Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039260 | XP_003626275.1 | 91.779 | 888 | 22 | 4 | 1 | 839 | 1 | 886 | 0.0 | 1634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039260 | sp|Q8S9K3|VAR3_ARATH | 33.660 | 306 | 157 | 8 | 128 | 428 | 93 | 357 | 4.96e-35 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039260 | G7KYM5 | 91.779 | 888 | 22 | 4 | 1 | 839 | 1 | 886 | 0.0 | 1634 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054480 | Msa1039260 | 0.800396 | 1.469712e-48 | -8.615850e-47 |
| Msa0070700 | Msa1039260 | 0.804138 | 2.494285e-49 | -8.615850e-47 |
| Msa0139350 | Msa1039260 | 0.818582 | 1.817926e-52 | -8.615850e-47 |
| Msa1039260 | Msa1128570 | 0.832465 | 9.310037e-56 | -8.615850e-47 |
| Msa1039260 | Msa1174470 | 0.804354 | 2.248705e-49 | -8.615850e-47 |
| Msa1039260 | Msa1263750 | 0.814083 | 1.845958e-51 | -8.615850e-47 |
| Msa1039260 | Msa1263790 | 0.808803 | 2.588431e-50 | -8.615850e-47 |
| Msa1039260 | Msa1266990 | 0.805966 | 1.033900e-49 | -8.615850e-47 |
| Msa1039260 | Msa1411750 | 0.812005 | 5.269425e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039260 | MtrunA17_Chr7g0272741 | 91.779 | 888 | 22 | 4 | 1 | 839 | 1 | 886 | 0.0 | 1634 |
| Msa1039260 | MtrunA17_Chr1g0161121 | 38.806 | 335 | 126 | 8 | 122 | 406 | 59 | 364 | 1.29e-65 | 228 |
| Msa1039260 | MtrunA17_Chr6g0478341 | 39.116 | 294 | 145 | 8 | 124 | 406 | 104 | 374 | 3.68e-52 | 190 |
| Msa1039260 | MtrunA17_Chr6g0478341 | 47.222 | 72 | 34 | 2 | 333 | 402 | 374 | 443 | 1.83e-15 | 80.1 |
| Msa1039260 | MtrunA17_Chr6g0478341 | 38.889 | 90 | 34 | 2 | 327 | 404 | 410 | 490 | 1.75e-11 | 67.8 |
| Msa1039260 | MtrunA17_Chr7g0254331 | 34.615 | 286 | 135 | 9 | 125 | 406 | 78 | 315 | 1.05e-39 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039260 | AT1G55040.1 | 52.239 | 737 | 271 | 20 | 6 | 703 | 5 | 699 | 0.0 | 616 |
| Msa1039260 | AT1G70650.1 | 34.648 | 355 | 161 | 7 | 125 | 441 | 44 | 365 | 1.89e-59 | 210 |
| Msa1039260 | AT1G70650.2 | 33.333 | 363 | 155 | 7 | 125 | 441 | 44 | 365 | 3.01e-52 | 192 |
| Msa1039260 | AT1G48570.1 | 37.059 | 340 | 147 | 11 | 125 | 419 | 60 | 377 | 4.84e-51 | 186 |
| Msa1039260 | AT1G48570.1 | 51.351 | 74 | 36 | 0 | 333 | 406 | 364 | 437 | 2.49e-17 | 86.3 |
| Msa1039260 | AT5G17790.1 | 33.660 | 306 | 157 | 8 | 128 | 428 | 93 | 357 | 5.04e-36 | 146 |
Find 212 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAAATGGTGCATGATTT+AGG | 0.123405 | 7_1:+76402153 | Msa1039260:CDS |
| AAACAGGTTGTTCGGGAATT+TGG | 0.177849 | 7_1:-76401933 | None:intergenic |
| CTTGGGTTTGATCCTATTAA+TGG | 0.181047 | 7_1:+76403151 | Msa1039260:CDS |
| AGAACCAAAGCTTAATTTCT+TGG | 0.211002 | 7_1:-76404713 | None:intergenic |
| CATGCTGCTTGTCTTAATTT+CGG | 0.227175 | 7_1:+76402240 | Msa1039260:CDS |
| GAGAAGAAGGTTTAGGGTTT+GGG | 0.230724 | 7_1:-76401792 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7_1:-76405002 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7_1:-76405086 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7_1:-76405170 | None:intergenic |
| AAGGTTTAGGGTTTGGGTTT+TGG | 0.252849 | 7_1:-76401786 | None:intergenic |
| GCAGAGAGAGAAGAAGGTTT+AGG | 0.258649 | 7_1:-76401799 | None:intergenic |
| ATCACTGGAGGAGGGAGATT+TGG | 0.276652 | 7_1:-76403277 | None:intergenic |
| AGAATCTGCATATTCAAAAT+TGG | 0.286698 | 7_1:-76404194 | None:intergenic |
| AATAAAAGTAAAACAGCTTC+TGG | 0.290479 | 7_1:+76404529 | Msa1039260:CDS |
| ATAAAATGGTGCATGATTTA+GGG | 0.298769 | 7_1:+76402154 | Msa1039260:CDS |
| CAGAGAGAGAAGAAGGTTTA+GGG | 0.303482 | 7_1:-76401798 | None:intergenic |
| AAATCATCAAACCCTGTTCT+AGG | 0.305189 | 7_1:-76404352 | None:intergenic |
| AAGGCAGGATATTCAAGTTT+TGG | 0.313249 | 7_1:+76402529 | Msa1039260:CDS |
| AGAGAAGAAGGTTTAGGGTT+TGG | 0.323448 | 7_1:-76401793 | None:intergenic |
| AAAGGGAACAGACATGATTC+TGG | 0.325410 | 7_1:+76404817 | Msa1039260:CDS |
| GACCTCTGCCTTTCCTTCTC+TGG | 0.332244 | 7_1:-76404687 | None:intergenic |
| TATTCATCCAGGCAAAATAA+AGG | 0.336980 | 7_1:+76404799 | Msa1039260:CDS |
| GAGGAAGGATGAAGATAAAA+TGG | 0.341906 | 7_1:+76402140 | Msa1039260:CDS |
| ACCACCTTTCTGTCCACATT+GGG | 0.346893 | 7_1:-76402566 | None:intergenic |
| TCCCGTCCAACACGTCTCTT+TGG | 0.350726 | 7_1:-76403340 | None:intergenic |
| CCCAAGAGACAGTTGCTTCC+AGG | 0.351064 | 7_1:+76403803 | Msa1039260:CDS |
| GACGAAGATGTTGTTGTTGT+TGG | 0.352381 | 7_1:-76401979 | None:intergenic |
| ATGCTGCTTGTCTTAATTTC+GGG | 0.354542 | 7_1:+76402241 | Msa1039260:CDS |
| TAACAGCCAACCTGTGGAAT+TGG | 0.356893 | 7_1:+76402029 | Msa1039260:CDS |
| TCATCATCCCGGAAATCTTA+TGG | 0.357332 | 7_1:+76405078 | Msa1039260:CDS |
| TCGTCATCCCGGAAATCTTA+TGG | 0.358923 | 7_1:+76405162 | Msa1039260:CDS |
| GGATCATCCCGGAAATCTTA+TGG | 0.366429 | 7_1:+76404994 | Msa1039260:CDS |
| GGAGGAGGTTGTTTCACCTT+TGG | 0.369295 | 7_1:-76403313 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7_1:-76405001 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7_1:-76405085 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7_1:-76405169 | None:intergenic |
| GGAGGGAGATTTGGATCAAT+AGG | 0.378515 | 7_1:-76403268 | None:intergenic |
| GATTCAATTGATGGAGAGAT+TGG | 0.383239 | 7_1:+76402092 | Msa1039260:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7_1:+76405014 | Msa1039260:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7_1:+76405098 | Msa1039260:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7_1:+76405182 | Msa1039260:CDS |
| ACGCCCACCTGATGAATTCC+TGG | 0.384843 | 7_1:+76404045 | Msa1039260:CDS |
| AGCTTCCATTCTTGAACTAC+TGG | 0.385556 | 7_1:-76404425 | None:intergenic |
| CTCTTCAACGAATTCGTGCT+TGG | 0.388472 | 7_1:+76401887 | Msa1039260:CDS |
| GGAGGTTGTTTCACCTTTGG+TGG | 0.390138 | 7_1:-76403310 | None:intergenic |
| CTGCCCATCTTATTAAAGTT+AGG | 0.390467 | 7_1:-76404103 | None:intergenic |
| ATAATCAAGTTCATCTTCCT+TGG | 0.394846 | 7_1:-76404602 | None:intergenic |
| TAGAAATGCTAGAGGGTCTC+AGG | 0.395388 | 7_1:+76404933 | Msa1039260:CDS |
| TCCTGGAAGCAACTGTCTCT+TGG | 0.396449 | 7_1:-76403804 | None:intergenic |
| AGGACTGATGATCCATTAAT+AGG | 0.396782 | 7_1:-76403163 | None:intergenic |
| TGGACCTAACTTTAATAAGA+TGG | 0.398446 | 7_1:+76404099 | Msa1039260:CDS |
| GTCATCAAAGTCAAAATTCC+AGG | 0.409210 | 7_1:-76404146 | None:intergenic |
| AGGGTTTAAGAGGCGGCGTT+TGG | 0.411053 | 7_1:-76401734 | None:intergenic |
| TGTATTCTTGCGAACTGAAC+GGG | 0.412398 | 7_1:-76404566 | None:intergenic |
| GATTCTGAAACAGGTTGTTC+GGG | 0.413379 | 7_1:-76401940 | None:intergenic |
| TGATTCTGAAACAGGTTGTT+CGG | 0.413387 | 7_1:-76401941 | None:intergenic |
| AGAAGGAACTTTACTAAAGA+TGG | 0.415912 | 7_1:+76404841 | Msa1039260:CDS |
| CCTGGAAGCAACTGTCTCTT+GGG | 0.416125 | 7_1:-76403803 | None:intergenic |
| TTTACTAAAGATGGAAAGTC+TGG | 0.419164 | 7_1:+76404850 | Msa1039260:CDS |
| GACAGTTGCTTCCAGGAGAA+TGG | 0.419362 | 7_1:+76403810 | Msa1039260:CDS |
| AACCCTGTTCTAGGTCTAGA+AGG | 0.422985 | 7_1:-76404343 | None:intergenic |
| CCAACCAAGAAATTAAGCTT+TGG | 0.427354 | 7_1:+76404709 | Msa1039260:CDS |
| TCCATCAATTGAATCCATTC+CGG | 0.429098 | 7_1:-76402084 | None:intergenic |
| GTCTTAATTTCGGGAAGGAC+CGG | 0.437259 | 7_1:+76402250 | Msa1039260:CDS |
| CCAAAGCTTAATTTCTTGGT+TGG | 0.439853 | 7_1:-76404709 | None:intergenic |
| GAAGTAACCGTGATCGGAAT+CGG | 0.440402 | 7_1:+76405121 | Msa1039260:CDS |
| ACAGTTTAATAAATACAGTA+TGG | 0.440806 | 7_1:+76405278 | Msa1039260:CDS |
| GGTGGTGGTGATTCTGAAAC+AGG | 0.440996 | 7_1:-76401949 | None:intergenic |
| GCCGGAATGGATTCAATTGA+TGG | 0.444180 | 7_1:+76402083 | Msa1039260:CDS |
| AAGTTGAGAAATGGAAGAAT+GGG | 0.451734 | 7_1:-76401762 | None:intergenic |
| GGGATGATGTTGAGATGAAA+AGG | 0.451787 | 7_1:+76403359 | Msa1039260:CDS |
| GGCAAGAGGTTTCCAATGCC+TGG | 0.456231 | 7_1:+76404128 | Msa1039260:CDS |
| ATTCATCCAGGCAAAATAAA+GGG | 0.459718 | 7_1:+76404800 | Msa1039260:CDS |
| GTTGTTGTTGGTGATGGTGG+TGG | 0.460900 | 7_1:-76401967 | None:intergenic |
| TTGTGCATCCGTGGCCGGAA+TGG | 0.462193 | 7_1:+76402070 | Msa1039260:CDS |
| CAATGCTCGGCGTGTGGGAT+GGG | 0.465625 | 7_1:+76404249 | Msa1039260:CDS |
| TCGGTACATTCCCATTCTCC+TGG | 0.465682 | 7_1:-76403821 | None:intergenic |
| TCTGACGAAGATGGCAGTGC+TGG | 0.465695 | 7_1:+76404739 | Msa1039260:CDS |
| CAACTGTCTCTTGGGACGCT+TGG | 0.467805 | 7_1:-76403795 | None:intergenic |
| GGTTGTTTCACCTTTGGTGG+AGG | 0.468414 | 7_1:-76403307 | None:intergenic |
| GTTGTTGGTGATGGTGGTGG+TGG | 0.468976 | 7_1:-76401964 | None:intergenic |
| GTTGTTGTTGTTGGTGATGG+TGG | 0.472841 | 7_1:-76401970 | None:intergenic |
| TCTGAGATTGTACATGTTGA+AGG | 0.473425 | 7_1:+76402186 | Msa1039260:CDS |
| GATGTTGTTGTTGTTGGTGA+TGG | 0.474773 | 7_1:-76401973 | None:intergenic |
| GGTTCTGACTCTGACGAAGA+TGG | 0.475635 | 7_1:+76404730 | Msa1039260:CDS |
| AAAGTCAAAATTCCAGGCAT+TGG | 0.477506 | 7_1:-76404140 | None:intergenic |
| TTTAAGGAAGCTTGTCCACC+TGG | 0.477767 | 7_1:+76402604 | Msa1039260:CDS |
| ATGCGAATGCTACTGACACT+TGG | 0.481025 | 7_1:+76403133 | Msa1039260:CDS |
| ACAGTTGCTTCCAGGAGAAT+GGG | 0.481216 | 7_1:+76403811 | Msa1039260:CDS |
| GAAGTTGAGAAATGGAAGAA+TGG | 0.484391 | 7_1:-76401763 | None:intergenic |
| ACAATGCTCGGCGTGTGGGA+TGG | 0.486410 | 7_1:+76404248 | Msa1039260:CDS |
| TTCAGAAACAGAAGACACTT+TGG | 0.488449 | 7_1:+76404462 | Msa1039260:CDS |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7_1:-76405044 | None:intergenic |
| TAAATACAGTATGGATGAGA+AGG | 0.490347 | 7_1:+76405287 | Msa1039260:CDS |
| TAGCATTTCTATAAGACTGC+CGG | 0.493085 | 7_1:-76404921 | None:intergenic |
| ACAGACTTCTGCTTCAAAAG+TGG | 0.494941 | 7_1:-76403193 | None:intergenic |
| GGACCTAACTTTAATAAGAT+GGG | 0.495914 | 7_1:+76404100 | Msa1039260:CDS |
| TATGAGCTAGAAACTGAAAC+AGG | 0.496805 | 7_1:+76404400 | Msa1039260:CDS |
| GGTCCTTCTAGACCTAGAAC+AGG | 0.497216 | 7_1:+76404340 | Msa1039260:CDS |
| GAATATGTTAATGCCGGTCC+CGG | 0.498620 | 7_1:+76404319 | Msa1039260:CDS |
| GGCTACAAATCAAACATGTT+CGG | 0.500236 | 7_1:+76404877 | Msa1039260:CDS |
| ACAATTGTTTCTCAAGCTGC+AGG | 0.501134 | 7_1:-76403056 | None:intergenic |
| TCTTCACCAATTCCACAGGT+TGG | 0.501674 | 7_1:-76402035 | None:intergenic |
| GGAATTTGTGCATCCGTGGC+CGG | 0.502110 | 7_1:+76402065 | Msa1039260:CDS |
| TTTCAGGTCGTTGTCAAGGC+AGG | 0.503511 | 7_1:+76402514 | Msa1039260:intron |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7_1:+76405037 | Msa1039260:CDS |
| AGGAACCAGTAGTTCAAGAA+TGG | 0.504785 | 7_1:+76404420 | Msa1039260:CDS |
| AGCATTTCTATAAGACTGCC+GGG | 0.507044 | 7_1:-76404920 | None:intergenic |
| GTAGGCAGAAATTTGATGAC+AGG | 0.508546 | 7_1:+76405241 | Msa1039260:CDS |
| TTCAAAACGACAATGGCGTT+CGG | 0.508901 | 7_1:+76401691 | None:intergenic |
| AAGGGAACAGACATGATTCT+GGG | 0.508952 | 7_1:+76404818 | Msa1039260:CDS |
| AATTGAATCCATTCCGGCCA+CGG | 0.511781 | 7_1:-76402078 | None:intergenic |
| CATCAAACCGATTCCGATCA+CGG | 0.512179 | 7_1:-76405128 | None:intergenic |
| AAGCTTGTCCACCTGGATGA+AGG | 0.515198 | 7_1:+76402611 | Msa1039260:CDS |
| GGATGATGTTGAGATGAAAA+GGG | 0.519453 | 7_1:+76403360 | Msa1039260:CDS |
| TCCAAAGAGACGTGTTGGAC+GGG | 0.520056 | 7_1:+76403339 | Msa1039260:CDS |
| TTTGAATATGCAGATTCTCA+TGG | 0.520470 | 7_1:+76404199 | Msa1039260:CDS |
| TGTTCTAGGTCTAGAAGGAC+CGG | 0.521263 | 7_1:-76404338 | None:intergenic |
| TATTCGTCATCGTGGGACCC+TGG | 0.522679 | 7_1:-76404301 | None:intergenic |
| GTCGGAAGAGATTTGATGAC+CGG | 0.525426 | 7_1:+76405217 | Msa1039260:CDS |
| TCTTTCTTCACCAATTCCAC+AGG | 0.527330 | 7_1:-76402039 | None:intergenic |
| CACTTACATCTCCTTCATCC+AGG | 0.527939 | 7_1:-76402622 | None:intergenic |
| AGACGAGCAGAGAGAGAAGA+AGG | 0.529212 | 7_1:-76401805 | None:intergenic |
| CTGAGATTGTACATGTTGAA+GGG | 0.531941 | 7_1:+76402187 | Msa1039260:CDS |
| GCTTCAAAAGTGGCTTGTTG+AGG | 0.532551 | 7_1:-76403183 | None:intergenic |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7_1:+76405031 | Msa1039260:CDS |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7_1:+76405115 | Msa1039260:CDS |
| TTTCTGCTGCCGACCAGAGA+AGG | 0.538950 | 7_1:+76404674 | Msa1039260:CDS |
| AGGTCTAGAAGGACCGGGAC+CGG | 0.544783 | 7_1:-76404332 | None:intergenic |
| ATTCGTCATCGTGGGACCCT+GGG | 0.546845 | 7_1:-76404300 | None:intergenic |
| AAACAGAAGACACTTTGGAC+TGG | 0.550608 | 7_1:+76404467 | Msa1039260:CDS |
| AACCACCTTTCTGTCCACAT+TGG | 0.551275 | 7_1:-76402567 | None:intergenic |
| CTCCAAAGAGACGTGTTGGA+CGG | 0.552538 | 7_1:+76403338 | Msa1039260:CDS |
| TTTCTTCAGATAACAATGCT+CGG | 0.552686 | 7_1:+76404236 | Msa1039260:CDS |
| CATCAAACCTCTTCTTATCA+CGG | 0.553176 | 7_1:-76404963 | None:intergenic |
| GATGACAGGGAGCACGGCAG+AGG | 0.560359 | 7_1:+76405255 | Msa1039260:CDS |
| CGTCTCTTTGGAGTAGGAGG+AGG | 0.560622 | 7_1:-76403328 | None:intergenic |
| TAAATGAGGCATATTCATCC+AGG | 0.563376 | 7_1:+76404788 | Msa1039260:CDS |
| CATACCTCAACAAATCAAAC+CGG | 0.566974 | 7_1:-76402269 | None:intergenic |
| AAATACAGTATGGATGAGAA+GGG | 0.567899 | 7_1:+76405288 | Msa1039260:CDS |
| TACATCTTTCTCTCGATCCA+AGG | 0.570204 | 7_1:+76404585 | Msa1039260:CDS |
| TGCGAATGCTACTGACACTT+GGG | 0.570349 | 7_1:+76403134 | Msa1039260:CDS |
| CATCAAATTTCTGCCTACTC+CGG | 0.570481 | 7_1:-76405236 | None:intergenic |
| AGATAACAATGCTCGGCGTG+TGG | 0.570534 | 7_1:+76404243 | Msa1039260:CDS |
| GACCAGAGAAGGAAAGGCAG+AGG | 0.570783 | 7_1:+76404685 | Msa1039260:CDS |
| GATAACAATGCTCGGCGTGT+GGG | 0.570985 | 7_1:+76404244 | Msa1039260:CDS |
| ATGTATTCTTGCGAACTGAA+CGG | 0.571403 | 7_1:-76404567 | None:intergenic |
| GCAACTTCTTGAATTACAGA+AGG | 0.571871 | 7_1:+76403993 | Msa1039260:CDS |
| CCAACACGTCTCTTTGGAGT+AGG | 0.575104 | 7_1:-76403334 | None:intergenic |
| TGCTTGTCTTAATTTCGGGA+AGG | 0.576196 | 7_1:+76402245 | Msa1039260:CDS |
| TGAAGATGATGACTTAAATG+AGG | 0.578584 | 7_1:+76404774 | Msa1039260:CDS |
| CTCAGGGAAGTAACCGTGGT+CGG | 0.578926 | 7_1:+76405199 | Msa1039260:CDS |
| CATCAAATCTCTTCCGACCA+CGG | 0.580891 | 7_1:-76405212 | None:intergenic |
| TCTGGTCGGCAGCAGAAACA+TGG | 0.585007 | 7_1:-76404669 | None:intergenic |
| AAATTTGATGACAGGGAGCA+CGG | 0.585765 | 7_1:+76405249 | Msa1039260:CDS |
| TTGATTTCAGGTCGTTGTCA+AGG | 0.588495 | 7_1:+76402510 | Msa1039260:intron |
| AGGACCGGTTTGATTTGTTG+AGG | 0.591868 | 7_1:+76402265 | Msa1039260:CDS |
| AGGTGGAATTTGTGCATCCG+TGG | 0.592128 | 7_1:+76402061 | Msa1039260:CDS |
| AAAGATGGAAAGTCTGGTGG+TGG | 0.592319 | 7_1:+76404856 | Msa1039260:CDS |
| TCTGCCTTTCCTTCTCTGGT+CGG | 0.592904 | 7_1:-76404683 | None:intergenic |
| TAAGATGGGCAGTCGGCAAG+AGG | 0.595204 | 7_1:+76404114 | Msa1039260:CDS |
| AACAGAAGACACTTTGGACT+GGG | 0.596911 | 7_1:+76404468 | Msa1039260:CDS |
| ACACGTCTCTTTGGAGTAGG+AGG | 0.598857 | 7_1:-76403331 | None:intergenic |
| CCTACTCCAAAGAGACGTGT+TGG | 0.599442 | 7_1:+76403334 | Msa1039260:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7_1:+76405015 | Msa1039260:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7_1:+76405099 | Msa1039260:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7_1:+76405183 | Msa1039260:CDS |
| CTTGAATTACAGAAGGAATG+TGG | 0.602047 | 7_1:+76404000 | Msa1039260:CDS |
| AGAGATTTGATGACCGGAGT+AGG | 0.602050 | 7_1:+76405223 | Msa1039260:CDS |
| TAAAATTAACAGCCAACCTG+TGG | 0.604873 | 7_1:+76402023 | Msa1039260:CDS |
| GCTGCCGACCAGAGAAGGAA+AGG | 0.607141 | 7_1:+76404679 | Msa1039260:CDS |
| GAAGTAACCGTGATAAGAAG+AGG | 0.607183 | 7_1:+76404956 | Msa1039260:CDS |
| AGAAATGCTAGAGGGTCTCA+GGG | 0.608421 | 7_1:+76404934 | Msa1039260:CDS |
| ACAGACATGATTCTGGGAGA+AGG | 0.609668 | 7_1:+76404824 | Msa1039260:CDS |
| TTTCCAGGAATTCATCAGGT+GGG | 0.615174 | 7_1:-76404048 | None:intergenic |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7_1:+76405007 | Msa1039260:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7_1:+76405091 | Msa1039260:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7_1:+76405175 | Msa1039260:CDS |
| ATGCCCCAATGTGGACAGAA+AGG | 0.622449 | 7_1:+76402562 | Msa1039260:CDS |
| CATTAACATATTCGTCATCG+TGG | 0.624458 | 7_1:-76404309 | None:intergenic |
| GATGATGTTGAGATGAAAAG+GGG | 0.632277 | 7_1:+76403361 | Msa1039260:CDS |
| ACTAAAGATGGAAAGTCTGG+TGG | 0.633614 | 7_1:+76404853 | Msa1039260:CDS |
| ACTTTAATAAGATGGGCAGT+CGG | 0.636668 | 7_1:+76404107 | Msa1039260:CDS |
| CCCCAATGTGGACAGAAAGG+TGG | 0.638533 | 7_1:+76402565 | Msa1039260:CDS |
| GCAGAAGTCTGTTAAAGCAG+TGG | 0.639008 | 7_1:+76403204 | Msa1039260:CDS |
| AGTTGAGAAATGGAAGAATG+GGG | 0.640454 | 7_1:-76401761 | None:intergenic |
| CCACCTTTCTGTCCACATTG+GGG | 0.641456 | 7_1:-76402565 | None:intergenic |
| TAGGCAGAAATTTGATGACA+GGG | 0.644055 | 7_1:+76405242 | Msa1039260:CDS |
| ATTAACATATTCGTCATCGT+GGG | 0.644202 | 7_1:-76404308 | None:intergenic |
| CAAACAAAGAGGACGAGGCA+CGG | 0.646878 | 7_1:+76403098 | Msa1039260:CDS |
| TGTGGAATTGGTGAAGAAAG+AGG | 0.646891 | 7_1:+76402041 | Msa1039260:CDS |
| GTTCTAGGTCTAGAAGGACC+GGG | 0.647939 | 7_1:-76404337 | None:intergenic |
| TTATCTGCTTACAAACAAAG+AGG | 0.648918 | 7_1:+76403087 | Msa1039260:CDS |
| CAGTCTTATAGAAATGCTAG+AGG | 0.651109 | 7_1:+76404925 | Msa1039260:CDS |
| TTTGATGACAATGAATCAGA+TGG | 0.653290 | 7_1:+76404160 | Msa1039260:CDS |
| TGATGTTGAGATGAAAAGGG+GGG | 0.656571 | 7_1:+76403363 | Msa1039260:CDS |
| GATGACGAATATGTTAATGC+CGG | 0.658800 | 7_1:+76404313 | Msa1039260:CDS |
| GCTTACAAACAAAGAGGACG+AGG | 0.663787 | 7_1:+76403093 | Msa1039260:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7_1:+76405006 | Msa1039260:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7_1:+76405090 | Msa1039260:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7_1:+76405174 | Msa1039260:CDS |
| CGAAGAATAGGAGCGTCCCA+GGG | 0.664768 | 7_1:+76404284 | Msa1039260:CDS |
| GTCCTTCTAGACCTAGAACA+GGG | 0.666093 | 7_1:+76404341 | Msa1039260:CDS |
| TACAGTATGGATGAGAAGGG+TGG | 0.669176 | 7_1:+76405291 | Msa1039260:CDS |
| ATGATGTTGAGATGAAAAGG+GGG | 0.672376 | 7_1:+76403362 | Msa1039260:CDS |
| AGATTCTCATGGTATAGACA+AGG | 0.676876 | 7_1:+76404210 | Msa1039260:CDS |
| ATTATGATTCTGATGAACAG+CGG | 0.679445 | 7_1:+76404620 | Msa1039260:CDS |
| AGTCTTATAGAAATGCTAGA+GGG | 0.683962 | 7_1:+76404926 | Msa1039260:CDS |
| TTACATCTCCTTCATCCAGG+TGG | 0.684945 | 7_1:-76402619 | None:intergenic |
| GCATTTCTATAAGACTGCCG+GGG | 0.703378 | 7_1:-76404919 | None:intergenic |
| GGGTCTCAGGGAAGTAACCG+TGG | 0.707185 | 7_1:+76405195 | Msa1039260:CDS |
| GGAATTGGTGAAGAAAGAGG+TGG | 0.708417 | 7_1:+76402044 | Msa1039260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGGTTATGAGTATTTT+TGG | - | chr7_1:76401920-76401939 | None:intergenic | 20.0% |
| !!! | ATCAGAATTATTTTGATCAT+AGG | + | chr7_1:76402118-76402137 | Msa1039260:CDS | 20.0% |
| !!! | TAACTAAGTTGAATTCATTT+TGG | + | chr7_1:76402303-76402322 | Msa1039260:intron | 20.0% |
| !!! | TTATTGTTCTGTTTTACATA+TGG | + | chr7_1:76402422-76402441 | Msa1039260:intron | 20.0% |
| !!! | TATTGTTCTGTTTTACATAT+GGG | + | chr7_1:76402423-76402442 | Msa1039260:intron | 20.0% |
| !! | ATAATGAGAAAAATATGCTT+CGG | - | chr7_1:76402988-76403007 | None:intergenic | 20.0% |
| !! | TACAAAAATTCATTGATATC+AGG | + | chr7_1:76403024-76403043 | Msa1039260:intron | 20.0% |
| !! | TAGCAAAATCTAACAATATT+TGG | - | chr7_1:76403931-76403950 | None:intergenic | 20.0% |
| !!! | TGAGTTGTTTATTTTTTATC+TGG | + | chr7_1:76403965-76403984 | Msa1039260:intron | 20.0% |
| !! | ACAGTTTAATAAATACAGTA+TGG | + | chr7_1:76405278-76405297 | Msa1039260:CDS | 20.0% |
| !!! | AGAATTATTTTGATCATAGG+AGG | + | chr7_1:76402121-76402140 | Msa1039260:CDS | 25.0% |
| ! | ATAAAATGGTGCATGATTTA+GGG | + | chr7_1:76402154-76402173 | Msa1039260:CDS | 25.0% |
| !!! | ATTTTGGTTGTTGAATTTGT+TGG | + | chr7_1:76402319-76402338 | Msa1039260:intron | 25.0% |
| !!! | TTTTGGTTGTTGAATTTGTT+GGG | + | chr7_1:76402320-76402339 | Msa1039260:intron | 25.0% |
| ! | AGAGTAACATAATGATATTG+TGG | + | chr7_1:76402396-76402415 | Msa1039260:intron | 25.0% |
| !! | ATTGTTCTGTTTTACATATG+GGG | + | chr7_1:76402424-76402443 | Msa1039260:intron | 25.0% |
| !! | ATGAATGATTGATTGATTTC+AGG | + | chr7_1:76402498-76402517 | Msa1039260:intron | 25.0% |
| !!! | TTTTCTCTGGAAAACTTTTA+AGG | + | chr7_1:76402588-76402607 | Msa1039260:CDS | 25.0% |
| !!! | AAGTTGATTCATTGTTGTTT+TGG | + | chr7_1:76402693-76402712 | Msa1039260:intron | 25.0% |
| ! | TCATTACTTGTGAATTGTAA+TGG | - | chr7_1:76402746-76402765 | None:intergenic | 25.0% |
| ! | ACAATTCACAAGTAATGAAT+AGG | + | chr7_1:76402748-76402767 | Msa1039260:intron | 25.0% |
| ! | TAATGAGAAAAATATGCTTC+GGG | - | chr7_1:76402987-76403006 | None:intergenic | 25.0% |
| ! | GTGTAGCAAACATAATAAAT+TGG | - | chr7_1:76403520-76403539 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTGTTTCTCCTTT+TGG | + | chr7_1:76403608-76403627 | Msa1039260:intron | 25.0% |
| ! | GTATATCATTAACTACCAAA+AGG | - | chr7_1:76403626-76403645 | None:intergenic | 25.0% |
| ! | TATACTATTAGACGTCAAAT+TGG | + | chr7_1:76403641-76403660 | Msa1039260:intron | 25.0% |
| !! | TAAATGGACTTAAACTTACT+CGG | - | chr7_1:76403843-76403862 | None:intergenic | 25.0% |
| ! | TTTAAGTCCATTTAATGTTC+TGG | + | chr7_1:76403849-76403868 | Msa1039260:intron | 25.0% |
| ! | TTAAGTCCATTTAATGTTCT+GGG | + | chr7_1:76403850-76403869 | Msa1039260:intron | 25.0% |
| !!! | GACATGATTTGTTTTTATCT+GGG | - | chr7_1:76403906-76403925 | None:intergenic | 25.0% |
| !!! | TGACATGATTTGTTTTTATC+TGG | - | chr7_1:76403907-76403926 | None:intergenic | 25.0% |
| !!! | TTGTTTATTTTTTATCTGGC+AGG | + | chr7_1:76403969-76403988 | Msa1039260:intron | 25.0% |
| !!! | TATCTTGAGTTTTATTTTCC+AGG | - | chr7_1:76404066-76404085 | None:intergenic | 25.0% |
| ! | AGAATCTGCATATTCAAAAT+TGG | - | chr7_1:76404197-76404216 | None:intergenic | 25.0% |
| ! | AATAAAAGTAAAACAGCTTC+TGG | + | chr7_1:76404529-76404548 | Msa1039260:CDS | 25.0% |
| AAGTTGAGAAATGGAAGAAT+GGG | - | chr7_1:76401765-76401784 | None:intergenic | 30.0% | |
| ! | TTGAAGAGTTTCGTGTTTTT+GGG | - | chr7_1:76401875-76401894 | None:intergenic | 30.0% |
| !!! | TTATTTTGATCATAGGAGGA+AGG | + | chr7_1:76402125-76402144 | Msa1039260:CDS | 30.0% |
| GATAAAATGGTGCATGATTT+AGG | + | chr7_1:76402153-76402172 | Msa1039260:CDS | 30.0% | |
| !! | TGAAGGGTTTGATTTTACTA+AGG | + | chr7_1:76402203-76402222 | Msa1039260:CDS | 30.0% |
| ! | TTGTTCTGTTTTACATATGG+GGG | + | chr7_1:76402425-76402444 | Msa1039260:intron | 30.0% |
| !!! | ATTCAAGTTTTGGTTGGTTT+TGG | + | chr7_1:76402539-76402558 | Msa1039260:CDS | 30.0% |
| !! | AGGAATTTTGTTTGAGATGA+TGG | + | chr7_1:76402768-76402787 | Msa1039260:intron | 30.0% |
| !! | CAAGTGTCTATATTTGTTGT+CGG | + | chr7_1:76402833-76402852 | Msa1039260:intron | 30.0% |
| AGAACAATCAAATCAATCTC+AGG | - | chr7_1:76402869-76402888 | None:intergenic | 30.0% | |
| !! | TGAGATTGATTTGATTGTTC+TGG | + | chr7_1:76402868-76402887 | Msa1039260:intron | 30.0% |
| ATAAGAAAGATCGCAAAAGA+GGG | - | chr7_1:76402947-76402966 | None:intergenic | 30.0% | |
| AATAAGAAAGATCGCAAAAG+AGG | - | chr7_1:76402948-76402967 | None:intergenic | 30.0% | |
| ! | CTTTTGCGATCTTTCTTATT+TGG | + | chr7_1:76402948-76402967 | Msa1039260:intron | 30.0% |
| TTATCTGCTTACAAACAAAG+AGG | + | chr7_1:76403087-76403106 | Msa1039260:CDS | 30.0% | |
| ATTTAGCATCTTCAGTTAAG+AGG | - | chr7_1:76403716-76403735 | None:intergenic | 30.0% | |
| ! | GAAGATGCTAAATACTTTTC+AGG | + | chr7_1:76403723-76403742 | Msa1039260:intron | 30.0% |
| TAAGTCCATTTAATGTTCTG+GGG | + | chr7_1:76403851-76403870 | Msa1039260:intron | 30.0% | |
| !!! | TGATTTGTTTTTATCTGGGA+GGG | - | chr7_1:76403902-76403921 | None:intergenic | 30.0% |
| !!! | ATGATTTGTTTTTATCTGGG+AGG | - | chr7_1:76403903-76403922 | None:intergenic | 30.0% |
| ! | TTATTTTCCAGGAATTCATC+AGG | - | chr7_1:76404055-76404074 | None:intergenic | 30.0% |
| ! | CAAGATAAAAAGTACAGTTC+TGG | + | chr7_1:76404079-76404098 | Msa1039260:CDS | 30.0% |
| TGGACCTAACTTTAATAAGA+TGG | + | chr7_1:76404099-76404118 | Msa1039260:CDS | 30.0% | |
| GGACCTAACTTTAATAAGAT+GGG | + | chr7_1:76404100-76404119 | Msa1039260:CDS | 30.0% | |
| ! | TTTGATGACAATGAATCAGA+TGG | + | chr7_1:76404160-76404179 | Msa1039260:CDS | 30.0% |
| TTTGAATATGCAGATTCTCA+TGG | + | chr7_1:76404199-76404218 | Msa1039260:CDS | 30.0% | |
| TTTCTTCAGATAACAATGCT+CGG | + | chr7_1:76404236-76404255 | Msa1039260:CDS | 30.0% | |
| ! | AAGATGATTTTGCGAAGAAT+AGG | + | chr7_1:76404272-76404291 | Msa1039260:CDS | 30.0% |
| ATTAACATATTCGTCATCGT+GGG | - | chr7_1:76404311-76404330 | None:intergenic | 30.0% | |
| ATAATCAAGTTCATCTTCCT+TGG | - | chr7_1:76404605-76404624 | None:intergenic | 30.0% | |
| ATTATGATTCTGATGAACAG+CGG | + | chr7_1:76404620-76404639 | Msa1039260:CDS | 30.0% | |
| AGAACCAAAGCTTAATTTCT+TGG | - | chr7_1:76404716-76404735 | None:intergenic | 30.0% | |
| TGAAGATGATGACTTAAATG+AGG | + | chr7_1:76404774-76404793 | Msa1039260:CDS | 30.0% | |
| TATTCATCCAGGCAAAATAA+AGG | + | chr7_1:76404799-76404818 | Msa1039260:CDS | 30.0% | |
| ATTCATCCAGGCAAAATAAA+GGG | + | chr7_1:76404800-76404819 | Msa1039260:CDS | 30.0% | |
| AGAAGGAACTTTACTAAAGA+TGG | + | chr7_1:76404841-76404860 | Msa1039260:CDS | 30.0% | |
| TTTACTAAAGATGGAAAGTC+TGG | + | chr7_1:76404850-76404869 | Msa1039260:CDS | 30.0% | |
| ! | AGTCTTATAGAAATGCTAGA+GGG | + | chr7_1:76404926-76404945 | Msa1039260:CDS | 30.0% |
| !! | AAGAGGTTTGATGATTTTGA+TGG | + | chr7_1:76404973-76404992 | Msa1039260:CDS | 30.0% |
| TGTCATTACCATAAGATTTC+CGG | - | chr7_1:76405005-76405024 | None:intergenic | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7_1:76405006-76405025 | Msa1039260:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7_1:76405007-76405026 | Msa1039260:CDS | 30.0% |
| TGTCATTACCATAAGATTTC+CGG | - | chr7_1:76405005-76405024 | None:intergenic | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7_1:76405006-76405025 | Msa1039260:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7_1:76405007-76405026 | Msa1039260:CDS | 30.0% |
| !!! | AATCGGTTTGATGATTTTGA+TGG | + | chr7_1:76405138-76405157 | Msa1039260:CDS | 30.0% |
| TGTCATTACCATAAGATTTC+CGG | - | chr7_1:76405005-76405024 | None:intergenic | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7_1:76405006-76405025 | Msa1039260:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7_1:76405007-76405026 | Msa1039260:CDS | 30.0% |
| TAAATACAGTATGGATGAGA+AGG | + | chr7_1:76405287-76405306 | Msa1039260:CDS | 30.0% | |
| AAATACAGTATGGATGAGAA+GGG | + | chr7_1:76405288-76405307 | Msa1039260:CDS | 30.0% | |
| ! | AATGGAAGAATGGGGTTTTA+GGG | - | chr7_1:76401756-76401775 | None:intergenic | 35.0% |
| ! | AAATGGAAGAATGGGGTTTT+AGG | - | chr7_1:76401757-76401776 | None:intergenic | 35.0% |
| AGTTGAGAAATGGAAGAATG+GGG | - | chr7_1:76401764-76401783 | None:intergenic | 35.0% | |
| GAAGTTGAGAAATGGAAGAA+TGG | - | chr7_1:76401766-76401785 | None:intergenic | 35.0% | |
| ! | GTTGAAGAGTTTCGTGTTTT+TGG | - | chr7_1:76401876-76401895 | None:intergenic | 35.0% |
| !! | TGATTCTGAAACAGGTTGTT+CGG | - | chr7_1:76401944-76401963 | None:intergenic | 35.0% |
| TAAAATTAACAGCCAACCTG+TGG | + | chr7_1:76402023-76402042 | Msa1039260:CDS | 35.0% | |
| TCCATCAATTGAATCCATTC+CGG | - | chr7_1:76402087-76402106 | None:intergenic | 35.0% | |
| GATTCAATTGATGGAGAGAT+TGG | + | chr7_1:76402092-76402111 | Msa1039260:CDS | 35.0% | |
| GAGGAAGGATGAAGATAAAA+TGG | + | chr7_1:76402140-76402159 | Msa1039260:CDS | 35.0% | |
| ! | TCTGAGATTGTACATGTTGA+AGG | + | chr7_1:76402186-76402205 | Msa1039260:CDS | 35.0% |
| CTGAGATTGTACATGTTGAA+GGG | + | chr7_1:76402187-76402206 | Msa1039260:CDS | 35.0% | |
| ! | CATGCTGCTTGTCTTAATTT+CGG | + | chr7_1:76402240-76402259 | Msa1039260:CDS | 35.0% |
| ! | ATGCTGCTTGTCTTAATTTC+GGG | + | chr7_1:76402241-76402260 | Msa1039260:CDS | 35.0% |
| CATACCTCAACAAATCAAAC+CGG | - | chr7_1:76402272-76402291 | None:intergenic | 35.0% | |
| !! | GTTTGATTTGTTGAGGTATG+TGG | + | chr7_1:76402272-76402291 | Msa1039260:intron | 35.0% |
| !! | AAGGCAGGATATTCAAGTTT+TGG | + | chr7_1:76402529-76402548 | Msa1039260:CDS | 35.0% |
| !! | CAGGATATTCAAGTTTTGGT+TGG | + | chr7_1:76402533-76402552 | Msa1039260:CDS | 35.0% |
| !!! | TAATTGTTTTGAGCACCGAA+CGG | - | chr7_1:76402659-76402678 | None:intergenic | 35.0% |
| ! | CGAGTGAGATAATGGTAAAA+AGG | - | chr7_1:76402897-76402916 | None:intergenic | 35.0% |
| TAAGAAAGATCGCAAAAGAG+GGG | - | chr7_1:76402946-76402965 | None:intergenic | 35.0% | |
| !! | CGATCTTTCTTATTTGGTGT+TGG | + | chr7_1:76402954-76402973 | Msa1039260:intron | 35.0% |
| CTTGGGTTTGATCCTATTAA+TGG | + | chr7_1:76403151-76403170 | Msa1039260:CDS | 35.0% | |
| AGGACTGATGATCCATTAAT+AGG | - | chr7_1:76403166-76403185 | None:intergenic | 35.0% | |
| GGATGATGTTGAGATGAAAA+GGG | + | chr7_1:76403360-76403379 | Msa1039260:CDS | 35.0% | |
| GATGATGTTGAGATGAAAAG+GGG | + | chr7_1:76403361-76403380 | Msa1039260:CDS | 35.0% | |
| ATGATGTTGAGATGAAAAGG+GGG | + | chr7_1:76403362-76403381 | Msa1039260:CDS | 35.0% | |
| AGTAAATCACAGAGATTCCA+AGG | - | chr7_1:76403411-76403430 | None:intergenic | 35.0% | |
| ! | ATTATGTTTGCTACACCATG+TGG | + | chr7_1:76403524-76403543 | Msa1039260:intron | 35.0% |
| TCAACCAAAAAAAGTTCACC+TGG | - | chr7_1:76403551-76403570 | None:intergenic | 35.0% | |
| TGTAACCCCAGAACATTAAA+TGG | - | chr7_1:76403859-76403878 | None:intergenic | 35.0% | |
| !!! | GATTTGTTTTTATCTGGGAG+GGG | - | chr7_1:76403901-76403920 | None:intergenic | 35.0% |
| GCAACTTCTTGAATTACAGA+AGG | + | chr7_1:76403993-76404012 | Msa1039260:CDS | 35.0% | |
| CTTGAATTACAGAAGGAATG+TGG | + | chr7_1:76404000-76404019 | Msa1039260:CDS | 35.0% | |
| CTGCCCATCTTATTAAAGTT+AGG | - | chr7_1:76404106-76404125 | None:intergenic | 35.0% | |
| ACTTTAATAAGATGGGCAGT+CGG | + | chr7_1:76404107-76404126 | Msa1039260:CDS | 35.0% | |
| AAAGTCAAAATTCCAGGCAT+TGG | - | chr7_1:76404143-76404162 | None:intergenic | 35.0% | |
| GTCATCAAAGTCAAAATTCC+AGG | - | chr7_1:76404149-76404168 | None:intergenic | 35.0% | |
| AGATTCTCATGGTATAGACA+AGG | + | chr7_1:76404210-76404229 | Msa1039260:CDS | 35.0% | |
| CATTAACATATTCGTCATCG+TGG | - | chr7_1:76404312-76404331 | None:intergenic | 35.0% | |
| GATGACGAATATGTTAATGC+CGG | + | chr7_1:76404313-76404332 | Msa1039260:CDS | 35.0% | |
| AAATCATCAAACCCTGTTCT+AGG | - | chr7_1:76404355-76404374 | None:intergenic | 35.0% | |
| !! | AACAGGGTTTGATGATTTTG+AGG | + | chr7_1:76404357-76404376 | Msa1039260:CDS | 35.0% |
| !! | GTTTGATGATTTTGAGGAAG+AGG | + | chr7_1:76404363-76404382 | Msa1039260:CDS | 35.0% |
| TATGAGCTAGAAACTGAAAC+AGG | + | chr7_1:76404400-76404419 | Msa1039260:CDS | 35.0% | |
| TTCAGAAACAGAAGACACTT+TGG | + | chr7_1:76404462-76404481 | Msa1039260:CDS | 35.0% | |
| ATGTATTCTTGCGAACTGAA+CGG | - | chr7_1:76404570-76404589 | None:intergenic | 35.0% | |
| CCAAAGCTTAATTTCTTGGT+TGG | - | chr7_1:76404712-76404731 | None:intergenic | 35.0% | |
| CCAACCAAGAAATTAAGCTT+TGG | + | chr7_1:76404709-76404728 | Msa1039260:CDS | 35.0% | |
| TAAATGAGGCATATTCATCC+AGG | + | chr7_1:76404788-76404807 | Msa1039260:CDS | 35.0% | |
| GGCTACAAATCAAACATGTT+CGG | + | chr7_1:76404877-76404896 | Msa1039260:CDS | 35.0% | |
| TAGCATTTCTATAAGACTGC+CGG | - | chr7_1:76404924-76404943 | None:intergenic | 35.0% | |
| ! | CAGTCTTATAGAAATGCTAG+AGG | + | chr7_1:76404925-76404944 | Msa1039260:CDS | 35.0% |
| CATCAAACCTCTTCTTATCA+CGG | - | chr7_1:76404966-76404985 | None:intergenic | 35.0% | |
| !! | ATGATTTTGATGGATCATCC+CGG | + | chr7_1:76404983-76405002 | Msa1039260:CDS | 35.0% |
| GTCATTACCATAAGATTTCC+GGG | - | chr7_1:76405004-76405023 | None:intergenic | 35.0% | |
| !! | AAGCGGTTTGATGATTTTGA+TGG | + | chr7_1:76405054-76405073 | Msa1039260:CDS | 35.0% |
| !! | ATTTTGATGGATCATCATCC+CGG | + | chr7_1:76405067-76405086 | Msa1039260:CDS | 35.0% |
| GTCATTACCATAAGATTTCC+GGG | - | chr7_1:76405004-76405023 | None:intergenic | 35.0% | |
| GTCATTACCATAAGATTTCC+GGG | - | chr7_1:76405004-76405023 | None:intergenic | 35.0% | |
| ! | TAGGCAGAAATTTGATGACA+GGG | + | chr7_1:76405242-76405261 | Msa1039260:CDS | 35.0% |
| !! | GCAGTGATTTTAGAAACAGT+AGG | + | chr7_1:76405313-76405332 | Msa1039260:CDS | 35.0% |
| !!! | ATGGGGTTTTAGGGTTTAAG+AGG | - | chr7_1:76401747-76401766 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGAAGTTGAGAAA+TGG | - | chr7_1:76401774-76401793 | None:intergenic | 40.0% |
| !! | AGGTTTAGGGTTTGGGTTTT+GGG | - | chr7_1:76401788-76401807 | None:intergenic | 40.0% |
| !! | AAGGTTTAGGGTTTGGGTTT+TGG | - | chr7_1:76401789-76401808 | None:intergenic | 40.0% |
| ! | GAGAAGAAGGTTTAGGGTTT+GGG | - | chr7_1:76401795-76401814 | None:intergenic | 40.0% |
| ! | AGAGAAGAAGGTTTAGGGTT+TGG | - | chr7_1:76401796-76401815 | None:intergenic | 40.0% |
| CAGAGAGAGAAGAAGGTTTA+GGG | - | chr7_1:76401801-76401820 | None:intergenic | 40.0% | |
| AAACAGGTTGTTCGGGAATT+TGG | - | chr7_1:76401936-76401955 | None:intergenic | 40.0% | |
| !! | GATTCTGAAACAGGTTGTTC+GGG | - | chr7_1:76401943-76401962 | None:intergenic | 40.0% |
| ! | GATGTTGTTGTTGTTGGTGA+TGG | - | chr7_1:76401976-76401995 | None:intergenic | 40.0% |
| ! | GACGAAGATGTTGTTGTTGT+TGG | - | chr7_1:76401982-76402001 | None:intergenic | 40.0% |
| TCTTTCTTCACCAATTCCAC+AGG | - | chr7_1:76402042-76402061 | None:intergenic | 40.0% | |
| TGTGGAATTGGTGAAGAAAG+AGG | + | chr7_1:76402041-76402060 | Msa1039260:CDS | 40.0% | |
| TGCTTGTCTTAATTTCGGGA+AGG | + | chr7_1:76402245-76402264 | Msa1039260:CDS | 40.0% | |
| ! | TTGATTTCAGGTCGTTGTCA+AGG | + | chr7_1:76402510-76402529 | Msa1039260:intron | 40.0% |
| !! | TTGTTTGAGATGATGGAAGC+CGG | + | chr7_1:76402775-76402794 | Msa1039260:intron | 40.0% |
| GAGACAAGATTCAAATCCTC+CGG | - | chr7_1:76402797-76402816 | None:intergenic | 40.0% | |
| !! | GTGTCTATATTTGTTGTCGG+TGG | + | chr7_1:76402836-76402855 | Msa1039260:intron | 40.0% |
| !! | ATATTTGTTGTCGGTGGCAA+AGG | + | chr7_1:76402842-76402861 | Msa1039260:intron | 40.0% |
| ! | ACAATTGTTTCTCAAGCTGC+AGG | - | chr7_1:76403059-76403078 | None:intergenic | 40.0% |
| ACAGACTTCTGCTTCAAAAG+TGG | - | chr7_1:76403196-76403215 | None:intergenic | 40.0% | |
| GGGATGATGTTGAGATGAAA+AGG | + | chr7_1:76403359-76403378 | Msa1039260:CDS | 40.0% | |
| TGATGTTGAGATGAAAAGGG+GGG | + | chr7_1:76403363-76403382 | Msa1039260:CDS | 40.0% | |
| CTATGTCCAAAGTATGTCCT+TGG | + | chr7_1:76403391-76403410 | Msa1039260:intron | 40.0% | |
| GAGATTCCAAGGACATACTT+TGG | - | chr7_1:76403400-76403419 | None:intergenic | 40.0% | |
| CTAGAACTTGACATGCACTT+TGG | - | chr7_1:76403466-76403485 | None:intergenic | 40.0% | |
| !!! | TGGACCAGGTGAACTTTTTT+TGG | + | chr7_1:76403544-76403563 | Msa1039260:intron | 40.0% |
| TTGGTTGACAAACCACTGAT+AGG | + | chr7_1:76403563-76403582 | Msa1039260:intron | 40.0% | |
| GAATTAACGATGCCTATCAG+TGG | - | chr7_1:76403578-76403597 | None:intergenic | 40.0% | |
| TTTCCAGGAATTCATCAGGT+GGG | - | chr7_1:76404051-76404070 | None:intergenic | 40.0% | |
| ! | TTTTCCAGGAATTCATCAGG+TGG | - | chr7_1:76404052-76404071 | None:intergenic | 40.0% |
| AGGAACCAGTAGTTCAAGAA+TGG | + | chr7_1:76404420-76404439 | Msa1039260:CDS | 40.0% | |
| AGCTTCCATTCTTGAACTAC+TGG | - | chr7_1:76404428-76404447 | None:intergenic | 40.0% | |
| AAACAGAAGACACTTTGGAC+TGG | + | chr7_1:76404467-76404486 | Msa1039260:CDS | 40.0% | |
| AACAGAAGACACTTTGGACT+GGG | + | chr7_1:76404468-76404487 | Msa1039260:CDS | 40.0% | |
| TGTATTCTTGCGAACTGAAC+GGG | - | chr7_1:76404569-76404588 | None:intergenic | 40.0% | |
| TACATCTTTCTCTCGATCCA+AGG | + | chr7_1:76404585-76404604 | Msa1039260:CDS | 40.0% | |
| !!! | TCTGTTCCCTTTATTTTGCC+TGG | - | chr7_1:76404809-76404828 | None:intergenic | 40.0% |
| AAAGGGAACAGACATGATTC+TGG | + | chr7_1:76404817-76404836 | Msa1039260:CDS | 40.0% | |
| AAGGGAACAGACATGATTCT+GGG | + | chr7_1:76404818-76404837 | Msa1039260:CDS | 40.0% | |
| ACTAAAGATGGAAAGTCTGG+TGG | + | chr7_1:76404853-76404872 | Msa1039260:CDS | 40.0% | |
| !! | ATGATTTTGACGAATCACCC+CGG | + | chr7_1:76404902-76404921 | Msa1039260:CDS | 40.0% |
| AGCATTTCTATAAGACTGCC+GGG | - | chr7_1:76404923-76404942 | None:intergenic | 40.0% | |
| GAAGTAACCGTGATAAGAAG+AGG | + | chr7_1:76404956-76404975 | Msa1039260:CDS | 40.0% | |
| TCATCATCCCGGAAATCTTA+TGG | + | chr7_1:76405078-76405097 | Msa1039260:CDS | 40.0% | |
| !! | ATTTTGATGGATCGTCATCC+CGG | + | chr7_1:76405151-76405170 | Msa1039260:CDS | 40.0% |
| CATCAAATTTCTGCCTACTC+CGG | - | chr7_1:76405239-76405258 | None:intergenic | 40.0% | |
| ! | GTAGGCAGAAATTTGATGAC+AGG | + | chr7_1:76405241-76405260 | Msa1039260:CDS | 40.0% |
| ! | AAATTTGATGACAGGGAGCA+CGG | + | chr7_1:76405249-76405268 | Msa1039260:CDS | 40.0% |
| !!! | GGGTTTTAGGGTTTAAGAGG+CGG | - | chr7_1:76401744-76401763 | None:intergenic | 45.0% |
| GCAGAGAGAGAAGAAGGTTT+AGG | - | chr7_1:76401802-76401821 | None:intergenic | 45.0% | |
| CTCTTCAACGAATTCGTGCT+TGG | + | chr7_1:76401887-76401906 | Msa1039260:CDS | 45.0% | |
| !! | GTTGTTGTTGTTGGTGATGG+TGG | - | chr7_1:76401973-76401992 | None:intergenic | 45.0% |
| TAACAGCCAACCTGTGGAAT+TGG | + | chr7_1:76402029-76402048 | Msa1039260:CDS | 45.0% | |
| TCTTCACCAATTCCACAGGT+TGG | - | chr7_1:76402038-76402057 | None:intergenic | 45.0% | |
| GGAATTGGTGAAGAAAGAGG+TGG | + | chr7_1:76402044-76402063 | Msa1039260:CDS | 45.0% | |
| AATTGAATCCATTCCGGCCA+CGG | - | chr7_1:76402081-76402100 | None:intergenic | 45.0% | |
| ! | GCCGGAATGGATTCAATTGA+TGG | + | chr7_1:76402083-76402102 | Msa1039260:CDS | 45.0% |
| GTCTTAATTTCGGGAAGGAC+CGG | + | chr7_1:76402250-76402269 | Msa1039260:CDS | 45.0% | |
| !! | AGGACCGGTTTGATTTGTTG+AGG | + | chr7_1:76402265-76402284 | Msa1039260:CDS | 45.0% |
| ACCACCTTTCTGTCCACATT+GGG | - | chr7_1:76402569-76402588 | None:intergenic | 45.0% | |
| AACCACCTTTCTGTCCACAT+TGG | - | chr7_1:76402570-76402589 | None:intergenic | 45.0% | |
| ! | GACAGAAAGGTGGTTTTCTC+TGG | + | chr7_1:76402575-76402594 | Msa1039260:CDS | 45.0% |
| TTTAAGGAAGCTTGTCCACC+TGG | + | chr7_1:76402604-76402623 | Msa1039260:CDS | 45.0% | |
| TTACATCTCCTTCATCCAGG+TGG | - | chr7_1:76402622-76402641 | None:intergenic | 45.0% | |
| CACTTACATCTCCTTCATCC+AGG | - | chr7_1:76402625-76402644 | None:intergenic | 45.0% | |
| GACAGATGCGAGTGAGATAA+TGG | - | chr7_1:76402905-76402924 | None:intergenic | 45.0% | |
| GCTTACAAACAAAGAGGACG+AGG | + | chr7_1:76403093-76403112 | Msa1039260:CDS | 45.0% | |
| ATGCGAATGCTACTGACACT+TGG | + | chr7_1:76403133-76403152 | Msa1039260:CDS | 45.0% | |
| TGCGAATGCTACTGACACTT+GGG | + | chr7_1:76403134-76403153 | Msa1039260:CDS | 45.0% | |
| !! | GCTTCAAAAGTGGCTTGTTG+AGG | - | chr7_1:76403186-76403205 | None:intergenic | 45.0% |
| GCAGAAGTCTGTTAAAGCAG+TGG | + | chr7_1:76403204-76403223 | Msa1039260:CDS | 45.0% | |
| GGAGGGAGATTTGGATCAAT+AGG | - | chr7_1:76403271-76403290 | None:intergenic | 45.0% | |
| ! | GCTTTTTGATCACTGGAGGA+GGG | - | chr7_1:76403288-76403307 | None:intergenic | 45.0% |
| GATCAAAAAGCCTCCACCAA+AGG | + | chr7_1:76403297-76403316 | Msa1039260:CDS | 45.0% | |
| GAACTTGACATGCACTTTGG+TGG | - | chr7_1:76403463-76403482 | None:intergenic | 45.0% | |
| AAAAGTTCACCTGGTCCACA+TGG | - | chr7_1:76403542-76403561 | None:intergenic | 45.0% | |
| ! | AAGCTGCTTTGAGTAGTGTG+AGG | + | chr7_1:76403674-76403693 | Msa1039260:intron | 45.0% |
| ACAGTTGCTTCCAGGAGAAT+GGG | + | chr7_1:76403811-76403830 | Msa1039260:CDS | 45.0% | |
| !! | TGTTTTTATCTGGGAGGGGA+GGG | - | chr7_1:76403897-76403916 | None:intergenic | 45.0% |
| !!! | TTGTTTTTATCTGGGAGGGG+AGG | - | chr7_1:76403898-76403917 | None:intergenic | 45.0% |
| GAATATGTTAATGCCGGTCC+CGG | + | chr7_1:76404319-76404338 | Msa1039260:CDS | 45.0% | |
| ! | TGTTCTAGGTCTAGAAGGAC+CGG | - | chr7_1:76404341-76404360 | None:intergenic | 45.0% |
| GTCCTTCTAGACCTAGAACA+GGG | + | chr7_1:76404341-76404360 | Msa1039260:CDS | 45.0% | |
| ! | AACCCTGTTCTAGGTCTAGA+AGG | - | chr7_1:76404346-76404365 | None:intergenic | 45.0% |
| ! | ACAGACATGATTCTGGGAGA+AGG | + | chr7_1:76404824-76404843 | Msa1039260:CDS | 45.0% |
| AAAGATGGAAAGTCTGGTGG+TGG | + | chr7_1:76404856-76404875 | Msa1039260:CDS | 45.0% | |
| GCATTTCTATAAGACTGCCG+GGG | - | chr7_1:76404922-76404941 | None:intergenic | 45.0% | |
| TAGAAATGCTAGAGGGTCTC+AGG | + | chr7_1:76404933-76404952 | Msa1039260:CDS | 45.0% | |
| AGAAATGCTAGAGGGTCTCA+GGG | + | chr7_1:76404934-76404953 | Msa1039260:CDS | 45.0% | |
| GGATCATCCCGGAAATCTTA+TGG | + | chr7_1:76404994-76405013 | Msa1039260:CDS | 45.0% | |
| GAAGTAACCGTGATCGGAAT+CGG | + | chr7_1:76405121-76405140 | Msa1039260:CDS | 45.0% | |
| ! | CATCAAACCGATTCCGATCA+CGG | - | chr7_1:76405131-76405150 | None:intergenic | 45.0% |
| TCGTCATCCCGGAAATCTTA+TGG | + | chr7_1:76405162-76405181 | Msa1039260:CDS | 45.0% | |
| CATCAAATCTCTTCCGACCA+CGG | - | chr7_1:76405215-76405234 | None:intergenic | 45.0% | |
| ! | GTCGGAAGAGATTTGATGAC+CGG | + | chr7_1:76405217-76405236 | Msa1039260:CDS | 45.0% |
| ! | AGAGATTTGATGACCGGAGT+AGG | + | chr7_1:76405223-76405242 | Msa1039260:CDS | 45.0% |
| TACAGTATGGATGAGAAGGG+TGG | + | chr7_1:76405291-76405310 | Msa1039260:CDS | 45.0% | |
| AGACGAGCAGAGAGAGAAGA+AGG | - | chr7_1:76401808-76401827 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTGATTCTGAAAC+AGG | - | chr7_1:76401952-76401971 | None:intergenic | 50.0% |
| !! | GTTGTTGTTGGTGATGGTGG+TGG | - | chr7_1:76401970-76401989 | None:intergenic | 50.0% |
| AGGTGGAATTTGTGCATCCG+TGG | + | chr7_1:76402061-76402080 | Msa1039260:CDS | 50.0% | |
| ! | TTTCAGGTCGTTGTCAAGGC+AGG | + | chr7_1:76402514-76402533 | Msa1039260:intron | 50.0% |
| !!! | TGGTTTTGGATGCCCCAATG+TGG | + | chr7_1:76402553-76402572 | Msa1039260:CDS | 50.0% |
| ATGCCCCAATGTGGACAGAA+AGG | + | chr7_1:76402562-76402581 | Msa1039260:CDS | 50.0% | |
| CCACCTTTCTGTCCACATTG+GGG | - | chr7_1:76402568-76402587 | None:intergenic | 50.0% | |
| AAGCTTGTCCACCTGGATGA+AGG | + | chr7_1:76402611-76402630 | Msa1039260:CDS | 50.0% | |
| AGTGTAACACGCATGCCGTT+CGG | + | chr7_1:76402641-76402660 | Msa1039260:intron | 50.0% | |
| !! | TTTGAGATGATGGAAGCCGG+AGG | + | chr7_1:76402778-76402797 | Msa1039260:intron | 50.0% |
| CAAACAAAGAGGACGAGGCA+CGG | + | chr7_1:76403098-76403117 | Msa1039260:CDS | 50.0% | |
| ATCACTGGAGGAGGGAGATT+TGG | - | chr7_1:76403280-76403299 | None:intergenic | 50.0% | |
| ! | GGCTTTTTGATCACTGGAGG+AGG | - | chr7_1:76403289-76403308 | None:intergenic | 50.0% |
| ! | GGAGGCTTTTTGATCACTGG+AGG | - | chr7_1:76403292-76403311 | None:intergenic | 50.0% |
| ! | GGTGGAGGCTTTTTGATCAC+TGG | - | chr7_1:76403295-76403314 | None:intergenic | 50.0% |
| ! | GGTTGTTTCACCTTTGGTGG+AGG | - | chr7_1:76403310-76403329 | None:intergenic | 50.0% |
| ! | GGAGGTTGTTTCACCTTTGG+TGG | - | chr7_1:76403313-76403332 | None:intergenic | 50.0% |
| ! | GGAGGAGGTTGTTTCACCTT+TGG | - | chr7_1:76403316-76403335 | None:intergenic | 50.0% |
| !! | ACACGTCTCTTTGGAGTAGG+AGG | - | chr7_1:76403334-76403353 | None:intergenic | 50.0% |
| !! | CCAACACGTCTCTTTGGAGT+AGG | - | chr7_1:76403337-76403356 | None:intergenic | 50.0% |
| CCTACTCCAAAGAGACGTGT+TGG | + | chr7_1:76403334-76403353 | Msa1039260:CDS | 50.0% | |
| CTCCAAAGAGACGTGTTGGA+CGG | + | chr7_1:76403338-76403357 | Msa1039260:CDS | 50.0% | |
| TCCAAAGAGACGTGTTGGAC+GGG | + | chr7_1:76403339-76403358 | Msa1039260:CDS | 50.0% | |
| TTGAGATGAAAAGGGGGGAC+TGG | + | chr7_1:76403368-76403387 | Msa1039260:CDS | 50.0% | |
| TTTGCTACACCATGTGGACC+AGG | + | chr7_1:76403530-76403549 | Msa1039260:intron | 50.0% | |
| CCTGGAAGCAACTGTCTCTT+GGG | - | chr7_1:76403806-76403825 | None:intergenic | 50.0% | |
| TCCTGGAAGCAACTGTCTCT+TGG | - | chr7_1:76403807-76403826 | None:intergenic | 50.0% | |
| GACAGTTGCTTCCAGGAGAA+TGG | + | chr7_1:76403810-76403829 | Msa1039260:CDS | 50.0% | |
| TCGGTACATTCCCATTCTCC+TGG | - | chr7_1:76403824-76403843 | None:intergenic | 50.0% | |
| ! | TTTTTATCTGGGAGGGGAGG+GGG | - | chr7_1:76403895-76403914 | None:intergenic | 50.0% |
| ! | GTTTTTATCTGGGAGGGGAG+GGG | - | chr7_1:76403896-76403915 | None:intergenic | 50.0% |
| AGATAACAATGCTCGGCGTG+TGG | + | chr7_1:76404243-76404262 | Msa1039260:CDS | 50.0% | |
| GATAACAATGCTCGGCGTGT+GGG | + | chr7_1:76404244-76404263 | Msa1039260:CDS | 50.0% | |
| ! | GTTCTAGGTCTAGAAGGACC+GGG | - | chr7_1:76404340-76404359 | None:intergenic | 50.0% |
| GGTCCTTCTAGACCTAGAAC+AGG | + | chr7_1:76404340-76404359 | Msa1039260:CDS | 50.0% | |
| TCTGCCTTTCCTTCTCTGGT+CGG | - | chr7_1:76404686-76404705 | None:intergenic | 50.0% | |
| ! | GGTTCTGACTCTGACGAAGA+TGG | + | chr7_1:76404730-76404749 | Msa1039260:CDS | 50.0% |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7_1:76405014-76405033 | Msa1039260:CDS | 50.0% |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7_1:76405015-76405034 | Msa1039260:CDS | 50.0% | |
| CTCAGGGAAGTAACCGTGAT+CGG | + | chr7_1:76404950-76404969 | Msa1039260:CDS | 50.0% | |
| GAAGTAACCGTGATCGGAAG+CGG | + | chr7_1:76405037-76405056 | Msa1039260:CDS | 50.0% | |
| CATCAAACCGCTTCCGATCA+CGG | - | chr7_1:76405047-76405066 | None:intergenic | 50.0% | |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7_1:76405014-76405033 | Msa1039260:CDS | 50.0% |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7_1:76405015-76405034 | Msa1039260:CDS | 50.0% | |
| CTCAGGGAAGTAACCGTGAT+CGG | + | chr7_1:76404950-76404969 | Msa1039260:CDS | 50.0% | |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7_1:76405014-76405033 | Msa1039260:CDS | 50.0% |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7_1:76405015-76405034 | Msa1039260:CDS | 50.0% | |
| AGGGTTTAAGAGGCGGCGTT+TGG | - | chr7_1:76401737-76401756 | None:intergenic | 55.0% | |
| !! | GTTGTTGGTGATGGTGGTGG+TGG | - | chr7_1:76401967-76401986 | None:intergenic | 55.0% |
| GGAATTTGTGCATCCGTGGC+CGG | + | chr7_1:76402065-76402084 | Msa1039260:CDS | 55.0% | |
| CCCCAATGTGGACAGAAAGG+TGG | + | chr7_1:76402565-76402584 | Msa1039260:CDS | 55.0% | |
| !! | CGTCTCTTTGGAGTAGGAGG+AGG | - | chr7_1:76403331-76403350 | None:intergenic | 55.0% |
| TCCCGTCCAACACGTCTCTT+TGG | - | chr7_1:76403343-76403362 | None:intergenic | 55.0% | |
| CAACTGTCTCTTGGGACGCT+TGG | - | chr7_1:76403798-76403817 | None:intergenic | 55.0% | |
| CCCAAGAGACAGTTGCTTCC+AGG | + | chr7_1:76403803-76403822 | Msa1039260:CDS | 55.0% | |
| ACGCCCACCTGATGAATTCC+TGG | + | chr7_1:76404045-76404064 | Msa1039260:CDS | 55.0% | |
| TAAGATGGGCAGTCGGCAAG+AGG | + | chr7_1:76404114-76404133 | Msa1039260:CDS | 55.0% | |
| GGCAAGAGGTTTCCAATGCC+TGG | + | chr7_1:76404128-76404147 | Msa1039260:CDS | 55.0% | |
| !! | CGAAGAATAGGAGCGTCCCA+GGG | + | chr7_1:76404284-76404303 | Msa1039260:CDS | 55.0% |
| ATTCGTCATCGTGGGACCCT+GGG | - | chr7_1:76404303-76404322 | None:intergenic | 55.0% | |
| TATTCGTCATCGTGGGACCC+TGG | - | chr7_1:76404304-76404323 | None:intergenic | 55.0% | |
| TCTGGTCGGCAGCAGAAACA+TGG | - | chr7_1:76404672-76404691 | None:intergenic | 55.0% | |
| TTTCTGCTGCCGACCAGAGA+AGG | + | chr7_1:76404674-76404693 | Msa1039260:CDS | 55.0% | |
| GACCAGAGAAGGAAAGGCAG+AGG | + | chr7_1:76404685-76404704 | Msa1039260:CDS | 55.0% | |
| GACCTCTGCCTTTCCTTCTC+TGG | - | chr7_1:76404690-76404709 | None:intergenic | 55.0% | |
| TCTGACGAAGATGGCAGTGC+TGG | + | chr7_1:76404739-76404758 | Msa1039260:CDS | 55.0% | |
| CTCAGGGAAGTAACCGTGGT+CGG | + | chr7_1:76405199-76405218 | Msa1039260:CDS | 55.0% | |
| TTGTGCATCCGTGGCCGGAA+TGG | + | chr7_1:76402070-76402089 | Msa1039260:CDS | 60.0% | |
| ACAATGCTCGGCGTGTGGGA+TGG | + | chr7_1:76404248-76404267 | Msa1039260:CDS | 60.0% | |
| CAATGCTCGGCGTGTGGGAT+GGG | + | chr7_1:76404249-76404268 | Msa1039260:CDS | 60.0% | |
| !! | GCGAAGAATAGGAGCGTCCC+AGG | + | chr7_1:76404283-76404302 | Msa1039260:CDS | 60.0% |
| AGGTCTAGAAGGACCGGGAC+CGG | - | chr7_1:76404335-76404354 | None:intergenic | 60.0% | |
| GCTGCCGACCAGAGAAGGAA+AGG | + | chr7_1:76404679-76404698 | Msa1039260:CDS | 60.0% | |
| GGGTCTCAGGGAAGTAACCG+TGG | + | chr7_1:76404946-76404965 | Msa1039260:CDS | 60.0% | |
| ! | GATGACAGGGAGCACGGCAG+AGG | + | chr7_1:76405255-76405274 | Msa1039260:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 76401703 | 76405353 | 76401703 | ID=Msa1039260;Name=Msa1039260 |
| chr7_1 | mRNA | 76401703 | 76405353 | 76401703 | ID=Msa1039260-mRNA-1;Parent=Msa1039260;Name=Msa1039260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.8|1|1|1|5|0|839 |
| chr7_1 | exon | 76401703 | 76402286 | 76401703 | ID=Msa1039260-mRNA-1:exon:19801;Parent=Msa1039260-mRNA-1 |
| chr7_1 | exon | 76402520 | 76402637 | 76402520 | ID=Msa1039260-mRNA-1:exon:19802;Parent=Msa1039260-mRNA-1 |
| chr7_1 | exon | 76403046 | 76403401 | 76403046 | ID=Msa1039260-mRNA-1:exon:19803;Parent=Msa1039260-mRNA-1 |
| chr7_1 | exon | 76403745 | 76403843 | 76403745 | ID=Msa1039260-mRNA-1:exon:19804;Parent=Msa1039260-mRNA-1 |
| chr7_1 | exon | 76403991 | 76405353 | 76403991 | ID=Msa1039260-mRNA-1:exon:19805;Parent=Msa1039260-mRNA-1 |
| chr7_1 | CDS | 76401703 | 76402286 | 76401703 | ID=Msa1039260-mRNA-1:cds;Parent=Msa1039260-mRNA-1 |
| chr7_1 | CDS | 76402520 | 76402637 | 76402520 | ID=Msa1039260-mRNA-1:cds;Parent=Msa1039260-mRNA-1 |
| chr7_1 | CDS | 76403046 | 76403401 | 76403046 | ID=Msa1039260-mRNA-1:cds;Parent=Msa1039260-mRNA-1 |
| chr7_1 | CDS | 76403745 | 76403843 | 76403745 | ID=Msa1039260-mRNA-1:cds;Parent=Msa1039260-mRNA-1 |
| chr7_1 | CDS | 76403991 | 76405353 | 76403991 | ID=Msa1039260-mRNA-1:cds;Parent=Msa1039260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
