCTTTGAAGCACCTTGGTAC+TGG | + | chr4_2:74874382-74874401 | None:intergenic | 45.0% |
| AGCTAAAATGATGTCAGCCG+GGG | + | chr4_2:74874443-74874462 | None:intergenic | 45.0% | |
| CAGCTAAAATGATGTCAGCC+GGG | + | chr4_2:74874444-74874463 | None:intergenic | 45.0% | |
| GCAGCTAAAATGATGTCAGC+CGG | + | chr4_2:74874445-74874464 | None:intergenic | 45.0% | |
| !!! | GACATCATTTTAGCTGCACC+GGG | - | chr4_2:74874448-74874467 | Msa0622440:CDS | 45.0% |
| TGTGCGTGTAAACGAGGATT+CGG | + | chr4_2:74872788-74872807 | None:intergenic | 45.0% | |
| TGTTTGTGTGCGTGTAAACG+AGG | + | chr4_2:74872794-74872813 | None:intergenic | 45.0% | |
| TCCTCCACCAAATTTCTCCA+TGG | - | chr4_2:74872893-74872912 | Msa0622440:three_prime_UTR | 45.0% | |
| ! | ACCATGGAGAAATTTGGTGG+AGG | + | chr4_2:74872897-74872916 | None:intergenic | 45.0% |
| CATGATAGAGCGAAGGTTGA+GGG | + | chr4_2:74872979-74872998 | None:intergenic | 45.0% | |
| ACATGATAGAGCGAAGGTTG+AGG | + | chr4_2:74872980-74872999 | None:intergenic | 45.0% | |
| ACCCTATCCCGAAGAGAATT+TGG | - | chr4_2:74873097-74873116 | Msa0622440:CDS | 45.0% | |
| CTCCAAATTCTCTTCGGGAT+AGG | + | chr4_2:74873102-74873121 | None:intergenic | 45.0% | |
| CCTTAAAAAGTCCGGCACAA+AGG | + | chr4_2:74873385-74873404 | None:intergenic | 45.0% | |
| ! | CCTTTGTGCCGGACTTTTTA+AGG | - | chr4_2:74873382-74873401 | Msa0622440:intron | 45.0% |
| ! | TGGTTGGCTATTTAGGGTTC+GGG | - | chr4_2:74873500-74873519 | Msa0622440:intron | 45.0% |
| ! | AGGCATGCTAACTTGTACCA+TGG | + | chr4_2:74873676-74873695 | None:intergenic | 45.0% |
| TGGTACAAGTTAGCATGCCT+CGG | - | chr4_2:74873676-74873695 | Msa0622440:intron | 45.0% | |
| AAGTTAGCATGCCTCGGTAA+AGG | - | chr4_2:74873682-74873701 | Msa0622440:intron | 45.0% | |
| ! | GTGGATTCTTGACCGAGTTT+TGG | - | chr4_2:74873788-74873807 | Msa0622440:intron | 45.0% |
| AGGCAGACGAAACCAAAACT+CGG | + | chr4_2:74873803-74873822 | None:intergenic | 45.0% | |
| GGTAAGGAAACTTCCTGCAA+AGG | + | chr4_2:74873862-74873881 | None:intergenic | 45.0% | |
| AAGTTTCCTTACCTGCTCTG+AGG | - | chr4_2:74873869-74873888 | Msa0622440:intron | 45.0% | |
| AGTTTCCTTACCTGCTCTGA+GGG | - | chr4_2:74873870-74873889 | Msa0622440:intron | 45.0% | |
| !! | ACTTTCTGAAGCAGCCAACA+AGG | + | chr4_2:74874223-74874242 | None:intergenic | 45.0% |
| AAATGTTAAATCCGCTGCCC+TGG | + | chr4_2:74874306-74874325 | None:intergenic | 45.0% | |
| GGTTTGACCTCGTAAGTCTT+AGG | - | chr4_2:74874333-74874352 | Msa0622440:intron | 45.0% | |
| AGCATCATCTACCAGTACCA+AGG | - | chr4_2:74874368-74874387 | Msa0622440:intron | 45.0% | |
| !! | TCTTTGAAGCACCTTGGTAC+TGG | + | chr4_2:74874382-74874401 | None:intergenic | 45.0% |
| AGCTAAAATGATGTCAGCCG+GGG | + | chr4_2:74874443-74874462 | None:intergenic | 45.0% | |
| CAGCTAAAATGATGTCAGCC+GGG | + | chr4_2:74874444-74874463 | None:intergenic | 45.0% | |
| GCAGCTAAAATGATGTCAGC+CGG | + | chr4_2:74874445-74874464 | None:intergenic | 45.0% | |
| !!! | GACATCATTTTAGCTGCACC+GGG | - | chr4_2:74874448-74874467 | Msa0622440:CDS | 45.0% |
| !! | ATAATAAACAAAAAAAAAAA+CGG | + | chr4_2:74873027-74873046 | None:intergenic | 5.0% |
| !!! | TTTATATATTTTTTTAAGTT+TGG | - | chr4_2:74873977-74873996 | Msa0622440:intron | 5.0% |
| !! | ATAATAAACAAAAAAAAAAA+CGG | + | chr4_2:74873027-74873046 | None:intergenic | 5.0% |
| !!! | TTTATATATTTTTTTAAGTT+TGG | - | chr4_2:74873977-74873996 | Msa0622440:intron | 5.0% |
| TTCTCTTCGGGATAGGGTTC+AGG | + | chr4_2:74873095-74873114 | None:intergenic | 50.0% | |
| ! | TGGCTATTTAGGGTTCGGGA+TGG | - | chr4_2:74873504-74873523 | Msa0622440:CDS | 50.0% |
| ! | GGCTATTTAGGGTTCGGGAT+GGG | - | chr4_2:74873505-74873524 | Msa0622440:CDS | 50.0% |
| ! | GCTATTTAGGGTTCGGGATG+GGG | - | chr4_2:74873506-74873525 | Msa0622440:CDS | 50.0% |
| AGCATGCCTCGGTAAAGGAA+AGG | - | chr4_2:74873687-74873706 | Msa0622440:intron | 50.0% | |
| GCATGCCTCGGTAAAGGAAA+GGG | - | chr4_2:74873688-74873707 | Msa0622440:intron | 50.0% | |
| AGAATCCCTCAGAGCAGGTA+AGG | + | chr4_2:74873878-74873897 | None:intergenic | 50.0% | |
| CATAGGACAGGTTGCCTTGT+TGG | - | chr4_2:74874206-74874225 | Msa0622440:intron | 50.0% | |
| GTGTTTGTCTTCCGCGTTTG+AGG | - | chr4_2:74874253-74874272 | Msa0622440:intron | 50.0% | |
| TCGCTGATACTCCTCAAACG+CGG | + | chr4_2:74874267-74874286 | None:intergenic | 50.0% | |
| !! | GAGGAGTATCAGCGATTTGC+TGG | - | chr4_2:74874272-74874291 | Msa0622440:CDS | 50.0% |
| ! | TGGTGTTAAATCCAGGGCAG+CGG | - | chr4_2:74874292-74874311 | Msa0622440:CDS | 50.0% |
| GACACTGCCTAAGACTTACG+AGG | + | chr4_2:74874343-74874362 | None:intergenic | 50.0% | |
| !! | TGCGCTTCTTTGAAGCACCT+TGG | + | chr4_2:74874388-74874407 | None:intergenic | 50.0% |
| ! | AAGGTGCTTCAAAGAAGCGC+AGG | - | chr4_2:74874387-74874406 | Msa0622440:intron | 50.0% |
| TTCTCTTCGGGATAGGGTTC+AGG | + | chr4_2:74873095-74873114 | None:intergenic | 50.0% | |
| ! | TGGCTATTTAGGGTTCGGGA+TGG | - | chr4_2:74873504-74873523 | Msa0622440:CDS | 50.0% |
| ! | GGCTATTTAGGGTTCGGGAT+GGG | - | chr4_2:74873505-74873524 | Msa0622440:CDS | 50.0% |
| ! | GCTATTTAGGGTTCGGGATG+GGG | - | chr4_2:74873506-74873525 | Msa0622440:CDS | 50.0% |
| AGCATGCCTCGGTAAAGGAA+AGG | - | chr4_2:74873687-74873706 | Msa0622440:intron | 50.0% | |
| GCATGCCTCGGTAAAGGAAA+GGG | - | chr4_2:74873688-74873707 | Msa0622440:intron | 50.0% | |
| AGAATCCCTCAGAGCAGGTA+AGG | + | chr4_2:74873878-74873897 | None:intergenic | 50.0% | |
| CATAGGACAGGTTGCCTTGT+TGG | - | chr4_2:74874206-74874225 | Msa0622440:intron | 50.0% | |
| GTGTTTGTCTTCCGCGTTTG+AGG | - | chr4_2:74874253-74874272 | Msa0622440:intron | 50.0% | |
| TCGCTGATACTCCTCAAACG+CGG | + | chr4_2:74874267-74874286 | None:intergenic | 50.0% | |
| !! | GAGGAGTATCAGCGATTTGC+TGG | - | chr4_2:74874272-74874291 | Msa0622440:CDS | 50.0% |
| ! | TGGTGTTAAATCCAGGGCAG+CGG | - | chr4_2:74874292-74874311 | Msa0622440:CDS | 50.0% |
| GACACTGCCTAAGACTTACG+AGG | + | chr4_2:74874343-74874362 | None:intergenic | 50.0% | |
| !! | TGCGCTTCTTTGAAGCACCT+TGG | + | chr4_2:74874388-74874407 | None:intergenic | 50.0% |
| ! | AAGGTGCTTCAAAGAAGCGC+AGG | - | chr4_2:74874387-74874406 | Msa0622440:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74872745 | 74874684 | 74872745 | ID=Msa0622440;Name=Msa0622440 |
| chr4_2 | mRNA | 74872745 | 74874684 | 74872745 | ID=Msa0622440-mRNA-1;Parent=Msa0622440;Name=Msa0622440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=95|1|1|1|1|1|5|224|202 |
| chr4_2 | exon | 74872745 | 74873223 | 74872745 | ID=Msa0622440-mRNA-1:exon:22685;Parent=Msa0622440-mRNA-1 |
| chr4_2 | exon | 74873335 | 74873378 | 74873335 | ID=Msa0622440-mRNA-1:exon:22684;Parent=Msa0622440-mRNA-1 |
| chr4_2 | exon | 74873504 | 74873561 | 74873504 | ID=Msa0622440-mRNA-1:exon:22683;Parent=Msa0622440-mRNA-1 |
| chr4_2 | exon | 74874254 | 74874347 | 74874254 | ID=Msa0622440-mRNA-1:exon:22682;Parent=Msa0622440-mRNA-1 |
| chr4_2 | exon | 74874432 | 74874684 | 74874432 | ID=Msa0622440-mRNA-1:exon:22681;Parent=Msa0622440-mRNA-1 |
| chr4_2 | five_prime_UTR | 74874590 | 74874684 | 74874590 | ID=Msa0622440-mRNA-1:five_prime_utr;Parent=Msa0622440-mRNA-1 |
| chr4_2 | CDS | 74874432 | 74874589 | 74874432 | ID=Msa0622440-mRNA-1:cds;Parent=Msa0622440-mRNA-1 |
| chr4_2 | CDS | 74874254 | 74874347 | 74874254 | ID=Msa0622440-mRNA-1:cds;Parent=Msa0622440-mRNA-1 |
| chr4_2 | CDS | 74873504 | 74873561 | 74873504 | ID=Msa0622440-mRNA-1:cds;Parent=Msa0622440-mRNA-1 |
| chr4_2 | CDS | 74873335 | 74873378 | 74873335 | ID=Msa0622440-mRNA-1:cds;Parent=Msa0622440-mRNA-1 |
| chr4_2 | CDS | 74872969 | 74873223 | 74872969 | ID=Msa0622440-mRNA-1:cds;Parent=Msa0622440-mRNA-1 |
| chr4_2 | three_prime_UTR | 74872745 | 74872968 | 74872745 | ID=Msa0622440-mRNA-1:three_prime_utr;Parent=Msa0622440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
