Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033750 | XP_003625047.1 | 97.473 | 277 | 7 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033750 | sp|Q5HZL9|HDHD3_XENLA | 33.005 | 203 | 117 | 6 | 70 | 258 | 9 | 206 | 2.27e-19 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033750 | G7KRP6 | 97.473 | 277 | 7 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1033750 | Msa1113700 | 0.832024 | 1.196947e-55 | -8.615850e-47 |
| Msa1033750 | Msa1114210 | 0.868320 | 7.127412e-66 | -8.615850e-47 |
| Msa1033750 | Msa1160180 | 0.970016 | 5.571503e-131 | -8.615850e-47 |
| Msa1033750 | Msa1374930 | 0.820934 | 5.275290e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033750 | MtrunA17_Chr7g0256641 | 97.473 | 277 | 7 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
| Msa1033750 | MtrunA17_Chr5g0416861 | 48.341 | 211 | 105 | 3 | 64 | 273 | 66 | 273 | 1.08e-67 | 211 |
| Msa1033750 | MtrunA17_Chr7g0231601 | 47.826 | 207 | 104 | 3 | 64 | 269 | 63 | 266 | 6.99e-66 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033750 | AT2G41250.1 | 81.304 | 230 | 43 | 0 | 48 | 277 | 61 | 290 | 2.75e-137 | 389 |
| Msa1033750 | AT1G14310.1 | 49.528 | 212 | 105 | 2 | 64 | 275 | 42 | 251 | 1.96e-67 | 210 |
Find 78 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATGATGGTAGACCTTTC+TGG | 0.249688 | 7_1:+68985523 | Msa1033750:CDS |
| ATGATCGTCGAAATGATATA+TGG | 0.289147 | 7_1:+68987229 | Msa1033750:CDS |
| TTCAGAAATATAGTTGGATT+TGG | 0.302915 | 7_1:-68987156 | None:intergenic |
| TTGAACACTTCTTCTGTGTT+AGG | 0.306154 | 7_1:-68985749 | None:intergenic |
| TAGAAACTCAGGTGTGAAAT+TGG | 0.317258 | 7_1:+68985778 | Msa1033750:CDS |
| CAGGCTGTGATGCATGGCTT+TGG | 0.332233 | 7_1:+68987265 | Msa1033750:CDS |
| TATTCATTAAATGATGTATC+TGG | 0.356049 | 7_1:-68984144 | None:intergenic |
| TTTGGTGAGTGACTTGGATT+TGG | 0.369028 | 7_1:-68984373 | None:intergenic |
| AGAACGATTGGGGAGAAATA+TGG | 0.377341 | 7_1:+68984678 | Msa1033750:CDS |
| AGGCTGTGATGCATGGCTTT+GGG | 0.378994 | 7_1:+68987266 | Msa1033750:CDS |
| TCTGAAAGCGTGTGAACTAT+TGG | 0.383129 | 7_1:+68987173 | Msa1033750:CDS |
| GATTATAGAAGATCTCTTTA+CGG | 0.384557 | 7_1:+68984492 | Msa1033750:CDS |
| CACAGCTGCGGCGGAGGAAG+TGG | 0.389807 | 7_1:-68984421 | None:intergenic |
| AAGGGTGTATGTAATAAAAT+AGG | 0.391192 | 7_1:-68984048 | None:intergenic |
| CACGCTTTCAGAAATATAGT+TGG | 0.393418 | 7_1:-68987162 | None:intergenic |
| TGCATCACAGCCTGCATCTC+TGG | 0.399671 | 7_1:-68987256 | None:intergenic |
| TCGGTTAAGACCTCTCTTGC+GGG | 0.408806 | 7_1:+68985823 | Msa1033750:CDS |
| AGCCACCACAGCTGCGGCGG+AGG | 0.419941 | 7_1:-68984427 | None:intergenic |
| TTTAGATATATAGAACGATT+GGG | 0.421275 | 7_1:+68984667 | Msa1033750:intron |
| TGTTCTTCCTTCTCAACCCA+TGG | 0.422624 | 7_1:+68984560 | Msa1033750:CDS |
| AGCACAGAGGATTGGTGTCC+AGG | 0.433372 | 7_1:+68987961 | Msa1033750:CDS |
| CTGAGGATGCTGTTCATGTT+GGG | 0.434567 | 7_1:+68987205 | Msa1033750:CDS |
| AAGAGCTTATAGTCAACCTT+GGG | 0.436522 | 7_1:+68984740 | Msa1033750:CDS |
| TCCTTCTCAACCCATGGCTC+AGG | 0.437339 | 7_1:+68984566 | Msa1033750:CDS |
| GCTCTTCTTGTTGATGCTGT+TGG | 0.438636 | 7_1:+68984531 | Msa1033750:CDS |
| CTCACTATGTATTGCCAGAA+AGG | 0.449095 | 7_1:-68985537 | None:intergenic |
| GAGTAATTCTACTGGCTGTT+CGG | 0.455824 | 7_1:+68985557 | Msa1033750:CDS |
| CGACGGTGAACGGCACCATT+TGG | 0.457580 | 7_1:-68984391 | None:intergenic |
| TGATCGTCGAAATGATATAT+GGG | 0.458223 | 7_1:+68987230 | Msa1033750:CDS |
| CACTTCCTCCGCCGCAGCTG+TGG | 0.460319 | 7_1:+68984422 | Msa1033750:CDS |
| GCACCATTTGGTGAGTGACT+TGG | 0.468245 | 7_1:-68984379 | None:intergenic |
| TATTAATAAATAAAATAAAC+CGG | 0.478283 | 7_1:+68988202 | Msa1033750:three_prime_UTR |
| CTTTGCAGATATGTTAATGA+TGG | 0.480696 | 7_1:+68985510 | Msa1033750:intron |
| TTCCTCCGCCGCAGCTGTGG+TGG | 0.487008 | 7_1:+68984425 | Msa1033750:CDS |
| GGGCATTAAACTGTGATGAT+TGG | 0.499814 | 7_1:+68985843 | Msa1033750:CDS |
| TCTTCACATTGGAAATGAGT+TGG | 0.503588 | 7_1:-68984288 | None:intergenic |
| TTTACTCAAAATTAATCCAC+CGG | 0.509883 | 7_1:-68988221 | None:intergenic |
| TTCAAAGCTCTTAGAAACTC+AGG | 0.510990 | 7_1:+68985767 | Msa1033750:CDS |
| AATCCAAGTCACTCACCAAA+TGG | 0.515543 | 7_1:+68984376 | Msa1033750:CDS |
| TGAATGAATTACCTGAGCCA+TGG | 0.520121 | 7_1:-68984577 | None:intergenic |
| ATATGGGGTGCCAGAGATGC+AGG | 0.522973 | 7_1:+68987246 | Msa1033750:CDS |
| ACCTGAGCCATGGGTTGAGA+AGG | 0.526827 | 7_1:-68984567 | None:intergenic |
| GGCTGTGATGCATGGCTTTG+GGG | 0.533409 | 7_1:+68987267 | Msa1033750:CDS |
| TACATAGTGAGTAATTCTAC+TGG | 0.536989 | 7_1:+68985549 | Msa1033750:CDS |
| TTAGATATATAGAACGATTG+GGG | 0.538472 | 7_1:+68984668 | Msa1033750:intron |
| AGCTGCGGCGGAGGAAGTGG+AGG | 0.539047 | 7_1:-68984418 | None:intergenic |
| CCTGAGGATGCTGTTCATGT+TGG | 0.541192 | 7_1:+68987204 | Msa1033750:CDS |
| CTTGGGGTAAATCTCGTCTC+AGG | 0.541735 | 7_1:+68984757 | Msa1033750:CDS |
| AACTTATGAAACAGAAATGA+AGG | 0.543782 | 7_1:+68988109 | Msa1033750:three_prime_UTR |
| TTCTTCAGCCACCACAGCTG+CGG | 0.544992 | 7_1:-68984433 | None:intergenic |
| CAGTTTAATGCCCGCAAGAG+AGG | 0.545810 | 7_1:-68985833 | None:intergenic |
| TTCAGCCACCACAGCTGCGG+CGG | 0.545958 | 7_1:-68984430 | None:intergenic |
| TTTATGCTACAAGTTCAAGA+AGG | 0.550134 | 7_1:+68987995 | Msa1033750:three_prime_UTR |
| GAAGAGCTTATAGTCAACCT+TGG | 0.555689 | 7_1:+68984739 | Msa1033750:CDS |
| GAATGAATTACCTGAGCCAT+GGG | 0.558413 | 7_1:-68984576 | None:intergenic |
| TGTTCTTAGCTTCTTCACAT+TGG | 0.559222 | 7_1:-68984299 | None:intergenic |
| TGAAACAGAAATGAAGGTGT+AGG | 0.561462 | 7_1:+68988115 | Msa1033750:three_prime_UTR |
| CCAACATGAACAGCATCCTC+AGG | 0.569555 | 7_1:-68987204 | None:intergenic |
| ACGCAGGTAGCACAGAGGAT+TGG | 0.572051 | 7_1:+68987953 | Msa1033750:intron |
| TGGAGGAGTACGACGGTGAA+CGG | 0.578395 | 7_1:-68984401 | None:intergenic |
| CTGAGACGAGATTTACCCCA+AGG | 0.582915 | 7_1:-68984756 | None:intergenic |
| CTCGGTTAAGACCTCTCTTG+CGG | 0.592040 | 7_1:+68985822 | Msa1033750:CDS |
| CATACAACACTCGCATCGCA+CGG | 0.592821 | 7_1:-68984235 | None:intergenic |
| GAGATGCAGGCTGTGATGCA+TGG | 0.598443 | 7_1:+68987259 | Msa1033750:CDS |
| ACAGAAATGAAGGTGTAGGT+AGG | 0.622289 | 7_1:+68988119 | Msa1033750:three_prime_UTR |
| CTTCTGTGTTAGGATCACAT+AGG | 0.622443 | 7_1:-68985739 | None:intergenic |
| GAACAAATAACGAACGAACA+TGG | 0.637482 | 7_1:+68984317 | Msa1033750:exon |
| TGAGGATGCTGTTCATGTTG+GGG | 0.639896 | 7_1:+68987206 | Msa1033750:CDS |
| TAATAAATAAAATAAACCGG+TGG | 0.643912 | 7_1:+68988205 | Msa1033750:three_prime_UTR |
| ATATGGTGTGAATTATTCAG+AGG | 0.644916 | 7_1:+68984695 | Msa1033750:CDS |
| TGCTGTAGCAGTATCAGCTG+AGG | 0.669977 | 7_1:+68985871 | Msa1033750:CDS |
| GATCGTCGAAATGATATATG+GGG | 0.681395 | 7_1:+68987231 | Msa1033750:CDS |
| GTATGAAACATGTGAACGAG+TGG | 0.703859 | 7_1:+68984253 | Msa1033750:five_prime_UTR |
| GAGGAAGTGGAGGAGTACGA+CGG | 0.706146 | 7_1:-68984408 | None:intergenic |
| TAACTACTATACGACTGACA+AGG | 0.713612 | 7_1:+68985605 | Msa1033750:CDS |
| AGAGCTTATAGTCAACCTTG+GGG | 0.721676 | 7_1:+68984741 | Msa1033750:CDS |
| TGCTGACGCAGGTAGCACAG+AGG | 0.734423 | 7_1:+68987948 | Msa1033750:intron |
| ACTATTGGATGTAAAACCTG+AGG | 0.738416 | 7_1:+68987188 | Msa1033750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAATGATAATTGAA+GGG | - | chr7_1:68984069-68984088 | None:intergenic | 10.0% |
| !!! | TTTTTTATAATGATAATTGA+AGG | - | chr7_1:68984070-68984089 | None:intergenic | 10.0% |
| !!! | TTATTATACATTTTAGAAAA+AGG | - | chr7_1:68985649-68985668 | None:intergenic | 10.0% |
| !! | TAATATAATATAACATTTGA+GGG | - | chr7_1:68986026-68986045 | None:intergenic | 10.0% |
| !! | TTAATATAATATAACATTTG+AGG | - | chr7_1:68986027-68986046 | None:intergenic | 10.0% |
| !! | TTTATATTAGAGATTATCAA+TGG | + | chr7_1:68984900-68984919 | Msa1033750:intron | 15.0% |
| !!! | ATTAAACAAGTTTTTCATTA+TGG | + | chr7_1:68985418-68985437 | Msa1033750:intron | 15.0% |
| !! | AATATAATATAACATTTGAG+GGG | - | chr7_1:68986025-68986044 | None:intergenic | 15.0% |
| !! | TTAATGTATATGTGAATTAT+TGG | + | chr7_1:68987100-68987119 | Msa1033750:intron | 15.0% |
| !!! | ACATTTTATTAATAGAGTTT+AGG | + | chr7_1:68988036-68988055 | Msa1033750:three_prime_UTR | 15.0% |
| !! | AAAGAGAGAAAAATAATTGA+GGG | + | chr7_1:68984024-68984043 | Msa1033750:five_prime_UTR | 20.0% |
| !! | TATTCATTAAATGATGTATC+TGG | - | chr7_1:68984147-68984166 | None:intergenic | 20.0% |
| !!! | TTTTAGATATATAGAACGAT+TGG | + | chr7_1:68984666-68984685 | Msa1033750:intron | 20.0% |
| !! | TTTAGATATATAGAACGATT+GGG | + | chr7_1:68984667-68984686 | Msa1033750:intron | 20.0% |
| !! | AAAATGTAAGAGACTAATTT+GGG | + | chr7_1:68985166-68985185 | Msa1033750:intron | 20.0% |
| !!! | TTCACTCTAGATTTTTTTTA+TGG | + | chr7_1:68985250-68985269 | Msa1033750:intron | 20.0% |
| !!! | TCACTCTAGATTTTTTTTAT+GGG | + | chr7_1:68985251-68985270 | Msa1033750:intron | 20.0% |
| !!! | TTTTAGAAAAAGGTAACTAT+TGG | - | chr7_1:68985639-68985658 | None:intergenic | 20.0% |
| !! | CAAACTGATAAAACAAAATA+CGG | - | chr7_1:68985922-68985941 | None:intergenic | 20.0% |
| !! | AAATTGGGTGAAAATTTAAA+TGG | + | chr7_1:68986804-68986823 | Msa1033750:intron | 20.0% |
| !! | AATTGGGTGAAAATTTAAAT+GGG | + | chr7_1:68986805-68986824 | Msa1033750:intron | 20.0% |
| !! | AAATATAAATAACTGTCAAG+AGG | - | chr7_1:68986951-68986970 | None:intergenic | 20.0% |
| !! | AAAATCATTATTCAAATGCA+TGG | - | chr7_1:68986995-68987014 | None:intergenic | 20.0% |
| !!! | GATGCATAAGAAAATTTTAT+TGG | + | chr7_1:68987342-68987361 | Msa1033750:intron | 20.0% |
| !!! | ATAAGAAAATTTTATTGGAG+TGG | + | chr7_1:68987347-68987366 | Msa1033750:intron | 20.0% |
| !!! | CCTACATAAGAATTAATTTT+GGG | - | chr7_1:68987415-68987434 | None:intergenic | 20.0% |
| !!! | ACCTACATAAGAATTAATTT+TGG | - | chr7_1:68987416-68987435 | None:intergenic | 20.0% |
| !! | TTATAAAATAGTCATACCAA+TGG | - | chr7_1:68987531-68987550 | None:intergenic | 20.0% |
| !!! | ATAGCATTGTTTCTATTTTT+TGG | - | chr7_1:68987702-68987721 | None:intergenic | 20.0% |
| !! | AAAAAAATAATAAACAGCAG+TGG | - | chr7_1:68987819-68987838 | None:intergenic | 20.0% |
| !! | TAATAAATAAAATAAACCGG+TGG | + | chr7_1:68988205-68988224 | Msa1033750:three_prime_UTR | 20.0% |
| ! | GAAAGAGAGAAAAATAATTG+AGG | + | chr7_1:68984023-68984042 | Msa1033750:five_prime_UTR | 25.0% |
| !! | AAGGGTGTATGTAATAAAAT+AGG | - | chr7_1:68984051-68984070 | None:intergenic | 25.0% |
| ! | GATTATAGAAGATCTCTTTA+CGG | + | chr7_1:68984492-68984511 | Msa1033750:CDS | 25.0% |
| ! | TTAGATATATAGAACGATTG+GGG | + | chr7_1:68984668-68984687 | Msa1033750:intron | 25.0% |
| ! | TTCTTTGGATTGAAAATTTC+TGG | + | chr7_1:68984925-68984944 | Msa1033750:intron | 25.0% |
| !!! | AAAATGCTATTTCAATGGTT+TGG | + | chr7_1:68984982-68985001 | Msa1033750:intron | 25.0% |
| ! | GAAAATGTAAGAGACTAATT+TGG | + | chr7_1:68985165-68985184 | Msa1033750:intron | 25.0% |
| ! | TTTATACAGAGACAGAAAAA+AGG | - | chr7_1:68985389-68985408 | None:intergenic | 25.0% |
| !!! | GAGTGGGATTTTATTTTTTT+TGG | + | chr7_1:68985691-68985710 | Msa1033750:intron | 25.0% |
| ! | ACAAGAAAATGAAATTTCCA+AGG | + | chr7_1:68986174-68986193 | Msa1033750:intron | 25.0% |
| ! | CATGTATATATACATGTATC+TGG | + | chr7_1:68986271-68986290 | Msa1033750:intron | 25.0% |
| !!! | TTTCTTTCCCAAAGATTTTT+TGG | - | chr7_1:68986375-68986394 | None:intergenic | 25.0% |
| !! | AAAAATCTTTGGGAAAGAAA+TGG | + | chr7_1:68986375-68986394 | Msa1033750:intron | 25.0% |
| ! | TGAGGAATATTGAAGTAAAT+TGG | + | chr7_1:68986788-68986807 | Msa1033750:intron | 25.0% |
| ! | GAGGAATATTGAAGTAAATT+GGG | + | chr7_1:68986789-68986808 | Msa1033750:intron | 25.0% |
| ! | ATTGGGTGAAAATTTAAATG+GGG | + | chr7_1:68986806-68986825 | Msa1033750:intron | 25.0% |
| !! | GCATTTGAATAATGATTTTG+CGG | + | chr7_1:68986996-68987015 | Msa1033750:intron | 25.0% |
| ! | TTCAGAAATATAGTTGGATT+TGG | - | chr7_1:68987159-68987178 | None:intergenic | 25.0% |
| !! | ACATAAGAATTAATTTTGGG+AGG | - | chr7_1:68987412-68987431 | None:intergenic | 25.0% |
| ! | CCCAAAATTAATTCTTATGT+AGG | + | chr7_1:68987412-68987431 | Msa1033750:intron | 25.0% |
| !!! | TTCTATTTTTTGGCTAACTA+GGG | - | chr7_1:68987692-68987711 | None:intergenic | 25.0% |
| !!! | TTTCTATTTTTTGGCTAACT+AGG | - | chr7_1:68987693-68987712 | None:intergenic | 25.0% |
| ! | TGCTATTCTGTTACAAATTT+AGG | + | chr7_1:68987716-68987735 | Msa1033750:intron | 25.0% |
| ! | GCTATTCTGTTACAAATTTA+GGG | + | chr7_1:68987717-68987736 | Msa1033750:intron | 25.0% |
| ! | TTACAAATTTAGGGAAAACA+GGG | + | chr7_1:68987726-68987745 | Msa1033750:intron | 25.0% |
| !!! | CATACATTTTTGGATCATAT+TGG | - | chr7_1:68987780-68987799 | None:intergenic | 25.0% |
| ! | AACTTATGAAACAGAAATGA+AGG | + | chr7_1:68988109-68988128 | Msa1033750:three_prime_UTR | 25.0% |
| ! | TTTACTCAAAATTAATCCAC+CGG | - | chr7_1:68988224-68988243 | None:intergenic | 25.0% |
| ! | TTTTATCTCTCGTTCTAATG+CGG | - | chr7_1:68983973-68983992 | None:intergenic | 30.0% |
| ATATGGTGTGAATTATTCAG+AGG | + | chr7_1:68984695-68984714 | Msa1033750:CDS | 30.0% | |
| AGATTATCAATGGCTTTCTT+TGG | + | chr7_1:68984910-68984929 | Msa1033750:intron | 30.0% | |
| ! | CCATTGAAATAGCATTTTGA+AGG | - | chr7_1:68984980-68984999 | None:intergenic | 30.0% |
| !! | CCTTCAAAATGCTATTTCAA+TGG | + | chr7_1:68984977-68984996 | Msa1033750:intron | 30.0% |
| !! | AGTCTTTCACAATTTTTGAG+TGG | + | chr7_1:68985029-68985048 | Msa1033750:intron | 30.0% |
| !!! | GTCTTTCACAATTTTTGAGT+GGG | + | chr7_1:68985030-68985049 | Msa1033750:intron | 30.0% |
| ! | TTTGGGCATAATTTTTGTCA+AGG | - | chr7_1:68985066-68985085 | None:intergenic | 30.0% |
| AAAAAGTCAGGGACTAATTT+GGG | - | chr7_1:68985083-68985102 | None:intergenic | 30.0% | |
| AAAATTGTGAGCAACTGATT+TGG | + | chr7_1:68985224-68985243 | Msa1033750:intron | 30.0% | |
| CTTTGCAGATATGTTAATGA+TGG | + | chr7_1:68985510-68985529 | Msa1033750:intron | 30.0% | |
| TACATAGTGAGTAATTCTAC+TGG | + | chr7_1:68985549-68985568 | Msa1033750:CDS | 30.0% | |
| TAGAAAAAGGTAACTATTGG+AGG | - | chr7_1:68985636-68985655 | None:intergenic | 30.0% | |
| !! | TTGTGTCAAATTTTGACACT+CGG | + | chr7_1:68985804-68985823 | Msa1033750:CDS | 30.0% |
| GACTACTATATACTACAAGT+TGG | - | chr7_1:68986060-68986079 | None:intergenic | 30.0% | |
| AATACAAAACACAATGGTTG+AGG | - | chr7_1:68986126-68986145 | None:intergenic | 30.0% | |
| TTCTTCTTGAATATTCAGTG+CGG | - | chr7_1:68986150-68986169 | None:intergenic | 30.0% | |
| !! | AGCTTGCATAAATTTTTCGA+GGG | - | chr7_1:68986299-68986318 | None:intergenic | 30.0% |
| ATCACTGCCAAAAAATCTTT+GGG | + | chr7_1:68986365-68986384 | Msa1033750:intron | 30.0% | |
| !! | ACAGTTCTAAGAATTGCATT+GGG | - | chr7_1:68986610-68986629 | None:intergenic | 30.0% |
| !! | TACAGTTCTAAGAATTGCAT+TGG | - | chr7_1:68986611-68986630 | None:intergenic | 30.0% |
| TGCAATTCTTAGAACTGTAT+TGG | + | chr7_1:68986612-68986631 | Msa1033750:intron | 30.0% | |
| AATTCTTAGAACTGTATTGG+AGG | + | chr7_1:68986615-68986634 | Msa1033750:intron | 30.0% | |
| GTTTCAAATGTAAGCATGTT+TGG | - | chr7_1:68986704-68986723 | None:intergenic | 30.0% | |
| ! | CATGCTTACATTTGAAACAA+TGG | + | chr7_1:68986706-68986725 | Msa1033750:intron | 30.0% |
| ! | TTTGAAACAATGGATTTGCA+TGG | + | chr7_1:68986716-68986735 | Msa1033750:intron | 30.0% |
| ! | TTGAAACAATGGATTTGCAT+GGG | + | chr7_1:68986717-68986736 | Msa1033750:intron | 30.0% |
| TGATACATCTTCAATGCTAA+GGG | - | chr7_1:68986753-68986772 | None:intergenic | 30.0% | |
| TTGATACATCTTCAATGCTA+AGG | - | chr7_1:68986754-68986773 | None:intergenic | 30.0% | |
| AATTTAAATGGGGACTTTGA+TGG | + | chr7_1:68986816-68986835 | Msa1033750:intron | 30.0% | |
| TGATGGCTAAAAGAAGAATT+TGG | + | chr7_1:68986833-68986852 | Msa1033750:intron | 30.0% | |
| GAATCATTCAATAGATTCTG+TGG | + | chr7_1:68986872-68986891 | Msa1033750:intron | 30.0% | |
| CAACTCCTCAAAGTTAATAT+TGG | - | chr7_1:68986911-68986930 | None:intergenic | 30.0% | |
| ! | CAATATTAACTTTGAGGAGT+TGG | + | chr7_1:68986909-68986928 | Msa1033750:intron | 30.0% |
| ATGAGTTCATAAATCAGCTA+TGG | - | chr7_1:68987073-68987092 | None:intergenic | 30.0% | |
| ATGATCGTCGAAATGATATA+TGG | + | chr7_1:68987229-68987248 | Msa1033750:CDS | 30.0% | |
| TGATCGTCGAAATGATATAT+GGG | + | chr7_1:68987230-68987249 | Msa1033750:CDS | 30.0% | |
| ! | AAGTGATGTTCACTCTTTTA+AGG | + | chr7_1:68987290-68987309 | Msa1033750:CDS | 30.0% |
| TCTATACAGTATACACAACT+GGG | - | chr7_1:68987482-68987501 | None:intergenic | 30.0% | |
| TTCTATACAGTATACACAAC+TGG | - | chr7_1:68987483-68987502 | None:intergenic | 30.0% | |
| GTTGTGTATACTGTATAGAA+TGG | + | chr7_1:68987483-68987502 | Msa1033750:intron | 30.0% | |
| AAAATAGTCATACCAATGGT+TGG | - | chr7_1:68987527-68987546 | None:intergenic | 30.0% | |
| AATCAAGGGATTGTATAGAA+TGG | - | chr7_1:68987615-68987634 | None:intergenic | 30.0% | |
| GTTACAAATTTAGGGAAAAC+AGG | + | chr7_1:68987725-68987744 | Msa1033750:intron | 30.0% | |
| AAGGATATACTTGTCAGATA+GGG | - | chr7_1:68987753-68987772 | None:intergenic | 30.0% | |
| TAAGGATATACTTGTCAGAT+AGG | - | chr7_1:68987754-68987773 | None:intergenic | 30.0% | |
| TTTGGATCATATTGGACATA+AGG | - | chr7_1:68987772-68987791 | None:intergenic | 30.0% | |
| ! | CCATATAAGGCATACATTTT+TGG | - | chr7_1:68987790-68987809 | None:intergenic | 30.0% |
| CCAAAAATGTATGCCTTATA+TGG | + | chr7_1:68987787-68987806 | Msa1033750:intron | 30.0% | |
| TTTATGCTACAAGTTCAAGA+AGG | + | chr7_1:68987995-68988014 | Msa1033750:three_prime_UTR | 30.0% | |
| !!! | ACAGATTTTCTAAAGCTACA+AGG | + | chr7_1:68988177-68988196 | Msa1033750:three_prime_UTR | 30.0% |
| TCTTCACATTGGAAATGAGT+TGG | - | chr7_1:68984291-68984310 | None:intergenic | 35.0% | |
| TGTTCTTAGCTTCTTCACAT+TGG | - | chr7_1:68984302-68984321 | None:intergenic | 35.0% | |
| GAACAAATAACGAACGAACA+TGG | + | chr7_1:68984317-68984336 | Msa1033750:exon | 35.0% | |
| AAGAGCTTATAGTCAACCTT+GGG | + | chr7_1:68984740-68984759 | Msa1033750:CDS | 35.0% | |
| GAAAAAGTCAGGGACTAATT+TGG | - | chr7_1:68985084-68985103 | None:intergenic | 35.0% | |
| TCCCTAACTCATTGTATTAG+AGG | + | chr7_1:68985122-68985141 | Msa1033750:intron | 35.0% | |
| CCCTCTAATACAATGAGTTA+GGG | - | chr7_1:68985126-68985145 | None:intergenic | 35.0% | |
| CCCTAACTCATTGTATTAGA+GGG | + | chr7_1:68985123-68985142 | Msa1033750:intron | 35.0% | |
| TCCCTCTAATACAATGAGTT+AGG | - | chr7_1:68985127-68985146 | None:intergenic | 35.0% | |
| TAACTCATTGTATTAGAGGG+AGG | + | chr7_1:68985126-68985145 | Msa1033750:intron | 35.0% | |
| !!! | ATTTGGGCTTACTTTTTGTC+AGG | + | chr7_1:68985182-68985201 | Msa1033750:intron | 35.0% |
| !!! | TTTGGGCTTACTTTTTGTCA+GGG | + | chr7_1:68985183-68985202 | Msa1033750:intron | 35.0% |
| ! | AGTTGCTCACAATTTTCTTG+CGG | - | chr7_1:68985220-68985239 | None:intergenic | 35.0% |
| !! | TTTTTATGGGTCTGACTTGT+TGG | + | chr7_1:68985264-68985283 | Msa1033750:intron | 35.0% |
| !!! | TTTTATGGGTCTGACTTGTT+GGG | + | chr7_1:68985265-68985284 | Msa1033750:intron | 35.0% |
| !!! | GTAGCGTTTTTAGTACATAC+TGG | + | chr7_1:68985308-68985327 | Msa1033750:intron | 35.0% |
| ATACAGAGACAGAAAAAAGG+AGG | - | chr7_1:68985386-68985405 | None:intergenic | 35.0% | |
| TTAATGATGGTAGACCTTTC+TGG | + | chr7_1:68985523-68985542 | Msa1033750:CDS | 35.0% | |
| TAACTACTATACGACTGACA+AGG | + | chr7_1:68985605-68985624 | Msa1033750:CDS | 35.0% | |
| CAGATTGAAAACAGGAAAAG+AGG | - | chr7_1:68985672-68985691 | None:intergenic | 35.0% | |
| ! | TTTCCTGTTTTCAATCTGAG+TGG | + | chr7_1:68985674-68985693 | Msa1033750:intron | 35.0% |
| ! | TTCCTGTTTTCAATCTGAGT+GGG | + | chr7_1:68985675-68985694 | Msa1033750:intron | 35.0% |
| ! | TTTGGCATTTTATCATCCAC+AGG | + | chr7_1:68985709-68985728 | Msa1033750:intron | 35.0% |
| TTGAACACTTCTTCTGTGTT+AGG | - | chr7_1:68985752-68985771 | None:intergenic | 35.0% | |
| TTCAAAGCTCTTAGAAACTC+AGG | + | chr7_1:68985767-68985786 | Msa1033750:CDS | 35.0% | |
| TAGAAACTCAGGTGTGAAAT+TGG | + | chr7_1:68985778-68985797 | Msa1033750:CDS | 35.0% | |
| TAGCATGCATCAATAGATGA+GGG | - | chr7_1:68985971-68985990 | None:intergenic | 35.0% | |
| TGCGGAAATACAAAACACAA+TGG | - | chr7_1:68986132-68986151 | None:intergenic | 35.0% | |
| ! | GAGCTTGCATAAATTTTTCG+AGG | - | chr7_1:68986300-68986319 | None:intergenic | 35.0% |
| CATCACTGCCAAAAAATCTT+TGG | + | chr7_1:68986364-68986383 | Msa1033750:intron | 35.0% | |
| ! | AATCTTTGGGAAAGAAATGG+TGG | + | chr7_1:68986378-68986397 | Msa1033750:intron | 35.0% |
| AGATTATGCTTTCACTATCG+TGG | - | chr7_1:68986488-68986507 | None:intergenic | 35.0% | |
| CTTCACAGTTGACATATTTG+TGG | - | chr7_1:68986550-68986569 | None:intergenic | 35.0% | |
| ! | TAAGCATGTTTGGTTCAATG+GGG | - | chr7_1:68986694-68986713 | None:intergenic | 35.0% |
| ! | GTAAGCATGTTTGGTTCAAT+GGG | - | chr7_1:68986695-68986714 | None:intergenic | 35.0% |
| ! | TGTAAGCATGTTTGGTTCAA+TGG | - | chr7_1:68986696-68986715 | None:intergenic | 35.0% |
| ! | TCAAGTATTGCATGCAATTG+AGG | + | chr7_1:68986770-68986789 | Msa1033750:intron | 35.0% |
| TGCTGCCAATATTAACTTTG+AGG | + | chr7_1:68986903-68986922 | Msa1033750:intron | 35.0% | |
| TTGGTATGCCTATTTCATAC+AGG | + | chr7_1:68987119-68987138 | Msa1033750:intron | 35.0% | |
| TGCTTCAACCTGTATGAAAT+AGG | - | chr7_1:68987130-68987149 | None:intergenic | 35.0% | |
| CACGCTTTCAGAAATATAGT+TGG | - | chr7_1:68987165-68987184 | None:intergenic | 35.0% | |
| ACTATTGGATGTAAAACCTG+AGG | + | chr7_1:68987188-68987207 | Msa1033750:CDS | 35.0% | |
| GATCGTCGAAATGATATATG+GGG | + | chr7_1:68987231-68987250 | Msa1033750:CDS | 35.0% | |
| !! | TGATGTTCACTCTTTTAAGG+AGG | + | chr7_1:68987293-68987312 | Msa1033750:CDS | 35.0% |
| ! | AAATTCAGGTTCTTACTGCT+GGG | + | chr7_1:68987443-68987462 | Msa1033750:intron | 35.0% |
| ! | TACCAATGGTTGGATTTTGA+TGG | - | chr7_1:68987517-68987536 | None:intergenic | 35.0% |
| ! | TTTGGACTTTTGGTCTATGA+TGG | - | chr7_1:68987581-68987600 | None:intergenic | 35.0% |
| ATTGACATGTGGGAAATCAA+GGG | - | chr7_1:68987629-68987648 | None:intergenic | 35.0% | |
| AATTGACATGTGGGAAATCA+AGG | - | chr7_1:68987630-68987649 | None:intergenic | 35.0% | |
| ATTGGGAATTTGGTATCTGA+GGG | - | chr7_1:68987661-68987680 | None:intergenic | 35.0% | |
| TATTGGGAATTTGGTATCTG+AGG | - | chr7_1:68987662-68987681 | None:intergenic | 35.0% | |
| AGATACCAAATTCCCAATAG+AGG | + | chr7_1:68987663-68987682 | Msa1033750:intron | 35.0% | |
| ! | GCAGTGGATTTATCCATATA+AGG | - | chr7_1:68987803-68987822 | None:intergenic | 35.0% |
| !! | GCATAAACATTTTTCAGACC+TGG | - | chr7_1:68987982-68988001 | None:intergenic | 35.0% |
| ! | TGAAACAGAAATGAAGGTGT+AGG | + | chr7_1:68988115-68988134 | Msa1033750:three_prime_UTR | 35.0% |
| CGCACGGAATCGATATTTAA+CGG | - | chr7_1:68984222-68984241 | None:intergenic | 40.0% | |
| GTATGAAACATGTGAACGAG+TGG | + | chr7_1:68984253-68984272 | Msa1033750:five_prime_UTR | 40.0% | |
| ! | TTTGGTGAGTGACTTGGATT+TGG | - | chr7_1:68984376-68984395 | None:intergenic | 40.0% |
| AATCCAAGTCACTCACCAAA+TGG | + | chr7_1:68984376-68984395 | Msa1033750:CDS | 40.0% | |
| GAATGAATTACCTGAGCCAT+GGG | - | chr7_1:68984579-68984598 | None:intergenic | 40.0% | |
| TGAATGAATTACCTGAGCCA+TGG | - | chr7_1:68984580-68984599 | None:intergenic | 40.0% | |
| AGAACGATTGGGGAGAAATA+TGG | + | chr7_1:68984678-68984697 | Msa1033750:CDS | 40.0% | |
| GAAGAGCTTATAGTCAACCT+TGG | + | chr7_1:68984739-68984758 | Msa1033750:CDS | 40.0% | |
| AGAGCTTATAGTCAACCTTG+GGG | + | chr7_1:68984741-68984760 | Msa1033750:CDS | 40.0% | |
| !!! | GGATTTTGATTTTGCCCTGT+TGG | + | chr7_1:68984946-68984965 | Msa1033750:intron | 40.0% |
| !! | TGAAGGTACTTTCACCAACA+GGG | - | chr7_1:68984963-68984982 | None:intergenic | 40.0% |
| !! | TTGAAGGTACTTTCACCAAC+AGG | - | chr7_1:68984964-68984983 | None:intergenic | 40.0% |
| !!! | AGTCCCTGACTTTTTCAAAC+CGG | + | chr7_1:68985088-68985107 | Msa1033750:intron | 40.0% |
| ! | TCTCCGGTTTGAAAAAGTCA+GGG | - | chr7_1:68985094-68985113 | None:intergenic | 40.0% |
| ! | GTTAGGGACTAATTTGTCTC+CGG | - | chr7_1:68985110-68985129 | None:intergenic | 40.0% |
| ! | GTTGCTCACAATTTTCTTGC+GGG | - | chr7_1:68985219-68985238 | None:intergenic | 40.0% |
| CTCACTATGTATTGCCAGAA+AGG | - | chr7_1:68985540-68985559 | None:intergenic | 40.0% | |
| ! | GAGTAATTCTACTGGCTGTT+CGG | + | chr7_1:68985557-68985576 | Msa1033750:CDS | 40.0% |
| ATCCCACTCAGATTGAAAAC+AGG | - | chr7_1:68985680-68985699 | None:intergenic | 40.0% | |
| ! | CATTTTATCATCCACAGGCA+TGG | + | chr7_1:68985714-68985733 | Msa1033750:intron | 40.0% |
| CTTCTGTGTTAGGATCACAT+AGG | - | chr7_1:68985742-68985761 | None:intergenic | 40.0% | |
| GGGCATTAAACTGTGATGAT+TGG | + | chr7_1:68985843-68985862 | Msa1033750:CDS | 40.0% | |
| AGCATGCATCAATAGATGAG+GGG | - | chr7_1:68985970-68985989 | None:intergenic | 40.0% | |
| CTAGCATGCATCAATAGATG+AGG | - | chr7_1:68985972-68985991 | None:intergenic | 40.0% | |
| ! | TGCATGCTAGTATTTCTGCA+TGG | + | chr7_1:68985982-68986001 | Msa1033750:intron | 40.0% |
| ! | ATGCTAGTATTTCTGCATGG+CGG | + | chr7_1:68985985-68986004 | Msa1033750:intron | 40.0% |
| TAGTCGTAACTTCCTCACTT+TGG | + | chr7_1:68986075-68986094 | Msa1033750:intron | 40.0% | |
| AGTCGTAACTTCCTCACTTT+GGG | + | chr7_1:68986076-68986095 | Msa1033750:intron | 40.0% | |
| AAAACACAATGGTTGAGGAG+TGG | - | chr7_1:68986121-68986140 | None:intergenic | 40.0% | |
| TAACTTTCCACCATCACACT+TGG | + | chr7_1:68986228-68986247 | Msa1033750:intron | 40.0% | |
| AACAAATGAGCCAAGTGTGA+TGG | - | chr7_1:68986241-68986260 | None:intergenic | 40.0% | |
| GCATCTTGCAGAAACATGTT+AGG | + | chr7_1:68986434-68986453 | Msa1033750:intron | 40.0% | |
| TCTTAGAACTGTATTGGAGG+AGG | + | chr7_1:68986618-68986637 | Msa1033750:intron | 40.0% | |
| ! | AAGCATGTTTGGTTCAATGG+GGG | - | chr7_1:68986693-68986712 | None:intergenic | 40.0% |
| AATCAGCTATGGAGCAGAAA+AGG | - | chr7_1:68987062-68987081 | None:intergenic | 40.0% | |
| ! | TCTGAAAGCGTGTGAACTAT+TGG | + | chr7_1:68987173-68987192 | Msa1033750:CDS | 40.0% |
| TTTATTGGAGTGGAGACTAG+AGG | + | chr7_1:68987357-68987376 | Msa1033750:intron | 40.0% | |
| TTATTGGAGTGGAGACTAGA+GGG | + | chr7_1:68987358-68987377 | Msa1033750:intron | 40.0% | |
| !! | AGGATGTTTTATTCTCCCCT+AGG | - | chr7_1:68987392-68987411 | None:intergenic | 40.0% |
| AGTAAGAACCTGAATTTGCG+AGG | - | chr7_1:68987440-68987459 | None:intergenic | 40.0% | |
| ! | CAAATTCAGGTTCTTACTGC+TGG | + | chr7_1:68987442-68987461 | Msa1033750:intron | 40.0% |
| !!! | GGTTGGATTTTGATGGACTA+TGG | - | chr7_1:68987510-68987529 | None:intergenic | 40.0% |
| GTCCATCAAAATCCAACCAT+TGG | + | chr7_1:68987512-68987531 | Msa1033750:intron | 40.0% | |
| !!! | CCTCATGAGTTTTGGACTTT+TGG | - | chr7_1:68987591-68987610 | None:intergenic | 40.0% |
| CCAAAAGTCCAAAACTCATG+AGG | + | chr7_1:68987588-68987607 | Msa1033750:intron | 40.0% | |
| ! | AGAATGGTCCTCATGAGTTT+TGG | - | chr7_1:68987599-68987618 | None:intergenic | 40.0% |
| GGAAGGAGAAATTGACATGT+GGG | - | chr7_1:68987639-68987658 | None:intergenic | 40.0% | |
| TTGGGAATTTGGTATCTGAG+GGG | - | chr7_1:68987660-68987679 | None:intergenic | 40.0% | |
| TAACTAGGGAGACCTCTATT+GGG | - | chr7_1:68987678-68987697 | None:intergenic | 40.0% | |
| ! | ACAGAAATGAAGGTGTAGGT+AGG | + | chr7_1:68988119-68988138 | Msa1033750:three_prime_UTR | 40.0% |
| GCTCTTCTTGTTGATGCTGT+TGG | + | chr7_1:68984531-68984550 | Msa1033750:CDS | 45.0% | |
| TGTTCTTCCTTCTCAACCCA+TGG | + | chr7_1:68984560-68984579 | Msa1033750:CDS | 45.0% | |
| ! | GTCTCCGGTTTGAAAAAGTC+AGG | - | chr7_1:68985095-68985114 | None:intergenic | 45.0% |
| ATGCATCAATAGATGAGGGG+GGG | - | chr7_1:68985967-68985986 | None:intergenic | 45.0% | |
| CATGCATCAATAGATGAGGG+GGG | - | chr7_1:68985968-68985987 | None:intergenic | 45.0% | |
| GCATGCATCAATAGATGAGG+GGG | - | chr7_1:68985969-68985988 | None:intergenic | 45.0% | |
| ! | TGCTAGTATTTCTGCATGGC+GGG | + | chr7_1:68985986-68986005 | Msa1033750:intron | 45.0% |
| ! | TTCCTCACTTTGGGTTAAGC+AGG | + | chr7_1:68986085-68986104 | Msa1033750:intron | 45.0% |
| ! | TCCTCACTTTGGGTTAAGCA+GGG | + | chr7_1:68986086-68986105 | Msa1033750:intron | 45.0% |
| GTTCAAGCGAGTTTGAACCT+TGG | - | chr7_1:68986194-68986213 | None:intergenic | 45.0% | |
| AAATGAGCCAAGTGTGATGG+TGG | - | chr7_1:68986238-68986257 | None:intergenic | 45.0% | |
| TCGATACAGTAAGTTCAGCG+AGG | - | chr7_1:68986322-68986341 | None:intergenic | 45.0% | |
| CTGAGGATGCTGTTCATGTT+GGG | + | chr7_1:68987205-68987224 | Msa1033750:CDS | 45.0% | |
| TGAGGATGCTGTTCATGTTG+GGG | + | chr7_1:68987206-68987225 | Msa1033750:CDS | 45.0% | |
| TGTAGGTACCTCGCAAATTC+AGG | + | chr7_1:68987429-68987448 | Msa1033750:intron | 45.0% | |
| GGGAAGGAGAAATTGACATG+TGG | - | chr7_1:68987640-68987659 | None:intergenic | 45.0% | |
| GAATTTGGTATCTGAGGGGA+AGG | - | chr7_1:68987656-68987675 | None:intergenic | 45.0% | |
| GGAGACCTCTATTGGGAATT+TGG | - | chr7_1:68987671-68987690 | None:intergenic | 45.0% | |
| CTAACTAGGGAGACCTCTAT+TGG | - | chr7_1:68987679-68987698 | None:intergenic | 45.0% | |
| ! | CTTGATTCTTTTGCTGACGC+AGG | + | chr7_1:68987937-68987956 | Msa1033750:intron | 45.0% |
| !! | TATTAATAAATAAAATAAAC+CGG | + | chr7_1:68988202-68988221 | Msa1033750:three_prime_UTR | 5.0% |
| CATACAACACTCGCATCGCA+CGG | - | chr7_1:68984238-68984257 | None:intergenic | 50.0% | |
| ! | GCACCATTTGGTGAGTGACT+TGG | - | chr7_1:68984382-68984401 | None:intergenic | 50.0% |
| CTGAGACGAGATTTACCCCA+AGG | - | chr7_1:68984759-68984778 | None:intergenic | 50.0% | |
| CTTGGGGTAAATCTCGTCTC+AGG | + | chr7_1:68984757-68984776 | Msa1033750:CDS | 50.0% | |
| !! | GTCTGACTTGTTGGGTTGAG+TGG | + | chr7_1:68985273-68985292 | Msa1033750:intron | 50.0% |
| CTCGGTTAAGACCTCTCTTG+CGG | + | chr7_1:68985822-68985841 | Msa1033750:CDS | 50.0% | |
| TCGGTTAAGACCTCTCTTGC+GGG | + | chr7_1:68985823-68985842 | Msa1033750:CDS | 50.0% | |
| CAGTTTAATGCCCGCAAGAG+AGG | - | chr7_1:68985836-68985855 | None:intergenic | 50.0% | |
| TGCTGTAGCAGTATCAGCTG+AGG | + | chr7_1:68985871-68985890 | Msa1033750:CDS | 50.0% | |
| ! | TAGTATTTCTGCATGGCGGG+TGG | + | chr7_1:68985989-68986008 | Msa1033750:intron | 50.0% |
| !! | AGTATTTCTGCATGGCGGGT+GGG | + | chr7_1:68985990-68986009 | Msa1033750:intron | 50.0% |
| ACCCTGCTTAACCCAAAGTG+AGG | - | chr7_1:68986090-68986109 | None:intergenic | 50.0% | |
| ATGGTTGAGGAGTGGAACAC+AGG | - | chr7_1:68986113-68986132 | None:intergenic | 50.0% | |
| GAAGCAGCTTAGCATGACTC+TGG | + | chr7_1:68986640-68986659 | Msa1033750:intron | 50.0% | |
| AACTGTCAAGAGGATCTCGC+AGG | - | chr7_1:68986941-68986960 | None:intergenic | 50.0% | |
| CCAACATGAACAGCATCCTC+AGG | - | chr7_1:68987207-68987226 | None:intergenic | 50.0% | |
| CCTGAGGATGCTGTTCATGT+TGG | + | chr7_1:68987204-68987223 | Msa1033750:CDS | 50.0% | |
| AGGCTGTGATGCATGGCTTT+GGG | + | chr7_1:68987266-68987285 | Msa1033750:CDS | 50.0% | |
| ! | TTCAGGTTCTTACTGCTGGG+TGG | + | chr7_1:68987446-68987465 | Msa1033750:intron | 50.0% |
| ! | TGGAGGAGTACGACGGTGAA+CGG | - | chr7_1:68984404-68984423 | None:intergenic | 55.0% |
| ! | GAGGAAGTGGAGGAGTACGA+CGG | - | chr7_1:68984411-68984430 | None:intergenic | 55.0% |
| TTCTTCAGCCACCACAGCTG+CGG | - | chr7_1:68984436-68984455 | None:intergenic | 55.0% | |
| TCCTTCTCAACCCATGGCTC+AGG | + | chr7_1:68984566-68984585 | Msa1033750:CDS | 55.0% | |
| ! | ACCTGAGCCATGGGTTGAGA+AGG | - | chr7_1:68984570-68984589 | None:intergenic | 55.0% |
| ! | TCACATAGGTGCCATGCCTG+TGG | - | chr7_1:68985728-68985747 | None:intergenic | 55.0% |
| GGGGGGAAGTGGAAAACATG+CGG | - | chr7_1:68985950-68985969 | None:intergenic | 55.0% | |
| CAATAGATGAGGGGGGGAAG+TGG | - | chr7_1:68985961-68985980 | None:intergenic | 55.0% | |
| ! | ATATGGGGTGCCAGAGATGC+AGG | + | chr7_1:68987246-68987265 | Msa1033750:CDS | 55.0% |
| TGCATCACAGCCTGCATCTC+TGG | - | chr7_1:68987259-68987278 | None:intergenic | 55.0% | |
| GAGATGCAGGCTGTGATGCA+TGG | + | chr7_1:68987259-68987278 | Msa1033750:CDS | 55.0% | |
| CAGGCTGTGATGCATGGCTT+TGG | + | chr7_1:68987265-68987284 | Msa1033750:CDS | 55.0% | |
| ! | GGCTGTGATGCATGGCTTTG+GGG | + | chr7_1:68987267-68987286 | Msa1033750:CDS | 55.0% |
| ACTAGAGGGCGAGTACACCT+AGG | + | chr7_1:68987372-68987391 | Msa1033750:intron | 55.0% | |
| CTAGAGGGCGAGTACACCTA+GGG | + | chr7_1:68987373-68987392 | Msa1033750:intron | 55.0% | |
| TAGAGGGCGAGTACACCTAG+GGG | + | chr7_1:68987374-68987393 | Msa1033750:intron | 55.0% | |
| ACGCAGGTAGCACAGAGGAT+TGG | + | chr7_1:68987953-68987972 | Msa1033750:intron | 55.0% | |
| ! | AGCACAGAGGATTGGTGTCC+AGG | + | chr7_1:68987961-68987980 | Msa1033750:CDS | 55.0% |
| CGACGGTGAACGGCACCATT+TGG | - | chr7_1:68984394-68984413 | None:intergenic | 60.0% | |
| TGCTGACGCAGGTAGCACAG+AGG | + | chr7_1:68987948-68987967 | Msa1033750:intron | 60.0% | |
| TTCAGCCACCACAGCTGCGG+CGG | - | chr7_1:68984433-68984452 | None:intergenic | 65.0% | |
| AGCTGCGGCGGAGGAAGTGG+AGG | - | chr7_1:68984421-68984440 | None:intergenic | 70.0% | |
| CACAGCTGCGGCGGAGGAAG+TGG | - | chr7_1:68984424-68984443 | None:intergenic | 70.0% | |
| CACTTCCTCCGCCGCAGCTG+TGG | + | chr7_1:68984422-68984441 | Msa1033750:CDS | 70.0% | |
| TTCCTCCGCCGCAGCTGTGG+TGG | + | chr7_1:68984425-68984444 | Msa1033750:CDS | 70.0% | |
| !! | CTGCATGGCGGGTGGGAGCA+TGG | + | chr7_1:68985997-68986016 | Msa1033750:intron | 70.0% |
| AGCCACCACAGCTGCGGCGG+AGG | - | chr7_1:68984430-68984449 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 68983839 | 68988244 | 68983839 | ID=Msa1033750;Name=Msa1033750 |
| chr7_1 | mRNA | 68983839 | 68988244 | 68983839 | ID=Msa1033750-mRNA-1;Parent=Msa1033750;Name=Msa1033750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=497|1|1|1|1|1|6|256|277 |
| chr7_1 | exon | 68983839 | 68984587 | 68983839 | ID=Msa1033750-mRNA-1:exon:16176;Parent=Msa1033750-mRNA-1 |
| chr7_1 | exon | 68984672 | 68984778 | 68984672 | ID=Msa1033750-mRNA-1:exon:16177;Parent=Msa1033750-mRNA-1 |
| chr7_1 | exon | 68985518 | 68985626 | 68985518 | ID=Msa1033750-mRNA-1:exon:16178;Parent=Msa1033750-mRNA-1 |
| chr7_1 | exon | 68985731 | 68985892 | 68985731 | ID=Msa1033750-mRNA-1:exon:16179;Parent=Msa1033750-mRNA-1 |
| chr7_1 | exon | 68987141 | 68987314 | 68987141 | ID=Msa1033750-mRNA-1:exon:16180;Parent=Msa1033750-mRNA-1 |
| chr7_1 | exon | 68987959 | 68988244 | 68987959 | ID=Msa1033750-mRNA-1:exon:16181;Parent=Msa1033750-mRNA-1 |
| chr7_1 | five_prime_UTR | 68983839 | 68984335 | 68983839 | ID=Msa1033750-mRNA-1:five_prime_utr;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68984336 | 68984587 | 68984336 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68984672 | 68984778 | 68984672 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68985518 | 68985626 | 68985518 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68985731 | 68985892 | 68985731 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68987141 | 68987314 | 68987141 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | CDS | 68987959 | 68987988 | 68987959 | ID=Msa1033750-mRNA-1:cds;Parent=Msa1033750-mRNA-1 |
| chr7_1 | three_prime_UTR | 68987989 | 68988244 | 68987989 | ID=Msa1033750-mRNA-1:three_prime_utr;Parent=Msa1033750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
