AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1374930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374930 MtrunA17_Chr1g0211561 98.272 926 15 1 1 925 1 926 0.0 1882
Msa1374930 MtrunA17_Chr2g0300341 44.811 607 283 6 313 914 174 733 6.28e-178 533
Msa1374930 MtrunA17_Chr3g0136161 39.403 670 344 10 253 909 144 764 1.72e-162 494
Msa1374930 MtrunA17_Chr3g0136211 40.147 680 339 11 253 916 143 770 1.21e-159 487
Msa1374930 MtrunA17_Chr8g0369461 42.139 617 308 7 301 916 130 698 1.05e-154 472
Msa1374930 MtrunA17_Chr3g0136141 40.902 643 313 14 289 914 143 735 4.79e-151 463
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374930 AT1G78610.1 57.314 916 274 14 49 922 10 850 0.0 953
Msa1374930 AT2G17010.1 53.669 954 351 21 5 921 4 903 0.0 912
Msa1374930 AT1G53470.1 55.408 906 329 19 49 920 11 875 0.0 907
Msa1374930 AT3G14810.1 54.045 927 309 19 49 920 11 875 0.0 901
Msa1374930 AT3G14810.2 51.456 927 298 21 49 920 11 840 0.0 827
Msa1374930 AT2G17000.2 51.775 873 342 14 56 921 36 836 0.0 818
Msa1374930 AT2G17000.1 51.775 873 342 14 56 921 36 836 0.0 816
Msa1374930 AT2G17010.2 46.893 708 266 20 4 665 3 646 0.0 548
Msa1374930 AT5G12080.1 41.824 636 317 8 276 906 143 730 4.02e-170 513
Msa1374930 AT5G12080.2 41.824 636 317 8 276 906 143 730 4.02e-170 513
Msa1374930 AT5G12080.3 41.824 636 317 8 276 906 143 730 4.02e-170 513
Msa1374930 AT5G19520.1 38.715 607 321 6 302 906 181 738 9.88e-150 461
Msa1374930 AT5G19520.2 38.715 607 321 6 302 906 181 738 9.88e-150 461
Msa1374930 AT1G49260.1 28.926 121 81 3 373 491 5 122 4.67e-11 62.4

Find 249 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCCTTCAAATAGATTTA+TGG 0.106249 tig0019615:-85419 None:intergenic
TTCCAAGCCGACACGTTATT+TGG 0.141191 tig0019615:-84613 None:intergenic
CCCATTATCATCAGATTTCT+TGG 0.159517 tig0019615:-84539 None:intergenic
CCATTATCATACTGGTTATT+TGG 0.196571 tig0019615:+86046 Msa1374930:CDS
AGAAAACACATTTCAGTCTT+TGG 0.216359 tig0019615:+83810 Msa1374930:CDS
TTCTCTCCAAATCTTGTTAT+TGG 0.218451 tig0019615:-83123 None:intergenic
GGTTATTTGGCTCTTGATAT+TGG 0.220545 tig0019615:+86059 Msa1374930:CDS
TTTGAAGGAGCGTCTGATTC+TGG 0.222745 tig0019615:+85430 Msa1374930:CDS
GGAAAATCCTCTTCCATAAA+AGG 0.232230 tig0019615:-83776 None:intergenic
TGGTTTCTGATTGGGTTATT+AGG 0.232570 tig0019615:+83978 Msa1374930:CDS
TAAAACTAAGTCCAGATTAA+TGG 0.259824 tig0019615:+83652 Msa1374930:CDS
TCCAAGAAATCTGATGATAA+TGG 0.259886 tig0019615:+84538 Msa1374930:CDS
CTCTGTGGCAGCTTAAGTTT+TGG 0.268313 tig0019615:+83915 Msa1374930:CDS
AGAATTGAAAGGGTCTTTCT+AGG 0.285153 tig0019615:-82730 None:intergenic
GTCTTTGGATTCTTCTTGAA+TGG 0.297980 tig0019615:+83825 Msa1374930:CDS
GTCTTGGTTGCATTTATATT+CGG 0.298230 tig0019615:+86126 Msa1374930:CDS
TTGTCCAGGTTAATGCCTTC+AGG 0.299126 tig0019615:+85941 Msa1374930:intron
TCAATATGTGACCAAGGTTT+TGG 0.301334 tig0019615:+84171 Msa1374930:CDS
TATGAAGAGGTTAATGAATA+TGG 0.306929 tig0019615:+84636 Msa1374930:CDS
ATAGTTTGCATCACAGGGTT+AGG 0.308441 tig0019615:-82921 None:intergenic
CAGAAAAGAAAGTAGGTATT+TGG 0.316221 tig0019615:-82817 None:intergenic
AACACTCTCGGGGCCGCCTT+TGG 0.329276 tig0019615:+84324 Msa1374930:CDS
CTTAGTTGCCATTATCATAC+TGG 0.329463 tig0019615:+86038 Msa1374930:CDS
AATGACGACGGTCGTGATTA+GGG 0.330012 tig0019615:-83517 None:intergenic
CCAAGAAATCTGATGATAAT+GGG 0.332159 tig0019615:+84539 Msa1374930:CDS
TCCACGTTTAACTAAACTTT+AGG 0.333542 tig0019615:+82846 Msa1374930:five_prime_UTR
CCCAAGCCAATAACAAGATT+TGG 0.335913 tig0019615:+83117 Msa1374930:CDS
TATGTCATTGGACATGGATT+TGG 0.336553 tig0019615:+83283 Msa1374930:CDS
GCAAATCCGCGTTGAAGAAC+TGG 0.338974 tig0019615:+85461 Msa1374930:CDS
GAATGACGACGGTCGTGATT+AGG 0.339038 tig0019615:-83518 None:intergenic
GTTGAAAACTCTAGTGGTTA+AGG 0.339854 tig0019615:+84225 Msa1374930:CDS
ATGTGAGTACATACTTTGAT+AGG 0.348611 tig0019615:+84266 Msa1374930:CDS
TCCAAATCTTGTTATTGGCT+TGG 0.354363 tig0019615:-83118 None:intergenic
CCAAATAACCAGTATGATAA+TGG 0.354637 tig0019615:-86046 None:intergenic
TTAGTAGCAAGGACACTGTT+AGG 0.356809 tig0019615:-86412 None:intergenic
CCAAATCTTGTTATTGGCTT+GGG 0.357939 tig0019615:-83117 None:intergenic
ACAATCACAAATTGAGTAGA+AGG 0.360639 tig0019615:+86916 Msa1374930:exon
GGGATTGGGAATGGTGGTGG+TGG 0.363657 tig0019615:+84559 Msa1374930:CDS
TGCAAAATTGTGTTTGGTTA+GGG 0.370280 tig0019615:+84080 Msa1374930:CDS
TGTTCTAATATGTGGTAGAT+TGG 0.372968 tig0019615:+83958 Msa1374930:CDS
AAAGAACCCTCTTTCTCAAT+AGG 0.374828 tig0019615:-84030 None:intergenic
GTGCAAAATTGTGTTTGGTT+AGG 0.376067 tig0019615:+84079 Msa1374930:CDS
AACCTTCCACTCTTGATGTT+AGG 0.378450 tig0019615:-84454 None:intergenic
TTTATGTAAAGAGTTTCTTA+TGG 0.381078 tig0019615:+87019 Msa1374930:three_prime_UTR
AAGTTTGTTCACTGCGGTTT+TGG 0.385413 tig0019615:-85998 None:intergenic
CTGTTTCTTGGTGGGTACTT+TGG 0.387096 tig0019615:+84195 Msa1374930:CDS
TTCACCGTTTATAGTCTTGA+AGG 0.388017 tig0019615:+86678 Msa1374930:CDS
CAGCAAGGATTCGCCGTCAA+TGG 0.388996 tig0019615:+83469 Msa1374930:CDS
CTGAGAAGCATAAGATTTGA+AGG 0.394553 tig0019615:-82952 None:intergenic
GATCCACCGTCGCAACTAAT+CGG 0.395068 tig0019615:+83227 Msa1374930:CDS
AAATCTGATGATAATGGGAT+TGG 0.402802 tig0019615:+84544 Msa1374930:CDS
ATCGGGTGGGTCCATTAATC+TGG 0.405460 tig0019615:-83663 None:intergenic
TGGTAGATTGGTTTCTGATT+GGG 0.406121 tig0019615:+83970 Msa1374930:CDS
TGTTGGCGGTCGTGGAGAAT+AGG 0.409760 tig0019615:-83026 None:intergenic
GGCTGCTGTGTTGGCGGTCG+TGG 0.411125 tig0019615:-83034 None:intergenic
ATAAATCAAAGAGTTTCTAT+TGG 0.418489 tig0019615:+87090 Msa1374930:three_prime_UTR
CATCTATCTCCCACATCAAA+TGG 0.420933 tig0019615:-86201 None:intergenic
GTGGTAGATTGGTTTCTGAT+TGG 0.422054 tig0019615:+83969 Msa1374930:CDS
TTGAAGGAGCGTCTGATTCT+GGG 0.423129 tig0019615:+85431 Msa1374930:CDS
GATCCTCTAGCTTAGCTTTG+TGG 0.429132 tig0019615:-83208 None:intergenic
TTTGAGTGTTCCTTTGTTGA+GGG 0.432061 tig0019615:+83886 Msa1374930:CDS
ACATGGGAGAAAGATATATC+AGG 0.439374 tig0019615:+86764 Msa1374930:CDS
AATGGACCCACCCGATGAAC+CGG 0.440292 tig0019615:+83670 Msa1374930:CDS
TAGGAAAGGCACTAGCTCTT+AGG 0.441340 tig0019615:-84435 None:intergenic
ACTCTCGGGGCCGCCTTTGG+TGG 0.444265 tig0019615:+84327 Msa1374930:CDS
TTGCTGTGTCTTCTCCGAAC+AGG 0.449131 tig0019615:-83452 None:intergenic
TGTGAGCTCACAACTTGTCT+TGG 0.453149 tig0019615:+86110 Msa1374930:CDS
TGATCCTTCAAGACTATAAA+CGG 0.453207 tig0019615:-86682 None:intergenic
TAACAGTGTCCTTGCTACTA+AGG 0.454493 tig0019615:+86414 Msa1374930:CDS
GATTAGCTTGATATCTACTA+AGG 0.455955 tig0019615:+87053 Msa1374930:three_prime_UTR
TAGTTTGCATCACAGGGTTA+GGG 0.456148 tig0019615:-82920 None:intergenic
GTTGGCGGTCGTGGAGAATA+GGG 0.456545 tig0019615:-83025 None:intergenic
TGTCCAGGTTAATGCCTTCA+GGG 0.458204 tig0019615:+85942 Msa1374930:intron
ACATGGTTAAAGTGGCAATC+TGG 0.459492 tig0019615:+86716 Msa1374930:CDS
GGAATTTCCTATTGAGAAAG+AGG 0.459561 tig0019615:+84023 Msa1374930:CDS
TCACAGGGTTAGGGTCTCTC+TGG 0.464016 tig0019615:-82911 None:intergenic
AGCAAGGATTCGCCGTCAAT+GGG 0.468587 tig0019615:+83470 Msa1374930:CDS
AGATCTTCTATCCGGTTCAT+CGG 0.470858 tig0019615:-83681 None:intergenic
CTTTGAGTGTTCCTTTGTTG+AGG 0.472992 tig0019615:+83885 Msa1374930:CDS
AAAACCATAAATCTATTTGA+AGG 0.473072 tig0019615:+85415 Msa1374930:CDS
AAGCTGTGCAAAATTGTGTT+TGG 0.475551 tig0019615:+84074 Msa1374930:CDS
TTCTATCCGGTTCATCGGGT+GGG 0.475815 tig0019615:-83676 None:intergenic
CTTCATAAACAGCGTGCCTC+CGG 0.476167 tig0019615:+83257 Msa1374930:CDS
CGAGTTGAAAGTTAGTTTCG+AGG 0.476779 tig0019615:+83388 Msa1374930:CDS
TATATCTTTCTCCCATGTCT+TGG 0.481099 tig0019615:-86759 None:intergenic
TCTCCATCACCTGCGGGTAA+TGG 0.484223 tig0019615:+83539 Msa1374930:CDS
TTTCAGGTGGGGTAGCTACA+TGG 0.484332 tig0019615:-86492 None:intergenic
ATTATCGTATCTCAGAAATA+CGG 0.486565 tig0019615:-86374 None:intergenic
TCAATAGAATCTCCCATGTC+AGG 0.487717 tig0019615:-86460 None:intergenic
CGGAAAGTTAACGCCGGTGG+AGG 0.491627 tig0019615:+83343 Msa1374930:CDS
TAATGAATATGGTTCGGCAT+GGG 0.492101 tig0019615:+84647 Msa1374930:CDS
TCAGTAAGGTGTTGGATAAG+AGG 0.493049 tig0019615:-87163 None:intergenic
TCATCAGATTTCTTGGAAAG+TGG 0.493438 tig0019615:-84532 None:intergenic
CGTCAATGGGTGAGTATGCT+CGG 0.493782 tig0019615:+83483 Msa1374930:CDS
ATCCCATTCGAATTTGAAGC+TGG 0.495504 tig0019615:-83413 None:intergenic
AATGGGATTGGGAATGGTGG+TGG 0.496908 tig0019615:+84556 Msa1374930:CDS
GAAAAGAGCGGCTGCTGTGT+TGG 0.498772 tig0019615:-83043 None:intergenic
CTGATCGTCTTCCAGCTAGT+TGG 0.498824 tig0019615:+86890 Msa1374930:CDS
TCGAAAGGCGGAAGAGGAAG+AGG 0.498977 tig0019615:+84354 Msa1374930:CDS
AGAGGAAAGGCTTGCTGATG+AGG 0.500044 tig0019615:+84372 Msa1374930:CDS
GGAGAATAGGGAGCTGTTCG+TGG 0.500526 tig0019615:-83013 None:intergenic
GATGAACCGGATAGAAGATC+TGG 0.501788 tig0019615:+83683 Msa1374930:CDS
GATCTTCTATCCGGTTCATC+GGG 0.503203 tig0019615:-83680 None:intergenic
TGGAAGTTCATTCTATGAGT+TGG 0.503678 tig0019615:-86739 None:intergenic
GGAGATTCGAAAGGCGGAAG+AGG 0.504692 tig0019615:+84348 Msa1374930:CDS
CGGTGATATGTCATTGGACA+TGG 0.505087 tig0019615:+83277 Msa1374930:CDS
AATCTGATGATAATGGGATT+GGG 0.505675 tig0019615:+84545 Msa1374930:CDS
CCTCCAATGCTTCGTTTGAG+AGG 0.506341 tig0019615:+83591 Msa1374930:CDS
GCACTAGCTCTTAGGTCAGC+AGG 0.507575 tig0019615:-84427 None:intergenic
ATCCAAATAACGTGTCGGCT+TGG 0.507985 tig0019615:+84611 Msa1374930:CDS
AACCAGCTTCAAATTCGAAT+GGG 0.508508 tig0019615:+83411 Msa1374930:CDS
AAGCTGTGAACGATCCTGTT+CGG 0.508743 tig0019615:+83438 Msa1374930:CDS
CCTCTCAAACGAAGCATTGG+AGG 0.508854 tig0019615:-83591 None:intergenic
TCAATTGAACATGGTTAAAG+TGG 0.509960 tig0019615:+86708 Msa1374930:CDS
AGGTTAATGCCTTCAGGGAG+AGG 0.510601 tig0019615:+85947 Msa1374930:intron
GTTTGTGATCGAAACACTCT+CGG 0.513851 tig0019615:+84312 Msa1374930:CDS
TGCCTCCGGTGATATGTCAT+TGG 0.514202 tig0019615:+83271 Msa1374930:CDS
GTGATTGTTGTCCAACTAGC+TGG 0.516994 tig0019615:-86901 None:intergenic
CTTCTATCCGGTTCATCGGG+TGG 0.521257 tig0019615:-83677 None:intergenic
GATGATAATGGGATTGGGAA+TGG 0.521877 tig0019615:+84550 Msa1374930:CDS
TAGTAGCAAGGACACTGTTA+GGG 0.522100 tig0019615:-86411 None:intergenic
GTCGCGACTCAGTAAGGTGT+TGG 0.526777 tig0019615:-87171 None:intergenic
ATAAAACGCATTAAGTCCTC+AGG 0.526910 tig0019615:-85373 None:intergenic
AAGAGCGGCTGCTGTGTTGG+CGG 0.527336 tig0019615:-83040 None:intergenic
AAAAGAACAGAAAAGAAAGT+AGG 0.528103 tig0019615:-82824 None:intergenic
GTTCCTCTCAAACGAAGCAT+TGG 0.529720 tig0019615:-83594 None:intergenic
AGAGGTTAATGAATATGGTT+CGG 0.532380 tig0019615:+84641 Msa1374930:CDS
ATGATGACAATGGTTGATGA+AGG 0.532525 tig0019615:-82636 None:intergenic
GCATGGGGCACTTACTACAT+TGG 0.533191 tig0019615:+84663 Msa1374930:CDS
TAGAGAGTCGCGACTCAGTA+AGG 0.535279 tig0019615:-87177 None:intergenic
ACCCGACCAGATCTTCTATC+CGG 0.536055 tig0019615:-83689 None:intergenic
AAAAGAAAGTAGGTATTTGG+TGG 0.536846 tig0019615:-82814 None:intergenic
GTTCAGAAGTTGCAGAATGC+CGG 0.537436 tig0019615:+84394 Msa1374930:CDS
TTTCCGATTAGTTGCGACGG+TGG 0.542126 tig0019615:-83230 None:intergenic
ATGGAGGAGCTTCAGAATGA+AGG 0.543397 tig0019615:+83308 Msa1374930:CDS
CCACCATTACCCGCAGGTGA+TGG 0.544082 tig0019615:-83542 None:intergenic
ATCTTGTTATTGGCTTGGGA+AGG 0.545695 tig0019615:-83113 None:intergenic
AACTTGCCACTCTTAACCAC+AGG 0.546689 tig0019615:-84502 None:intergenic
ACCGGATAGAAGATCTGGTC+GGG 0.546747 tig0019615:+83688 Msa1374930:CDS
GTCTTTCTAGGACGATGTGA+GGG 0.547082 tig0019615:-82718 None:intergenic
ATGATTCTTGTTCTAATATG+TGG 0.547822 tig0019615:+83950 Msa1374930:CDS
CCATCACCTGCGGGTAATGG+TGG 0.548000 tig0019615:+83542 Msa1374930:CDS
GGACATGGATTTGGAGATGG+AGG 0.548013 tig0019615:+83292 Msa1374930:CDS
ACGACGACGTCTCCGGCCAT+AGG 0.549204 tig0019615:-83065 None:intergenic
ACTACGGTAGAAATTATGTA+TGG 0.549810 tig0019615:-86437 None:intergenic
CGTCATTCTCCATCACCTGC+GGG 0.550193 tig0019615:+83533 Msa1374930:CDS
ACAAATCAGAAGTGAAAATG+AGG 0.550446 tig0019615:+84729 Msa1374930:CDS
ACATCAAGAGTGGAAGGTTG+AGG 0.551793 tig0019615:+84458 Msa1374930:CDS
ATGTTGCTAGGCGTGGCTGC+AGG 0.553503 tig0019615:+84782 Msa1374930:CDS
AACTCGCGTTGAATCACCGT+GGG 0.553700 tig0019615:-83371 None:intergenic
TTTGTGATCGAAACACTCTC+GGG 0.554279 tig0019615:+84313 Msa1374930:CDS
GCCTTTCGAATCTCCACCAA+AGG 0.555304 tig0019615:-84340 None:intergenic
ACCTTTCCTCCCAATCATCC+CGG 0.555661 tig0019615:-83735 None:intergenic
ATGACGACGGTCGTGATTAG+GGG 0.560581 tig0019615:-83516 None:intergenic
AATGAAGGTAACGTCGCTGA+CGG 0.565304 tig0019615:+83323 Msa1374930:CDS
GAACCAGCTTCAAATTCGAA+TGG 0.566244 tig0019615:+83410 Msa1374930:CDS
CAGTTTCATTGATAACAAGA+AGG 0.567068 tig0019615:+86642 Msa1374930:intron
ACCGTGGGAGATTCCTCCAC+CGG 0.568309 tig0019615:-83356 None:intergenic
CAAATCCGCGTTGAAGAACT+GGG 0.568926 tig0019615:+85462 Msa1374930:CDS
TTCCTAACATCAAGAGTGGA+AGG 0.569646 tig0019615:+84452 Msa1374930:CDS
AAATCTTTCAGAATGTTGCT+AGG 0.569989 tig0019615:+84770 Msa1374930:CDS
GGATTGGGAATGGTGGTGGT+GGG 0.572317 tig0019615:+84560 Msa1374930:CDS
TCCGGGATGATTGGGAGGAA+AGG 0.573527 tig0019615:+83734 Msa1374930:CDS
TTGATAACAAGAAGGAGCAC+TGG 0.574489 tig0019615:+86650 Msa1374930:CDS
TAGAATGAACTTCCAAGACA+TGG 0.577011 tig0019615:+86747 Msa1374930:CDS
TCACCTGCGGGTAATGGTGG+TGG 0.577751 tig0019615:+83545 Msa1374930:CDS
ATTGGACATGGATTTGGAGA+TGG 0.578623 tig0019615:+83289 Msa1374930:CDS
AATGAATATGGTTCGGCATG+GGG 0.578953 tig0019615:+84648 Msa1374930:CDS
GCCTTTCCTAACATCAAGAG+TGG 0.581351 tig0019615:+84448 Msa1374930:CDS
TATGTATGGCCTTAGTAGCA+AGG 0.582004 tig0019615:-86423 None:intergenic
GCCTTTGGTGGAGATTCGAA+AGG 0.585486 tig0019615:+84339 Msa1374930:CDS
TTCAAGACTATAAACGGTGA+AGG 0.586497 tig0019615:-86676 None:intergenic
TTTCAGAATGTTGCTAGGCG+TGG 0.591115 tig0019615:+84775 Msa1374930:CDS
TCCACTCTTGATGTTAGGAA+AGG 0.591698 tig0019615:-84449 None:intergenic
AATAGGGAGCTGTTCGTGGT+CGG 0.592308 tig0019615:-83009 None:intergenic
ATGTGAAATTGATGCGACCC+AGG 0.595144 tig0019615:+86221 Msa1374930:CDS
CAAGAAACAGACCAAAACCT+TGG 0.596695 tig0019615:-84182 None:intergenic
TCTTGGTGGGTACTTTGGTG+TGG 0.598050 tig0019615:+84200 Msa1374930:CDS
TGACGACGGTCGTGATTAGG+GGG 0.598378 tig0019615:-83515 None:intergenic
AAACCTTGGTCACATATTGA+AGG 0.599670 tig0019615:-84168 None:intergenic
TGTAATGCATCCATTTGATG+TGG 0.600406 tig0019615:+86191 Msa1374930:CDS
TTTCTACCGTAGTCCTGACA+TGG 0.601376 tig0019615:+86447 Msa1374930:CDS
GATGACAATGGTTGATGAAG+GGG 0.603016 tig0019615:-82634 None:intergenic
GATAATGGGATTGGGAATGG+TGG 0.603168 tig0019615:+84553 Msa1374930:CDS
TTTCGAATCTCCACCAAAGG+CGG 0.604367 tig0019615:-84337 None:intergenic
GGTCTTTCTAGGACGATGTG+AGG 0.605622 tig0019615:-82719 None:intergenic
ACATGAGGCTACTAAGTACA+TGG 0.605980 tig0019615:-86949 None:intergenic
GAATTTCCTATTGAGAAAGA+GGG 0.608181 tig0019615:+84024 Msa1374930:CDS
TAATGGTGGTGGTGATTGCG+AGG 0.608218 tig0019615:+83556 Msa1374930:CDS
TTAATGAATATGGTTCGGCA+TGG 0.609094 tig0019615:+84646 Msa1374930:CDS
TCCTAAAGTTTAGTTAAACG+TGG 0.609566 tig0019615:-82847 None:intergenic
AAAAGCCCTGTGGTTAAGAG+TGG 0.609737 tig0019615:+84496 Msa1374930:CDS
AATCTCCCATGTCAGGACTA+CGG 0.611921 tig0019615:-86453 None:intergenic
AAGCGCTCTCCTCTCCCTGA+AGG 0.613289 tig0019615:-85956 None:intergenic
CGAGCATACTCACCCATTGA+CGG 0.614333 tig0019615:-83482 None:intergenic
TGATGACAATGGTTGATGAA+GGG 0.616365 tig0019615:-82635 None:intergenic
AGCTGGAAGACGATCAGAAG+TGG 0.616809 tig0019615:-86884 None:intergenic
CTCATCACGAACATTGTCGC+CGG 0.617480 tig0019615:-83171 None:intergenic
CATGTCCAATGACATATCAC+CGG 0.618141 tig0019615:-83276 None:intergenic
AGGCGGAAGAGGAAGAGGAA+AGG 0.622102 tig0019615:+84359 Msa1374930:CDS
TCGTCATTCTCCATCACCTG+CGG 0.624845 tig0019615:+83532 Msa1374930:CDS
GGAAGACGATCAGAAGTGGT+AGG 0.626699 tig0019615:-86880 None:intergenic
CCTCTAGCTTAGCTTTGTGG+CGG 0.631480 tig0019615:-83205 None:intergenic
GTAATGCATCCATTTGATGT+GGG 0.631740 tig0019615:+86192 Msa1374930:CDS
TGTCGGCTTGGAATATGAAG+AGG 0.635410 tig0019615:+84623 Msa1374930:CDS
GTGGTTGTTGAAAACTCTAG+TGG 0.639430 tig0019615:+84219 Msa1374930:CDS
CAATCACAAATTGAGTAGAA+GGG 0.641112 tig0019615:+86917 Msa1374930:exon
TTGCAGAGAGAGAGTTGTGG+TGG 0.641201 tig0019615:-82580 None:intergenic
GCTCTAACATTAATGTCGAG+AGG 0.642384 tig0019615:-86853 None:intergenic
AGAATGAACTTCCAAGACAT+GGG 0.642846 tig0019615:+86748 Msa1374930:CDS
GTCAGCAGGTATGCTAACAC+CGG 0.644403 tig0019615:-84413 None:intergenic
CTTAGTAGCCTCATGTTGCG+TGG 0.644679 tig0019615:+86956 Msa1374930:three_prime_UTR
ACATAATGCCACGCAACATG+AGG 0.644692 tig0019615:-86964 None:intergenic
AACCGGATAGAAGATCTGGT+CGG 0.644852 tig0019615:+83687 Msa1374930:CDS
TTTGGTGGAGATTCGAAAGG+CGG 0.649479 tig0019615:+84342 Msa1374930:CDS
AAGAGTGGAAGGTTGAGGAG+TGG 0.649657 tig0019615:+84463 Msa1374930:CDS
CCTGCTAAAATGTAACACTT+CGG 0.652616 tig0019615:-86990 None:intergenic
TGTCCTTCAATATGTGACCA+AGG 0.652704 tig0019615:+84165 Msa1374930:CDS
GCCGGTGGAGGAATCTCCCA+CGG 0.653244 tig0019615:+83355 Msa1374930:CDS
TGACGGAAAGTTAACGCCGG+TGG 0.654507 tig0019615:+83340 Msa1374930:CDS
TGTTCGGAGAAGACACAGCA+AGG 0.654791 tig0019615:+83454 Msa1374930:CDS
TCACCACCACCATTACCCGC+AGG 0.654875 tig0019615:-83548 None:intergenic
CCGCCACAAAGCTAAGCTAG+AGG 0.656696 tig0019615:+83205 Msa1374930:CDS
GTGAAAATCAACGACGACGG+CGG 0.662140 tig0019615:+83086 Msa1374930:CDS
GCTGAATCCAAATAACGTGT+CGG 0.662469 tig0019615:+84606 Msa1374930:CDS
TTCTACCGTAGTCCTGACAT+GGG 0.663692 tig0019615:+86448 Msa1374930:CDS
GGATCACGATCAATTGAACA+TGG 0.664955 tig0019615:+86699 Msa1374930:CDS
CTGCAGGTTTATATATCCTG+AGG 0.668623 tig0019615:+85357 Msa1374930:intron
TAATGTCGAGAGGCATGAGA+CGG 0.670724 tig0019615:-86843 None:intergenic
TCTTTCTAGGACGATGTGAG+GGG 0.678504 tig0019615:-82717 None:intergenic
ATCGTATCTCAGAAATACGG+TGG 0.688391 tig0019615:-86371 None:intergenic
GTCCAATGACATATCACCGG+AGG 0.689612 tig0019615:-83273 None:intergenic
TCGATGAAGTTTGTTCACTG+CGG 0.690334 tig0019615:-86004 None:intergenic
TGGGAGAAAGATATATCAGG+AGG 0.691880 tig0019615:+86767 Msa1374930:CDS
CGCTGACGGAAAGTTAACGC+CGG 0.693881 tig0019615:+83337 Msa1374930:CDS
ACTTGCCACTCTTAACCACA+GGG 0.694699 tig0019615:-84501 None:intergenic
GGATTGCAGAGAGAGAGTTG+TGG 0.697383 tig0019615:-82583 None:intergenic
CTCCGGCCATAGGAAAAGAG+CGG 0.698377 tig0019615:-83055 None:intergenic
TTGTGATCGAAACACTCTCG+GGG 0.699008 tig0019615:+84314 Msa1374930:CDS
AACGATAATGATGATGACAA+TGG 0.699365 tig0019615:-82646 None:intergenic
AGAGTCTTATCCCTCAACAA+AGG 0.699553 tig0019615:-83896 None:intergenic
TGTTGAGGGATAAGACTCTG+TGG 0.700670 tig0019615:+83900 Msa1374930:CDS
GTCGTGAAAATCAACGACGA+CGG 0.711455 tig0019615:+83083 Msa1374930:CDS
CAACTCGCGTTGAATCACCG+TGG 0.722386 tig0019615:-83372 None:intergenic
TGAGGCTACTAAGTACATGG+TGG 0.727802 tig0019615:-86946 None:intergenic
CAGGTGATGGAGAATGACGA+CGG 0.731799 tig0019615:-83529 None:intergenic
ATCCGCGTTGAAGAACTGGG+TGG 0.755991 tig0019615:+85465 Msa1374930:CDS
TACCACCCAGTTCTTCAACG+CGG 0.758211 tig0019615:-85467 None:intergenic
AATGCTTCAGAAAAGCCCTG+TGG 0.795880 tig0019615:+84486 Msa1374930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTAATATATATACTA+CGG - tig0019615:85670-85689 None:intergenic 10.0%
!!! TTGATTTTTTAGAATTGAAA+GGG - tig0019615:82743-82762 None:intergenic 15.0%
!!! TTTGATTTTTTAGAATTGAA+AGG - tig0019615:82744-82763 None:intergenic 15.0%
!!! TTGAGTTTGATTTTAATTAT+TGG + tig0019615:83848-83867 Msa1374930:CDS 15.0%
!! GTGTATATAGAAAAATTTCT+TGG + tig0019615:82788-82807 Msa1374930:five_prime_UTR 20.0%
!! TATGTCATATAAATCATGAT+TGG - tig0019615:84833-84852 None:intergenic 20.0%
!! AAAACTCAAAAGACATAATT+AGG + tig0019615:84987-85006 Msa1374930:intron 20.0%
!! AAAAATAAACCAAATAGAAG+GGG - tig0019615:85020-85039 None:intergenic 20.0%
!! GAAAAATAAACCAAATAGAA+GGG - tig0019615:85021-85040 None:intergenic 20.0%
!! TGAAAAATAAACCAAATAGA+AGG - tig0019615:85022-85041 None:intergenic 20.0%
!! AAAACCATAAATCTATTTGA+AGG + tig0019615:85415-85434 Msa1374930:CDS 20.0%
!! CAAATATGCAAAGATAATAA+AGG - tig0019615:86577-86596 None:intergenic 20.0%
!! TATTATCTTTGCATATTTGT+TGG + tig0019615:86578-86597 Msa1374930:intron 20.0%
!! TTTATGTAAAGAGTTTCTTA+TGG + tig0019615:87019-87038 Msa1374930:three_prime_UTR 20.0%
!! ATAAATCAAAGAGTTTCTAT+TGG + tig0019615:87090-87109 Msa1374930:three_prime_UTR 20.0%
! AAAAGAACAGAAAAGAAAGT+AGG - tig0019615:82827-82846 None:intergenic 25.0%
!!! TTTTAATAGTTTGCATCACA+GGG - tig0019615:82929-82948 None:intergenic 25.0%
!!! TTTTTAATAGTTTGCATCAC+AGG - tig0019615:82930-82949 None:intergenic 25.0%
! TAAAACTAAGTCCAGATTAA+TGG + tig0019615:83652-83671 Msa1374930:CDS 25.0%
! ATGATTCTTGTTCTAATATG+TGG + tig0019615:83950-83969 Msa1374930:CDS 25.0%
! TATGAAGAGGTTAATGAATA+TGG + tig0019615:84636-84655 Msa1374930:CDS 25.0%
!! ACAAATGCATAAAAGTATAC+AGG - tig0019615:84883-84902 None:intergenic 25.0%
! TAATACCAAGAGAAAGAAAT+AGG - tig0019615:84953-84972 None:intergenic 25.0%
! TACATGTAATAAATGACAAG+TGG + tig0019615:85278-85297 Msa1374930:intron 25.0%
! AAATAAAATGACAGAGAGAA+AGG - tig0019615:85320-85339 None:intergenic 25.0%
! AGGAAACATATGAAATTACA+CGG - tig0019615:85518-85537 None:intergenic 25.0%
! AAACAACACTAAAGAAGAAA+AGG - tig0019615:85538-85557 None:intergenic 25.0%
!! TATCAAATTTTGCCTCTAAA+AGG - tig0019615:85574-85593 None:intergenic 25.0%
! ATCTAATATATATACTACGG+CGG - tig0019615:85667-85686 None:intergenic 25.0%
! AAACAAAATCAAAAGTAACC+AGG - tig0019615:85850-85869 None:intergenic 25.0%
! ATTATCGTATCTCAGAAATA+CGG - tig0019615:86377-86396 None:intergenic 25.0%
!! TTGTAGTCAATAACGATTTT+AGG - tig0019615:86620-86639 None:intergenic 25.0%
! AACGATAATGATGATGACAA+TGG - tig0019615:82649-82668 None:intergenic 30.0%
AAAAGAAAGTAGGTATTTGG+TGG - tig0019615:82817-82836 None:intergenic 30.0%
CAGAAAAGAAAGTAGGTATT+TGG - tig0019615:82820-82839 None:intergenic 30.0%
TCCACGTTTAACTAAACTTT+AGG + tig0019615:82846-82865 Msa1374930:five_prime_UTR 30.0%
TCCTAAAGTTTAGTTAAACG+TGG - tig0019615:82850-82869 None:intergenic 30.0%
! TTCTCTCCAAATCTTGTTAT+TGG - tig0019615:83126-83145 None:intergenic 30.0%
! TGATGAAGATGATCCTTTTA+TGG + tig0019615:83763-83782 Msa1374930:CDS 30.0%
! TGTGTTTTCTTATACTCATC+TGG - tig0019615:83800-83819 None:intergenic 30.0%
AGAAAACACATTTCAGTCTT+TGG + tig0019615:83810-83829 Msa1374930:CDS 30.0%
TGTTCTAATATGTGGTAGAT+TGG + tig0019615:83958-83977 Msa1374930:CDS 30.0%
! TTGCTGTGTTTTGTATTGAA+AGG + tig0019615:84002-84021 Msa1374930:CDS 30.0%
GAATTTCCTATTGAGAAAGA+GGG + tig0019615:84024-84043 Msa1374930:CDS 30.0%
!!! AGGGTTCTTTATTTTGTGTA+TGG + tig0019615:84043-84062 Msa1374930:CDS 30.0%
!!! TTTATTTTGTGTATGGTGTC+AGG + tig0019615:84050-84069 Msa1374930:CDS 30.0%
TGCAAAATTGTGTTTGGTTA+GGG + tig0019615:84080-84099 Msa1374930:CDS 30.0%
ATGTGAGTACATACTTTGAT+AGG + tig0019615:84266-84285 Msa1374930:CDS 30.0%
TCCAAGAAATCTGATGATAA+TGG + tig0019615:84538-84557 Msa1374930:CDS 30.0%
CCAAGAAATCTGATGATAAT+GGG + tig0019615:84539-84558 Msa1374930:CDS 30.0%
!! AAATCTGATGATAATGGGAT+TGG + tig0019615:84544-84563 Msa1374930:CDS 30.0%
!! AATCTGATGATAATGGGATT+GGG + tig0019615:84545-84564 Msa1374930:CDS 30.0%
AGAGGTTAATGAATATGGTT+CGG + tig0019615:84641-84660 Msa1374930:CDS 30.0%
!! ATTTTCACTTCTGATTTGTG+TGG - tig0019615:84728-84747 None:intergenic 30.0%
ACAAATCAGAAGTGAAAATG+AGG + tig0019615:84729-84748 Msa1374930:CDS 30.0%
AAATCTTTCAGAATGTTGCT+AGG + tig0019615:84770-84789 Msa1374930:CDS 30.0%
GGTGAGTAAAACTAGATTAA+TGG - tig0019615:84812-84831 None:intergenic 30.0%
! TAACTCCTATTTCTTTCTCT+TGG + tig0019615:84945-84964 Msa1374930:intron 30.0%
CTTTCTCTTGGTATTATGTA+TGG + tig0019615:84957-84976 Msa1374930:intron 30.0%
CTCAATTGATTATGTCACAT+AGG - tig0019615:85208-85227 None:intergenic 30.0%
TAGTGTGACCAATAAAGAAA+AGG + tig0019615:85232-85251 Msa1374930:intron 30.0%
! GACAGAAACCTTTTCTTTAT+TGG - tig0019615:85243-85262 None:intergenic 30.0%
! TGTGCATCACATTTTCATTA+TGG + tig0019615:85606-85625 Msa1374930:intron 30.0%
TACAACAAGTGAATAATGTC+AGG - tig0019615:85635-85654 None:intergenic 30.0%
TCTAATATATATACTACGGC+GGG - tig0019615:85666-85685 None:intergenic 30.0%
TAGTTGCATCTGATTAAACT+TGG + tig0019615:85729-85748 Msa1374930:intron 30.0%
! TATTGCTCATTTTATTGTCC+AGG + tig0019615:85927-85946 Msa1374930:intron 30.0%
CCAAATAACCAGTATGATAA+TGG - tig0019615:86049-86068 None:intergenic 30.0%
! CCATTATCATACTGGTTATT+TGG + tig0019615:86046-86065 Msa1374930:CDS 30.0%
GCTCACAAAAAGAAGAAATT+TGG - tig0019615:86097-86116 None:intergenic 30.0%
GTCTTGGTTGCATTTATATT+CGG + tig0019615:86126-86145 Msa1374930:CDS 30.0%
TAGAGATATAGACATTACCT+GGG - tig0019615:86241-86260 None:intergenic 30.0%
ACTACGGTAGAAATTATGTA+TGG - tig0019615:86440-86459 None:intergenic 30.0%
! TTCATGAGTGAAATCTTTTC+AGG - tig0019615:86511-86530 None:intergenic 30.0%
! CAGTTTCATTGATAACAAGA+AGG + tig0019615:86642-86661 Msa1374930:intron 30.0%
TGATCCTTCAAGACTATAAA+CGG - tig0019615:86685-86704 None:intergenic 30.0%
TCAATTGAACATGGTTAAAG+TGG + tig0019615:86708-86727 Msa1374930:CDS 30.0%
!!! AAGAGTTGATGAAGATTTTC+AGG + tig0019615:86803-86822 Msa1374930:CDS 30.0%
!!! AGAGTTGATGAAGATTTTCA+GGG + tig0019615:86804-86823 Msa1374930:CDS 30.0%
ACAATCACAAATTGAGTAGA+AGG + tig0019615:86916-86935 Msa1374930:exon 30.0%
CAATCACAAATTGAGTAGAA+GGG + tig0019615:86917-86936 Msa1374930:exon 30.0%
!! GATTAGCTTGATATCTACTA+AGG + tig0019615:87053-87072 Msa1374930:three_prime_UTR 30.0%
!! TGATGACAATGGTTGATGAA+GGG - tig0019615:82638-82657 None:intergenic 35.0%
!! ATGATGACAATGGTTGATGA+AGG - tig0019615:82639-82658 None:intergenic 35.0%
AGAATTGAAAGGGTCTTTCT+AGG - tig0019615:82733-82752 None:intergenic 35.0%
! CTGAGAAGCATAAGATTTGA+AGG - tig0019615:82955-82974 None:intergenic 35.0%
!! CCAAATCTTGTTATTGGCTT+GGG - tig0019615:83120-83139 None:intergenic 35.0%
!! TCCAAATCTTGTTATTGGCT+TGG - tig0019615:83121-83140 None:intergenic 35.0%
!!! TACGATTTTTGGAATGACAC+CGG + tig0019615:83152-83171 Msa1374930:CDS 35.0%
!! AATTTTCCGATTAGTTGCGA+CGG - tig0019615:83236-83255 None:intergenic 35.0%
TATGTCATTGGACATGGATT+TGG + tig0019615:83283-83302 Msa1374930:CDS 35.0%
AACCAGCTTCAAATTCGAAT+GGG + tig0019615:83411-83430 Msa1374930:CDS 35.0%
! TTGATTTTCTCTGCATTGAG+AGG - tig0019615:83619-83638 None:intergenic 35.0%
! AGATGATCCTTTTATGGAAG+AGG + tig0019615:83769-83788 Msa1374930:CDS 35.0%
GGAAAATCCTCTTCCATAAA+AGG - tig0019615:83779-83798 None:intergenic 35.0%
GTCTTTGGATTCTTCTTGAA+TGG + tig0019615:83825-83844 Msa1374930:CDS 35.0%
TTTGAGTGTTCCTTTGTTGA+GGG + tig0019615:83886-83905 Msa1374930:CDS 35.0%
!!! GCAGCTTAAGTTTTGGAAAT+GGG + tig0019615:83922-83941 Msa1374930:CDS 35.0%
!! TGGTAGATTGGTTTCTGATT+GGG + tig0019615:83970-83989 Msa1374930:CDS 35.0%
TGGTTTCTGATTGGGTTATT+AGG + tig0019615:83978-83997 Msa1374930:CDS 35.0%
GGAATTTCCTATTGAGAAAG+AGG + tig0019615:84023-84042 Msa1374930:CDS 35.0%
AAAGAACCCTCTTTCTCAAT+AGG - tig0019615:84033-84052 None:intergenic 35.0%
AAGCTGTGCAAAATTGTGTT+TGG + tig0019615:84074-84093 Msa1374930:CDS 35.0%
GTGCAAAATTGTGTTTGGTT+AGG + tig0019615:84079-84098 Msa1374930:CDS 35.0%
AAACCTTGGTCACATATTGA+AGG - tig0019615:84171-84190 None:intergenic 35.0%
! TCAATATGTGACCAAGGTTT+TGG + tig0019615:84171-84190 Msa1374930:CDS 35.0%
GTTGAAAACTCTAGTGGTTA+AGG + tig0019615:84225-84244 Msa1374930:CDS 35.0%
TCATCAGATTTCTTGGAAAG+TGG - tig0019615:84535-84554 None:intergenic 35.0%
CCCATTATCATCAGATTTCT+TGG - tig0019615:84542-84561 None:intergenic 35.0%
! TTAATGAATATGGTTCGGCA+TGG + tig0019615:84646-84665 Msa1374930:CDS 35.0%
! TAATGAATATGGTTCGGCAT+GGG + tig0019615:84647-84666 Msa1374930:CDS 35.0%
! CATAAAAGTATACAGGTGTC+AGG - tig0019615:84876-84895 None:intergenic 35.0%
AAACATGACCAAATCACCTT+AGG + tig0019615:85078-85097 Msa1374930:intron 35.0%
AAAACTTGCCTAAGGTGATT+TGG - tig0019615:85089-85108 None:intergenic 35.0%
!! TCACCTTAGGCAAGTTTTAA+TGG + tig0019615:85091-85110 Msa1374930:intron 35.0%
ACACCATTAAAACTTGCCTA+AGG - tig0019615:85097-85116 None:intergenic 35.0%
AGTAGTAGTAGTAGTAGTCT+TGG + tig0019615:85133-85152 Msa1374930:intron 35.0%
GAGAAAGGACTGATAAACAA+TGG - tig0019615:85305-85324 None:intergenic 35.0%
ATAAAACGCATTAAGTCCTC+AGG - tig0019615:85376-85395 None:intergenic 35.0%
CGCTCCTTCAAATAGATTTA+TGG - tig0019615:85422-85441 None:intergenic 35.0%
!! CTTTAGTGTTGTTTGTCTGA+TGG + tig0019615:85544-85563 Msa1374930:intron 35.0%
! TCTGATGGAATACCTTTTAG+AGG + tig0019615:85559-85578 Msa1374930:intron 35.0%
TGAAAATGTGATGCACATCA+AGG - tig0019615:85603-85622 None:intergenic 35.0%
AACAGAGCTTAGGTAACTAT+GGG - tig0019615:85693-85712 None:intergenic 35.0%
AAACAGAGCTTAGGTAACTA+TGG - tig0019615:85694-85713 None:intergenic 35.0%
!! AATCAGATGCAACTAGTCTT+AGG - tig0019615:85724-85743 None:intergenic 35.0%
CTTAGTTGCCATTATCATAC+TGG + tig0019615:86038-86057 Msa1374930:CDS 35.0%
!! GGTTATTTGGCTCTTGATAT+TGG + tig0019615:86059-86078 Msa1374930:CDS 35.0%
TGTAATGCATCCATTTGATG+TGG + tig0019615:86191-86210 Msa1374930:CDS 35.0%
GTAATGCATCCATTTGATGT+GGG + tig0019615:86192-86211 Msa1374930:CDS 35.0%
CTAGAGATATAGACATTACC+TGG - tig0019615:86242-86261 None:intergenic 35.0%
CAGGTAATGTCTATATCTCT+AGG + tig0019615:86240-86259 Msa1374930:intron 35.0%
AAACCACAAGCAAAAATGAG+GGG - tig0019615:86320-86339 None:intergenic 35.0%
GAAACCACAAGCAAAAATGA+GGG - tig0019615:86321-86340 None:intergenic 35.0%
TGAAACCACAAGCAAAAATG+AGG - tig0019615:86322-86341 None:intergenic 35.0%
! TTTTTGCTTGTGGTTTCAGA+TGG + tig0019615:86324-86343 Msa1374930:intron 35.0%
!!! TGAGTGAAATCTTTTCAGGT+GGG - tig0019615:86507-86526 None:intergenic 35.0%
!! ATGAGTGAAATCTTTTCAGG+TGG - tig0019615:86508-86527 None:intergenic 35.0%
TTCAAGACTATAAACGGTGA+AGG - tig0019615:86679-86698 None:intergenic 35.0%
! TTCACCGTTTATAGTCTTGA+AGG + tig0019615:86678-86697 Msa1374930:CDS 35.0%
TGGAAGTTCATTCTATGAGT+TGG - tig0019615:86742-86761 None:intergenic 35.0%
TAGAATGAACTTCCAAGACA+TGG + tig0019615:86747-86766 Msa1374930:CDS 35.0%
AGAATGAACTTCCAAGACAT+GGG + tig0019615:86748-86767 Msa1374930:CDS 35.0%
TATATCTTTCTCCCATGTCT+TGG - tig0019615:86762-86781 None:intergenic 35.0%
ACATGGGAGAAAGATATATC+AGG + tig0019615:86764-86783 Msa1374930:CDS 35.0%
CCTGCTAAAATGTAACACTT+CGG - tig0019615:86993-87012 None:intergenic 35.0%
!! CGAAGTGTTACATTTTAGCA+GGG + tig0019615:86991-87010 Msa1374930:three_prime_UTR 35.0%
!! GATGACAATGGTTGATGAAG+GGG - tig0019615:82637-82656 None:intergenic 40.0%
! TAGTTTGCATCACAGGGTTA+GGG - tig0019615:82923-82942 None:intergenic 40.0%
! ATAGTTTGCATCACAGGGTT+AGG - tig0019615:82924-82943 None:intergenic 40.0%
!! ATCTTGTTATTGGCTTGGGA+AGG - tig0019615:83116-83135 None:intergenic 40.0%
CCCAAGCCAATAACAAGATT+TGG + tig0019615:83117-83136 Msa1374930:CDS 40.0%
! GAGAATCCAGCTACGATTTT+TGG + tig0019615:83141-83160 Msa1374930:CDS 40.0%
GTCATTCCAAAAATCGTAGC+TGG - tig0019615:83150-83169 None:intergenic 40.0%
CATGTCCAATGACATATCAC+CGG - tig0019615:83279-83298 None:intergenic 40.0%
ATTGGACATGGATTTGGAGA+TGG + tig0019615:83289-83308 Msa1374930:CDS 40.0%
! CGAGTTGAAAGTTAGTTTCG+AGG + tig0019615:83388-83407 Msa1374930:CDS 40.0%
GAACCAGCTTCAAATTCGAA+TGG + tig0019615:83410-83429 Msa1374930:CDS 40.0%
! ATCCCATTCGAATTTGAAGC+TGG - tig0019615:83416-83435 None:intergenic 40.0%
AGATCTTCTATCCGGTTCAT+CGG - tig0019615:83684-83703 None:intergenic 40.0%
! AAATCGAGTCAGCTTTTGTC+CGG + tig0019615:83716-83735 Msa1374930:CDS 40.0%
CTTTGAGTGTTCCTTTGTTG+AGG + tig0019615:83885-83904 Msa1374930:CDS 40.0%
! AGAGTCTTATCCCTCAACAA+AGG - tig0019615:83899-83918 None:intergenic 40.0%
!!! GGCAGCTTAAGTTTTGGAAA+TGG + tig0019615:83921-83940 Msa1374930:CDS 40.0%
!! GTGGTAGATTGGTTTCTGAT+TGG + tig0019615:83969-83988 Msa1374930:CDS 40.0%
!!! TAGGGCTTGTTTTGATTGCA+TGG + tig0019615:84098-84117 Msa1374930:CDS 40.0%
TGTCCTTCAATATGTGACCA+AGG + tig0019615:84165-84184 Msa1374930:CDS 40.0%
CAAGAAACAGACCAAAACCT+TGG - tig0019615:84185-84204 None:intergenic 40.0%
!! CAAGGTTTTGGTCTGTTTCT+TGG + tig0019615:84183-84202 Msa1374930:CDS 40.0%
!! GTTTTGGTCTGTTTCTTGGT+GGG + tig0019615:84187-84206 Msa1374930:CDS 40.0%
GTGGTTGTTGAAAACTCTAG+TGG + tig0019615:84219-84238 Msa1374930:CDS 40.0%
GTTTGTGATCGAAACACTCT+CGG + tig0019615:84312-84331 Msa1374930:CDS 40.0%
TTTGTGATCGAAACACTCTC+GGG + tig0019615:84313-84332 Msa1374930:CDS 40.0%
TCCACTCTTGATGTTAGGAA+AGG - tig0019615:84452-84471 None:intergenic 40.0%
TTCCTAACATCAAGAGTGGA+AGG + tig0019615:84452-84471 Msa1374930:CDS 40.0%
AACCTTCCACTCTTGATGTT+AGG - tig0019615:84457-84476 None:intergenic 40.0%
!! GATGATAATGGGATTGGGAA+TGG + tig0019615:84550-84569 Msa1374930:CDS 40.0%
GCTGAATCCAAATAACGTGT+CGG + tig0019615:84606-84625 Msa1374930:CDS 40.0%
! AATGAATATGGTTCGGCATG+GGG + tig0019615:84648-84667 Msa1374930:CDS 40.0%
AAGTATACAGGTGTCAGGTA+TGG - tig0019615:84871-84890 None:intergenic 40.0%
CTGCAGGTTTATATATCCTG+AGG + tig0019615:85357-85376 Msa1374930:intron 40.0%
!! AAGTTTGTTCACTGCGGTTT+TGG - tig0019615:86001-86020 None:intergenic 40.0%
! TCGATGAAGTTTGTTCACTG+CGG - tig0019615:86007-86026 None:intergenic 40.0%
CATCTATCTCCCACATCAAA+TGG - tig0019615:86204-86223 None:intergenic 40.0%
ATCGTATCTCAGAAATACGG+TGG - tig0019615:86374-86393 None:intergenic 40.0%
TAGTAGCAAGGACACTGTTA+GGG - tig0019615:86414-86433 None:intergenic 40.0%
TTAGTAGCAAGGACACTGTT+AGG - tig0019615:86415-86434 None:intergenic 40.0%
TAACAGTGTCCTTGCTACTA+AGG + tig0019615:86414-86433 Msa1374930:CDS 40.0%
! TATGTATGGCCTTAGTAGCA+AGG - tig0019615:86426-86445 None:intergenic 40.0%
TCAATAGAATCTCCCATGTC+AGG - tig0019615:86463-86482 None:intergenic 40.0%
!!! GAGTGAAATCTTTTCAGGTG+GGG - tig0019615:86506-86525 None:intergenic 40.0%
! TTGATAACAAGAAGGAGCAC+TGG + tig0019615:86650-86669 Msa1374930:CDS 40.0%
GGATCACGATCAATTGAACA+TGG + tig0019615:86699-86718 Msa1374930:CDS 40.0%
ACATGGTTAAAGTGGCAATC+TGG + tig0019615:86716-86735 Msa1374930:CDS 40.0%
TGGGAGAAAGATATATCAGG+AGG + tig0019615:86767-86786 Msa1374930:CDS 40.0%
GCTCTAACATTAATGTCGAG+AGG - tig0019615:86856-86875 None:intergenic 40.0%
ACATGAGGCTACTAAGTACA+TGG - tig0019615:86952-86971 None:intergenic 40.0%
!! CCGAAGTGTTACATTTTAGC+AGG + tig0019615:86990-87009 Msa1374930:three_prime_UTR 40.0%
!! GTGTTACATTTTAGCAGGGT+AGG + tig0019615:86995-87014 Msa1374930:three_prime_UTR 40.0%
!! TCAGTAAGGTGTTGGATAAG+AGG - tig0019615:87166-87185 None:intergenic 40.0%
!! TCTTTCTAGGACGATGTGAG+GGG - tig0019615:82720-82739 None:intergenic 45.0%
!! GTCTTTCTAGGACGATGTGA+GGG - tig0019615:82721-82740 None:intergenic 45.0%
GTCGTGAAAATCAACGACGA+CGG + tig0019615:83083-83102 Msa1374930:CDS 45.0%
!! GATCCTCTAGCTTAGCTTTG+TGG - tig0019615:83211-83230 None:intergenic 45.0%
CGGTGATATGTCATTGGACA+TGG + tig0019615:83277-83296 Msa1374930:CDS 45.0%
ATGGAGGAGCTTCAGAATGA+AGG + tig0019615:83308-83327 Msa1374930:CDS 45.0%
AATGAAGGTAACGTCGCTGA+CGG + tig0019615:83323-83342 Msa1374930:CDS 45.0%
AAGCTGTGAACGATCCTGTT+CGG + tig0019615:83438-83457 Msa1374930:CDS 45.0%
AATGACGACGGTCGTGATTA+GGG - tig0019615:83520-83539 None:intergenic 45.0%
GTTCCTCTCAAACGAAGCAT+TGG - tig0019615:83597-83616 None:intergenic 45.0%
GATCTTCTATCCGGTTCATC+GGG - tig0019615:83683-83702 None:intergenic 45.0%
GATGAACCGGATAGAAGATC+TGG + tig0019615:83683-83702 Msa1374930:CDS 45.0%
AACCGGATAGAAGATCTGGT+CGG + tig0019615:83687-83706 Msa1374930:CDS 45.0%
! AATCGAGTCAGCTTTTGTCC+GGG + tig0019615:83717-83736 Msa1374930:CDS 45.0%
! AGCTTTTGTCCGGGATGATT+GGG + tig0019615:83726-83745 Msa1374930:CDS 45.0%
TGTTGAGGGATAAGACTCTG+TGG + tig0019615:83900-83919 Msa1374930:CDS 45.0%
! CTCTGTGGCAGCTTAAGTTT+TGG + tig0019615:83915-83934 Msa1374930:CDS 45.0%
!! GGTTTTGGTCTGTTTCTTGG+TGG + tig0019615:84186-84205 Msa1374930:CDS 45.0%
! CTGTTTCTTGGTGGGTACTT+TGG + tig0019615:84195-84214 Msa1374930:CDS 45.0%
TTGTGATCGAAACACTCTCG+GGG + tig0019615:84314-84333 Msa1374930:CDS 45.0%
TTTCGAATCTCCACCAAAGG+CGG - tig0019615:84340-84359 None:intergenic 45.0%
TTTGGTGGAGATTCGAAAGG+CGG + tig0019615:84342-84361 Msa1374930:CDS 45.0%
GTTCAGAAGTTGCAGAATGC+CGG + tig0019615:84394-84413 Msa1374930:CDS 45.0%
!! TAGGAAAGGCACTAGCTCTT+AGG - tig0019615:84438-84457 None:intergenic 45.0%
GCCTTTCCTAACATCAAGAG+TGG + tig0019615:84448-84467 Msa1374930:CDS 45.0%
ACATCAAGAGTGGAAGGTTG+AGG + tig0019615:84458-84477 Msa1374930:CDS 45.0%
AATGCTTCAGAAAAGCCCTG+TGG + tig0019615:84486-84505 Msa1374930:CDS 45.0%
AAAAGCCCTGTGGTTAAGAG+TGG + tig0019615:84496-84515 Msa1374930:CDS 45.0%
ACTTGCCACTCTTAACCACA+GGG - tig0019615:84504-84523 None:intergenic 45.0%
AACTTGCCACTCTTAACCAC+AGG - tig0019615:84505-84524 None:intergenic 45.0%
!! GATAATGGGATTGGGAATGG+TGG + tig0019615:84553-84572 Msa1374930:CDS 45.0%
!! ATCCAAATAACGTGTCGGCT+TGG + tig0019615:84611-84630 Msa1374930:CDS 45.0%
TTCCAAGCCGACACGTTATT+TGG - tig0019615:84616-84635 None:intergenic 45.0%
!! TGTCGGCTTGGAATATGAAG+AGG + tig0019615:84623-84642 Msa1374930:CDS 45.0%
TTTCAGAATGTTGCTAGGCG+TGG + tig0019615:84775-84794 Msa1374930:CDS 45.0%
GGATGTCTTCCCCTTCTATT+TGG + tig0019615:85008-85027 Msa1374930:intron 45.0%
AAACCTGCAGTGCAGCATAA+AGG - tig0019615:85347-85366 None:intergenic 45.0%
! GCGTTTTATGCGAGAAGATG+AGG + tig0019615:85387-85406 Msa1374930:CDS 45.0%
!! TTTGAAGGAGCGTCTGATTC+TGG + tig0019615:85430-85449 Msa1374930:CDS 45.0%
!! TTGAAGGAGCGTCTGATTCT+GGG + tig0019615:85431-85450 Msa1374930:CDS 45.0%
CAAATCCGCGTTGAAGAACT+GGG + tig0019615:85462-85481 Msa1374930:CDS 45.0%
!! GATGCAACTAGTCTTAGGCA+GGG - tig0019615:85719-85738 None:intergenic 45.0%
!! AGATGCAACTAGTCTTAGGC+AGG - tig0019615:85720-85739 None:intergenic 45.0%
TTGTCCAGGTTAATGCCTTC+AGG + tig0019615:85941-85960 Msa1374930:intron 45.0%
TGTCCAGGTTAATGCCTTCA+GGG + tig0019615:85942-85961 Msa1374930:intron 45.0%
TGTGAGCTCACAACTTGTCT+TGG + tig0019615:86110-86129 Msa1374930:CDS 45.0%
ATGTGAAATTGATGCGACCC+AGG + tig0019615:86221-86240 Msa1374930:CDS 45.0%
GTCTTCTTGCAATGCAAACC+TGG + tig0019615:86277-86296 Msa1374930:intron 45.0%
ACAAGCAAAAATGAGGGGAG+GGG - tig0019615:86315-86334 None:intergenic 45.0%
CACAAGCAAAAATGAGGGGA+GGG - tig0019615:86316-86335 None:intergenic 45.0%
TTTCTACCGTAGTCCTGACA+TGG + tig0019615:86447-86466 Msa1374930:CDS 45.0%
TTCTACCGTAGTCCTGACAT+GGG + tig0019615:86448-86467 Msa1374930:CDS 45.0%
AATCTCCCATGTCAGGACTA+CGG - tig0019615:86456-86475 None:intergenic 45.0%
! TAATGTCGAGAGGCATGAGA+CGG - tig0019615:86846-86865 None:intergenic 45.0%
GTGATTGTTGTCCAACTAGC+TGG - tig0019615:86904-86923 None:intergenic 45.0%
TGAGGCTACTAAGTACATGG+TGG - tig0019615:86949-86968 None:intergenic 45.0%
ACATAATGCCACGCAACATG+AGG - tig0019615:86967-86986 None:intergenic 45.0%
!!! TAATGTTTTTAAATAATTTA+TGG - tig0019615:82607-82626 None:intergenic 5.0%
TTGCAGAGAGAGAGTTGTGG+TGG - tig0019615:82583-82602 None:intergenic 50.0%
GGATTGCAGAGAGAGAGTTG+TGG - tig0019615:82586-82605 None:intergenic 50.0%
!! GGTCTTTCTAGGACGATGTG+AGG - tig0019615:82722-82741 None:intergenic 50.0%
AATAGGGAGCTGTTCGTGGT+CGG - tig0019615:83012-83031 None:intergenic 50.0%
! GATTTTCACGACGACGTCTC+CGG - tig0019615:83075-83094 None:intergenic 50.0%
GTGAAAATCAACGACGACGG+CGG + tig0019615:83086-83105 Msa1374930:CDS 50.0%
CTCATCACGAACATTGTCGC+CGG - tig0019615:83174-83193 None:intergenic 50.0%
!! CCTCTAGCTTAGCTTTGTGG+CGG - tig0019615:83208-83227 None:intergenic 50.0%
GATCCACCGTCGCAACTAAT+CGG + tig0019615:83227-83246 Msa1374930:CDS 50.0%
! TTTCCGATTAGTTGCGACGG+TGG - tig0019615:83233-83252 None:intergenic 50.0%
CTTCATAAACAGCGTGCCTC+CGG + tig0019615:83257-83276 Msa1374930:CDS 50.0%
TGCCTCCGGTGATATGTCAT+TGG + tig0019615:83271-83290 Msa1374930:CDS 50.0%
GTCCAATGACATATCACCGG+AGG - tig0019615:83276-83295 None:intergenic 50.0%
GGACATGGATTTGGAGATGG+AGG + tig0019615:83292-83311 Msa1374930:CDS 50.0%
AACTCGCGTTGAATCACCGT+GGG - tig0019615:83374-83393 None:intergenic 50.0%
TTGCTGTGTCTTCTCCGAAC+AGG - tig0019615:83455-83474 None:intergenic 50.0%
TGTTCGGAGAAGACACAGCA+AGG + tig0019615:83454-83473 Msa1374930:CDS 50.0%
AGCAAGGATTCGCCGTCAAT+GGG + tig0019615:83470-83489 Msa1374930:CDS 50.0%
CGAGCATACTCACCCATTGA+CGG - tig0019615:83485-83504 None:intergenic 50.0%
CGTCAATGGGTGAGTATGCT+CGG + tig0019615:83483-83502 Msa1374930:CDS 50.0%
ATGACGACGGTCGTGATTAG+GGG - tig0019615:83519-83538 None:intergenic 50.0%
GAATGACGACGGTCGTGATT+AGG - tig0019615:83521-83540 None:intergenic 50.0%
!! CAGGTGATGGAGAATGACGA+CGG - tig0019615:83532-83551 None:intergenic 50.0%
TCGTCATTCTCCATCACCTG+CGG + tig0019615:83532-83551 Msa1374930:CDS 50.0%
!! TAATGGTGGTGGTGATTGCG+AGG + tig0019615:83556-83575 Msa1374930:CDS 50.0%
! GTGGTGATTGCGAGGTTTTG+AGG + tig0019615:83564-83583 Msa1374930:CDS 50.0%
!! CCTCTCAAACGAAGCATTGG+AGG - tig0019615:83594-83613 None:intergenic 50.0%
CCTCCAATGCTTCGTTTGAG+AGG + tig0019615:83591-83610 Msa1374930:CDS 50.0%
ATCGGGTGGGTCCATTAATC+TGG - tig0019615:83666-83685 None:intergenic 50.0%
TTCTATCCGGTTCATCGGGT+GGG - tig0019615:83679-83698 None:intergenic 50.0%
ACCGGATAGAAGATCTGGTC+GGG + tig0019615:83688-83707 Msa1374930:CDS 50.0%
ACCCGACCAGATCTTCTATC+CGG - tig0019615:83692-83711 None:intergenic 50.0%
! CAGCTTTTGTCCGGGATGAT+TGG + tig0019615:83725-83744 Msa1374930:CDS 50.0%
! TTTTGTCCGGGATGATTGGG+AGG + tig0019615:83729-83748 Msa1374930:CDS 50.0%
ACCTTTCCTCCCAATCATCC+CGG - tig0019615:83738-83757 None:intergenic 50.0%
! TCTTGGTGGGTACTTTGGTG+TGG + tig0019615:84200-84219 Msa1374930:CDS 50.0%
GCCTTTGGTGGAGATTCGAA+AGG + tig0019615:84339-84358 Msa1374930:CDS 50.0%
GCCTTTCGAATCTCCACCAA+AGG - tig0019615:84343-84362 None:intergenic 50.0%
!! AGAGGAAAGGCTTGCTGATG+AGG + tig0019615:84372-84391 Msa1374930:CDS 50.0%
GTCAGCAGGTATGCTAACAC+CGG - tig0019615:84416-84435 None:intergenic 50.0%
AAGAGTGGAAGGTTGAGGAG+TGG + tig0019615:84463-84482 Msa1374930:CDS 50.0%
AATGGGATTGGGAATGGTGG+TGG + tig0019615:84556-84575 Msa1374930:CDS 50.0%
! GCATGGGGCACTTACTACAT+TGG + tig0019615:84663-84682 Msa1374930:CDS 50.0%
CTTCCTTTATGCTGCACTGC+AGG + tig0019615:85341-85360 Msa1374930:intron 50.0%
GCAAATCCGCGTTGAAGAAC+TGG + tig0019615:85461-85480 Msa1374930:CDS 50.0%
TACCACCCAGTTCTTCAACG+CGG - tig0019615:85470-85489 None:intergenic 50.0%
!! ATCGAGAGAGTATTCGTGCC+TGG + tig0019615:85829-85848 Msa1374930:intron 50.0%
!! TCTCCCTGAAGGCATTAACC+TGG - tig0019615:85948-85967 None:intergenic 50.0%
AGGTTAATGCCTTCAGGGAG+AGG + tig0019615:85947-85966 Msa1374930:intron 50.0%
GAGGGGGACAAAATTAGACC+AGG - tig0019615:86298-86317 None:intergenic 50.0%
CAAGCAAAAATGAGGGGAGG+GGG - tig0019615:86314-86333 None:intergenic 50.0%
CCACAAGCAAAAATGAGGGG+AGG - tig0019615:86317-86336 None:intergenic 50.0%
!! CCTCCCCTCATTTTTGCTTG+TGG + tig0019615:86314-86333 Msa1374930:intron 50.0%
! TTTCAGGTGGGGTAGCTACA+TGG - tig0019615:86495-86514 None:intergenic 50.0%
GGAAGACGATCAGAAGTGGT+AGG - tig0019615:86883-86902 None:intergenic 50.0%
AGCTGGAAGACGATCAGAAG+TGG - tig0019615:86887-86906 None:intergenic 50.0%
CTGATCGTCTTCCAGCTAGT+TGG + tig0019615:86890-86909 Msa1374930:CDS 50.0%
CTTAGTAGCCTCATGTTGCG+TGG + tig0019615:86956-86975 Msa1374930:three_prime_UTR 50.0%
TAGAGAGTCGCGACTCAGTA+AGG - tig0019615:87180-87199 None:intergenic 50.0%
TCACAGGGTTAGGGTCTCTC+TGG - tig0019615:82914-82933 None:intergenic 55.0%
GGAGAATAGGGAGCTGTTCG+TGG - tig0019615:83016-83035 None:intergenic 55.0%
GTTGGCGGTCGTGGAGAATA+GGG - tig0019615:83028-83047 None:intergenic 55.0%
TGTTGGCGGTCGTGGAGAAT+AGG - tig0019615:83029-83048 None:intergenic 55.0%
GAAAAGAGCGGCTGCTGTGT+TGG - tig0019615:83046-83065 None:intergenic 55.0%
! CAGCAGCCGCTCTTTTCCTA+TGG + tig0019615:83049-83068 Msa1374930:CDS 55.0%
! AGCCGCTCTTTTCCTATGGC+CGG + tig0019615:83053-83072 Msa1374930:CDS 55.0%
CTCCGGCCATAGGAAAAGAG+CGG - tig0019615:83058-83077 None:intergenic 55.0%
CCGCCACAAAGCTAAGCTAG+AGG + tig0019615:83205-83224 Msa1374930:CDS 55.0%
CGCTGACGGAAAGTTAACGC+CGG + tig0019615:83337-83356 Msa1374930:CDS 55.0%
TGACGGAAAGTTAACGCCGG+TGG + tig0019615:83340-83359 Msa1374930:CDS 55.0%
CAACTCGCGTTGAATCACCG+TGG - tig0019615:83375-83394 None:intergenic 55.0%
CAGCAAGGATTCGCCGTCAA+TGG + tig0019615:83469-83488 Msa1374930:CDS 55.0%
TCGTGATTAGGGGGTTGTGG+AGG - tig0019615:83509-83528 None:intergenic 55.0%
TGACGACGGTCGTGATTAGG+GGG - tig0019615:83518-83537 None:intergenic 55.0%
CGTCATTCTCCATCACCTGC+GGG + tig0019615:83533-83552 Msa1374930:CDS 55.0%
TCTCCATCACCTGCGGGTAA+TGG + tig0019615:83539-83558 Msa1374930:CDS 55.0%
AATGGACCCACCCGATGAAC+CGG + tig0019615:83670-83689 Msa1374930:CDS 55.0%
CTTCTATCCGGTTCATCGGG+TGG - tig0019615:83680-83699 None:intergenic 55.0%
TCCGGGATGATTGGGAGGAA+AGG + tig0019615:83734-83753 Msa1374930:CDS 55.0%
GGAGATTCGAAAGGCGGAAG+AGG + tig0019615:84348-84367 Msa1374930:CDS 55.0%
TCGAAAGGCGGAAGAGGAAG+AGG + tig0019615:84354-84373 Msa1374930:CDS 55.0%
AGGCGGAAGAGGAAGAGGAA+AGG + tig0019615:84359-84378 Msa1374930:CDS 55.0%
! GCACTAGCTCTTAGGTCAGC+AGG - tig0019615:84430-84449 None:intergenic 55.0%
!! GGATTGGGAATGGTGGTGGT+GGG + tig0019615:84560-84579 Msa1374930:CDS 55.0%
ATCCGCGTTGAAGAACTGGG+TGG + tig0019615:85465-85484 Msa1374930:CDS 55.0%
GGCAGGGTCAAACAGAGCTT+AGG - tig0019615:85703-85722 None:intergenic 55.0%
GTCGCGACTCAGTAAGGTGT+TGG - tig0019615:87174-87193 None:intergenic 55.0%
AAGAGCGGCTGCTGTGTTGG+CGG - tig0019615:83043-83062 None:intergenic 60.0%
CGGAAAGTTAACGCCGGTGG+AGG + tig0019615:83343-83362 Msa1374930:CDS 60.0%
ACCGTGGGAGATTCCTCCAC+CGG - tig0019615:83359-83378 None:intergenic 60.0%
CGGTCGTGATTAGGGGGTTG+TGG - tig0019615:83512-83531 None:intergenic 60.0%
CCACCATTACCCGCAGGTGA+TGG - tig0019615:83545-83564 None:intergenic 60.0%
! CCATCACCTGCGGGTAATGG+TGG + tig0019615:83542-83561 Msa1374930:CDS 60.0%
! TCACCTGCGGGTAATGGTGG+TGG + tig0019615:83545-83564 Msa1374930:CDS 60.0%
TCACCACCACCATTACCCGC+AGG - tig0019615:83551-83570 None:intergenic 60.0%
!! GGGATTGGGAATGGTGGTGG+TGG + tig0019615:84559-84578 Msa1374930:CDS 60.0%
ATGTTGCTAGGCGTGGCTGC+AGG + tig0019615:84782-84801 Msa1374930:CDS 60.0%
AAGCGCTCTCCTCTCCCTGA+AGG - tig0019615:85959-85978 None:intergenic 60.0%
ACGACGACGTCTCCGGCCAT+AGG - tig0019615:83068-83087 None:intergenic 65.0%
GCCGGTGGAGGAATCTCCCA+CGG + tig0019615:83355-83374 Msa1374930:CDS 65.0%
AACACTCTCGGGGCCGCCTT+TGG + tig0019615:84324-84343 Msa1374930:CDS 65.0%
! GGCTGCTGTGTTGGCGGTCG+TGG - tig0019615:83037-83056 None:intergenic 70.0%
ACTCTCGGGGCCGCCTTTGG+TGG + tig0019615:84327-84346 Msa1374930:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0019615 gene 82579 87223 82579 ID=Msa1374930;Name=Msa1374930
tig0019615 mRNA 82579 87223 82579 ID=Msa1374930-mRNA-1;Parent=Msa1374930;Name=Msa1374930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=354|1|1|1|1|1|5|293|925
tig0019615 exon 82579 84803 82579 ID=Msa1374930-mRNA-1:exon:4164;Parent=Msa1374930-mRNA-1
tig0019615 exon 85363 85486 85363 ID=Msa1374930-mRNA-1:exon:4165;Parent=Msa1374930-mRNA-1
tig0019615 exon 85949 86242 85949 ID=Msa1374930-mRNA-1:exon:4166;Parent=Msa1374930-mRNA-1
tig0019615 exon 86343 86545 86343 ID=Msa1374930-mRNA-1:exon:4167;Parent=Msa1374930-mRNA-1
tig0019615 exon 86645 87223 86645 ID=Msa1374930-mRNA-1:exon:4168;Parent=Msa1374930-mRNA-1
tig0019615 five_prime_UTR 82579 82932 82579 ID=Msa1374930-mRNA-1:five_prime_utr;Parent=Msa1374930-mRNA-1
tig0019615 CDS 82933 84803 82933 ID=Msa1374930-mRNA-1:cds;Parent=Msa1374930-mRNA-1
tig0019615 CDS 85363 85486 85363 ID=Msa1374930-mRNA-1:cds;Parent=Msa1374930-mRNA-1
tig0019615 CDS 85949 86242 85949 ID=Msa1374930-mRNA-1:cds;Parent=Msa1374930-mRNA-1
tig0019615 CDS 86343 86545 86343 ID=Msa1374930-mRNA-1:cds;Parent=Msa1374930-mRNA-1
tig0019615 CDS 86645 86930 86645 ID=Msa1374930-mRNA-1:cds;Parent=Msa1374930-mRNA-1
tig0019615 three_prime_UTR 86931 87223 86931 ID=Msa1374930-mRNA-1:three_prime_utr;Parent=Msa1374930-mRNA-1
Gene Sequence

>Msa1374930

ATGCAAACTATTAAAAAATCCTTCAAATCTTATGCTTCTCAGAACAATAAACATTCTAGAAAATTTTCTGCAGATTCCGACCACGAACAGCTCCCTATTCTCCACGACCGCCAACACAGCAGCCGCTCTTTTCCTATGGCCGGAGACGTCGTCGTGAAAATCAACGACGACGGCGGTGAACCTTCCCAAGCCAATAACAAGATTTGGAGAGAATCCAGCTACGATTTTTGGAATGACACCGGCGACAATGTTCGTGATGAGAGTTTTGATTTCCGCCACAAAGCTAAGCTAGAGGATCCACCGTCGCAACTAATCGGAAAATTTCTTCATAAACAGCGTGCCTCCGGTGATATGTCATTGGACATGGATTTGGAGATGGAGGAGCTTCAGAATGAAGGTAACGTCGCTGACGGAAAGTTAACGCCGGTGGAGGAATCTCCCACGGTGATTCAACGCGAGTTGAAAGTTAGTTTCGAGGAACCAGCTTCAAATTCGAATGGGATTGAAGCTGTGAACGATCCTGTTCGGAGAAGACACAGCAAGGATTCGCCGTCAATGGGTGAGTATGCTCGGCCTCCACAACCCCCTAATCACGACCGTCGTCATTCTCCATCACCTGCGGGTAATGGTGGTGGTGATTGCGAGGTTTTGAGGTGTTCCTCCAATGCTTCGTTTGAGAGGAACCTCTCAATGCAGAGAAAATCAACGTTAATGAAAACTAAAACTAAGTCCAGATTAATGGACCCACCCGATGAACCGGATAGAAGATCTGGTCGGGTTGCTAAATCGAGTCAGCTTTTGTCCGGGATGATTGGGAGGAAAGGTGATGATGATGAAGATGATCCTTTTATGGAAGAGGATTTTCCAGATGAGTATAAGAAAACACATTTCAGTCTTTGGATTCTTCTTGAATGGTTGAGTTTGATTTTAATTATTGGTGCATTAGTAACAACTTTGAGTGTTCCTTTGTTGAGGGATAAGACTCTGTGGCAGCTTAAGTTTTGGAAATGGGAAGTGATGATTCTTGTTCTAATATGTGGTAGATTGGTTTCTGATTGGGTTATTAGGATTGCTGTGTTTTGTATTGAAAGGAATTTCCTATTGAGAAAGAGGGTTCTTTATTTTGTGTATGGTGTCAGGAAAGCTGTGCAAAATTGTGTTTGGTTAGGGCTTGTTTTGATTGCATGGCATTTTCTGTTTGATAAGAGAGTTCAAAGAGAGACAAACAGTGATGTCCTTCAATATGTGACCAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGTTGAAAACTCTAGTGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATACTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTGATCGAAACACTCTCGGGGCCGCCTTTGGTGGAGATTCGAAAGGCGGAAGAGGAAGAGGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAGAATGCCGGTGTTAGCATACCTGCTGACCTAAGAGCTAGTGCCTTTCCTAACATCAAGAGTGGAAGGTTGAGGAGTGGAATGCTTCAGAAAAGCCCTGTGGTTAAGAGTGGCAAGTTTTCAATGCCACTTTCCAAGAAATCTGATGATAATGGGATTGGGAATGGTGGTGGTGGGATAACTATTGATCACTTGCACAAGCTGAATCCAAATAACGTGTCGGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCATGGGGCACTTACTACATTGGATGAGCAGATACTTGATTCTTCTGCTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGTGGCTGCAGGTTTATATATCCTGAGGACTTAATGCGTTTTATGCGAGAAGATGAGGCTATAAAAACCATAAATCTATTTGAAGGAGCGTCTGATTCTGGGAAAATCAGCAAATCCGCGTTGAAGAACTGGGTGGTTAATGCCTTCAGGGAGAGGAGAGCGCTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAACAAACTTCATCGAATGCTCAATTTCTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCTACTACCAAATTTCTTCTTTTTGTGAGCTCACAACTTGTCTTGGTTGCATTTATATTCGGAAACACATGCAAGACTGTATTTGAAGCAATCATATTTTTATTTGTAATGCATCCATTTGATGTGGGAGATAGATGTGAAATTGATGCGACCCAGATGGTTGTCGAAGAGATGAACATCTTGACCACCGTATTTCTGAGATACGATAATCAAAAGATAACGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGTAGTCCTGACATGGGAGATTCTATTGAATTCTGTATCCATGTAGCTACCCCACCTGAAAAGATTTCACTCATGAAACACAGAATACATAATTTCATTGATAACAAGAAGGAGCACTGGTATCCTTCACCGTTTATAGTCTTGAAGGATCACGATCAATTGAACATGGTTAAAGTGGCAATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATATATCAGGAGGTCTCTTCTTATTGAAGAGTTGATGAAGATTTTCAGGGATCTCGACATTCAGTACCGTCTCATGCCTCTCGACATTAATGTTAGAGCTTTGCCTACCACTTCTGATCGTCTTCCAGCTAGTTGGACAACAATCACAAATTGA
Protein sequence

>Msa1374930

MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGEPSQANNKIWRESSYDFWNDTGDNVRDESFDFRHKAKLEDPPSQLIGKFLHKQRASGDMSLDMDLEMEELQNEGNVADGKLTPVEESPTVIQRELKVSFEEPASNSNGIEAVNDPVRRRHSKDSPSMGEYARPPQPPNHDRRHSPSPAGNGGGDCEVLRCSSNASFERNLSMQRKSTLMKTKTKSRLMDPPDEPDRRSGRVAKSSQLLSGMIGRKGDDDEDDPFMEEDFPDEYKKTHFSLWILLEWLSLILIIGALVTTLSVPLLRDKTLWQLKFWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETNSDVLQYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVSIPADLRASAFPNIKSGRLRSGMLQKSPVVKSGKFSMPLSKKSDDNGIGNGGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSSADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRYDNQKITIPNSVLATKAIHNFYRSPDMGDSIEFCIHVATPPEKISLMKHRIHNFIDNKKEHWYPSPFIVLKDHDQLNMVKVAIWPTHRMNFQDMGERYIRRSLLIEELMKIFRDLDIQYRLMPLDINVRALPTTSDRLPASWTTITN*