Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074140 | XP_003625128.1 | 95.564 | 541 | 22 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074140 | sp|Q9SS43|MUC21_ARATH | 55.912 | 499 | 175 | 10 | 35 | 527 | 34 | 493 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074140 | G7KTG8 | 95.564 | 541 | 22 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0799620 | Msa1074140 | 0.809143 | 2.188861e-50 | -8.615850e-47 |
| Msa1034390 | Msa1074140 | 0.913659 | 4.760348e-84 | -8.615850e-47 |
| Msa1074140 | Msa1114620 | 0.903781 | 2.431242e-79 | -8.615850e-47 |
| Msa1074140 | Msa1159600 | 0.915426 | 5.973589e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074140 | MtrunA17_Chr7g0257291 | 95.564 | 541 | 22 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Msa1074140 | MtrunA17_Chr5g0418341 | 35.601 | 441 | 226 | 7 | 97 | 531 | 17 | 405 | 1.05e-83 | 266 |
| Msa1074140 | MtrunA17_Chr8g0392591 | 35.225 | 423 | 222 | 8 | 106 | 524 | 148 | 522 | 1.96e-81 | 263 |
| Msa1074140 | MtrunA17_Chr5g0418331 | 36.702 | 376 | 198 | 8 | 161 | 531 | 30 | 370 | 2.54e-74 | 240 |
| Msa1074140 | MtrunA17_Chr5g0398231 | 30.214 | 374 | 167 | 9 | 109 | 477 | 33 | 317 | 1.85e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074140 | AT2G41640.1 | 57.707 | 532 | 178 | 6 | 1 | 529 | 1 | 488 | 0.0 | 622 |
| Msa1074140 | AT2G41640.2 | 58.269 | 520 | 170 | 6 | 1 | 517 | 1 | 476 | 0.0 | 610 |
| Msa1074140 | AT2G41640.3 | 63.889 | 432 | 115 | 3 | 99 | 529 | 4 | 395 | 0.0 | 581 |
| Msa1074140 | AT3G57380.1 | 56.147 | 545 | 180 | 10 | 6 | 538 | 3 | 500 | 0.0 | 578 |
| Msa1074140 | AT3G10320.1 | 55.912 | 499 | 175 | 10 | 35 | 527 | 34 | 493 | 0.0 | 545 |
| Msa1074140 | AT3G57380.2 | 60.789 | 431 | 123 | 6 | 115 | 538 | 1 | 392 | 0.0 | 525 |
| Msa1074140 | AT3G57380.3 | 60.789 | 431 | 123 | 6 | 115 | 538 | 1 | 392 | 0.0 | 525 |
| Msa1074140 | AT2G03370.2 | 35.730 | 445 | 221 | 8 | 97 | 533 | 66 | 453 | 1.31e-91 | 288 |
| Msa1074140 | AT2G03370.1 | 35.730 | 445 | 221 | 8 | 97 | 533 | 64 | 451 | 1.61e-91 | 288 |
| Msa1074140 | AT2G03360.1 | 35.586 | 444 | 225 | 8 | 97 | 533 | 61 | 450 | 4.27e-88 | 279 |
| Msa1074140 | AT2G03360.2 | 35.586 | 444 | 225 | 8 | 97 | 533 | 65 | 454 | 4.69e-88 | 279 |
| Msa1074140 | AT3G18180.1 | 30.930 | 430 | 232 | 9 | 101 | 524 | 93 | 463 | 3.58e-66 | 222 |
| Msa1074140 | AT3G18170.1 | 31.294 | 425 | 231 | 7 | 109 | 524 | 10 | 382 | 2.02e-63 | 212 |
| Msa1074140 | AT3G18170.2 | 31.294 | 425 | 231 | 7 | 109 | 524 | 161 | 533 | 3.66e-62 | 213 |
Find 95 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTGTTAATGCTTTC+AGG | 0.044050 | 7_2:-71864068 | None:intergenic |
| TAAGGTCTAATTTAACATTT+TGG | 0.163748 | 7_2:-71864124 | None:intergenic |
| CTAGAGACAATAACCAATTT+TGG | 0.203861 | 7_2:-71863687 | None:intergenic |
| ACTTGAATGAACACAGATTT+AGG | 0.221082 | 7_2:-71863897 | None:intergenic |
| TTGTTCCTCTTGGTACTAAT+TGG | 0.239064 | 7_2:+71863919 | Msa1074140:CDS |
| TGCACGAACGAAACCAAAAT+TGG | 0.247732 | 7_2:+71863674 | Msa1074140:CDS |
| TGTTGATTTCAGAAACCTTT+TGG | 0.250209 | 7_2:+71863515 | Msa1074140:CDS |
| GCTTATTCGCCTCGGATAAA+AGG | 0.255535 | 7_2:+71863543 | Msa1074140:CDS |
| TGAGAATTTGCTAGTGAAAA+TGG | 0.272170 | 7_2:+71863734 | Msa1074140:CDS |
| CTTATGAGTACACAGTTCTT+AGG | 0.273170 | 7_2:+71864174 | Msa1074140:CDS |
| GTCTCCCACTTTCTAGTATA+GGG | 0.278642 | 7_2:-71863099 | None:intergenic |
| GTGAAGGGTTTGTGAGGTTT+TGG | 0.285617 | 7_2:-71861878 | None:intergenic |
| AAGAGAAAAGACAATAGTTT+TGG | 0.286461 | 7_2:-71862026 | None:intergenic |
| GTGAAAATGGCAGAGGAAAT+TGG | 0.288444 | 7_2:+71863747 | Msa1074140:CDS |
| AAACCCTTCACCTTCCAAAA+TGG | 0.293776 | 7_2:+71861890 | Msa1074140:exon |
| GAATGGTGGATCACGAAATA+TGG | 0.319520 | 7_2:+71863345 | Msa1074140:CDS |
| ATGTTAAATTAGACCTTAGA+AGG | 0.322345 | 7_2:+71864129 | Msa1074140:CDS |
| TTCAAACCAAGCTTCCTTGC+AGG | 0.322763 | 7_2:-71863966 | None:intergenic |
| CTTTCAGGGTCACTCAAAAT+AGG | 0.327312 | 7_2:-71864053 | None:intergenic |
| TTGAGACCAACAATGGCTTC+AGG | 0.331391 | 7_2:-71863438 | None:intergenic |
| AATTAGACCTTAGAAGGTTC+AGG | 0.335913 | 7_2:+71864135 | Msa1074140:CDS |
| ATTTAGTACTCTATAAATCT+TGG | 0.345620 | 7_2:-71863814 | None:intergenic |
| CTTTCTTGTTAATGCTTTCA+GGG | 0.359190 | 7_2:-71864067 | None:intergenic |
| TGTTCCTCTTGGTACTAATT+GGG | 0.362453 | 7_2:+71863920 | Msa1074140:CDS |
| TTCATTCAAGTTGTTCCTCT+TGG | 0.365056 | 7_2:+71863909 | Msa1074140:CDS |
| TGTTTCCCTGAAGCCATTGT+TGG | 0.377591 | 7_2:+71863432 | Msa1074140:CDS |
| TTCACAGTGGTTGGTGTTGA+AGG | 0.385507 | 7_2:-71864208 | None:intergenic |
| TTATCTTCGCTAAAATTAAT+CGG | 0.394156 | 7_2:-71863399 | None:intergenic |
| GCGAATAAGCTTTGTCCAAA+AGG | 0.394660 | 7_2:-71863530 | None:intergenic |
| TGTCTCCCACTTTCTAGTAT+AGG | 0.400966 | 7_2:-71863100 | None:intergenic |
| ACGGTGGTGATGAACCATTT+TGG | 0.409686 | 7_2:-71861904 | None:intergenic |
| AGCCGTGGACTCCGCGTTGA+TGG | 0.412942 | 7_2:+71863476 | Msa1074140:CDS |
| ACCTTAGAAGGTTCAGGAAA+AGG | 0.416677 | 7_2:+71864141 | Msa1074140:CDS |
| ACCACTTCTATCACAACATA+TGG | 0.435687 | 7_2:-71862908 | None:intergenic |
| ATATGCTCTTCAGTTTCTAC+TGG | 0.444078 | 7_2:+71862300 | Msa1074140:CDS |
| TGGGCTGCAGATACTTATTA+CGG | 0.445783 | 7_2:+71863939 | Msa1074140:CDS |
| ATTGAATCTCATTTCAAAGA+AGG | 0.447770 | 7_2:+71863146 | Msa1074140:CDS |
| GACGTTATGATTGGTGTTCA+TGG | 0.453758 | 7_2:+71863843 | Msa1074140:CDS |
| TGAGACCAACAATGGCTTCA+GGG | 0.454768 | 7_2:-71863437 | None:intergenic |
| GCCACAACAATAACGTTTCA+AGG | 0.455624 | 7_2:+71863013 | Msa1074140:CDS |
| GAGGTTTCTGATTCCGATGA+TGG | 0.458312 | 7_2:-71863633 | None:intergenic |
| TCTTCATCTTTGATATACTC+TGG | 0.459293 | 7_2:-71861948 | None:intergenic |
| TTCACAACATTTCAACAAGA+AGG | 0.461145 | 7_2:+71863296 | Msa1074140:CDS |
| GGCGAACCTGCAAGGAAGCT+TGG | 0.468064 | 7_2:+71863960 | Msa1074140:CDS |
| TTCTCGAATGGAGGCTACAC+TGG | 0.476480 | 7_2:+71863225 | Msa1074140:CDS |
| TCGTATAAAGAGCTTTCCTT+AGG | 0.479858 | 7_2:-71864011 | None:intergenic |
| AATGAGATTCAATTCATCAA+TGG | 0.480428 | 7_2:-71863136 | None:intergenic |
| CATGTATATCAACACCATCT+TGG | 0.485415 | 7_2:-71862272 | None:intergenic |
| AAGCTTGGTTTGAAATACAT+TGG | 0.491787 | 7_2:+71863975 | Msa1074140:CDS |
| AATGAAAGCGACGTTATGAT+TGG | 0.497226 | 7_2:+71863834 | Msa1074140:CDS |
| CCTGAAAGCATTAACAAGAA+AGG | 0.498109 | 7_2:+71864068 | Msa1074140:CDS |
| TCCTTGAAACGTTATTGTTG+TGG | 0.502883 | 7_2:-71863014 | None:intergenic |
| AACATAGCAACAAGAGAGAA+AGG | 0.504395 | 7_2:-71862057 | None:intergenic |
| CTGAAAGCATTAACAAGAAA+GGG | 0.509340 | 7_2:+71864069 | Msa1074140:CDS |
| AATTTCTTGCACTCCTTGTG+AGG | 0.519149 | 7_2:-71863652 | None:intergenic |
| AGATGAGGAAAGAGAAGCAC+AGG | 0.520097 | 7_2:+71863575 | Msa1074140:CDS |
| TGGCTATGAAATTCATCCTA+AGG | 0.521370 | 7_2:+71863995 | Msa1074140:CDS |
| AGGACTATTGAAGCTAGAAA+AGG | 0.521445 | 7_2:+71863033 | Msa1074140:CDS |
| TTGGTTATTGTCTCTAGAAG+TGG | 0.526248 | 7_2:+71863693 | Msa1074140:CDS |
| TAAAGCCCTATACTAGAAAG+TGG | 0.527288 | 7_2:+71863094 | Msa1074140:CDS |
| TAGAAAAGGTGAAGATGAAG+AGG | 0.534977 | 7_2:+71863047 | Msa1074140:CDS |
| AATCTCTTTATCTCCATCAT+CGG | 0.538693 | 7_2:+71863620 | Msa1074140:CDS |
| TATATCAACACCATCTTGGT+TGG | 0.540099 | 7_2:-71862268 | None:intergenic |
| TTCCATCAACGCGGAGTCCA+CGG | 0.543100 | 7_2:-71863478 | None:intergenic |
| GTTGTAGAGGAAGATTGAAG+AGG | 0.546253 | 7_2:-71862983 | None:intergenic |
| GAAATTCAGATAGATGAGAA+AGG | 0.555067 | 7_2:-71863374 | None:intergenic |
| TGGACAAAGCTTATTCGCCT+CGG | 0.561151 | 7_2:+71863535 | Msa1074140:CDS |
| ACATCACAACCTTGAACACT+AGG | 0.565753 | 7_2:-71863177 | None:intergenic |
| TGATACTTGAATATCATGAA+TGG | 0.565861 | 7_2:+71863328 | Msa1074140:CDS |
| TGGAAGGTGAAGGGTTTGTG+AGG | 0.572042 | 7_2:-71861884 | None:intergenic |
| GTGGACTCCGCGTTGATGGA+AGG | 0.576405 | 7_2:+71863480 | Msa1074140:CDS |
| TTTGCTAGTGAAAATGGCAG+AGG | 0.583094 | 7_2:+71863740 | Msa1074140:CDS |
| AACAAGAGAGAAAGGTGATG+AGG | 0.590096 | 7_2:-71862049 | None:intergenic |
| AAAAGGACTAATTCAAGATG+AGG | 0.590260 | 7_2:+71863560 | Msa1074140:CDS |
| ATGGGAAAATTCACAGTGGT+TGG | 0.595256 | 7_2:-71864217 | None:intergenic |
| AAAGCATTAACAAGAAAGGG+TGG | 0.599234 | 7_2:+71864072 | Msa1074140:CDS |
| CTTATTACGGCGAACCTGCA+AGG | 0.602890 | 7_2:+71863952 | Msa1074140:CDS |
| AAGCATTAACAAGAAAGGGT+GGG | 0.613905 | 7_2:+71864073 | Msa1074140:CDS |
| AATTCATGATGAACTAGCCG+TGG | 0.615819 | 7_2:+71863461 | Msa1074140:CDS |
| AAAGTGGGAGACAAGTGTCA+TGG | 0.623072 | 7_2:+71863110 | Msa1074140:CDS |
| GAAAATGATGCCAACCAAGA+TGG | 0.628586 | 7_2:+71862258 | Msa1074140:CDS |
| TACTTGAATATCATGAATGG+TGG | 0.629903 | 7_2:+71863331 | Msa1074140:CDS |
| TGTGGCTTATTGAGTTGTAG+AGG | 0.630051 | 7_2:-71862996 | None:intergenic |
| AAAGCCCTATACTAGAAAGT+GGG | 0.635292 | 7_2:+71863095 | Msa1074140:CDS |
| TTCTAAGTTGATGGTAACGG+TGG | 0.640364 | 7_2:-71861920 | None:intergenic |
| TCTGATATCTGTGTGATGAA+AGG | 0.641175 | 7_2:+71862937 | Msa1074140:CDS |
| TCTTCGCTAAAATTAATCGG+TGG | 0.642329 | 7_2:-71863396 | None:intergenic |
| ACCATATGTTGTGATAGAAG+TGG | 0.645949 | 7_2:+71862907 | Msa1074140:CDS |
| TGTTGTGAAGTGATGTACAA+AGG | 0.651312 | 7_2:-71863282 | None:intergenic |
| GTGTATCACGAATTCAACGA+TGG | 0.678441 | 7_2:+71863252 | Msa1074140:CDS |
| GCAGCCCAATTAGTACCAAG+AGG | 0.687233 | 7_2:-71863924 | None:intergenic |
| TCATCACACAGATATCAGAA+CGG | 0.725384 | 7_2:-71862933 | None:intergenic |
| TCGGAATCAGAAACCTCACA+AGG | 0.728070 | 7_2:+71863639 | Msa1074140:CDS |
| TTTGTTACCTTCCATCAACG+CGG | 0.736990 | 7_2:-71863487 | None:intergenic |
| TGGAATGGGAAAATTCACAG+TGG | 0.794884 | 7_2:-71864221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_2:71862104-71862123 | None:intergenic | 15.0% |
| !!! | ATTCATTATAATGATTTTCA+AGG | + | chr7_2:71862577-71862596 | Msa1074140:intron | 15.0% |
| !!! | TTCATTATAATGATTTTCAA+GGG | + | chr7_2:71862578-71862597 | Msa1074140:intron | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_2:71862761-71862780 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_2:71862762-71862781 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_2:71862810-71862829 | None:intergenic | 15.0% |
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_2:71862104-71862123 | None:intergenic | 15.0% |
| !!! | ATTCATTATAATGATTTTCA+AGG | + | chr7_2:71862577-71862596 | Msa1074140:intron | 15.0% |
| !!! | TTCATTATAATGATTTTCAA+GGG | + | chr7_2:71862578-71862597 | Msa1074140:intron | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_2:71862761-71862780 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_2:71862762-71862781 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_2:71862810-71862829 | None:intergenic | 15.0% |
| !!! | TGTTTTTTGTGTTAATACAA+TGG | - | chr7_2:71862554-71862573 | None:intergenic | 20.0% |
| !!! | TCATTATAATGATTTTCAAG+GGG | + | chr7_2:71862579-71862598 | Msa1074140:intron | 20.0% |
| !! | GAATATGGAAAATAACAATT+TGG | - | chr7_2:71862795-71862814 | None:intergenic | 20.0% |
| !! | AGTAAACAACAATATATAAG+GGG | - | chr7_2:71862837-71862856 | None:intergenic | 20.0% |
| !! | GAGTAAACAACAATATATAA+GGG | - | chr7_2:71862838-71862857 | None:intergenic | 20.0% |
| !! | AGAGTAAACAACAATATATA+AGG | - | chr7_2:71862839-71862858 | None:intergenic | 20.0% |
| !! | TTATCTTCGCTAAAATTAAT+CGG | - | chr7_2:71863402-71863421 | None:intergenic | 20.0% |
| !!! | TTAATTTTAGCGAAGATAAT+CGG | + | chr7_2:71863403-71863422 | Msa1074140:CDS | 20.0% |
| !! | ATTTAGTACTCTATAAATCT+TGG | - | chr7_2:71863817-71863836 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_2:71864127-71864146 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGTGTTAATACAA+TGG | - | chr7_2:71862554-71862573 | None:intergenic | 20.0% |
| !!! | TCATTATAATGATTTTCAAG+GGG | + | chr7_2:71862579-71862598 | Msa1074140:intron | 20.0% |
| !! | GAATATGGAAAATAACAATT+TGG | - | chr7_2:71862795-71862814 | None:intergenic | 20.0% |
| !! | AGTAAACAACAATATATAAG+GGG | - | chr7_2:71862837-71862856 | None:intergenic | 20.0% |
| !! | GAGTAAACAACAATATATAA+GGG | - | chr7_2:71862838-71862857 | None:intergenic | 20.0% |
| !! | AGAGTAAACAACAATATATA+AGG | - | chr7_2:71862839-71862858 | None:intergenic | 20.0% |
| !! | TTATCTTCGCTAAAATTAAT+CGG | - | chr7_2:71863402-71863421 | None:intergenic | 20.0% |
| !!! | TTAATTTTAGCGAAGATAAT+CGG | + | chr7_2:71863403-71863422 | Msa1074140:CDS | 20.0% |
| !! | ATTTAGTACTCTATAAATCT+TGG | - | chr7_2:71863817-71863836 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_2:71864127-71864146 | None:intergenic | 20.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_2:71862029-71862048 | None:intergenic | 25.0% |
| ! | GTAAACAACAATATATAAGG+GGG | - | chr7_2:71862836-71862855 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_2:71862883-71862902 | Msa1074140:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_2:71863139-71863158 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_2:71863146-71863165 | Msa1074140:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_2:71863328-71863347 | Msa1074140:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_2:71864129-71864148 | Msa1074140:CDS | 25.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_2:71862029-71862048 | None:intergenic | 25.0% |
| ! | GTAAACAACAATATATAAGG+GGG | - | chr7_2:71862836-71862855 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_2:71862883-71862902 | Msa1074140:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_2:71863139-71863158 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_2:71863146-71863165 | Msa1074140:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_2:71863328-71863347 | Msa1074140:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_2:71864129-71864148 | Msa1074140:CDS | 25.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_2:71861926-71861945 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_2:71861951-71861970 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_2:71862097-71862116 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_2:71862189-71862208 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_2:71862231-71862250 | Msa1074140:intron | 30.0% |
| ! | TTCTTAGCTCGAACAATTTT+TGG | + | chr7_2:71862462-71862481 | Msa1074140:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_2:71862670-71862689 | Msa1074140:intron | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_2:71862894-71862913 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_2:71863296-71863315 | Msa1074140:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_2:71863331-71863350 | Msa1074140:CDS | 30.0% | |
| GAAATTCAGATAGATGAGAA+AGG | - | chr7_2:71863377-71863396 | None:intergenic | 30.0% | |
| !!! | ATGAATTTTGAGACCAACAA+TGG | - | chr7_2:71863448-71863467 | None:intergenic | 30.0% |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_2:71863515-71863534 | Msa1074140:CDS | 30.0% |
| AAAAGGACTAATTCAAGATG+AGG | + | chr7_2:71863560-71863579 | Msa1074140:CDS | 30.0% | |
| AATCTCTTTATCTCCATCAT+CGG | + | chr7_2:71863620-71863639 | Msa1074140:CDS | 30.0% | |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_2:71863690-71863709 | None:intergenic | 30.0% |
| !! | TGAGAATTTGCTAGTGAAAA+TGG | + | chr7_2:71863734-71863753 | Msa1074140:CDS | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_2:71863791-71863810 | Msa1074140:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_2:71863900-71863919 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_2:71863975-71863994 | Msa1074140:CDS | 30.0% |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_2:71864070-71864089 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_2:71864069-71864088 | Msa1074140:CDS | 30.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_2:71861926-71861945 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_2:71861951-71861970 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_2:71862097-71862116 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_2:71862189-71862208 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_2:71862231-71862250 | Msa1074140:intron | 30.0% |
| ! | TTCTTAGCTCGAACAATTTT+TGG | + | chr7_2:71862462-71862481 | Msa1074140:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_2:71862670-71862689 | Msa1074140:intron | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_2:71862894-71862913 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_2:71863296-71863315 | Msa1074140:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_2:71863331-71863350 | Msa1074140:CDS | 30.0% | |
| GAAATTCAGATAGATGAGAA+AGG | - | chr7_2:71863377-71863396 | None:intergenic | 30.0% | |
| !!! | ATGAATTTTGAGACCAACAA+TGG | - | chr7_2:71863448-71863467 | None:intergenic | 30.0% |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_2:71863515-71863534 | Msa1074140:CDS | 30.0% |
| AAAAGGACTAATTCAAGATG+AGG | + | chr7_2:71863560-71863579 | Msa1074140:CDS | 30.0% | |
| AATCTCTTTATCTCCATCAT+CGG | + | chr7_2:71863620-71863639 | Msa1074140:CDS | 30.0% | |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_2:71863690-71863709 | None:intergenic | 30.0% |
| !! | TGAGAATTTGCTAGTGAAAA+TGG | + | chr7_2:71863734-71863753 | Msa1074140:CDS | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_2:71863791-71863810 | Msa1074140:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_2:71863900-71863919 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_2:71863975-71863994 | Msa1074140:CDS | 30.0% |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_2:71864070-71864089 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_2:71864069-71864088 | Msa1074140:CDS | 30.0% |
| !! | TTTTGGAAGAAAGTGAGGTT+TGG | - | chr7_2:71861864-71861883 | None:intergenic | 35.0% |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_2:71861932-71861951 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_2:71862060-71862079 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_2:71862077-71862096 | Msa1074140:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_2:71862089-71862108 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_2:71862149-71862168 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_2:71862238-71862257 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_2:71862271-71862290 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_2:71862275-71862294 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_2:71862300-71862319 | Msa1074140:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_2:71862501-71862520 | Msa1074140:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_2:71862610-71862629 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_2:71862611-71862630 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_2:71862636-71862655 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_2:71862644-71862663 | Msa1074140:intron | 35.0% |
| ATCATGGTTGGAACAATTCT+TGG | - | chr7_2:71862725-71862744 | None:intergenic | 35.0% | |
| TAACGAGTTTGAATCATGGT+TGG | - | chr7_2:71862737-71862756 | None:intergenic | 35.0% | |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_2:71862907-71862926 | Msa1074140:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_2:71862911-71862930 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_2:71862936-71862955 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_2:71862937-71862956 | Msa1074140:CDS | 35.0% | |
| TCCTTGAAACGTTATTGTTG+TGG | - | chr7_2:71863017-71863036 | None:intergenic | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_2:71863033-71863052 | Msa1074140:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_2:71863047-71863066 | Msa1074140:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_2:71863083-71863102 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGAAAG+TGG | + | chr7_2:71863094-71863113 | Msa1074140:CDS | 35.0% | |
| AAAGCCCTATACTAGAAAGT+GGG | + | chr7_2:71863095-71863114 | Msa1074140:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_2:71863285-71863304 | None:intergenic | 35.0% | |
| TCTTCGCTAAAATTAATCGG+TGG | - | chr7_2:71863399-71863418 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_2:71863555-71863574 | None:intergenic | 35.0% |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_2:71863693-71863712 | Msa1074140:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_2:71863795-71863814 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_2:71863834-71863853 | Msa1074140:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_2:71863909-71863928 | Msa1074140:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_2:71863919-71863938 | Msa1074140:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_2:71863920-71863939 | Msa1074140:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_2:71863995-71864014 | Msa1074140:CDS | 35.0% | |
| TCGTATAAAGAGCTTTCCTT+AGG | - | chr7_2:71864014-71864033 | None:intergenic | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_2:71864071-71864090 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_2:71864068-71864087 | Msa1074140:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_2:71864072-71864091 | Msa1074140:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_2:71864073-71864092 | Msa1074140:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_2:71864135-71864154 | Msa1074140:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_2:71864174-71864193 | Msa1074140:CDS | 35.0% | |
| !! | TTTTGGAAGAAAGTGAGGTT+TGG | - | chr7_2:71861864-71861883 | None:intergenic | 35.0% |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_2:71861932-71861951 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_2:71862060-71862079 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_2:71862077-71862096 | Msa1074140:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_2:71862089-71862108 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_2:71862149-71862168 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_2:71862238-71862257 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_2:71862271-71862290 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_2:71862275-71862294 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_2:71862300-71862319 | Msa1074140:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_2:71862501-71862520 | Msa1074140:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_2:71862610-71862629 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_2:71862611-71862630 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_2:71862636-71862655 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_2:71862644-71862663 | Msa1074140:intron | 35.0% |
| ATCATGGTTGGAACAATTCT+TGG | - | chr7_2:71862725-71862744 | None:intergenic | 35.0% | |
| TAACGAGTTTGAATCATGGT+TGG | - | chr7_2:71862737-71862756 | None:intergenic | 35.0% | |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_2:71862907-71862926 | Msa1074140:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_2:71862911-71862930 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_2:71862936-71862955 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_2:71862937-71862956 | Msa1074140:CDS | 35.0% | |
| TCCTTGAAACGTTATTGTTG+TGG | - | chr7_2:71863017-71863036 | None:intergenic | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_2:71863033-71863052 | Msa1074140:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_2:71863047-71863066 | Msa1074140:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_2:71863083-71863102 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGAAAG+TGG | + | chr7_2:71863094-71863113 | Msa1074140:CDS | 35.0% | |
| AAAGCCCTATACTAGAAAGT+GGG | + | chr7_2:71863095-71863114 | Msa1074140:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_2:71863285-71863304 | None:intergenic | 35.0% | |
| TCTTCGCTAAAATTAATCGG+TGG | - | chr7_2:71863399-71863418 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_2:71863555-71863574 | None:intergenic | 35.0% |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_2:71863693-71863712 | Msa1074140:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_2:71863795-71863814 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_2:71863834-71863853 | Msa1074140:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_2:71863909-71863928 | Msa1074140:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_2:71863919-71863938 | Msa1074140:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_2:71863920-71863939 | Msa1074140:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_2:71863995-71864014 | Msa1074140:CDS | 35.0% | |
| TCGTATAAAGAGCTTTCCTT+AGG | - | chr7_2:71864014-71864033 | None:intergenic | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_2:71864071-71864090 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_2:71864068-71864087 | Msa1074140:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_2:71864072-71864091 | Msa1074140:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_2:71864073-71864092 | Msa1074140:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_2:71864135-71864154 | Msa1074140:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_2:71864174-71864193 | Msa1074140:CDS | 35.0% | |
| !!! | TGAGGTTTTGGAAGAAAGTG+AGG | - | chr7_2:71861869-71861888 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_2:71861890-71861909 | Msa1074140:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_2:71861896-71861915 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_2:71861897-71861916 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_2:71861903-71861922 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_2:71861923-71861942 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_2:71862052-71862071 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_2:71862258-71862277 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_2:71862258-71862277 | Msa1074140:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_2:71862411-71862430 | Msa1074140:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_2:71862415-71862434 | Msa1074140:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_2:71862416-71862435 | Msa1074140:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_2:71862486-71862505 | Msa1074140:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_2:71862502-71862521 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_2:71862537-71862556 | None:intergenic | 40.0% | |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_2:71862591-71862610 | Msa1074140:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_2:71862622-71862641 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_2:71862682-71862701 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_2:71862741-71862760 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_2:71862986-71863005 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_2:71862999-71863018 | None:intergenic | 40.0% |
| GCCACAACAATAACGTTTCA+AGG | + | chr7_2:71863013-71863032 | Msa1074140:CDS | 40.0% | |
| ! | GTCTCCCACTTTCTAGTATA+GGG | - | chr7_2:71863102-71863121 | None:intergenic | 40.0% |
| ! | TGTCTCCCACTTTCTAGTAT+AGG | - | chr7_2:71863103-71863122 | None:intergenic | 40.0% |
| ACATCACAACCTTGAACACT+AGG | - | chr7_2:71863180-71863199 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_2:71863252-71863271 | Msa1074140:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_2:71863345-71863364 | Msa1074140:CDS | 40.0% |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_2:71863461-71863480 | Msa1074140:CDS | 40.0% | |
| TTTGTTACCTTCCATCAACG+CGG | - | chr7_2:71863490-71863509 | None:intergenic | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_2:71863533-71863552 | None:intergenic | 40.0% |
| AATTTCTTGCACTCCTTGTG+AGG | - | chr7_2:71863655-71863674 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_2:71863674-71863693 | Msa1074140:CDS | 40.0% | |
| TTTGCTAGTGAAAATGGCAG+AGG | + | chr7_2:71863740-71863759 | Msa1074140:CDS | 40.0% | |
| GTGAAAATGGCAGAGGAAAT+TGG | + | chr7_2:71863747-71863766 | Msa1074140:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_2:71863755-71863774 | Msa1074140:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_2:71863843-71863862 | Msa1074140:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_2:71863939-71863958 | Msa1074140:CDS | 40.0% | |
| CTTTCAGGGTCACTCAAAAT+AGG | - | chr7_2:71864056-71864075 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_2:71864141-71864160 | Msa1074140:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_2:71864145-71864164 | None:intergenic | 40.0% |
| !!! | TGAGGTTTTGGAAGAAAGTG+AGG | - | chr7_2:71861869-71861888 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_2:71861890-71861909 | Msa1074140:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_2:71861896-71861915 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_2:71861897-71861916 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_2:71861903-71861922 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_2:71861923-71861942 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_2:71862052-71862071 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_2:71862258-71862277 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_2:71862258-71862277 | Msa1074140:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_2:71862411-71862430 | Msa1074140:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_2:71862415-71862434 | Msa1074140:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_2:71862416-71862435 | Msa1074140:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_2:71862486-71862505 | Msa1074140:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_2:71862502-71862521 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_2:71862537-71862556 | None:intergenic | 40.0% | |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_2:71862591-71862610 | Msa1074140:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_2:71862622-71862641 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_2:71862682-71862701 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_2:71862741-71862760 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_2:71862986-71863005 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_2:71862999-71863018 | None:intergenic | 40.0% |
| GCCACAACAATAACGTTTCA+AGG | + | chr7_2:71863013-71863032 | Msa1074140:CDS | 40.0% | |
| ! | GTCTCCCACTTTCTAGTATA+GGG | - | chr7_2:71863102-71863121 | None:intergenic | 40.0% |
| ! | TGTCTCCCACTTTCTAGTAT+AGG | - | chr7_2:71863103-71863122 | None:intergenic | 40.0% |
| ACATCACAACCTTGAACACT+AGG | - | chr7_2:71863180-71863199 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_2:71863252-71863271 | Msa1074140:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_2:71863345-71863364 | Msa1074140:CDS | 40.0% |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_2:71863461-71863480 | Msa1074140:CDS | 40.0% | |
| TTTGTTACCTTCCATCAACG+CGG | - | chr7_2:71863490-71863509 | None:intergenic | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_2:71863533-71863552 | None:intergenic | 40.0% |
| AATTTCTTGCACTCCTTGTG+AGG | - | chr7_2:71863655-71863674 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_2:71863674-71863693 | Msa1074140:CDS | 40.0% | |
| TTTGCTAGTGAAAATGGCAG+AGG | + | chr7_2:71863740-71863759 | Msa1074140:CDS | 40.0% | |
| GTGAAAATGGCAGAGGAAAT+TGG | + | chr7_2:71863747-71863766 | Msa1074140:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_2:71863755-71863774 | Msa1074140:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_2:71863843-71863862 | Msa1074140:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_2:71863939-71863958 | Msa1074140:CDS | 40.0% | |
| CTTTCAGGGTCACTCAAAAT+AGG | - | chr7_2:71864056-71864075 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_2:71864141-71864160 | Msa1074140:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_2:71864145-71864164 | None:intergenic | 40.0% |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_2:71861881-71861900 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_2:71861907-71861926 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_2:71862420-71862439 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_2:71862429-71862448 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_2:71862432-71862451 | Msa1074140:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_2:71862516-71862535 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_2:71862520-71862539 | Msa1074140:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_2:71862677-71862696 | Msa1074140:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_2:71862683-71862702 | None:intergenic | 45.0% | |
| AAAGTGGGAGACAAGTGTCA+TGG | + | chr7_2:71863110-71863129 | Msa1074140:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_2:71863216-71863235 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_2:71863213-71863232 | Msa1074140:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_2:71863216-71863235 | Msa1074140:CDS | 45.0% |
| TGTTTCCCTGAAGCCATTGT+TGG | + | chr7_2:71863432-71863451 | Msa1074140:CDS | 45.0% | |
| TGAGACCAACAATGGCTTCA+GGG | - | chr7_2:71863440-71863459 | None:intergenic | 45.0% | |
| TTGAGACCAACAATGGCTTC+AGG | - | chr7_2:71863441-71863460 | None:intergenic | 45.0% | |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_2:71863535-71863554 | Msa1074140:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_2:71863543-71863562 | Msa1074140:CDS | 45.0% | |
| ! | AGATGAGGAAAGAGAAGCAC+AGG | + | chr7_2:71863575-71863594 | Msa1074140:CDS | 45.0% |
| GAGGTTTCTGATTCCGATGA+TGG | - | chr7_2:71863636-71863655 | None:intergenic | 45.0% | |
| TCGGAATCAGAAACCTCACA+AGG | + | chr7_2:71863639-71863658 | Msa1074140:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_2:71863969-71863988 | None:intergenic | 45.0% | |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_2:71861881-71861900 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_2:71861907-71861926 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_2:71862420-71862439 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_2:71862429-71862448 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_2:71862432-71862451 | Msa1074140:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_2:71862516-71862535 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_2:71862520-71862539 | Msa1074140:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_2:71862677-71862696 | Msa1074140:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_2:71862683-71862702 | None:intergenic | 45.0% | |
| AAAGTGGGAGACAAGTGTCA+TGG | + | chr7_2:71863110-71863129 | Msa1074140:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_2:71863216-71863235 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_2:71863213-71863232 | Msa1074140:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_2:71863216-71863235 | Msa1074140:CDS | 45.0% |
| TGTTTCCCTGAAGCCATTGT+TGG | + | chr7_2:71863432-71863451 | Msa1074140:CDS | 45.0% | |
| TGAGACCAACAATGGCTTCA+GGG | - | chr7_2:71863440-71863459 | None:intergenic | 45.0% | |
| TTGAGACCAACAATGGCTTC+AGG | - | chr7_2:71863441-71863460 | None:intergenic | 45.0% | |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_2:71863535-71863554 | Msa1074140:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_2:71863543-71863562 | Msa1074140:CDS | 45.0% | |
| ! | AGATGAGGAAAGAGAAGCAC+AGG | + | chr7_2:71863575-71863594 | Msa1074140:CDS | 45.0% |
| GAGGTTTCTGATTCCGATGA+TGG | - | chr7_2:71863636-71863655 | None:intergenic | 45.0% | |
| TCGGAATCAGAAACCTCACA+AGG | + | chr7_2:71863639-71863658 | Msa1074140:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_2:71863969-71863988 | None:intergenic | 45.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_2:71861887-71861906 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_2:71863168-71863187 | Msa1074140:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_2:71863225-71863244 | Msa1074140:CDS | 50.0% | |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_2:71863927-71863946 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_2:71863952-71863971 | Msa1074140:CDS | 50.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_2:71861887-71861906 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_2:71863168-71863187 | Msa1074140:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_2:71863225-71863244 | Msa1074140:CDS | 50.0% | |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_2:71863927-71863946 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_2:71863952-71863971 | Msa1074140:CDS | 50.0% | |
| TTCCATCAACGCGGAGTCCA+CGG | - | chr7_2:71863481-71863500 | None:intergenic | 55.0% | |
| TTCCATCAACGCGGAGTCCA+CGG | - | chr7_2:71863481-71863500 | None:intergenic | 55.0% | |
| ! | GTGGACTCCGCGTTGATGGA+AGG | + | chr7_2:71863480-71863499 | Msa1074140:CDS | 60.0% |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_2:71863960-71863979 | Msa1074140:CDS | 60.0% | |
| ! | GTGGACTCCGCGTTGATGGA+AGG | + | chr7_2:71863480-71863499 | Msa1074140:CDS | 60.0% |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_2:71863960-71863979 | Msa1074140:CDS | 60.0% | |
| AGCCGTGGACTCCGCGTTGA+TGG | + | chr7_2:71863476-71863495 | Msa1074140:CDS | 65.0% | |
| AGCCGTGGACTCCGCGTTGA+TGG | + | chr7_2:71863476-71863495 | Msa1074140:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 71861845 | 71864229 | 71861845 | ID=Msa1074140;Name=Msa1074140 |
| chr7_2 | mRNA | 71861845 | 71864229 | 71861845 | ID=Msa1074140-mRNA-1;Parent=Msa1074140;Name=Msa1074140-mRNA-1;_AED=0.04;_eAED=0.04;_QI=64|1|0.66|1|1|1|3|0|539 |
| chr7_2 | exon | 71861845 | 71862125 | 71861845 | ID=Msa1074140-mRNA-1:exon:16368;Parent=Msa1074140-mRNA-1 |
| chr7_2 | exon | 71862244 | 71862321 | 71862244 | ID=Msa1074140-mRNA-1:exon:16369;Parent=Msa1074140-mRNA-1 |
| chr7_2 | exon | 71862905 | 71864229 | 71862905 | ID=Msa1074140-mRNA-1:exon:16370;Parent=Msa1074140-mRNA-1 |
| chr7_2 | five_prime_UTR | 71861845 | 71861908 | 71861845 | ID=Msa1074140-mRNA-1:five_prime_utr;Parent=Msa1074140-mRNA-1 |
| chr7_2 | CDS | 71861909 | 71862125 | 71861909 | ID=Msa1074140-mRNA-1:cds;Parent=Msa1074140-mRNA-1 |
| chr7_2 | CDS | 71862244 | 71862321 | 71862244 | ID=Msa1074140-mRNA-1:cds;Parent=Msa1074140-mRNA-1 |
| chr7_2 | CDS | 71862905 | 71864229 | 71862905 | ID=Msa1074140-mRNA-1:cds;Parent=Msa1074140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
