Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034390 | XP_003625128.1 | 95.933 | 541 | 20 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034390 | sp|Q9SS43|MUC21_ARATH | 56.112 | 499 | 174 | 10 | 35 | 527 | 34 | 493 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034390 | G7KTG8 | 95.933 | 541 | 20 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1083 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1034390 | Msa1074140 | 0.913659 | 4.760348e-84 | -8.615850e-47 |
| Msa1034390 | Msa1114620 | 0.897429 | 1.418899e-76 | -8.615850e-47 |
| Msa1034390 | Msa1159600 | 0.912740 | 1.377262e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034390 | MtrunA17_Chr7g0257291 | 95.933 | 541 | 20 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1083 |
| Msa1034390 | MtrunA17_Chr5g0418341 | 35.374 | 441 | 227 | 7 | 97 | 531 | 17 | 405 | 3.28e-83 | 265 |
| Msa1034390 | MtrunA17_Chr8g0392591 | 34.752 | 423 | 224 | 8 | 106 | 524 | 148 | 522 | 1.60e-79 | 258 |
| Msa1034390 | MtrunA17_Chr5g0418331 | 36.702 | 376 | 198 | 8 | 161 | 531 | 30 | 370 | 3.25e-74 | 240 |
| Msa1034390 | MtrunA17_Chr5g0398231 | 30.214 | 374 | 167 | 9 | 109 | 477 | 33 | 317 | 1.47e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034390 | AT2G41640.1 | 58.083 | 532 | 176 | 6 | 1 | 529 | 1 | 488 | 0.0 | 625 |
| Msa1034390 | AT2G41640.2 | 58.654 | 520 | 168 | 6 | 1 | 517 | 1 | 476 | 0.0 | 614 |
| Msa1034390 | AT2G41640.3 | 64.352 | 432 | 113 | 3 | 99 | 529 | 4 | 395 | 0.0 | 585 |
| Msa1034390 | AT3G57380.1 | 56.514 | 545 | 178 | 10 | 6 | 538 | 3 | 500 | 0.0 | 583 |
| Msa1034390 | AT3G10320.1 | 56.112 | 499 | 174 | 10 | 35 | 527 | 34 | 493 | 0.0 | 546 |
| Msa1034390 | AT3G57380.2 | 61.485 | 431 | 120 | 6 | 115 | 538 | 1 | 392 | 0.0 | 530 |
| Msa1034390 | AT3G57380.3 | 61.485 | 431 | 120 | 6 | 115 | 538 | 1 | 392 | 0.0 | 530 |
| Msa1034390 | AT2G03370.2 | 35.506 | 445 | 222 | 8 | 97 | 533 | 66 | 453 | 2.46e-91 | 287 |
| Msa1034390 | AT2G03370.1 | 35.506 | 445 | 222 | 8 | 97 | 533 | 64 | 451 | 2.81e-91 | 287 |
| Msa1034390 | AT2G03360.2 | 35.811 | 444 | 224 | 8 | 97 | 533 | 65 | 454 | 6.67e-88 | 278 |
| Msa1034390 | AT2G03360.1 | 35.811 | 444 | 224 | 8 | 97 | 533 | 61 | 450 | 8.73e-88 | 278 |
| Msa1034390 | AT3G18180.1 | 31.163 | 430 | 231 | 9 | 101 | 524 | 93 | 463 | 3.83e-67 | 224 |
| Msa1034390 | AT3G18170.1 | 30.824 | 425 | 233 | 8 | 109 | 524 | 10 | 382 | 2.98e-64 | 214 |
| Msa1034390 | AT3G18170.2 | 31.529 | 425 | 230 | 7 | 109 | 524 | 161 | 533 | 7.10e-63 | 215 |
Find 95 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTGTTAATGCTTTC+AGG | 0.044050 | 7_1:-69852937 | None:intergenic |
| TAAGGTCTAATTTAACATTT+TGG | 0.163748 | 7_1:-69852993 | None:intergenic |
| CTAGAGACAATAACCAATTT+TGG | 0.203861 | 7_1:-69852556 | None:intergenic |
| CAGAATTGGCAAAGATTTAT+AGG | 0.211001 | 7_1:+69852674 | Msa1034390:CDS |
| ACTTGAATGAACACAGATTT+AGG | 0.221082 | 7_1:-69852766 | None:intergenic |
| TTGTTCCTCTTGGTACTAAT+TGG | 0.239064 | 7_1:+69852788 | Msa1034390:CDS |
| TGCACGAACGAAACCAAAAT+TGG | 0.247732 | 7_1:+69852543 | Msa1034390:CDS |
| TGTTGATTTCAGAAACCTTT+TGG | 0.250209 | 7_1:+69852384 | Msa1034390:CDS |
| GCTTATTCGCCTCGGATAAA+AGG | 0.255535 | 7_1:+69852412 | Msa1034390:CDS |
| CTTATGAGTACACAGTTCTT+AGG | 0.273170 | 7_1:+69853043 | Msa1034390:CDS |
| GTCTCCCACTTTCTAGTATA+GGG | 0.278642 | 7_1:-69851968 | None:intergenic |
| GTGAAGGGTTTGTGAGGTTT+TGG | 0.285617 | 7_1:-69850767 | None:intergenic |
| AAGAGAAAAGACAATAGTTT+TGG | 0.286461 | 7_1:-69850915 | None:intergenic |
| AAACCCTTCACCTTCCAAAA+TGG | 0.293776 | 7_1:+69850779 | Msa1034390:exon |
| CTTTCAGGGTCTCTCAAAAT+AGG | 0.299027 | 7_1:-69852922 | None:intergenic |
| GAATGGTGGATCACGAAATA+TGG | 0.319520 | 7_1:+69852214 | Msa1034390:CDS |
| ATGTTAAATTAGACCTTAGA+AGG | 0.322345 | 7_1:+69852998 | Msa1034390:CDS |
| TTCAAACCAAGCTTCCTTGC+AGG | 0.322763 | 7_1:-69852835 | None:intergenic |
| TGTTTCTCTGAAGCTATTGT+TGG | 0.334836 | 7_1:+69852301 | Msa1034390:CDS |
| GTGAAAGTGGCAGAGGAAAT+TGG | 0.335220 | 7_1:+69852616 | Msa1034390:CDS |
| AATTAGACCTTAGAAGGTTC+AGG | 0.335913 | 7_1:+69853004 | Msa1034390:CDS |
| CTTTCTTGTTAATGCTTTCA+GGG | 0.346346 | 7_1:-69852936 | None:intergenic |
| TGTTCCTCTTGGTACTAATT+GGG | 0.362453 | 7_1:+69852789 | Msa1034390:CDS |
| TTCATTCAAGTTGTTCCTCT+TGG | 0.365056 | 7_1:+69852778 | Msa1034390:CDS |
| AGAATTGGCAAAGATTTATA+GGG | 0.370292 | 7_1:+69852675 | Msa1034390:CDS |
| TTCACAGTGGTTGGTGTTGA+AGG | 0.385507 | 7_1:-69853077 | None:intergenic |
| TTATCATTGCTAAAATTAAT+CGG | 0.390442 | 7_1:-69852268 | None:intergenic |
| GCGAATAAGCTTTGTCCAAA+AGG | 0.394660 | 7_1:-69852399 | None:intergenic |
| TGTCTCCCACTTTCTAGTAT+AGG | 0.400966 | 7_1:-69851969 | None:intergenic |
| ACGGTGGTGATGAACCATTT+TGG | 0.409686 | 7_1:-69850793 | None:intergenic |
| AGCCGTGGACTCCGCATTGA+TGG | 0.415036 | 7_1:+69852345 | Msa1034390:CDS |
| ACCTTAGAAGGTTCAGGAAA+AGG | 0.416677 | 7_1:+69853010 | Msa1034390:CDS |
| ACCACTTCTATCACAACATA+TGG | 0.435687 | 7_1:-69851777 | None:intergenic |
| ATATGCTCTTCAGTTTCTAC+TGG | 0.444078 | 7_1:+69851189 | Msa1034390:CDS |
| TGGGCTGCAGATACTTATTA+CGG | 0.445783 | 7_1:+69852808 | Msa1034390:CDS |
| ATTGAATCTCATTTCAAAGA+AGG | 0.447770 | 7_1:+69852015 | Msa1034390:CDS |
| GACGTTATGATTGGTGTTCA+TGG | 0.453758 | 7_1:+69852712 | Msa1034390:CDS |
| GCCACAACAATAACGTTTCA+AGG | 0.455624 | 7_1:+69851882 | Msa1034390:CDS |
| TCTTCATCTTTGATATACTC+TGG | 0.459293 | 7_1:-69850837 | None:intergenic |
| TTCACAACATTTCAACAAGA+AGG | 0.461145 | 7_1:+69852165 | Msa1034390:CDS |
| GGCGAACCTGCAAGGAAGCT+TGG | 0.468064 | 7_1:+69852829 | Msa1034390:CDS |
| TTCTCGAATGGAGGCTACAC+TGG | 0.476480 | 7_1:+69852094 | Msa1034390:CDS |
| TCATATAAAGAGCTTTCCTT+AGG | 0.480215 | 7_1:-69852880 | None:intergenic |
| TGAGAATTTGCTAGTGAAAG+TGG | 0.480344 | 7_1:+69852603 | Msa1034390:CDS |
| AATGAGATTCAATTCATCAA+TGG | 0.480428 | 7_1:-69852005 | None:intergenic |
| GACTAATTCAAGACGAGGAA+AGG | 0.480754 | 7_1:+69852434 | Msa1034390:CDS |
| CGACATCCTTTCTCATCTAT+CGG | 0.481184 | 7_1:+69852237 | Msa1034390:CDS |
| CATGTATATCAACACCATCT+TGG | 0.485415 | 7_1:-69851161 | None:intergenic |
| AAGCTTGGTTTGAAATACAT+TGG | 0.491787 | 7_1:+69852844 | Msa1034390:CDS |
| AATGAAAGCGACGTTATGAT+TGG | 0.497226 | 7_1:+69852703 | Msa1034390:CDS |
| CCTGAAAGCATTAACAAGAA+AGG | 0.500548 | 7_1:+69852937 | Msa1034390:CDS |
| TCCTTGAAACGTTATTGTTG+TGG | 0.502883 | 7_1:-69851883 | None:intergenic |
| AACATAGCAACAAGAGAGAA+AGG | 0.504395 | 7_1:-69850946 | None:intergenic |
| CTGAAAGCATTAACAAGAAA+GGG | 0.509340 | 7_1:+69852938 | Msa1034390:CDS |
| ACTAATTCAAGACGAGGAAA+GGG | 0.519987 | 7_1:+69852435 | Msa1034390:CDS |
| TGGCTATGAAATTCATCCTA+AGG | 0.521370 | 7_1:+69852864 | Msa1034390:CDS |
| AGGACTATTGAAGCTAGAAA+AGG | 0.521445 | 7_1:+69851902 | Msa1034390:CDS |
| TTGGTTATTGTCTCTAGAAG+TGG | 0.526248 | 7_1:+69852562 | Msa1034390:CDS |
| TAAAGCCCTATACTAGAAAG+TGG | 0.527288 | 7_1:+69851963 | Msa1034390:CDS |
| TTCCATCAATGCGGAGTCCA+CGG | 0.533701 | 7_1:-69852347 | None:intergenic |
| TAGAAAAGGTGAAGATGAAG+AGG | 0.534977 | 7_1:+69851916 | Msa1034390:CDS |
| AATTTCTTGCAGTCCTTGTG+AGG | 0.539409 | 7_1:-69852521 | None:intergenic |
| TATATCAACACCATCTTGGT+TGG | 0.540099 | 7_1:-69851157 | None:intergenic |
| GTTGTAGAGGAAGATTGAAG+AGG | 0.546253 | 7_1:-69851852 | None:intergenic |
| TGGACAAAGCTTATTCGCCT+CGG | 0.561151 | 7_1:+69852404 | Msa1034390:CDS |
| ACATCACAACCTTGAACACT+AGG | 0.565753 | 7_1:-69852046 | None:intergenic |
| TGATACTTGAATATCATGAA+TGG | 0.565861 | 7_1:+69852197 | Msa1034390:CDS |
| TGGAAGGTGAAGGGTTTGTG+AGG | 0.572042 | 7_1:-69850773 | None:intergenic |
| TTTGCTAGTGAAAGTGGCAG+AGG | 0.572568 | 7_1:+69852609 | Msa1034390:CDS |
| GAAAATCCGATAGATGAGAA+AGG | 0.577569 | 7_1:-69852243 | None:intergenic |
| GAGGTTTCTGATTCTGATGA+CGG | 0.580011 | 7_1:-69852502 | None:intergenic |
| AACAAGAGAGAAAGGTGATG+AGG | 0.590096 | 7_1:-69850938 | None:intergenic |
| ATGGGAAAATTCACAGTGGT+TGG | 0.595256 | 7_1:-69853086 | None:intergenic |
| AAAGCATTAACAAGAAAGGG+TGG | 0.599234 | 7_1:+69852941 | Msa1034390:CDS |
| CTTATTACGGCGAACCTGCA+AGG | 0.602890 | 7_1:+69852821 | Msa1034390:CDS |
| AAGCATTAACAAGAAAGGGT+GGG | 0.613905 | 7_1:+69852942 | Msa1034390:CDS |
| AATTCATGATGAACTAGCCG+TGG | 0.615819 | 7_1:+69852330 | Msa1034390:CDS |
| GTGGACTCCGCATTGATGGA+AGG | 0.622255 | 7_1:+69852349 | Msa1034390:CDS |
| AAAGTGGGAGACAAGTGTCA+TGG | 0.623072 | 7_1:+69851979 | Msa1034390:CDS |
| GAAAATGATGCCAACCAAGA+TGG | 0.628586 | 7_1:+69851147 | Msa1034390:CDS |
| TACTTGAATATCATGAATGG+TGG | 0.629903 | 7_1:+69852200 | Msa1034390:CDS |
| TGTGGCTTATTGAGTTGTAG+AGG | 0.630051 | 7_1:-69851865 | None:intergenic |
| AAAGCCCTATACTAGAAAGT+GGG | 0.635292 | 7_1:+69851964 | Msa1034390:CDS |
| TTCTAAGTTGATGGTAACGG+TGG | 0.640364 | 7_1:-69850809 | None:intergenic |
| TCTGATATCTGTGTGATGAA+AGG | 0.641175 | 7_1:+69851806 | Msa1034390:CDS |
| ACCATATGTTGTGATAGAAG+TGG | 0.645949 | 7_1:+69851776 | Msa1034390:CDS |
| TGTTGTGAAGTGATGTACAA+AGG | 0.651312 | 7_1:-69852151 | None:intergenic |
| TTTGTTACCTTCCATCAATG+CGG | 0.659307 | 7_1:-69852356 | None:intergenic |
| TCATTGCTAAAATTAATCGG+TGG | 0.663275 | 7_1:-69852265 | None:intergenic |
| GTGTATCACGAATTCAACGA+TGG | 0.678441 | 7_1:+69852121 | Msa1034390:CDS |
| AAAAGGACTAATTCAAGACG+AGG | 0.679852 | 7_1:+69852429 | Msa1034390:CDS |
| GCAGCCCAATTAGTACCAAG+AGG | 0.687233 | 7_1:-69852793 | None:intergenic |
| TCAGAATCAGAAACCTCACA+AGG | 0.718316 | 7_1:+69852508 | Msa1034390:CDS |
| TCATCACACAGATATCAGAA+CGG | 0.725384 | 7_1:-69851802 | None:intergenic |
| TGGAATGGGAAAATTCACAG+TGG | 0.794884 | 7_1:-69853090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_1:69850993-69851012 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_1:69851630-69851649 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_1:69851631-69851650 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_1:69851679-69851698 | None:intergenic | 15.0% |
| !! | TTATCATTGCTAAAATTAAT+CGG | - | chr7_1:69852271-69852290 | None:intergenic | 15.0% |
| !!! | TTAATTTTAGCAATGATAAT+CGG | + | chr7_1:69852272-69852291 | Msa1034390:CDS | 15.0% |
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_1:69850993-69851012 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_1:69851630-69851649 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_1:69851631-69851650 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_1:69851679-69851698 | None:intergenic | 15.0% |
| !! | TTATCATTGCTAAAATTAAT+CGG | - | chr7_1:69852271-69852290 | None:intergenic | 15.0% |
| !!! | TTAATTTTAGCAATGATAAT+CGG | + | chr7_1:69852272-69852291 | Msa1034390:CDS | 15.0% |
| !!! | ATTCATCATAATGATTTTCA+AGG | + | chr7_1:69851446-69851465 | Msa1034390:intron | 20.0% |
| !!! | TTCATCATAATGATTTTCAA+GGG | + | chr7_1:69851447-69851466 | Msa1034390:intron | 20.0% |
| !! | GAATATGGAAAATAACAATT+TGG | - | chr7_1:69851664-69851683 | None:intergenic | 20.0% |
| !! | AGTAAACAACAATATATAAG+GGG | - | chr7_1:69851706-69851725 | None:intergenic | 20.0% |
| !! | GAGTAAACAACAATATATAA+GGG | - | chr7_1:69851707-69851726 | None:intergenic | 20.0% |
| !! | AGAGTAAACAACAATATATA+AGG | - | chr7_1:69851708-69851727 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_1:69852996-69853015 | None:intergenic | 20.0% |
| !!! | ATTCATCATAATGATTTTCA+AGG | + | chr7_1:69851446-69851465 | Msa1034390:intron | 20.0% |
| !!! | TTCATCATAATGATTTTCAA+GGG | + | chr7_1:69851447-69851466 | Msa1034390:intron | 20.0% |
| !! | GAATATGGAAAATAACAATT+TGG | - | chr7_1:69851664-69851683 | None:intergenic | 20.0% |
| !! | AGTAAACAACAATATATAAG+GGG | - | chr7_1:69851706-69851725 | None:intergenic | 20.0% |
| !! | GAGTAAACAACAATATATAA+GGG | - | chr7_1:69851707-69851726 | None:intergenic | 20.0% |
| !! | AGAGTAAACAACAATATATA+AGG | - | chr7_1:69851708-69851727 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_1:69852996-69853015 | None:intergenic | 20.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_1:69850918-69850937 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTGTTAATCCAA+TGG | - | chr7_1:69851423-69851442 | None:intergenic | 25.0% |
| !!! | TCATCATAATGATTTTCAAG+GGG | + | chr7_1:69851448-69851467 | Msa1034390:intron | 25.0% |
| ! | GTAAACAACAATATATAAGG+GGG | - | chr7_1:69851705-69851724 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_1:69851752-69851771 | Msa1034390:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_1:69852008-69852027 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_1:69852015-69852034 | Msa1034390:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_1:69852197-69852216 | Msa1034390:CDS | 25.0% |
| ! | AGAATTGGCAAAGATTTATA+GGG | + | chr7_1:69852675-69852694 | Msa1034390:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_1:69852998-69853017 | Msa1034390:CDS | 25.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_1:69850918-69850937 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTGTTAATCCAA+TGG | - | chr7_1:69851423-69851442 | None:intergenic | 25.0% |
| !!! | TCATCATAATGATTTTCAAG+GGG | + | chr7_1:69851448-69851467 | Msa1034390:intron | 25.0% |
| ! | GTAAACAACAATATATAAGG+GGG | - | chr7_1:69851705-69851724 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_1:69851752-69851771 | Msa1034390:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_1:69852008-69852027 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_1:69852015-69852034 | Msa1034390:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_1:69852197-69852216 | Msa1034390:CDS | 25.0% |
| ! | AGAATTGGCAAAGATTTATA+GGG | + | chr7_1:69852675-69852694 | Msa1034390:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_1:69852998-69853017 | Msa1034390:CDS | 25.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_1:69850815-69850834 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_1:69850840-69850859 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_1:69850986-69851005 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_1:69851078-69851097 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_1:69851120-69851139 | Msa1034390:intron | 30.0% |
| ! | TTCTTAGCTCGAACAATTTT+TGG | + | chr7_1:69851331-69851350 | Msa1034390:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_1:69851539-69851558 | Msa1034390:intron | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_1:69851763-69851782 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_1:69852165-69852184 | Msa1034390:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_1:69852200-69852219 | Msa1034390:CDS | 30.0% | |
| TCATTGCTAAAATTAATCGG+TGG | - | chr7_1:69852268-69852287 | None:intergenic | 30.0% | |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_1:69852384-69852403 | Msa1034390:CDS | 30.0% |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_1:69852559-69852578 | None:intergenic | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_1:69852660-69852679 | Msa1034390:CDS | 30.0% | |
| CAGAATTGGCAAAGATTTAT+AGG | + | chr7_1:69852674-69852693 | Msa1034390:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_1:69852769-69852788 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_1:69852844-69852863 | Msa1034390:CDS | 30.0% |
| TCATATAAAGAGCTTTCCTT+AGG | - | chr7_1:69852883-69852902 | None:intergenic | 30.0% | |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_1:69852939-69852958 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_1:69852938-69852957 | Msa1034390:CDS | 30.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_1:69850815-69850834 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_1:69850840-69850859 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_1:69850986-69851005 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_1:69851078-69851097 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_1:69851120-69851139 | Msa1034390:intron | 30.0% |
| ! | TTCTTAGCTCGAACAATTTT+TGG | + | chr7_1:69851331-69851350 | Msa1034390:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_1:69851539-69851558 | Msa1034390:intron | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_1:69851763-69851782 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_1:69852165-69852184 | Msa1034390:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_1:69852200-69852219 | Msa1034390:CDS | 30.0% | |
| TCATTGCTAAAATTAATCGG+TGG | - | chr7_1:69852268-69852287 | None:intergenic | 30.0% | |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_1:69852384-69852403 | Msa1034390:CDS | 30.0% |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_1:69852559-69852578 | None:intergenic | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_1:69852660-69852679 | Msa1034390:CDS | 30.0% | |
| CAGAATTGGCAAAGATTTAT+AGG | + | chr7_1:69852674-69852693 | Msa1034390:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_1:69852769-69852788 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_1:69852844-69852863 | Msa1034390:CDS | 30.0% |
| TCATATAAAGAGCTTTCCTT+AGG | - | chr7_1:69852883-69852902 | None:intergenic | 30.0% | |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_1:69852939-69852958 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_1:69852938-69852957 | Msa1034390:CDS | 30.0% |
| !! | TTTTGGAAGAAAGTGAGGTT+TGG | - | chr7_1:69850753-69850772 | None:intergenic | 35.0% |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_1:69850821-69850840 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_1:69850949-69850968 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_1:69850966-69850985 | Msa1034390:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_1:69850978-69850997 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_1:69851038-69851057 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_1:69851127-69851146 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_1:69851160-69851179 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_1:69851164-69851183 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_1:69851189-69851208 | Msa1034390:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_1:69851370-69851389 | Msa1034390:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_1:69851479-69851498 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_1:69851480-69851499 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_1:69851505-69851524 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_1:69851513-69851532 | Msa1034390:intron | 35.0% |
| ATCATGGTTGGAACAATTCT+TGG | - | chr7_1:69851594-69851613 | None:intergenic | 35.0% | |
| TAACGAGTTTGAATCATGGT+TGG | - | chr7_1:69851606-69851625 | None:intergenic | 35.0% | |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_1:69851776-69851795 | Msa1034390:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_1:69851780-69851799 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_1:69851805-69851824 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_1:69851806-69851825 | Msa1034390:CDS | 35.0% | |
| TCCTTGAAACGTTATTGTTG+TGG | - | chr7_1:69851886-69851905 | None:intergenic | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_1:69851902-69851921 | Msa1034390:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_1:69851916-69851935 | Msa1034390:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_1:69851952-69851971 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGAAAG+TGG | + | chr7_1:69851963-69851982 | Msa1034390:CDS | 35.0% | |
| AAAGCCCTATACTAGAAAGT+GGG | + | chr7_1:69851964-69851983 | Msa1034390:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_1:69852154-69852173 | None:intergenic | 35.0% | |
| GAAAATCCGATAGATGAGAA+AGG | - | chr7_1:69852246-69852265 | None:intergenic | 35.0% | |
| !! | TGTTTCTCTGAAGCTATTGT+TGG | + | chr7_1:69852301-69852320 | Msa1034390:CDS | 35.0% |
| TTTGTTACCTTCCATCAATG+CGG | - | chr7_1:69852359-69852378 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_1:69852424-69852443 | None:intergenic | 35.0% |
| AAAAGGACTAATTCAAGACG+AGG | + | chr7_1:69852429-69852448 | Msa1034390:CDS | 35.0% | |
| ACTAATTCAAGACGAGGAAA+GGG | + | chr7_1:69852435-69852454 | Msa1034390:CDS | 35.0% | |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_1:69852562-69852581 | Msa1034390:CDS | 35.0% |
| !! | TGAGAATTTGCTAGTGAAAG+TGG | + | chr7_1:69852603-69852622 | Msa1034390:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_1:69852664-69852683 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_1:69852703-69852722 | Msa1034390:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_1:69852778-69852797 | Msa1034390:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_1:69852788-69852807 | Msa1034390:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_1:69852789-69852808 | Msa1034390:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_1:69852864-69852883 | Msa1034390:CDS | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_1:69852940-69852959 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_1:69852937-69852956 | Msa1034390:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_1:69852941-69852960 | Msa1034390:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_1:69852942-69852961 | Msa1034390:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_1:69853004-69853023 | Msa1034390:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_1:69853043-69853062 | Msa1034390:CDS | 35.0% | |
| !! | TTTTGGAAGAAAGTGAGGTT+TGG | - | chr7_1:69850753-69850772 | None:intergenic | 35.0% |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_1:69850821-69850840 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_1:69850949-69850968 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_1:69850966-69850985 | Msa1034390:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_1:69850978-69850997 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_1:69851038-69851057 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_1:69851127-69851146 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_1:69851160-69851179 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_1:69851164-69851183 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_1:69851189-69851208 | Msa1034390:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_1:69851370-69851389 | Msa1034390:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_1:69851479-69851498 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_1:69851480-69851499 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_1:69851505-69851524 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_1:69851513-69851532 | Msa1034390:intron | 35.0% |
| ATCATGGTTGGAACAATTCT+TGG | - | chr7_1:69851594-69851613 | None:intergenic | 35.0% | |
| TAACGAGTTTGAATCATGGT+TGG | - | chr7_1:69851606-69851625 | None:intergenic | 35.0% | |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_1:69851776-69851795 | Msa1034390:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_1:69851780-69851799 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_1:69851805-69851824 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_1:69851806-69851825 | Msa1034390:CDS | 35.0% | |
| TCCTTGAAACGTTATTGTTG+TGG | - | chr7_1:69851886-69851905 | None:intergenic | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_1:69851902-69851921 | Msa1034390:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_1:69851916-69851935 | Msa1034390:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_1:69851952-69851971 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGAAAG+TGG | + | chr7_1:69851963-69851982 | Msa1034390:CDS | 35.0% | |
| AAAGCCCTATACTAGAAAGT+GGG | + | chr7_1:69851964-69851983 | Msa1034390:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_1:69852154-69852173 | None:intergenic | 35.0% | |
| GAAAATCCGATAGATGAGAA+AGG | - | chr7_1:69852246-69852265 | None:intergenic | 35.0% | |
| !! | TGTTTCTCTGAAGCTATTGT+TGG | + | chr7_1:69852301-69852320 | Msa1034390:CDS | 35.0% |
| TTTGTTACCTTCCATCAATG+CGG | - | chr7_1:69852359-69852378 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_1:69852424-69852443 | None:intergenic | 35.0% |
| AAAAGGACTAATTCAAGACG+AGG | + | chr7_1:69852429-69852448 | Msa1034390:CDS | 35.0% | |
| ACTAATTCAAGACGAGGAAA+GGG | + | chr7_1:69852435-69852454 | Msa1034390:CDS | 35.0% | |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_1:69852562-69852581 | Msa1034390:CDS | 35.0% |
| !! | TGAGAATTTGCTAGTGAAAG+TGG | + | chr7_1:69852603-69852622 | Msa1034390:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_1:69852664-69852683 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_1:69852703-69852722 | Msa1034390:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_1:69852778-69852797 | Msa1034390:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_1:69852788-69852807 | Msa1034390:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_1:69852789-69852808 | Msa1034390:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_1:69852864-69852883 | Msa1034390:CDS | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_1:69852940-69852959 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_1:69852937-69852956 | Msa1034390:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_1:69852941-69852960 | Msa1034390:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_1:69852942-69852961 | Msa1034390:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_1:69853004-69853023 | Msa1034390:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_1:69853043-69853062 | Msa1034390:CDS | 35.0% | |
| !!! | TGAGGTTTTGGAAGAAAGTG+AGG | - | chr7_1:69850758-69850777 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_1:69850779-69850798 | Msa1034390:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_1:69850785-69850804 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_1:69850786-69850805 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_1:69850792-69850811 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_1:69850812-69850831 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_1:69850941-69850960 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_1:69851147-69851166 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_1:69851147-69851166 | Msa1034390:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_1:69851280-69851299 | Msa1034390:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_1:69851284-69851303 | Msa1034390:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_1:69851285-69851304 | Msa1034390:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_1:69851355-69851374 | Msa1034390:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_1:69851371-69851390 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_1:69851406-69851425 | None:intergenic | 40.0% | |
| ! | CTCTTTGGCTTAAGAACCAT+TGG | + | chr7_1:69851404-69851423 | Msa1034390:intron | 40.0% |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_1:69851460-69851479 | Msa1034390:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_1:69851491-69851510 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_1:69851551-69851570 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_1:69851610-69851629 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_1:69851855-69851874 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_1:69851868-69851887 | None:intergenic | 40.0% |
| GCCACAACAATAACGTTTCA+AGG | + | chr7_1:69851882-69851901 | Msa1034390:CDS | 40.0% | |
| ! | GTCTCCCACTTTCTAGTATA+GGG | - | chr7_1:69851971-69851990 | None:intergenic | 40.0% |
| ! | TGTCTCCCACTTTCTAGTAT+AGG | - | chr7_1:69851972-69851991 | None:intergenic | 40.0% |
| ACATCACAACCTTGAACACT+AGG | - | chr7_1:69852049-69852068 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_1:69852121-69852140 | Msa1034390:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_1:69852214-69852233 | Msa1034390:CDS | 40.0% |
| CGACATCCTTTCTCATCTAT+CGG | + | chr7_1:69852237-69852256 | Msa1034390:CDS | 40.0% | |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_1:69852330-69852349 | Msa1034390:CDS | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_1:69852402-69852421 | None:intergenic | 40.0% |
| GACTAATTCAAGACGAGGAA+AGG | + | chr7_1:69852434-69852453 | Msa1034390:CDS | 40.0% | |
| GAGGTTTCTGATTCTGATGA+CGG | - | chr7_1:69852505-69852524 | None:intergenic | 40.0% | |
| TCAGAATCAGAAACCTCACA+AGG | + | chr7_1:69852508-69852527 | Msa1034390:CDS | 40.0% | |
| AATTTCTTGCAGTCCTTGTG+AGG | - | chr7_1:69852524-69852543 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_1:69852543-69852562 | Msa1034390:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_1:69852624-69852643 | Msa1034390:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_1:69852712-69852731 | Msa1034390:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_1:69852808-69852827 | Msa1034390:CDS | 40.0% | |
| CTTTCAGGGTCTCTCAAAAT+AGG | - | chr7_1:69852925-69852944 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_1:69853010-69853029 | Msa1034390:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_1:69853014-69853033 | None:intergenic | 40.0% |
| !!! | TGAGGTTTTGGAAGAAAGTG+AGG | - | chr7_1:69850758-69850777 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_1:69850779-69850798 | Msa1034390:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_1:69850785-69850804 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_1:69850786-69850805 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_1:69850792-69850811 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_1:69850812-69850831 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_1:69850941-69850960 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_1:69851147-69851166 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_1:69851147-69851166 | Msa1034390:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_1:69851280-69851299 | Msa1034390:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_1:69851284-69851303 | Msa1034390:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_1:69851285-69851304 | Msa1034390:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_1:69851355-69851374 | Msa1034390:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_1:69851371-69851390 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_1:69851406-69851425 | None:intergenic | 40.0% | |
| ! | CTCTTTGGCTTAAGAACCAT+TGG | + | chr7_1:69851404-69851423 | Msa1034390:intron | 40.0% |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_1:69851460-69851479 | Msa1034390:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_1:69851491-69851510 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_1:69851551-69851570 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_1:69851610-69851629 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_1:69851855-69851874 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_1:69851868-69851887 | None:intergenic | 40.0% |
| GCCACAACAATAACGTTTCA+AGG | + | chr7_1:69851882-69851901 | Msa1034390:CDS | 40.0% | |
| ! | GTCTCCCACTTTCTAGTATA+GGG | - | chr7_1:69851971-69851990 | None:intergenic | 40.0% |
| ! | TGTCTCCCACTTTCTAGTAT+AGG | - | chr7_1:69851972-69851991 | None:intergenic | 40.0% |
| ACATCACAACCTTGAACACT+AGG | - | chr7_1:69852049-69852068 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_1:69852121-69852140 | Msa1034390:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_1:69852214-69852233 | Msa1034390:CDS | 40.0% |
| CGACATCCTTTCTCATCTAT+CGG | + | chr7_1:69852237-69852256 | Msa1034390:CDS | 40.0% | |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_1:69852330-69852349 | Msa1034390:CDS | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_1:69852402-69852421 | None:intergenic | 40.0% |
| GACTAATTCAAGACGAGGAA+AGG | + | chr7_1:69852434-69852453 | Msa1034390:CDS | 40.0% | |
| GAGGTTTCTGATTCTGATGA+CGG | - | chr7_1:69852505-69852524 | None:intergenic | 40.0% | |
| TCAGAATCAGAAACCTCACA+AGG | + | chr7_1:69852508-69852527 | Msa1034390:CDS | 40.0% | |
| AATTTCTTGCAGTCCTTGTG+AGG | - | chr7_1:69852524-69852543 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_1:69852543-69852562 | Msa1034390:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_1:69852624-69852643 | Msa1034390:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_1:69852712-69852731 | Msa1034390:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_1:69852808-69852827 | Msa1034390:CDS | 40.0% | |
| CTTTCAGGGTCTCTCAAAAT+AGG | - | chr7_1:69852925-69852944 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_1:69853010-69853029 | Msa1034390:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_1:69853014-69853033 | None:intergenic | 40.0% |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_1:69850770-69850789 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_1:69850796-69850815 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_1:69851289-69851308 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_1:69851298-69851317 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_1:69851301-69851320 | Msa1034390:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_1:69851385-69851404 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_1:69851389-69851408 | Msa1034390:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_1:69851546-69851565 | Msa1034390:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_1:69851552-69851571 | None:intergenic | 45.0% | |
| AAAGTGGGAGACAAGTGTCA+TGG | + | chr7_1:69851979-69851998 | Msa1034390:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_1:69852085-69852104 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_1:69852082-69852101 | Msa1034390:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_1:69852085-69852104 | Msa1034390:CDS | 45.0% |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_1:69852404-69852423 | Msa1034390:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_1:69852412-69852431 | Msa1034390:CDS | 45.0% | |
| TTTGCTAGTGAAAGTGGCAG+AGG | + | chr7_1:69852609-69852628 | Msa1034390:CDS | 45.0% | |
| GTGAAAGTGGCAGAGGAAAT+TGG | + | chr7_1:69852616-69852635 | Msa1034390:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_1:69852838-69852857 | None:intergenic | 45.0% | |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_1:69850770-69850789 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_1:69850796-69850815 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_1:69851289-69851308 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_1:69851298-69851317 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_1:69851301-69851320 | Msa1034390:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_1:69851385-69851404 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_1:69851389-69851408 | Msa1034390:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_1:69851546-69851565 | Msa1034390:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_1:69851552-69851571 | None:intergenic | 45.0% | |
| AAAGTGGGAGACAAGTGTCA+TGG | + | chr7_1:69851979-69851998 | Msa1034390:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_1:69852085-69852104 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_1:69852082-69852101 | Msa1034390:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_1:69852085-69852104 | Msa1034390:CDS | 45.0% |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_1:69852404-69852423 | Msa1034390:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_1:69852412-69852431 | Msa1034390:CDS | 45.0% | |
| TTTGCTAGTGAAAGTGGCAG+AGG | + | chr7_1:69852609-69852628 | Msa1034390:CDS | 45.0% | |
| GTGAAAGTGGCAGAGGAAAT+TGG | + | chr7_1:69852616-69852635 | Msa1034390:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_1:69852838-69852857 | None:intergenic | 45.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_1:69850776-69850795 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_1:69852037-69852056 | Msa1034390:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_1:69852094-69852113 | Msa1034390:CDS | 50.0% | |
| TTCCATCAATGCGGAGTCCA+CGG | - | chr7_1:69852350-69852369 | None:intergenic | 50.0% | |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_1:69852796-69852815 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_1:69852821-69852840 | Msa1034390:CDS | 50.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_1:69850776-69850795 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_1:69852037-69852056 | Msa1034390:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_1:69852094-69852113 | Msa1034390:CDS | 50.0% | |
| TTCCATCAATGCGGAGTCCA+CGG | - | chr7_1:69852350-69852369 | None:intergenic | 50.0% | |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_1:69852796-69852815 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_1:69852821-69852840 | Msa1034390:CDS | 50.0% | |
| ! | GTGGACTCCGCATTGATGGA+AGG | + | chr7_1:69852349-69852368 | Msa1034390:CDS | 55.0% |
| ! | GTGGACTCCGCATTGATGGA+AGG | + | chr7_1:69852349-69852368 | Msa1034390:CDS | 55.0% |
| AGCCGTGGACTCCGCATTGA+TGG | + | chr7_1:69852345-69852364 | Msa1034390:CDS | 60.0% | |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_1:69852829-69852848 | Msa1034390:CDS | 60.0% | |
| AGCCGTGGACTCCGCATTGA+TGG | + | chr7_1:69852345-69852364 | Msa1034390:CDS | 60.0% | |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_1:69852829-69852848 | Msa1034390:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 69850734 | 69853098 | 69850734 | ID=Msa1034390;Name=Msa1034390 |
| chr7_1 | mRNA | 69850734 | 69853098 | 69850734 | ID=Msa1034390-mRNA-1;Parent=Msa1034390;Name=Msa1034390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=64|1|0.66|1|1|1|3|0|539 |
| chr7_1 | exon | 69850734 | 69851014 | 69850734 | ID=Msa1034390-mRNA-1:exon:16513;Parent=Msa1034390-mRNA-1 |
| chr7_1 | exon | 69851133 | 69851210 | 69851133 | ID=Msa1034390-mRNA-1:exon:16514;Parent=Msa1034390-mRNA-1 |
| chr7_1 | exon | 69851774 | 69853098 | 69851774 | ID=Msa1034390-mRNA-1:exon:16515;Parent=Msa1034390-mRNA-1 |
| chr7_1 | five_prime_UTR | 69850734 | 69850797 | 69850734 | ID=Msa1034390-mRNA-1:five_prime_utr;Parent=Msa1034390-mRNA-1 |
| chr7_1 | CDS | 69850798 | 69851014 | 69850798 | ID=Msa1034390-mRNA-1:cds;Parent=Msa1034390-mRNA-1 |
| chr7_1 | CDS | 69851133 | 69851210 | 69851133 | ID=Msa1034390-mRNA-1:cds;Parent=Msa1034390-mRNA-1 |
| chr7_1 | CDS | 69851774 | 69853098 | 69851774 | ID=Msa1034390-mRNA-1:cds;Parent=Msa1034390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
