Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037130 | XP_013450265.1 | 85.356 | 239 | 5 | 2 | 1 | 209 | 219 | 457 | 8.34e-141 | 411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037130 | sp|Q9SZA4|CDC21_ARATH | 71.849 | 238 | 38 | 1 | 1 | 209 | 220 | 457 | 7.51e-120 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037130 | A0A072U570 | 85.356 | 239 | 5 | 2 | 1 | 209 | 219 | 457 | 3.98e-141 | 411 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1037130 | Msa1077870 | 0.833299 | 5.774412e-56 | -8.615850e-47 |
| Msa1037130 | Msa1123120 | 0.807445 | 5.036522e-50 | -8.615850e-47 |
| Msa1037130 | Msa1421790 | 0.810337 | 1.212209e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037130 | MtrunA17_Chr7g0267961 | 85.356 | 239 | 5 | 2 | 1 | 209 | 219 | 457 | 7.67e-145 | 411 |
| Msa1037130 | MtrunA17_Chr5g0395821 | 70.168 | 238 | 42 | 1 | 1 | 209 | 217 | 454 | 2.42e-121 | 351 |
| Msa1037130 | MtrunA17_Chr3g0098921 | 68.201 | 239 | 46 | 2 | 1 | 209 | 221 | 459 | 1.17e-116 | 339 |
| Msa1037130 | MtrunA17_Chr7g0228191 | 73.214 | 224 | 29 | 2 | 1 | 193 | 106 | 329 | 9.45e-114 | 328 |
| Msa1037130 | MtrunA17_Chr7g0235181 | 69.167 | 240 | 38 | 4 | 1 | 209 | 192 | 426 | 2.31e-112 | 327 |
| Msa1037130 | MtrunA17_Chr7g0233651 | 64.286 | 238 | 47 | 2 | 1 | 209 | 203 | 431 | 2.75e-102 | 302 |
| Msa1037130 | MtrunA17_Chr7g0234591 | 65.417 | 240 | 49 | 3 | 1 | 209 | 200 | 436 | 3.20e-102 | 302 |
| Msa1037130 | MtrunA17_Chr2g0330601 | 65.385 | 208 | 64 | 3 | 4 | 207 | 166 | 369 | 8.15e-88 | 263 |
| Msa1037130 | MtrunA17_Chr3g0111961 | 48.309 | 207 | 84 | 1 | 3 | 186 | 259 | 465 | 7.95e-65 | 207 |
| Msa1037130 | MtrunA17_Chr2g0308501 | 48.148 | 216 | 80 | 4 | 4 | 188 | 99 | 313 | 3.43e-63 | 199 |
| Msa1037130 | MtrunA17_Chr2g0330681 | 58.115 | 191 | 32 | 4 | 4 | 163 | 196 | 369 | 6.90e-62 | 197 |
| Msa1037130 | MtrunA17_Chr4g0057131 | 46.860 | 207 | 87 | 1 | 4 | 187 | 249 | 455 | 2.99e-61 | 198 |
| Msa1037130 | MtrunA17_Chr2g0281451 | 27.429 | 175 | 101 | 5 | 3 | 175 | 97 | 247 | 1.19e-11 | 63.5 |
| Msa1037130 | MtrunA17_Chr4g0026671 | 26.667 | 180 | 119 | 5 | 3 | 182 | 33 | 199 | 8.74e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037130 | AT4G33270.1 | 71.849 | 238 | 38 | 1 | 1 | 209 | 220 | 457 | 7.63e-121 | 350 |
| Msa1037130 | AT4G33260.1 | 71.849 | 238 | 38 | 1 | 1 | 209 | 210 | 447 | 6.52e-116 | 337 |
| Msa1037130 | AT5G27570.1 | 67.083 | 240 | 48 | 3 | 1 | 209 | 211 | 450 | 2.47e-106 | 313 |
| Msa1037130 | AT5G27945.1 | 65.690 | 239 | 52 | 2 | 1 | 209 | 190 | 428 | 2.47e-105 | 310 |
| Msa1037130 | AT4G33260.2 | 69.683 | 221 | 38 | 1 | 1 | 192 | 210 | 430 | 2.77e-105 | 310 |
| Msa1037130 | AT5G27080.1 | 64.583 | 240 | 54 | 3 | 1 | 209 | 203 | 442 | 7.01e-102 | 301 |
| Msa1037130 | AT5G26900.1 | 64.435 | 239 | 55 | 2 | 1 | 209 | 206 | 444 | 9.24e-102 | 301 |
| Msa1037130 | AT5G13840.1 | 48.792 | 207 | 83 | 1 | 3 | 186 | 254 | 460 | 8.38e-66 | 210 |
| Msa1037130 | AT5G13840.2 | 48.792 | 207 | 83 | 1 | 3 | 186 | 254 | 460 | 8.38e-66 | 210 |
| Msa1037130 | AT4G22910.1 | 47.343 | 207 | 86 | 1 | 4 | 187 | 257 | 463 | 3.94e-64 | 206 |
| Msa1037130 | AT4G11920.1 | 44.860 | 214 | 95 | 1 | 4 | 194 | 249 | 462 | 1.13e-61 | 199 |
Find 64 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGAAACTCTTAGATTT+TGG | 0.143277 | 7_1:+73633525 | Msa1037130:CDS |
| GTGGCTTTGCATGCTTCTGC+TGG | 0.230906 | 7_1:-73633563 | None:intergenic |
| CCTTTGGAAGTATCCTTCTA+TGG | 0.254046 | 7_1:+73633415 | Msa1037130:CDS |
| CAGGGTAATCTACTGGCTTC+TGG | 0.309255 | 7_1:+73633236 | Msa1037130:intron |
| GTATCCTTCTATGGTGAAAA+TGG | 0.311467 | 7_1:+73633424 | Msa1037130:CDS |
| AAGGGCTCATTATATGTCTT+TGG | 0.358151 | 7_1:-73633587 | None:intergenic |
| ACGATAATGTTGTTCACATA+TGG | 0.371186 | 7_1:+73633119 | Msa1037130:CDS |
| AATCTACTGGCTTCTGGTGG+AGG | 0.376592 | 7_1:+73633242 | Msa1037130:CDS |
| GTCATCATCTTCAACGAATA+CGG | 0.384451 | 7_1:-73633622 | None:intergenic |
| TTAGTAGCTCACGCTCATTC+TGG | 0.385492 | 7_1:-73633361 | None:intergenic |
| CACTTCGAGGGTGATGTATA+TGG | 0.388915 | 7_1:+73633463 | Msa1037130:CDS |
| TGGCTTTGCATGCTTCTGCT+GGG | 0.422084 | 7_1:-73633562 | None:intergenic |
| CCGAGAACCAGCTTACCCTT+TGG | 0.427049 | 7_1:+73633399 | Msa1037130:CDS |
| CTCACATCGTTGAAACATAC+AGG | 0.428220 | 7_1:+73633029 | Msa1037130:CDS |
| CTACTGGCTTCTGGTGGAGG+TGG | 0.431389 | 7_1:+73633245 | Msa1037130:CDS |
| AACAATCATATTCTGACAAC+AGG | 0.439142 | 7_1:+73632962 | Msa1037130:CDS |
| CTGGCTTCTGGTGGAGGTGG+AGG | 0.440261 | 7_1:+73633248 | Msa1037130:CDS |
| CAAGAGTGGGTTCACTGGCT+TGG | 0.451387 | 7_1:+73632939 | Msa1037130:CDS |
| GATGCCACTGTACACCCATC+TGG | 0.480407 | 7_1:-73633494 | None:intergenic |
| ATCTCAACGGTCACACTTCG+AGG | 0.480528 | 7_1:+73633450 | Msa1037130:CDS |
| CAGAGCAAGAGTGGGTTCAC+TGG | 0.481190 | 7_1:+73632934 | Msa1037130:CDS |
| CCAAAGGGTAAGCTGGTTCT+CGG | 0.481991 | 7_1:-73633399 | None:intergenic |
| TGCAAGTATGTGCTCTGCTA+TGG | 0.485347 | 7_1:+73633336 | Msa1037130:CDS |
| CGATAATGTTGTTCACATAT+GGG | 0.487900 | 7_1:+73633120 | Msa1037130:CDS |
| TGTCCCTCAGGGTAATCTAC+TGG | 0.491265 | 7_1:+73633229 | Msa1037130:intron |
| GGACACAACCAGGAGGTTTG+TGG | 0.497262 | 7_1:+73633052 | Msa1037130:CDS |
| GATACTTCCAAAGGGTAAGC+TGG | 0.503616 | 7_1:-73633406 | None:intergenic |
| GACACAACCAGGAGGTTTGT+GGG | 0.510860 | 7_1:+73633053 | Msa1037130:CDS |
| AACATACAGGGGACACAACC+AGG | 0.511067 | 7_1:+73633042 | Msa1037130:CDS |
| CTCATTATATGTCTTTGGTG+TGG | 0.516280 | 7_1:-73633582 | None:intergenic |
| TATTCTGACAACAGGAGGAA+TGG | 0.524698 | 7_1:+73632970 | Msa1037130:CDS |
| GGGCTCAAGTGGTCACCCTC+AGG | 0.528586 | 7_1:+73633073 | Msa1037130:CDS |
| AGGAGGTTTGTGGGCTCAAG+TGG | 0.528883 | 7_1:+73633062 | Msa1037130:CDS |
| ACTTGAGCCCACAAACCTCC+TGG | 0.538177 | 7_1:-73633060 | None:intergenic |
| TCATCATCTTCAACGAATAC+GGG | 0.547121 | 7_1:-73633621 | None:intergenic |
| GGGTGGACACAGAGCAAGAG+TGG | 0.549117 | 7_1:+73632925 | Msa1037130:CDS |
| AGATTGAATTCAGTTGACAC+TGG | 0.560409 | 7_1:+73633311 | Msa1037130:CDS |
| GGTAATCTACTGGCTTCTGG+TGG | 0.565300 | 7_1:+73633239 | Msa1037130:CDS |
| TATATGGCGCAAAGTCCAGA+TGG | 0.565373 | 7_1:+73633479 | Msa1037130:CDS |
| CGTGAGCTACTAAGCTCACA+TGG | 0.568122 | 7_1:+73633371 | Msa1037130:CDS |
| CTGACAACAGGAGGAATGGA+TGG | 0.572412 | 7_1:+73632974 | Msa1037130:CDS |
| CATAGAAGGATACTTCCAAA+GGG | 0.584766 | 7_1:-73633414 | None:intergenic |
| TCACATATGGGATAGATCTG+TGG | 0.596581 | 7_1:+73633132 | Msa1037130:CDS |
| GGACAACAATTGTCAAGTGG+TGG | 0.599505 | 7_1:+73633094 | Msa1037130:CDS |
| ATACGGGTGAAATTAGCAAA+GGG | 0.600657 | 7_1:-73633605 | None:intergenic |
| TCTCAACGGTCACACTTCGA+GGG | 0.613321 | 7_1:+73633451 | Msa1037130:CDS |
| GTGAAAATGGCAGATCTCAA+CGG | 0.613838 | 7_1:+73633437 | Msa1037130:CDS |
| AATACGGGTGAAATTAGCAA+AGG | 0.619999 | 7_1:-73633606 | None:intergenic |
| CAGCTAAGGGCAATGAAGGG+TGG | 0.622963 | 7_1:+73632908 | None:intergenic |
| CCATAGAAGGATACTTCCAA+AGG | 0.623454 | 7_1:-73633415 | None:intergenic |
| AAGCTGTGGAACACACACAC+TGG | 0.630912 | 7_1:+73633284 | Msa1037130:CDS |
| GTGATCATTGCATTAAGCTG+TGG | 0.635919 | 7_1:+73633270 | Msa1037130:CDS |
| AATCATATTCTGACAACAGG+AGG | 0.641326 | 7_1:+73632965 | Msa1037130:CDS |
| ACTTGACAATTGTTGTCCTG+AGG | 0.654097 | 7_1:-73633089 | None:intergenic |
| TCACATCGTTGAAACATACA+GGG | 0.656486 | 7_1:+73633030 | Msa1037130:CDS |
| CTTGACAATTGTTGTCCTGA+GGG | 0.657303 | 7_1:-73633088 | None:intergenic |
| TCAGGACAACAATTGTCAAG+TGG | 0.664718 | 7_1:+73633091 | Msa1037130:CDS |
| TGGGTGTACAGTGGCATCTG+CGG | 0.666837 | 7_1:+73633499 | Msa1037130:CDS |
| CTGCAGCTAAGGGCAATGAA+GGG | 0.668716 | 7_1:+73632905 | None:intergenic |
| GGTGGACACAGAGCAAGAGT+GGG | 0.681424 | 7_1:+73632926 | Msa1037130:CDS |
| AAGTCCAGATGGGTGTACAG+TGG | 0.686450 | 7_1:+73633490 | Msa1037130:CDS |
| ATATGGCGCAAAGTCCAGAT+GGG | 0.692355 | 7_1:+73633480 | Msa1037130:CDS |
| CACATCGTTGAAACATACAG+GGG | 0.758385 | 7_1:+73633031 | Msa1037130:CDS |
| ATACAGGGGACACAACCAGG+AGG | 0.774768 | 7_1:+73633045 | Msa1037130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTGGAATGTCTTT+GGG | + | chr7_1:73633537-73633556 | Msa1037130:CDS | 25.0% |
| AACAATCATATTCTGACAAC+AGG | + | chr7_1:73632962-73632981 | Msa1037130:CDS | 30.0% | |
| ACGATAATGTTGTTCACATA+TGG | + | chr7_1:73633119-73633138 | Msa1037130:CDS | 30.0% | |
| CGATAATGTTGTTCACATAT+GGG | + | chr7_1:73633120-73633139 | Msa1037130:CDS | 30.0% | |
| ! | CAGATGAAACTCTTAGATTT+TGG | + | chr7_1:73633525-73633544 | Msa1037130:CDS | 30.0% |
| !!! | CTTAGATTTTGGAATGTCTT+TGG | + | chr7_1:73633536-73633555 | Msa1037130:CDS | 30.0% |
| AATCATATTCTGACAACAGG+AGG | + | chr7_1:73632965-73632984 | Msa1037130:CDS | 35.0% | |
| TCACATCGTTGAAACATACA+GGG | + | chr7_1:73633030-73633049 | Msa1037130:CDS | 35.0% | |
| AGATTGAATTCAGTTGACAC+TGG | + | chr7_1:73633311-73633330 | Msa1037130:CDS | 35.0% | |
| CATAGAAGGATACTTCCAAA+GGG | - | chr7_1:73633417-73633436 | None:intergenic | 35.0% | |
| GTATCCTTCTATGGTGAAAA+TGG | + | chr7_1:73633424-73633443 | Msa1037130:CDS | 35.0% | |
| CTCATTATATGTCTTTGGTG+TGG | - | chr7_1:73633585-73633604 | None:intergenic | 35.0% | |
| AAGGGCTCATTATATGTCTT+TGG | - | chr7_1:73633590-73633609 | None:intergenic | 35.0% | |
| ATACGGGTGAAATTAGCAAA+GGG | - | chr7_1:73633608-73633627 | None:intergenic | 35.0% | |
| AATACGGGTGAAATTAGCAA+AGG | - | chr7_1:73633609-73633628 | None:intergenic | 35.0% | |
| TATTCTGACAACAGGAGGAA+TGG | + | chr7_1:73632970-73632989 | Msa1037130:CDS | 40.0% | |
| CTCACATCGTTGAAACATAC+AGG | + | chr7_1:73633029-73633048 | Msa1037130:CDS | 40.0% | |
| CACATCGTTGAAACATACAG+GGG | + | chr7_1:73633031-73633050 | Msa1037130:CDS | 40.0% | |
| CTTGACAATTGTTGTCCTGA+GGG | - | chr7_1:73633091-73633110 | None:intergenic | 40.0% | |
| ACTTGACAATTGTTGTCCTG+AGG | - | chr7_1:73633092-73633111 | None:intergenic | 40.0% | |
| TCAGGACAACAATTGTCAAG+TGG | + | chr7_1:73633091-73633110 | Msa1037130:CDS | 40.0% | |
| TCACATATGGGATAGATCTG+TGG | + | chr7_1:73633132-73633151 | Msa1037130:CDS | 40.0% | |
| GTGATCATTGCATTAAGCTG+TGG | + | chr7_1:73633270-73633289 | Msa1037130:CDS | 40.0% | |
| CCATAGAAGGATACTTCCAA+AGG | - | chr7_1:73633418-73633437 | None:intergenic | 40.0% | |
| !! | CCTTTGGAAGTATCCTTCTA+TGG | + | chr7_1:73633415-73633434 | Msa1037130:CDS | 40.0% |
| !!! | TCTGCCATTTTCACCATAGA+AGG | - | chr7_1:73633431-73633450 | None:intergenic | 40.0% |
| GTGAAAATGGCAGATCTCAA+CGG | + | chr7_1:73633437-73633456 | Msa1037130:CDS | 40.0% | |
| GGACAACAATTGTCAAGTGG+TGG | + | chr7_1:73633094-73633113 | Msa1037130:CDS | 45.0% | |
| CTTCAAATTCACCTACCCGA+TGG | + | chr7_1:73633158-73633177 | Msa1037130:intron | 45.0% | |
| AAGCCAGTAGATTACCCTGA+GGG | - | chr7_1:73633235-73633254 | None:intergenic | 45.0% | |
| TGCAAGTATGTGCTCTGCTA+TGG | + | chr7_1:73633336-73633355 | Msa1037130:CDS | 45.0% | |
| TTAGTAGCTCACGCTCATTC+TGG | - | chr7_1:73633364-73633383 | None:intergenic | 45.0% | |
| GATACTTCCAAAGGGTAAGC+TGG | - | chr7_1:73633409-73633428 | None:intergenic | 45.0% | |
| CACTTCGAGGGTGATGTATA+TGG | + | chr7_1:73633463-73633482 | Msa1037130:CDS | 45.0% | |
| TATATGGCGCAAAGTCCAGA+TGG | + | chr7_1:73633479-73633498 | Msa1037130:CDS | 45.0% | |
| ATATGGCGCAAAGTCCAGAT+GGG | + | chr7_1:73633480-73633499 | Msa1037130:CDS | 45.0% | |
| CTGACAACAGGAGGAATGGA+TGG | + | chr7_1:73632974-73632993 | Msa1037130:CDS | 50.0% | |
| AACATACAGGGGACACAACC+AGG | + | chr7_1:73633042-73633061 | Msa1037130:CDS | 50.0% | |
| GACACAACCAGGAGGTTTGT+GGG | + | chr7_1:73633053-73633072 | Msa1037130:CDS | 50.0% | |
| CTCAAACCTGTGAAGCCATC+GGG | - | chr7_1:73633176-73633195 | None:intergenic | 50.0% | |
| CCTCAAACCTGTGAAGCCAT+CGG | - | chr7_1:73633177-73633196 | None:intergenic | 50.0% | |
| GGAACACATAGCTGCTGTGA+AGG | + | chr7_1:73633195-73633214 | Msa1037130:intron | 50.0% | |
| TGTCCCTCAGGGTAATCTAC+TGG | + | chr7_1:73633229-73633248 | Msa1037130:intron | 50.0% | |
| GAAGCCAGTAGATTACCCTG+AGG | - | chr7_1:73633236-73633255 | None:intergenic | 50.0% | |
| !! | CAGGGTAATCTACTGGCTTC+TGG | + | chr7_1:73633236-73633255 | Msa1037130:intron | 50.0% |
| !! | GGTAATCTACTGGCTTCTGG+TGG | + | chr7_1:73633239-73633258 | Msa1037130:CDS | 50.0% |
| !! | AATCTACTGGCTTCTGGTGG+AGG | + | chr7_1:73633242-73633261 | Msa1037130:CDS | 50.0% |
| AAGCTGTGGAACACACACAC+TGG | + | chr7_1:73633284-73633303 | Msa1037130:CDS | 50.0% | |
| CGTGAGCTACTAAGCTCACA+TGG | + | chr7_1:73633371-73633390 | Msa1037130:CDS | 50.0% | |
| ! | CCAAAGGGTAAGCTGGTTCT+CGG | - | chr7_1:73633402-73633421 | None:intergenic | 50.0% |
| ATCTCAACGGTCACACTTCG+AGG | + | chr7_1:73633450-73633469 | Msa1037130:CDS | 50.0% | |
| TCTCAACGGTCACACTTCGA+GGG | + | chr7_1:73633451-73633470 | Msa1037130:CDS | 50.0% | |
| AAGTCCAGATGGGTGTACAG+TGG | + | chr7_1:73633490-73633509 | Msa1037130:CDS | 50.0% | |
| ! | TGGCTTTGCATGCTTCTGCT+GGG | - | chr7_1:73633565-73633584 | None:intergenic | 50.0% |
| GGTGGACACAGAGCAAGAGT+GGG | + | chr7_1:73632926-73632945 | Msa1037130:CDS | 55.0% | |
| ! | CAGAGCAAGAGTGGGTTCAC+TGG | + | chr7_1:73632934-73632953 | Msa1037130:CDS | 55.0% |
| ! | CAAGAGTGGGTTCACTGGCT+TGG | + | chr7_1:73632939-73632958 | Msa1037130:CDS | 55.0% |
| ATACAGGGGACACAACCAGG+AGG | + | chr7_1:73633045-73633064 | Msa1037130:CDS | 55.0% | |
| GGACACAACCAGGAGGTTTG+TGG | + | chr7_1:73633052-73633071 | Msa1037130:CDS | 55.0% | |
| ACTTGAGCCCACAAACCTCC+TGG | - | chr7_1:73633063-73633082 | None:intergenic | 55.0% | |
| AGGAGGTTTGTGGGCTCAAG+TGG | + | chr7_1:73633062-73633081 | Msa1037130:CDS | 55.0% | |
| AACCTGTGAAGCCATCGGGT+AGG | - | chr7_1:73633172-73633191 | None:intergenic | 55.0% | |
| CCGATGGCTTCACAGGTTTG+AGG | + | chr7_1:73633174-73633193 | Msa1037130:intron | 55.0% | |
| ! | CATAGCTGCTGTGAAGGCAC+TGG | + | chr7_1:73633201-73633220 | Msa1037130:intron | 55.0% |
| CCGAGAACCAGCTTACCCTT+TGG | + | chr7_1:73633399-73633418 | Msa1037130:CDS | 55.0% | |
| GATGCCACTGTACACCCATC+TGG | - | chr7_1:73633497-73633516 | None:intergenic | 55.0% | |
| TGGGTGTACAGTGGCATCTG+CGG | + | chr7_1:73633499-73633518 | Msa1037130:CDS | 55.0% | |
| ! | GTGGCTTTGCATGCTTCTGC+TGG | - | chr7_1:73633566-73633585 | None:intergenic | 55.0% |
| GGGTGGACACAGAGCAAGAG+TGG | + | chr7_1:73632925-73632944 | Msa1037130:CDS | 60.0% | |
| CACCTACCCGATGGCTTCAC+AGG | + | chr7_1:73633167-73633186 | Msa1037130:intron | 60.0% | |
| !! | CTGCTGTGAAGGCACTGGCT+TGG | + | chr7_1:73633206-73633225 | Msa1037130:intron | 60.0% |
| !! | CACTGGCTTGGTGTCCCTCA+GGG | + | chr7_1:73633218-73633237 | Msa1037130:intron | 60.0% |
| !! | CTACTGGCTTCTGGTGGAGG+TGG | + | chr7_1:73633245-73633264 | Msa1037130:CDS | 60.0% |
| GGGCTCAAGTGGTCACCCTC+AGG | + | chr7_1:73633073-73633092 | Msa1037130:CDS | 65.0% | |
| !! | GCACTGGCTTGGTGTCCCTC+AGG | + | chr7_1:73633217-73633236 | Msa1037130:intron | 65.0% |
| CTGGCTTCTGGTGGAGGTGG+AGG | + | chr7_1:73633248-73633267 | Msa1037130:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73632920 | 73633634 | 73632920 | ID=Msa1037130;Name=Msa1037130 |
| chr7_1 | mRNA | 73632920 | 73633634 | 73632920 | ID=Msa1037130-mRNA-1;Parent=Msa1037130;Name=Msa1037130-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|209 |
| chr7_1 | exon | 73632920 | 73633153 | 73632920 | ID=Msa1037130-mRNA-1:exon:18172;Parent=Msa1037130-mRNA-1 |
| chr7_1 | exon | 73633239 | 73633634 | 73633239 | ID=Msa1037130-mRNA-1:exon:18173;Parent=Msa1037130-mRNA-1 |
| chr7_1 | CDS | 73632920 | 73633153 | 73632920 | ID=Msa1037130-mRNA-1:cds;Parent=Msa1037130-mRNA-1 |
| chr7_1 | CDS | 73633239 | 73633634 | 73633239 | ID=Msa1037130-mRNA-1:cds;Parent=Msa1037130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
