Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030700 | XP_003624463.1 | 99.299 | 571 | 4 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030700 | sp|Q9LPW7|AFB3_ARATH | 74.177 | 577 | 143 | 2 | 1 | 571 | 1 | 577 | 0.0 | 888 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030700 | G7KW81 | 99.299 | 571 | 4 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0623070 | Msa1030700 | 0.809622 | 1.727805e-50 | -8.615850e-47 |
| Msa0753720 | Msa1030700 | 0.803903 | 2.791758e-49 | -8.615850e-47 |
| Msa0171760 | Msa1030700 | 0.808274 | 3.357351e-50 | -8.615850e-47 |
| Msa1030700 | Msa1120030 | 0.996241 | 4.496658e-225 | -8.615850e-47 |
| Msa1030700 | Msa1148000 | 0.808028 | 3.787529e-50 | -8.615850e-47 |
| Msa1030700 | Msa1221050 | 0.801560 | 8.498988e-49 | -8.615850e-47 |
| Msa0266690 | Msa1030700 | 0.800706 | 1.271017e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030700 | MtrunA17_Chr7g0251831 | 99.299 | 571 | 4 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1172 |
| Msa1030700 | MtrunA17_Chr1g0196061 | 60.000 | 570 | 224 | 3 | 4 | 571 | 14 | 581 | 0.0 | 717 |
| Msa1030700 | MtrunA17_Chr8g0387211 | 55.846 | 573 | 238 | 5 | 6 | 571 | 9 | 573 | 0.0 | 643 |
| Msa1030700 | MtrunA17_Chr4g0048391 | 54.737 | 570 | 249 | 3 | 4 | 571 | 26 | 588 | 0.0 | 635 |
| Msa1030700 | MtrunA17_Chr5g0427061 | 50.433 | 577 | 270 | 6 | 4 | 571 | 47 | 616 | 0.0 | 573 |
| Msa1030700 | MtrunA17_Chr3g0133241 | 50.000 | 576 | 269 | 7 | 8 | 571 | 25 | 593 | 0.0 | 560 |
| Msa1030700 | MtrunA17_Chr5g0436511 | 33.162 | 582 | 361 | 12 | 6 | 571 | 13 | 582 | 1.26e-90 | 290 |
| Msa1030700 | MtrunA17_Chr3g0113151 | 31.525 | 590 | 369 | 13 | 2 | 568 | 13 | 590 | 2.50e-79 | 261 |
| Msa1030700 | MtrunA17_Chr8g0364131 | 29.965 | 564 | 309 | 16 | 28 | 571 | 9 | 506 | 1.07e-61 | 212 |
| Msa1030700 | MtrunA17_Chr5g0439771 | 79.048 | 105 | 17 | 1 | 32 | 131 | 17 | 121 | 1.83e-51 | 172 |
| Msa1030700 | MtrunA17_Chr2g0286991 | 23.746 | 598 | 355 | 20 | 4 | 527 | 11 | 581 | 1.96e-24 | 107 |
| Msa1030700 | MtrunA17_Chr2g0286991 | 24.124 | 485 | 273 | 17 | 56 | 480 | 135 | 584 | 1.69e-15 | 79.7 |
| Msa1030700 | MtrunA17_Chr1g0152951 | 24.402 | 418 | 231 | 11 | 1 | 409 | 61 | 402 | 1.81e-14 | 76.3 |
| Msa1030700 | MtrunA17_Chr4g0053361 | 26.218 | 431 | 243 | 20 | 1 | 398 | 40 | 428 | 1.24e-13 | 73.6 |
| Msa1030700 | MtrunA17_Chr7g0272131 | 22.674 | 516 | 319 | 20 | 3 | 492 | 48 | 509 | 7.20e-12 | 68.2 |
| Msa1030700 | MtrunA17_Chr7g0272131 | 26.537 | 309 | 173 | 11 | 177 | 478 | 361 | 622 | 6.62e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030700 | AT1G12820.1 | 74.177 | 577 | 143 | 2 | 1 | 571 | 1 | 577 | 0.0 | 888 |
| Msa1030700 | AT3G26810.1 | 75.521 | 576 | 135 | 3 | 1 | 571 | 1 | 575 | 0.0 | 886 |
| Msa1030700 | AT3G62980.1 | 59.825 | 570 | 225 | 3 | 4 | 571 | 9 | 576 | 0.0 | 699 |
| Msa1030700 | AT4G03190.1 | 56.491 | 570 | 243 | 3 | 4 | 571 | 5 | 571 | 0.0 | 662 |
| Msa1030700 | AT5G49980.1 | 50.694 | 576 | 270 | 6 | 4 | 571 | 50 | 619 | 0.0 | 569 |
| Msa1030700 | AT4G24390.2 | 49.912 | 569 | 281 | 3 | 6 | 571 | 56 | 623 | 0.0 | 559 |
| Msa1030700 | AT4G24390.1 | 49.912 | 569 | 281 | 3 | 6 | 571 | 56 | 623 | 0.0 | 559 |
| Msa1030700 | AT2G39940.1 | 30.875 | 583 | 374 | 12 | 6 | 571 | 18 | 588 | 1.09e-90 | 291 |
| Msa1030700 | AT4G15475.1 | 24.904 | 522 | 335 | 16 | 2 | 498 | 9 | 498 | 9.22e-26 | 112 |
| Msa1030700 | AT4G15475.1 | 24.868 | 378 | 255 | 12 | 112 | 482 | 231 | 586 | 1.12e-13 | 74.3 |
| Msa1030700 | AT1G47056.1 | 25.616 | 406 | 263 | 16 | 4 | 398 | 43 | 420 | 3.56e-12 | 69.3 |
| Msa1030700 | AT2G25490.1 | 23.583 | 547 | 314 | 23 | 1 | 492 | 64 | 561 | 2.52e-11 | 67.0 |
Find 145 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATTAATATCACCTTTA+AGG | 0.044500 | 7_1:+64881971 | None:intergenic |
| CTTAATTTCGCTTGCCTTAA+AGG | 0.058984 | 7_1:-64881985 | Msa1030700:CDS |
| TCCACAAAAGTTGTGAAATT+TGG | 0.075176 | 7_1:-64883296 | Msa1030700:intron |
| AACCTAAATCGGATAAAATT+TGG | 0.111020 | 7_1:+64881109 | None:intergenic |
| CCTTAAAGGTGATATTAATT+TGG | 0.171878 | 7_1:-64881971 | Msa1030700:CDS |
| GTAAAGAATTGCAAGAATTA+AGG | 0.183750 | 7_1:-64881282 | Msa1030700:CDS |
| TGTTGAAATGTAGGTCTCTT+AGG | 0.191405 | 7_1:-64882095 | Msa1030700:intron |
| AGATGCCTATGCTAAGTTTA+AGG | 0.202777 | 7_1:-64881797 | Msa1030700:CDS |
| GAGCTATGCAGCAGGCATTT+TGG | 0.216244 | 7_1:-64881662 | Msa1030700:CDS |
| CTTCAACTTCATTCTCTTGC+AGG | 0.226329 | 7_1:+64882064 | None:intergenic |
| CTGCTGTTGCTGCCAATTGC+AGG | 0.239726 | 7_1:-64882813 | Msa1030700:intron |
| CAACTAATGGATTTGGGAAT+TGG | 0.245004 | 7_1:-64881844 | Msa1030700:CDS |
| CAGCCACTAGATGAAGGTTT+TGG | 0.253449 | 7_1:-64881046 | Msa1030700:CDS |
| CAAGCGGCTGTTACCGAAAA+AGG | 0.261832 | 7_1:-64881232 | Msa1030700:CDS |
| GTGGGAAACTACAGCGCTTA+TGG | 0.280886 | 7_1:-64881609 | Msa1030700:CDS |
| CTCCTAACCTTAAGAGTCTT+AGG | 0.290388 | 7_1:-64881921 | Msa1030700:CDS |
| AAGCTGTTTGTACTTTGTTT+AGG | 0.298277 | 7_1:-64880513 | Msa1030700:three_prime_UTR |
| AGCACCTCAACTAATGGATT+TGG | 0.298955 | 7_1:-64881851 | Msa1030700:CDS |
| TGCTAAGAATAAGGTTGGTT+TGG | 0.312116 | 7_1:-64882959 | Msa1030700:CDS |
| CTTAAAGGTGATATTAATTT+GGG | 0.314737 | 7_1:-64881970 | Msa1030700:CDS |
| TAGTTTGGTTCCTCATGGTT+GGG | 0.318544 | 7_1:-64883013 | Msa1030700:CDS |
| TGACAGAAACTCTTTGTCTT+TGG | 0.323445 | 7_1:-64883184 | Msa1030700:CDS |
| TAAAGAATTGCAAGAATTAA+GGG | 0.324072 | 7_1:-64881281 | Msa1030700:CDS |
| TAGATAGCTGCAAGGCTAAA+AGG | 0.333441 | 7_1:+64881718 | None:intergenic |
| TGAAGCACTTGCTAAGAATA+AGG | 0.333907 | 7_1:-64882968 | Msa1030700:CDS |
| GATGTTAAGTTCTGGCAAAT+TGG | 0.351644 | 7_1:+64881694 | None:intergenic |
| TCTAGTGGCTGCATTGTGTC+AGG | 0.354848 | 7_1:+64881058 | None:intergenic |
| ACATGTTCTATTACCTCGTC+AGG | 0.355570 | 7_1:+64883231 | None:intergenic |
| ACCTAAATCGGATAAAATTT+GGG | 0.367218 | 7_1:+64881110 | None:intergenic |
| GGCTGCATTGTGTCAGGGTC+AGG | 0.372008 | 7_1:+64881064 | None:intergenic |
| AAAGTTAAAGATTTCAGATC+AGG | 0.376006 | 7_1:+64883063 | None:intergenic |
| TCTGAAATCTTTAACTTTGA+AGG | 0.377635 | 7_1:-64883058 | Msa1030700:CDS |
| TGTTTAACCTAAGACTCTTA+AGG | 0.378207 | 7_1:+64881914 | None:intergenic |
| TTAGTTCTTGTTAGCTGTGA+AGG | 0.381060 | 7_1:-64882856 | Msa1030700:CDS |
| CAAGGATACATAACCTAAAT+CGG | 0.388537 | 7_1:+64881098 | None:intergenic |
| TGAGAGCAGCATTGGTCATC+TGG | 0.390786 | 7_1:+64881152 | None:intergenic |
| AATGCGAGCACCTCAACTAA+TGG | 0.395557 | 7_1:-64881857 | Msa1030700:CDS |
| AAGTCAATAACCAGTTTGTC+AGG | 0.399205 | 7_1:-64881757 | Msa1030700:CDS |
| ATGTTGTCTATTGCATTTGC+TGG | 0.406493 | 7_1:-64880920 | Msa1030700:CDS |
| TTAGTTTGGTTCCTCATGGT+TGG | 0.407238 | 7_1:-64883014 | Msa1030700:CDS |
| GTTGAAATGTAGGTCTCTTA+GGG | 0.408186 | 7_1:-64882094 | Msa1030700:intron |
| ACAAGTGATGTGCAGCTCTC+TGG | 0.409385 | 7_1:+64882012 | None:intergenic |
| AGGTTGGTTTGGAGGAACTT+AGG | 0.414550 | 7_1:-64882948 | Msa1030700:CDS |
| ATCGTACAGTGGCTGGGAAA+AGG | 0.418126 | 7_1:-64880619 | Msa1030700:CDS |
| TAGAGTAATGAGTGAAGCTT+AGG | 0.419726 | 7_1:+64881184 | None:intergenic |
| TGGGAAACTACAGCGCTTAT+GGG | 0.420323 | 7_1:-64881608 | Msa1030700:intron |
| GCACCTCAACTAATGGATTT+GGG | 0.425041 | 7_1:-64881850 | Msa1030700:CDS |
| CTGAAATCTTTAACTTTGAA+GGG | 0.431379 | 7_1:-64883057 | Msa1030700:CDS |
| TATCATTTCTAACCTGCAAT+TGG | 0.436005 | 7_1:+64882801 | None:intergenic |
| AATGGATCGCATTGGAGACT+TGG | 0.437652 | 7_1:-64881329 | Msa1030700:CDS |
| TATTTGTATCGTACAGTGGC+TGG | 0.438724 | 7_1:-64880626 | Msa1030700:CDS |
| TAGTCCCTCCGGATATTTAG+TGG | 0.444238 | 7_1:-64880470 | Msa1030700:three_prime_UTR |
| CTCTATTAGTCCTGAGAGGT+TGG | 0.445130 | 7_1:-64883097 | Msa1030700:CDS |
| TAAGAATAAGGTTGGTTTGG+AGG | 0.445339 | 7_1:-64882956 | Msa1030700:CDS |
| AACCTAAGACTCTTAAGGTT+AGG | 0.447401 | 7_1:+64881919 | None:intergenic |
| ATGAAACAATGCGATCCCTT+TGG | 0.454128 | 7_1:-64880784 | Msa1030700:CDS |
| TGTCTTTGGTATGCAAAAGT+TGG | 0.456705 | 7_1:-64883170 | Msa1030700:CDS |
| ACTGAGGCGGCTATCGCTCT+CGG | 0.457325 | 7_1:-64880999 | Msa1030700:CDS |
| CACTGTTATGAGAGCAGCAT+TGG | 0.458095 | 7_1:+64881144 | None:intergenic |
| TGCTGCATAGCTCAAGTTCA+AGG | 0.458884 | 7_1:+64881672 | None:intergenic |
| TAGTTCTTGTTAGCTGTGAA+GGG | 0.462515 | 7_1:-64882855 | Msa1030700:CDS |
| AGTTCAAGGATGTTAAGTTC+TGG | 0.465857 | 7_1:+64881686 | None:intergenic |
| AGTTTGGTTCCTCATGGTTG+GGG | 0.466110 | 7_1:-64883012 | Msa1030700:CDS |
| TTAGCAAGTGCTTCAATCCA+TGG | 0.473895 | 7_1:+64882976 | None:intergenic |
| TCGTACAGTGGCTGGGAAAA+GGG | 0.479007 | 7_1:-64880618 | Msa1030700:CDS |
| TACAGAGTCCATACATAGTC+TGG | 0.481632 | 7_1:+64880587 | None:intergenic |
| GGACTTGTAGCGATATCAAT+GGG | 0.483963 | 7_1:-64881211 | Msa1030700:CDS |
| AGTACAAACCACTAAATATC+CGG | 0.489400 | 7_1:+64880462 | None:intergenic |
| TGGTTTCCAAATGGAGCTGA+TGG | 0.489802 | 7_1:+64881253 | None:intergenic |
| AACCTCTCCACCAACCTCTC+AGG | 0.489862 | 7_1:+64883087 | None:intergenic |
| AGGATGCACCAGACTATGTA+TGG | 0.494622 | 7_1:-64880595 | Msa1030700:CDS |
| GCACTTGCTAAGAATAAGGT+TGG | 0.496983 | 7_1:-64882964 | Msa1030700:CDS |
| ATCCTTTGCAGTGCATCGAC+AGG | 0.498123 | 7_1:+64881883 | None:intergenic |
| CGCATTGGAGACTTGGGACT+AGG | 0.501929 | 7_1:-64881322 | Msa1030700:CDS |
| TATTGACTTGCACTTAAGAA+TGG | 0.502436 | 7_1:+64881771 | None:intergenic |
| CTCGGGTCAGTTGACCGACC+AGG | 0.507850 | 7_1:-64880981 | Msa1030700:CDS |
| GAGATTAGAGACTGTCCATT+CGG | 0.509013 | 7_1:-64880839 | Msa1030700:CDS |
| TGGAGGAACTTAGGTTGAAG+AGG | 0.518144 | 7_1:-64882939 | Msa1030700:CDS |
| GGAACTTAGGTTGAAGAGGA+TGG | 0.518519 | 7_1:-64882935 | Msa1030700:CDS |
| TTGGTTCCTCATGGTTGGGG+TGG | 0.518779 | 7_1:-64883009 | Msa1030700:CDS |
| TTTCCACTTCAATTTCAAAA+GGG | 0.521397 | 7_1:-64883399 | Msa1030700:five_prime_UTR |
| CTGAGGCGGCTATCGCTCTC+GGG | 0.522103 | 7_1:-64880998 | Msa1030700:CDS |
| CAGCGTACATTCCGATGTAA+AGG | 0.526342 | 7_1:+64880954 | None:intergenic |
| AGGACTTGTAGCGATATCAA+TGG | 0.526593 | 7_1:-64881212 | Msa1030700:CDS |
| AGGCATCTGAATTGAGATCA+TGG | 0.529060 | 7_1:+64881812 | None:intergenic |
| ACGGCGCTTCTAACAGACAT+AGG | 0.529179 | 7_1:-64880812 | Msa1030700:CDS |
| GTCCTGAGAGGTTGGTGGAG+AGG | 0.530368 | 7_1:-64883089 | Msa1030700:CDS |
| ACAGCCGCTTGGTTTCCAAA+TGG | 0.532377 | 7_1:+64881244 | None:intergenic |
| GCAGATTGTTATGTGGAAGA+TGG | 0.540696 | 7_1:-64880668 | Msa1030700:CDS |
| TGTGAAGGGTTCACCACTGA+TGG | 0.542297 | 7_1:-64882841 | Msa1030700:CDS |
| TATTAGTCCTGAGAGGTTGG+TGG | 0.552035 | 7_1:-64883094 | Msa1030700:CDS |
| TGTAGAAGCTTGCAAGACAT+TGG | 0.559670 | 7_1:-64880741 | Msa1030700:CDS |
| CCTCGCACGACGACATCCAA+AGG | 0.564820 | 7_1:+64880768 | None:intergenic |
| AACATATTAATGAAGTGAAG+TGG | 0.565155 | 7_1:+64880391 | None:intergenic |
| CTAGTGGCTGCATTGTGTCA+GGG | 0.572015 | 7_1:+64881059 | None:intergenic |
| CTCGCACGACGACATCCAAA+GGG | 0.573327 | 7_1:+64880769 | None:intergenic |
| TTGAACTTGAGCTATGCAGC+AGG | 0.574209 | 7_1:-64881670 | Msa1030700:CDS |
| ATGGATCGCATTGGAGACTT+GGG | 0.574539 | 7_1:-64881328 | Msa1030700:CDS |
| GGTTTCCAAATGGAGCTGAT+GGG | 0.578326 | 7_1:+64881254 | None:intergenic |
| ACAATGCAGCCACTAGATGA+AGG | 0.580797 | 7_1:-64881052 | Msa1030700:CDS |
| AAACTAAAATCAGCAAAATG+AGG | 0.583106 | 7_1:+64883030 | None:intergenic |
| TGACTTGCACTTAAGAATGG+TGG | 0.584011 | 7_1:+64881774 | None:intergenic |
| TGCAGTCATGCAAGCGACTG+AGG | 0.586298 | 7_1:-64881015 | Msa1030700:CDS |
| CGGCGCTTCTAACAGACATA+GGG | 0.589191 | 7_1:-64880811 | Msa1030700:CDS |
| ATTTGTATCGTACAGTGGCT+GGG | 0.590955 | 7_1:-64880625 | Msa1030700:CDS |
| CATGAATTATTTCCCTGACG+AGG | 0.597901 | 7_1:-64883244 | Msa1030700:CDS |
| TTCCGATGTAAAGGAAAACC+TGG | 0.600089 | 7_1:+64880963 | None:intergenic |
| CCTTTGGATGTCGTCGTGCG+AGG | 0.601956 | 7_1:-64880768 | Msa1030700:CDS |
| AGTCAATAACCAGTTTGTCA+GGG | 0.602412 | 7_1:-64881756 | Msa1030700:CDS |
| GAAGATGCCGAGGTTGAATG+TGG | 0.604525 | 7_1:-64880714 | Msa1030700:CDS |
| TTGCAGATAATGGATCGCAT+TGG | 0.604842 | 7_1:-64881337 | Msa1030700:intron |
| ATTCCCAAATCCATTAGTTG+AGG | 0.605945 | 7_1:+64881847 | None:intergenic |
| TAAAACTTATTCGCCACTGT+GGG | 0.605959 | 7_1:-64881627 | Msa1030700:CDS |
| GGGAGCACTTGAGAGACTTG+TGG | 0.606863 | 7_1:-64881950 | Msa1030700:CDS |
| GCCCCAAAACCTTCATCTAG+TGG | 0.610150 | 7_1:+64881043 | None:intergenic |
| TGAACAGGCAGATTGTTATG+TGG | 0.618273 | 7_1:-64880675 | Msa1030700:CDS |
| AGACTATGTATGGACTCTGT+AGG | 0.618728 | 7_1:-64880585 | Msa1030700:exon |
| AACAGCAGCAAGGCCATCAG+TGG | 0.621907 | 7_1:+64882828 | None:intergenic |
| GGAATGCTCTATGTATTGAA+CGG | 0.622115 | 7_1:-64880884 | Msa1030700:CDS |
| AAAATCTCCACATTCAACCT+CGG | 0.622596 | 7_1:+64880707 | None:intergenic |
| GGTGGCCTTAAACTTAGCAT+AGG | 0.624275 | 7_1:+64881792 | None:intergenic |
| AGAAGCGCCGTGTCTCCGAA+TGG | 0.629129 | 7_1:+64880824 | None:intergenic |
| AGACTGTCCATTCGGAGACA+CGG | 0.631141 | 7_1:-64880831 | Msa1030700:CDS |
| GATGTAAAGGAAAACCTGGT+CGG | 0.635695 | 7_1:+64880967 | None:intergenic |
| CATGTTCTATTACCTCGTCA+GGG | 0.638356 | 7_1:+64883232 | None:intergenic |
| TGCCTGTCGATGCACTGCAA+AGG | 0.644755 | 7_1:-64881885 | Msa1030700:CDS |
| AGTCATGCAAGCGACTGAGG+CGG | 0.651632 | 7_1:-64881012 | Msa1030700:CDS |
| GATGTATTTGTATCGTACAG+TGG | 0.656726 | 7_1:-64880630 | Msa1030700:CDS |
| AAGAACGAGAAAGTAGCTCA+AGG | 0.658755 | 7_1:+64882896 | None:intergenic |
| ACAAACCACTAAATATCCGG+AGG | 0.660891 | 7_1:+64880465 | None:intergenic |
| GTTACTCTATTAGTCCTGAG+AGG | 0.667341 | 7_1:-64883101 | Msa1030700:CDS |
| ATTTGCTGGTGAGAGTGACA+AGG | 0.667952 | 7_1:-64880906 | Msa1030700:CDS |
| TACAGTGGCTGGGAAAAGGG+AGG | 0.670660 | 7_1:-64880615 | Msa1030700:CDS |
| AATGAAGTTGAAGATCACAA+AGG | 0.677519 | 7_1:-64882054 | Msa1030700:CDS |
| AGCTCCATTTGGAAACCAAG+CGG | 0.677710 | 7_1:-64881248 | Msa1030700:CDS |
| TTGAAGATCACAAAGGACAG+TGG | 0.687258 | 7_1:-64882047 | Msa1030700:CDS |
| CATTGGCTAAGAAGATGCCG+AGG | 0.696683 | 7_1:-64880724 | Msa1030700:CDS |
| AAATTGGATAGATAGCTGCA+AGG | 0.697831 | 7_1:+64881710 | None:intergenic |
| CAAACCACTAAATATCCGGA+GGG | 0.700472 | 7_1:+64880466 | None:intergenic |
| ATAAAACTTATTCGCCACTG+TGG | 0.702261 | 7_1:-64881628 | Msa1030700:CDS |
| AATTGGCAGCAACAGCAGCA+AGG | 0.702589 | 7_1:+64882818 | None:intergenic |
| CAATGCTGCTCTCATAACAG+TGG | 0.702948 | 7_1:-64881143 | Msa1030700:CDS |
| ACAAAACCACCCCAACCATG+AGG | 0.706550 | 7_1:+64883003 | None:intergenic |
| AGCGCTGTAGTTTCCCACAG+TGG | 0.730993 | 7_1:+64881614 | None:intergenic |
| TTTGCTGGTGAGAGTGACAA+GGG | 0.735394 | 7_1:-64880905 | Msa1030700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTTATTCATTTTAAA+TGG | + | chr7_1:64881380-64881399 | None:intergenic | 10.0% |
| !!! | TATGTTTAAGAATTTGTTTT+TGG | - | chr7_1:64881055-64881074 | Msa1030700:CDS | 15.0% |
| !!! | ATTTGATGGTTTTTATTTTT+AGG | - | chr7_1:64881132-64881151 | Msa1030700:CDS | 15.0% |
| !!! | ATCAAATTTCTATTTTTTGA+TGG | - | chr7_1:64881222-64881241 | Msa1030700:CDS | 15.0% |
| !!! | ATTTTTTGATGGATTTTTGT+TGG | - | chr7_1:64881233-64881252 | Msa1030700:CDS | 20.0% |
| !!! | AAAAAAAAAGCACATCTATT+TGG | + | chr7_1:64881415-64881434 | None:intergenic | 20.0% |
| !! | TTGTTTGTATGTGATAAATA+TGG | - | chr7_1:64881561-64881580 | Msa1030700:intron | 20.0% |
| !! | TGTTTGTATGTGATAAATAT+GGG | - | chr7_1:64881562-64881581 | Msa1030700:intron | 20.0% |
| !! | CTTAAAGGTGATATTAATTT+GGG | - | chr7_1:64881816-64881835 | Msa1030700:CDS | 20.0% |
| !! | ATAATTAATGTTGCAGATAA+TGG | - | chr7_1:64882439-64882458 | Msa1030700:intron | 20.0% |
| !! | TAAAGAATTGCAAGAATTAA+GGG | - | chr7_1:64882505-64882524 | Msa1030700:intron | 20.0% |
| ! | TGAAATTGAAGTGGAAAAAA+CGG | + | chr7_1:64880384-64880403 | None:intergenic | 25.0% |
| !! | TTTTCCACTTCAATTTCAAA+AGG | - | chr7_1:64880386-64880405 | Msa1030700:three_prime_UTR | 25.0% |
| ! | TTTCCACTTCAATTTCAAAA+GGG | - | chr7_1:64880387-64880406 | Msa1030700:three_prime_UTR | 25.0% |
| ! | AAAGTTAAAGATTTCAGATC+AGG | + | chr7_1:64880726-64880745 | None:intergenic | 25.0% |
| !! | TCTGAAATCTTTAACTTTGA+AGG | - | chr7_1:64880728-64880747 | Msa1030700:CDS | 25.0% |
| !! | CTGAAATCTTTAACTTTGAA+GGG | - | chr7_1:64880729-64880748 | Msa1030700:CDS | 25.0% |
| ! | AAACTAAAATCAGCAAAATG+AGG | + | chr7_1:64880759-64880778 | None:intergenic | 25.0% |
| !!! | TCATTTTGCTGATTTTAGTT+TGG | - | chr7_1:64880758-64880777 | Msa1030700:CDS | 25.0% |
| !!! | TTGACTTTGTTTTTACCATA+TGG | - | chr7_1:64881083-64881102 | Msa1030700:CDS | 25.0% |
| ! | ACCATCAAATCAAAATTGTA+CGG | + | chr7_1:64881122-64881141 | None:intergenic | 25.0% |
| !!! | TTATTTTTAGGATAGCTGTA+CGG | - | chr7_1:64881144-64881163 | Msa1030700:CDS | 25.0% |
| ! | GTTTGTATGTGATAAATATG+GGG | - | chr7_1:64881563-64881582 | Msa1030700:intron | 25.0% |
| ! | CCAAATTAATATCACCTTTA+AGG | + | chr7_1:64881818-64881837 | None:intergenic | 25.0% |
| ! | CCTTAAAGGTGATATTAATT+TGG | - | chr7_1:64881815-64881834 | Msa1030700:CDS | 25.0% |
| ! | AAACGACAACTAATAATGAA+TGG | + | chr7_1:64882250-64882269 | None:intergenic | 25.0% |
| !! | TTACATGTTTTACTTGTTCT+AGG | - | chr7_1:64882268-64882287 | Msa1030700:intron | 25.0% |
| ! | GTTACAAACTTATGTTTACT+TGG | + | chr7_1:64882307-64882326 | None:intergenic | 25.0% |
| ! | TATCTTCAGTAATTACTCAA+GGG | - | chr7_1:64882402-64882421 | Msa1030700:intron | 25.0% |
| ! | GTAAAGAATTGCAAGAATTA+AGG | - | chr7_1:64882504-64882523 | Msa1030700:intron | 25.0% |
| ! | ACCTAAATCGGATAAAATTT+GGG | + | chr7_1:64882679-64882698 | None:intergenic | 25.0% |
| ! | AACCTAAATCGGATAAAATT+TGG | + | chr7_1:64882680-64882699 | None:intergenic | 25.0% |
| ! | AACATATTAATGAAGTGAAG+TGG | + | chr7_1:64883398-64883417 | None:intergenic | 25.0% |
| !!! | ATACCCTTTTGAAATTGAAG+TGG | + | chr7_1:64880393-64880412 | None:intergenic | 30.0% |
| AAACAAAGATAGAAAACACG+TGG | + | chr7_1:64880445-64880464 | None:intergenic | 30.0% | |
| TCCACAAAAGTTGTGAAATT+TGG | - | chr7_1:64880490-64880509 | Msa1030700:three_prime_UTR | 30.0% | |
| ! | TCCAAATTTCACAACTTTTG+TGG | + | chr7_1:64880494-64880513 | None:intergenic | 30.0% |
| !! | AGAACATGTTTTTGACTATG+TGG | - | chr7_1:64880569-64880588 | Msa1030700:exon | 30.0% |
| ! | ACAAGACAAAGAGTTTTCAT+AGG | - | chr7_1:64880657-64880676 | Msa1030700:CDS | 30.0% |
| TATCATTTCTAACCTGCAAT+TGG | + | chr7_1:64880988-64881007 | None:intergenic | 30.0% | |
| !! | TGTTTTTACCATATGGTGTT+TGG | - | chr7_1:64881090-64881109 | Msa1030700:CDS | 30.0% |
| !!! | TCCGTACAATTTTGATTTGA+TGG | - | chr7_1:64881118-64881137 | Msa1030700:CDS | 30.0% |
| ! | GTGTACTTTTATTCTCTAAC+TGG | + | chr7_1:64881278-64881297 | None:intergenic | 30.0% |
| !!! | TACCCTATGTTTAGTTTTGT+AGG | - | chr7_1:64881339-64881358 | Msa1030700:intron | 30.0% |
| TGCCTACAAAACTAAACATA+GGG | + | chr7_1:64881344-64881363 | None:intergenic | 30.0% | |
| ATGCCTACAAAACTAAACAT+AGG | + | chr7_1:64881345-64881364 | None:intergenic | 30.0% | |
| TTGCTTGTATTACATTTCAG+AGG | - | chr7_1:64881434-64881453 | Msa1030700:intron | 30.0% | |
| TGCTTGTATTACATTTCAGA+GGG | - | chr7_1:64881435-64881454 | Msa1030700:intron | 30.0% | |
| !! | TTATGACTTGCAGTTTTAGT+TGG | - | chr7_1:64881514-64881533 | Msa1030700:intron | 30.0% |
| ATACAAACAAGATAATCCCT+AGG | + | chr7_1:64881551-64881570 | None:intergenic | 30.0% | |
| ! | TTGTGCTTTTGTTGAAATGT+AGG | - | chr7_1:64881682-64881701 | Msa1030700:CDS | 30.0% |
| AATGAAGTTGAAGATCACAA+AGG | - | chr7_1:64881732-64881751 | Msa1030700:CDS | 30.0% | |
| TGTTTAACCTAAGACTCTTA+AGG | + | chr7_1:64881875-64881894 | None:intergenic | 30.0% | |
| !! | TATTGACTTGCACTTAAGAA+TGG | + | chr7_1:64882018-64882037 | None:intergenic | 30.0% |
| CTATCTTCAGTAATTACTCA+AGG | - | chr7_1:64882401-64882420 | Msa1030700:intron | 30.0% | |
| ! | GATAAAATTTGGGCAGTTTT+TGG | + | chr7_1:64882669-64882688 | None:intergenic | 30.0% |
| CAAGGATACATAACCTAAAT+CGG | + | chr7_1:64882691-64882710 | None:intergenic | 30.0% | |
| ! | AAGCTGTTTGTACTTTGTTT+AGG | - | chr7_1:64883273-64883292 | Msa1030700:five_prime_UTR | 30.0% |
| AGTACAAACCACTAAATATC+CGG | + | chr7_1:64883327-64883346 | None:intergenic | 30.0% | |
| CTCTGTGTTTGTTTAGATCT+TGG | - | chr7_1:64880413-64880432 | Msa1030700:three_prime_UTR | 35.0% | |
| TGACAGAAACTCTTTGTCTT+TGG | - | chr7_1:64880602-64880621 | Msa1030700:CDS | 35.0% | |
| TGTCTTTGGTATGCAAAAGT+TGG | - | chr7_1:64880616-64880635 | Msa1030700:CDS | 35.0% | |
| !!! | GATTTTAGTTTGGTTCCTCA+TGG | - | chr7_1:64880768-64880787 | Msa1030700:CDS | 35.0% |
| ! | TGAAGCACTTGCTAAGAATA+AGG | - | chr7_1:64880818-64880837 | Msa1030700:CDS | 35.0% |
| ! | TGCTAAGAATAAGGTTGGTT+TGG | - | chr7_1:64880827-64880846 | Msa1030700:CDS | 35.0% |
| !! | TAAGAATAAGGTTGGTTTGG+AGG | - | chr7_1:64880830-64880849 | Msa1030700:CDS | 35.0% |
| ! | TTAGTTCTTGTTAGCTGTGA+AGG | - | chr7_1:64880930-64880949 | Msa1030700:CDS | 35.0% |
| TAGTTCTTGTTAGCTGTGAA+GGG | - | chr7_1:64880931-64880950 | Msa1030700:CDS | 35.0% | |
| GGATAAATCCAAACACCATA+TGG | + | chr7_1:64881101-64881120 | None:intergenic | 35.0% | |
| GTACACTTAGTTCAGCAAAA+TGG | - | chr7_1:64881292-64881311 | Msa1030700:CDS | 35.0% | |
| ACTTAGTTCAGCAAAATGGT+TGG | - | chr7_1:64881296-64881315 | Msa1030700:CDS | 35.0% | |
| AGTTGGAAAAATGTGTTCCT+AGG | - | chr7_1:64881531-64881550 | Msa1030700:intron | 35.0% | |
| GTTGGAAAAATGTGTTCCTA+GGG | - | chr7_1:64881532-64881551 | Msa1030700:intron | 35.0% | |
| TATGTGATAAATATGGGGTC+AGG | - | chr7_1:64881568-64881587 | Msa1030700:intron | 35.0% | |
| ATGTGATAAATATGGGGTCA+GGG | - | chr7_1:64881569-64881588 | Msa1030700:intron | 35.0% | |
| TGTTGAAATGTAGGTCTCTT+AGG | - | chr7_1:64881691-64881710 | Msa1030700:CDS | 35.0% | |
| GTTGAAATGTAGGTCTCTTA+GGG | - | chr7_1:64881692-64881711 | Msa1030700:CDS | 35.0% | |
| CTTAATTTCGCTTGCCTTAA+AGG | - | chr7_1:64881801-64881820 | Msa1030700:CDS | 35.0% | |
| AACCTAAGACTCTTAAGGTT+AGG | + | chr7_1:64881870-64881889 | None:intergenic | 35.0% | |
| ATTCCCAAATCCATTAGTTG+AGG | + | chr7_1:64881942-64881961 | None:intergenic | 35.0% | |
| !! | CAACTAATGGATTTGGGAAT+TGG | - | chr7_1:64881942-64881961 | Msa1030700:CDS | 35.0% |
| AGATGCCTATGCTAAGTTTA+AGG | - | chr7_1:64881989-64882008 | Msa1030700:CDS | 35.0% | |
| AAGTCAATAACCAGTTTGTC+AGG | - | chr7_1:64882029-64882048 | Msa1030700:CDS | 35.0% | |
| AGTCAATAACCAGTTTGTCA+GGG | - | chr7_1:64882030-64882049 | Msa1030700:CDS | 35.0% | |
| AAATTGGATAGATAGCTGCA+AGG | + | chr7_1:64882079-64882098 | None:intergenic | 35.0% | |
| ! | GATGTTAAGTTCTGGCAAAT+TGG | + | chr7_1:64882095-64882114 | None:intergenic | 35.0% |
| AGTTCAAGGATGTTAAGTTC+TGG | + | chr7_1:64882103-64882122 | None:intergenic | 35.0% | |
| ATAAAACTTATTCGCCACTG+TGG | - | chr7_1:64882158-64882177 | Msa1030700:intron | 35.0% | |
| TAAAACTTATTCGCCACTGT+GGG | - | chr7_1:64882159-64882178 | Msa1030700:intron | 35.0% | |
| TGGATGCTGTAACAAGTAAA+TGG | + | chr7_1:64882230-64882249 | None:intergenic | 35.0% | |
| ACTGAAGATAGAGCAATAAG+TGG | + | chr7_1:64882392-64882411 | None:intergenic | 35.0% | |
| ! | TATCGCTACAAGTCCTTTTT+CGG | + | chr7_1:64882570-64882589 | None:intergenic | 35.0% |
| TAGAGTAATGAGTGAAGCTT+AGG | + | chr7_1:64882605-64882624 | None:intergenic | 35.0% | |
| ! | GCCCAAATTTTATCCGATTT+AGG | - | chr7_1:64882675-64882694 | Msa1030700:intron | 35.0% |
| ATGTTGTCTATTGCATTTGC+TGG | - | chr7_1:64882866-64882885 | Msa1030700:CDS | 35.0% | |
| GGAATGCTCTATGTATTGAA+CGG | - | chr7_1:64882902-64882921 | Msa1030700:CDS | 35.0% | |
| AAAATCTCCACATTCAACCT+CGG | + | chr7_1:64883082-64883101 | None:intergenic | 35.0% | |
| ! | GATTTTCAGTGAAAGTGAAC+AGG | - | chr7_1:64883096-64883115 | Msa1030700:CDS | 35.0% |
| GATGTATTTGTATCGTACAG+TGG | - | chr7_1:64883156-64883175 | Msa1030700:CDS | 35.0% | |
| !! | TAATGCAATTTTAGTCCCTC+CGG | - | chr7_1:64883305-64883324 | Msa1030700:intron | 35.0% |
| CATGAATTATTTCCCTGACG+AGG | - | chr7_1:64880542-64880561 | Msa1030700:three_prime_UTR | 40.0% | |
| CATGTTCTATTACCTCGTCA+GGG | + | chr7_1:64880557-64880576 | None:intergenic | 40.0% | |
| ACATGTTCTATTACCTCGTC+AGG | + | chr7_1:64880558-64880577 | None:intergenic | 40.0% | |
| GTTACTCTATTAGTCCTGAG+AGG | - | chr7_1:64880685-64880704 | Msa1030700:CDS | 40.0% | |
| ! | TTAGTTTGGTTCCTCATGGT+TGG | - | chr7_1:64880772-64880791 | Msa1030700:CDS | 40.0% |
| ! | TAGTTTGGTTCCTCATGGTT+GGG | - | chr7_1:64880773-64880792 | Msa1030700:CDS | 40.0% |
| TTAGCAAGTGCTTCAATCCA+TGG | + | chr7_1:64880813-64880832 | None:intergenic | 40.0% | |
| ! | GCACTTGCTAAGAATAAGGT+TGG | - | chr7_1:64880822-64880841 | Msa1030700:CDS | 40.0% |
| AAGAACGAGAAAGTAGCTCA+AGG | + | chr7_1:64880893-64880912 | None:intergenic | 40.0% | |
| GCAAAATGGTTGGATGACTT+TGG | - | chr7_1:64881306-64881325 | Msa1030700:CDS | 40.0% | |
| TCTTGACATCCCATATCGTA+TGG | - | chr7_1:64881658-64881677 | Msa1030700:CDS | 40.0% | |
| AAGCACAAGCCATACGATAT+GGG | + | chr7_1:64881670-64881689 | None:intergenic | 40.0% | |
| AAAGCACAAGCCATACGATA+TGG | + | chr7_1:64881671-64881690 | None:intergenic | 40.0% | |
| CTTCAACTTCATTCTCTTGC+AGG | + | chr7_1:64881725-64881744 | None:intergenic | 40.0% | |
| TTGAAGATCACAAAGGACAG+TGG | - | chr7_1:64881739-64881758 | Msa1030700:CDS | 40.0% | |
| CTCCTAACCTTAAGAGTCTT+AGG | - | chr7_1:64881865-64881884 | Msa1030700:CDS | 40.0% | |
| !! | AGCACCTCAACTAATGGATT+TGG | - | chr7_1:64881935-64881954 | Msa1030700:CDS | 40.0% |
| !! | GCACCTCAACTAATGGATTT+GGG | - | chr7_1:64881936-64881955 | Msa1030700:CDS | 40.0% |
| AGGCATCTGAATTGAGATCA+TGG | + | chr7_1:64881977-64881996 | None:intergenic | 40.0% | |
| ! | TGACTTGCACTTAAGAATGG+TGG | + | chr7_1:64882015-64882034 | None:intergenic | 40.0% |
| ! | AACCAGTTTGTCAGGGTTTT+TGG | - | chr7_1:64882037-64882056 | Msa1030700:CDS | 40.0% |
| TTCCAAAAACCCTGACAAAC+TGG | + | chr7_1:64882042-64882061 | None:intergenic | 40.0% | |
| !! | TTTGTCAGGGTTTTTGGAAG+TGG | - | chr7_1:64882043-64882062 | Msa1030700:CDS | 40.0% |
| TAGATAGCTGCAAGGCTAAA+AGG | + | chr7_1:64882071-64882090 | None:intergenic | 40.0% | |
| !! | TTGCAGATAATGGATCGCAT+TGG | - | chr7_1:64882449-64882468 | Msa1030700:intron | 40.0% |
| AGGACTTGTAGCGATATCAA+TGG | - | chr7_1:64882574-64882593 | Msa1030700:intron | 40.0% | |
| GGACTTGTAGCGATATCAAT+GGG | - | chr7_1:64882575-64882594 | Msa1030700:intron | 40.0% | |
| ! | AGCCACTAGATGAAGGTTTT+GGG | - | chr7_1:64882741-64882760 | Msa1030700:intron | 40.0% |
| GATGTAAAGGAAAACCTGGT+CGG | + | chr7_1:64882822-64882841 | None:intergenic | 40.0% | |
| ! | GACCAGGTTTTCCTTTACAT+CGG | - | chr7_1:64882821-64882840 | Msa1030700:CDS | 40.0% |
| TTCCGATGTAAAGGAAAACC+TGG | + | chr7_1:64882826-64882845 | None:intergenic | 40.0% | |
| GAGATTAGAGACTGTCCATT+CGG | - | chr7_1:64882947-64882966 | Msa1030700:CDS | 40.0% | |
| ATGAAACAATGCGATCCCTT+TGG | - | chr7_1:64883002-64883021 | Msa1030700:CDS | 40.0% | |
| TGTAGAAGCTTGCAAGACAT+TGG | - | chr7_1:64883045-64883064 | Msa1030700:CDS | 40.0% | |
| TGAACAGGCAGATTGTTATG+TGG | - | chr7_1:64883111-64883130 | Msa1030700:CDS | 40.0% | |
| GCAGATTGTTATGTGGAAGA+TGG | - | chr7_1:64883118-64883137 | Msa1030700:CDS | 40.0% | |
| TATTTGTATCGTACAGTGGC+TGG | - | chr7_1:64883160-64883179 | Msa1030700:CDS | 40.0% | |
| ATTTGTATCGTACAGTGGCT+GGG | - | chr7_1:64883161-64883180 | Msa1030700:CDS | 40.0% | |
| TACAGAGTCCATACATAGTC+TGG | + | chr7_1:64883202-64883221 | None:intergenic | 40.0% | |
| AGACTATGTATGGACTCTGT+AGG | - | chr7_1:64883201-64883220 | Msa1030700:CDS | 40.0% | |
| CAAACCACTAAATATCCGGA+GGG | + | chr7_1:64883323-64883342 | None:intergenic | 40.0% | |
| ACAAACCACTAAATATCCGG+AGG | + | chr7_1:64883324-64883343 | None:intergenic | 40.0% | |
| CTCTATTAGTCCTGAGAGGT+TGG | - | chr7_1:64880689-64880708 | Msa1030700:CDS | 45.0% | |
| TATTAGTCCTGAGAGGTTGG+TGG | - | chr7_1:64880692-64880711 | Msa1030700:CDS | 45.0% | |
| ! | AGTTTGGTTCCTCATGGTTG+GGG | - | chr7_1:64880774-64880793 | Msa1030700:CDS | 45.0% |
| !!! | GGGGTGGTTTTGTTTATCCA+TGG | - | chr7_1:64880793-64880812 | Msa1030700:CDS | 45.0% |
| !! | AGGTTGGTTTGGAGGAACTT+AGG | - | chr7_1:64880838-64880857 | Msa1030700:CDS | 45.0% |
| !! | TGGAGGAACTTAGGTTGAAG+AGG | - | chr7_1:64880847-64880866 | Msa1030700:CDS | 45.0% |
| !! | GGAACTTAGGTTGAAGAGGA+TGG | - | chr7_1:64880851-64880870 | Msa1030700:CDS | 45.0% |
| AATGCGAGCACCTCAACTAA+TGG | - | chr7_1:64881929-64881948 | Msa1030700:CDS | 45.0% | |
| ! | GGTGGCCTTAAACTTAGCAT+AGG | + | chr7_1:64881997-64882016 | None:intergenic | 45.0% |
| TGCTGCATAGCTCAAGTTCA+AGG | + | chr7_1:64882117-64882136 | None:intergenic | 45.0% | |
| TTGAACTTGAGCTATGCAGC+AGG | - | chr7_1:64882116-64882135 | Msa1030700:intron | 45.0% | |
| ! | AGCTATGCAGCAGGCATTTT+GGG | - | chr7_1:64882125-64882144 | Msa1030700:intron | 45.0% |
| TGGGAAACTACAGCGCTTAT+GGG | - | chr7_1:64882178-64882197 | Msa1030700:intron | 45.0% | |
| AATGGATCGCATTGGAGACT+TGG | - | chr7_1:64882457-64882476 | Msa1030700:intron | 45.0% | |
| ATGGATCGCATTGGAGACTT+GGG | - | chr7_1:64882458-64882477 | Msa1030700:intron | 45.0% | |
| ! | GTTTTCCCATCAGCTCCATT+TGG | - | chr7_1:64882527-64882546 | Msa1030700:intron | 45.0% |
| GGTTTCCAAATGGAGCTGAT+GGG | + | chr7_1:64882535-64882554 | None:intergenic | 45.0% | |
| TGGTTTCCAAATGGAGCTGA+TGG | + | chr7_1:64882536-64882555 | None:intergenic | 45.0% | |
| AGCTCCATTTGGAAACCAAG+CGG | - | chr7_1:64882538-64882557 | Msa1030700:intron | 45.0% | |
| CACTGTTATGAGAGCAGCAT+TGG | + | chr7_1:64882645-64882664 | None:intergenic | 45.0% | |
| CAATGCTGCTCTCATAACAG+TGG | - | chr7_1:64882643-64882662 | Msa1030700:intron | 45.0% | |
| !!! | GGTCAGGTTTTGTTGCATCA+AGG | + | chr7_1:64882709-64882728 | None:intergenic | 45.0% |
| ACAATGCAGCCACTAGATGA+AGG | - | chr7_1:64882734-64882753 | Msa1030700:intron | 45.0% | |
| ! | CAGCCACTAGATGAAGGTTT+TGG | - | chr7_1:64882740-64882759 | Msa1030700:intron | 45.0% |
| ! | GCCACTAGATGAAGGTTTTG+GGG | - | chr7_1:64882742-64882761 | Msa1030700:intron | 45.0% |
| CAGCGTACATTCCGATGTAA+AGG | + | chr7_1:64882835-64882854 | None:intergenic | 45.0% | |
| ! | ATTTGCTGGTGAGAGTGACA+AGG | - | chr7_1:64882880-64882899 | Msa1030700:CDS | 45.0% |
| TTTGCTGGTGAGAGTGACAA+GGG | - | chr7_1:64882881-64882900 | Msa1030700:CDS | 45.0% | |
| AGGATGCACCAGACTATGTA+TGG | - | chr7_1:64883191-64883210 | Msa1030700:CDS | 45.0% | |
| ! | GGACTCTGTAGGTGCATTTT+AGG | - | chr7_1:64883212-64883231 | Msa1030700:CDS | 45.0% |
| TAGTCCCTCCGGATATTTAG+TGG | - | chr7_1:64883316-64883335 | Msa1030700:intron | 45.0% | |
| ACAAAACCACCCCAACCATG+AGG | + | chr7_1:64880786-64880805 | None:intergenic | 50.0% | |
| TGTGAAGGGTTCACCACTGA+TGG | - | chr7_1:64880945-64880964 | Msa1030700:CDS | 50.0% | |
| AATTGGCAGCAACAGCAGCA+AGG | + | chr7_1:64880971-64880990 | None:intergenic | 50.0% | |
| ACAAGTGATGTGCAGCTCTC+TGG | + | chr7_1:64881777-64881796 | None:intergenic | 50.0% | |
| ! | ATCCTTTGCAGTGCATCGAC+AGG | + | chr7_1:64881906-64881925 | None:intergenic | 50.0% |
| ! | GAGCTATGCAGCAGGCATTT+TGG | - | chr7_1:64882124-64882143 | Msa1030700:intron | 50.0% |
| GTGGGAAACTACAGCGCTTA+TGG | - | chr7_1:64882177-64882196 | Msa1030700:intron | 50.0% | |
| ACAGCCGCTTGGTTTCCAAA+TGG | + | chr7_1:64882545-64882564 | None:intergenic | 50.0% | |
| !!! | CTTTTTCGGTAACAGCCGCT+TGG | + | chr7_1:64882556-64882575 | None:intergenic | 50.0% |
| CAAGCGGCTGTTACCGAAAA+AGG | - | chr7_1:64882554-64882573 | Msa1030700:intron | 50.0% | |
| !! | TGAGAGCAGCATTGGTCATC+TGG | + | chr7_1:64882637-64882656 | None:intergenic | 50.0% |
| CTAGTGGCTGCATTGTGTCA+GGG | + | chr7_1:64882730-64882749 | None:intergenic | 50.0% | |
| TCTAGTGGCTGCATTGTGTC+AGG | + | chr7_1:64882731-64882750 | None:intergenic | 50.0% | |
| GCCCCAAAACCTTCATCTAG+TGG | + | chr7_1:64882746-64882765 | None:intergenic | 50.0% | |
| AGACTGTCCATTCGGAGACA+CGG | - | chr7_1:64882955-64882974 | Msa1030700:CDS | 50.0% | |
| ACGGCGCTTCTAACAGACAT+AGG | - | chr7_1:64882974-64882993 | Msa1030700:CDS | 50.0% | |
| CGGCGCTTCTAACAGACATA+GGG | - | chr7_1:64882975-64882994 | Msa1030700:CDS | 50.0% | |
| ! | CATTGGCTAAGAAGATGCCG+AGG | - | chr7_1:64883062-64883081 | Msa1030700:CDS | 50.0% |
| GAAGATGCCGAGGTTGAATG+TGG | - | chr7_1:64883072-64883091 | Msa1030700:CDS | 50.0% | |
| ATCGTACAGTGGCTGGGAAA+AGG | - | chr7_1:64883167-64883186 | Msa1030700:CDS | 50.0% | |
| TCGTACAGTGGCTGGGAAAA+GGG | - | chr7_1:64883168-64883187 | Msa1030700:CDS | 50.0% | |
| AACCTCTCCACCAACCTCTC+AGG | + | chr7_1:64880702-64880721 | None:intergenic | 55.0% | |
| TTGGTTCCTCATGGTTGGGG+TGG | - | chr7_1:64880777-64880796 | Msa1030700:CDS | 55.0% | |
| AACAGCAGCAAGGCCATCAG+TGG | + | chr7_1:64880961-64880980 | None:intergenic | 55.0% | |
| CTGCTGTTGCTGCCAATTGC+AGG | - | chr7_1:64880973-64880992 | Msa1030700:CDS | 55.0% | |
| !! | GGGAGCACTTGAGAGACTTG+TGG | - | chr7_1:64881836-64881855 | Msa1030700:CDS | 55.0% |
| TGCCTGTCGATGCACTGCAA+AGG | - | chr7_1:64881901-64881920 | Msa1030700:CDS | 55.0% | |
| AGCGCTGTAGTTTCCCACAG+TGG | + | chr7_1:64882175-64882194 | None:intergenic | 55.0% | |
| CGCATTGGAGACTTGGGACT+AGG | - | chr7_1:64882464-64882483 | Msa1030700:intron | 55.0% | |
| TGCAGTCATGCAAGCGACTG+AGG | - | chr7_1:64882771-64882790 | Msa1030700:intron | 55.0% | |
| AGTCATGCAAGCGACTGAGG+CGG | - | chr7_1:64882774-64882793 | Msa1030700:intron | 55.0% | |
| CTCGCACGACGACATCCAAA+GGG | + | chr7_1:64883020-64883039 | None:intergenic | 55.0% | |
| TACAGTGGCTGGGAAAAGGG+AGG | - | chr7_1:64883171-64883190 | Msa1030700:CDS | 55.0% | |
| !! | GTCCTGAGAGGTTGGTGGAG+AGG | - | chr7_1:64880697-64880716 | Msa1030700:CDS | 60.0% |
| GGCTGCATTGTGTCAGGGTC+AGG | + | chr7_1:64882725-64882744 | None:intergenic | 60.0% | |
| ACTGAGGCGGCTATCGCTCT+CGG | - | chr7_1:64882787-64882806 | Msa1030700:intron | 60.0% | |
| !! | AGAAGCGCCGTGTCTCCGAA+TGG | + | chr7_1:64882965-64882984 | None:intergenic | 60.0% |
| CCTCGCACGACGACATCCAA+AGG | + | chr7_1:64883021-64883040 | None:intergenic | 60.0% | |
| CCTTTGGATGTCGTCGTGCG+AGG | - | chr7_1:64883018-64883037 | Msa1030700:CDS | 60.0% | |
| CTGAGGCGGCTATCGCTCTC+GGG | - | chr7_1:64882788-64882807 | Msa1030700:intron | 65.0% | |
| CTCGGGTCAGTTGACCGACC+AGG | - | chr7_1:64882805-64882824 | Msa1030700:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 64880342 | 64883466 | 64880342 | ID=Msa1030700;Name=Msa1030700 |
| chr7_1 | mRNA | 64880342 | 64883466 | 64880342 | ID=Msa1030700-mRNA-1;Parent=Msa1030700;Name=Msa1030700-mRNA-1;_AED=0.15;_eAED=0.15;_QI=118|1|0.75|1|0.66|0.5|4|244|571 |
| chr7_1 | exon | 64880342 | 64881353 | 64880342 | ID=Msa1030700-mRNA-1:exon:14302;Parent=Msa1030700-mRNA-1 |
| chr7_1 | exon | 64881609 | 64882104 | 64881609 | ID=Msa1030700-mRNA-1:exon:14301;Parent=Msa1030700-mRNA-1 |
| chr7_1 | exon | 64882814 | 64883308 | 64882814 | ID=Msa1030700-mRNA-1:exon:14300;Parent=Msa1030700-mRNA-1 |
| chr7_1 | exon | 64883392 | 64883466 | 64883392 | ID=Msa1030700-mRNA-1:exon:14299;Parent=Msa1030700-mRNA-1 |
| chr7_1 | five_prime_UTR | 64883392 | 64883466 | 64883392 | ID=Msa1030700-mRNA-1:five_prime_utr;Parent=Msa1030700-mRNA-1 |
| chr7_1 | five_prime_UTR | 64883266 | 64883308 | 64883266 | ID=Msa1030700-mRNA-1:five_prime_utr;Parent=Msa1030700-mRNA-1 |
| chr7_1 | CDS | 64882814 | 64883265 | 64882814 | ID=Msa1030700-mRNA-1:cds;Parent=Msa1030700-mRNA-1 |
| chr7_1 | CDS | 64881609 | 64882104 | 64881609 | ID=Msa1030700-mRNA-1:cds;Parent=Msa1030700-mRNA-1 |
| chr7_1 | CDS | 64880586 | 64881353 | 64880586 | ID=Msa1030700-mRNA-1:cds;Parent=Msa1030700-mRNA-1 |
| chr7_1 | three_prime_UTR | 64880342 | 64880585 | 64880342 | ID=Msa1030700-mRNA-1:three_prime_utr;Parent=Msa1030700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
