AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1174470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1174470 MtrunA17_Chr4g0069701 97.987 944 18 1 1 943 1 944 0.0 1900
Msa1174470 MtrunA17_Chr4g0059031 23.948 689 453 17 63 728 58 698 1.32e-31 133
Msa1174470 MtrunA17_Chr1g0185501 26.471 306 194 9 365 653 24 315 1.18e-20 94.0
Msa1174470 MtrunA17_Chr1g0185501 26.042 288 179 7 467 748 50 309 1.61e-19 90.9
Msa1174470 MtrunA17_Chr1g0185501 31.579 152 104 0 542 693 30 181 1.86e-17 84.7
Msa1174470 MtrunA17_Chr1g0185501 27.059 170 101 2 101 270 22 168 1.55e-16 81.6
Msa1174470 MtrunA17_Chr1g0185501 26.016 123 91 0 571 693 17 139 7.42e-13 70.9
Msa1174470 MtrunA17_Chr1g0185501 23.786 206 145 5 24 223 117 316 2.91e-11 65.9
Msa1174470 MtrunA17_Chr1g0185501 25.949 158 115 2 63 218 67 224 4.96e-11 65.1
Msa1174470 MtrunA17_Chr4g0067151 27.969 261 170 6 402 654 75 325 1.52e-20 94.0
Msa1174470 MtrunA17_Chr4g0067151 32.934 167 110 2 54 218 67 233 3.20e-20 93.2
Msa1174470 MtrunA17_Chr4g0067151 28.662 157 111 1 545 700 84 240 2.60e-16 81.3
Msa1174470 MtrunA17_Chr4g0067151 25.497 302 178 7 396 692 18 277 6.11e-16 80.1
Msa1174470 MtrunA17_Chr4g0067151 25.683 183 104 3 97 270 18 177 6.04e-14 74.3
Msa1174470 MtrunA17_Chr4g0067151 22.105 190 137 5 39 222 142 326 1.35e-11 67.0
Msa1174470 MtrunA17_Chr6g0448921 27.473 182 125 2 40 220 40 215 4.91e-20 95.9
Msa1174470 MtrunA17_Chr6g0448921 26.943 193 130 2 501 693 32 213 1.85e-16 84.3
Msa1174470 MtrunA17_Chr6g0448921 28.571 196 131 4 15 208 57 245 3.91e-14 77.0
Msa1174470 MtrunA17_Chr6g0448921 25.503 149 111 0 71 219 24 172 3.13e-12 70.9
Msa1174470 MtrunA17_Chr3g0136971 24.464 233 157 2 474 698 407 628 1.08e-19 94.7
Msa1174470 MtrunA17_Chr3g0136971 28.497 193 105 4 66 230 352 539 2.49e-15 80.5
Msa1174470 MtrunA17_Chr3g0136971 32.673 101 68 0 79 179 518 618 1.22e-12 72.0
Msa1174470 MtrunA17_Chr3g0136971 26.056 142 105 0 78 219 433 574 3.71e-12 70.5
Msa1174470 MtrunA17_Chr2g0281451 25.773 194 137 2 40 232 39 226 2.27e-18 90.9
Msa1174470 MtrunA17_Chr2g0281451 26.667 150 110 0 70 219 22 171 2.26e-12 71.2
Msa1174470 MtrunA17_Chr2g0281451 26.289 194 130 3 501 693 31 212 9.28e-12 69.3
Msa1174470 MtrunA17_Chr1g0176241 28.627 255 162 5 399 650 244 481 9.80e-18 87.4
Msa1174470 MtrunA17_Chr1g0176241 30.380 158 101 4 67 217 121 276 1.84e-12 70.9
Msa1174470 MtrunA17_Chr1g0176241 30.263 152 100 4 69 217 333 481 3.08e-12 70.1
Msa1174470 MtrunA17_Chr1g0176241 29.341 167 110 4 542 702 122 286 1.64e-11 67.8
Msa1174470 MtrunA17_Chr5g0401661 33.793 145 94 2 78 222 410 552 4.14e-16 83.2
Msa1174470 MtrunA17_Chr1g0197551 23.897 272 167 4 454 696 19 279 4.53e-16 83.6
Msa1174470 MtrunA17_Chr1g0197551 27.612 134 97 0 86 219 31 164 3.63e-13 73.9
Msa1174470 MtrunA17_Chr4g0053651 32.124 193 115 6 43 222 256 445 9.19e-16 81.6
Msa1174470 MtrunA17_Chr4g0053651 26.705 176 107 4 63 224 373 540 2.95e-11 67.4
Msa1174470 MtrunA17_Chr2g0331961 25.368 272 185 7 408 672 20 280 1.06e-15 79.3
Msa1174470 MtrunA17_Chr7g0266251 27.670 206 130 5 501 693 37 236 4.72e-15 77.8
Msa1174470 MtrunA17_Chr7g0266251 26.442 208 123 7 78 272 36 226 6.25e-13 71.2
Msa1174470 MtrunA17_Chr7g0266251 31.176 170 99 6 68 221 72 239 4.40e-12 68.6
Msa1174470 MtrunA17_Chr5g0401671 32.414 145 96 2 78 222 320 462 6.94e-15 79.0
Msa1174470 MtrunA17_Chr5g0401671 27.338 139 88 3 101 230 425 559 2.57e-11 67.4
Msa1174470 MtrunA17_Chr8g0352821 25.101 247 169 6 449 692 188 421 7.48e-15 79.3
Msa1174470 MtrunA17_Chr8g0352821 30.675 163 108 3 85 246 288 446 1.00e-14 79.0
Msa1174470 MtrunA17_Chr8g0352821 29.560 159 104 5 76 231 322 475 2.35e-11 67.8
Msa1174470 MtrunA17_Chr1g0172501 31.944 144 97 1 550 692 409 552 8.72e-15 78.6
Msa1174470 MtrunA17_Chr1g0172501 26.295 251 169 7 22 268 318 556 2.67e-11 67.4
Msa1174470 MtrunA17_Chr7g0253861 32.787 122 80 2 102 221 51 172 9.27e-15 77.0
Msa1174470 MtrunA17_Chr3g0093681 31.944 144 97 1 550 692 409 552 1.94e-14 77.4
Msa1174470 MtrunA17_Chr3g0093681 23.574 263 172 5 433 692 274 510 1.36e-12 71.6
Msa1174470 MtrunA17_Chr3g0093681 26.587 252 167 8 22 268 318 556 4.11e-11 66.6
Msa1174470 MtrunA17_Chr4g0035611 27.660 141 102 0 79 219 24 164 3.82e-14 77.4
Msa1174470 MtrunA17_Chr4g0035611 23.308 266 164 4 460 696 25 279 4.09e-14 77.0
Msa1174470 MtrunA17_Chr5g0405851 26.126 222 150 4 472 692 241 449 4.31e-14 75.9
Msa1174470 MtrunA17_Chr5g0405851 29.464 224 143 6 48 268 242 453 5.23e-14 75.5
Msa1174470 MtrunA17_Chr1g0200901 25.676 296 205 8 401 693 119 402 5.62e-14 75.1
Msa1174470 MtrunA17_Chr1g0200901 28.856 201 97 5 70 224 85 285 9.00e-11 65.1
Msa1174470 MtrunA17_Chr2g0284241 24.904 261 179 7 380 631 70 322 6.78e-14 73.9
Msa1174470 MtrunA17_Chr2g0284241 19.608 306 234 5 374 673 23 322 2.59e-11 66.2
Msa1174470 MtrunA17_Chr2g0295791 29.530 149 104 1 571 718 160 308 1.08e-13 74.7
Msa1174470 MtrunA17_Chr2g0295791 26.882 186 135 1 542 726 173 358 8.39e-13 72.0
Msa1174470 MtrunA17_Chr2g0295791 27.273 154 111 1 68 220 173 326 2.67e-11 67.0
Msa1174470 MtrunA17_Chr4g0057141 22.475 396 266 17 274 651 273 645 1.32e-13 75.1
Msa1174470 MtrunA17_Chr1g0185891 22.222 396 267 17 274 651 212 584 3.35e-13 73.6
Msa1174470 MtrunA17_Chr4g0004241 22.603 292 202 7 408 689 18 295 7.07e-13 72.8
Msa1174470 MtrunA17_Chr4g0004241 31.387 137 90 3 85 217 120 256 1.83e-11 68.6
Msa1174470 MtrunA17_Chr4g0004241 23.887 247 171 5 454 695 25 259 2.93e-11 67.8
Msa1174470 MtrunA17_Chr7g0273631 27.778 126 91 0 95 220 207 332 2.33e-12 71.2
Msa1174470 MtrunA17_Chr2g0331981 22.483 298 206 8 403 689 12 295 2.62e-12 71.2
Msa1174470 MtrunA17_Chr2g0331981 31.387 137 90 3 85 217 120 256 1.46e-11 68.6
Msa1174470 MtrunA17_Chr2g0331981 23.810 252 175 5 449 695 20 259 1.53e-11 68.6
Msa1174470 MtrunA17_Chr1g0191191 30.702 114 79 0 101 214 212 325 4.98e-12 70.1
Msa1174470 MtrunA17_Chr1g0154301 23.333 300 193 10 402 694 109 378 7.09e-12 68.9
Msa1174470 MtrunA17_Chr3g0116561 26.977 215 140 6 21 220 169 381 1.06e-11 68.6
Msa1174470 MtrunA17_Chr7g0246741 26.697 221 122 6 62 272 366 556 1.18e-11 68.9
Msa1174470 MtrunA17_Chr8g0390861 26.316 133 96 1 85 217 973 1103 1.47e-11 68.9
Msa1174470 MtrunA17_Chr7g0237271 30.435 184 98 5 109 289 510 666 1.75e-11 68.2
Msa1174470 MtrunA17_Chr8g0392701 28.829 222 143 6 482 696 11 224 2.13e-11 66.2
Msa1174470 MtrunA17_Chr3g0099061 32.743 113 75 1 73 184 273 385 2.18e-11 67.4
Msa1174470 MtrunA17_Chr1g0148791 33.333 138 87 3 92 224 605 742 2.52e-11 67.8
Msa1174470 MtrunA17_Chr2g0292301 26.582 158 96 4 85 223 170 326 5.94e-11 66.2
Msa1174470 MtrunA17_Chr2g0292301 26.490 151 108 3 542 692 213 360 6.82e-11 65.9
Msa1174470 MtrunA17_Chr7g0237241 32.061 131 85 3 109 237 501 629 7.55e-11 66.2
Msa1174470 MtrunA17_Chr3g0138311 30.769 143 90 5 89 224 601 741 8.30e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1174470 AT3G21540.1 67.412 939 291 2 1 931 1 932 0.0 1296
Msa1174470 AT5G16750.1 25.895 363 251 8 385 731 336 696 2.72e-24 110
Msa1174470 AT5G16750.1 28.485 165 109 4 63 219 58 221 3.46e-13 74.3
Msa1174470 AT5G16750.1 27.950 161 110 3 539 693 60 220 3.90e-12 70.9
Msa1174470 AT5G08390.1 28.571 182 123 2 40 220 40 215 3.65e-20 97.1
Msa1174470 AT5G08390.1 24.870 193 134 2 501 693 32 213 5.06e-14 77.0
Msa1174470 AT5G08390.1 25.941 239 162 5 14 250 56 281 2.69e-12 71.6
Msa1174470 AT5G08390.1 25.503 149 111 0 71 219 24 172 1.62e-11 68.9
Msa1174470 AT5G23430.3 28.022 182 124 2 40 220 40 215 1.75e-19 94.7
Msa1174470 AT5G23430.3 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa1174470 AT5G23430.3 25.121 207 145 5 14 218 56 254 2.79e-11 68.2
Msa1174470 AT5G23430.3 25.503 149 111 0 71 219 24 172 7.82e-11 66.6
Msa1174470 AT5G23430.2 28.022 182 124 2 40 220 40 215 1.75e-19 94.7
Msa1174470 AT5G23430.2 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa1174470 AT5G23430.2 25.121 207 145 5 14 218 56 254 2.79e-11 68.2
Msa1174470 AT5G23430.2 25.503 149 111 0 71 219 24 172 7.82e-11 66.6
Msa1174470 AT5G23430.1 28.022 182 124 2 40 220 40 215 1.78e-19 94.7
Msa1174470 AT5G23430.1 25.907 193 132 2 501 693 32 213 2.17e-15 81.6
Msa1174470 AT5G23430.1 25.121 207 145 5 14 218 56 254 2.88e-11 68.2
Msa1174470 AT5G23430.1 25.503 149 111 0 71 219 24 172 7.76e-11 66.6
Msa1174470 AT3G49660.1 25.670 261 178 5 400 654 66 316 2.52e-19 90.5
Msa1174470 AT3G49660.1 28.500 200 141 2 22 219 28 227 6.22e-19 89.4
Msa1174470 AT3G49660.1 25.000 188 132 4 39 222 135 317 1.53e-17 85.1
Msa1174470 AT3G49660.1 30.573 157 108 1 545 700 77 233 3.53e-17 84.3
Msa1174470 AT3G49660.1 25.967 181 129 1 518 693 3 183 2.93e-13 72.4
Msa1174470 AT3G49660.1 23.381 278 154 5 467 697 52 317 3.80e-11 65.9
Msa1174470 AT3G49660.1 28.000 125 85 1 576 695 19 143 8.13e-11 65.1
Msa1174470 AT1G61210.3 28.022 182 124 3 40 220 39 214 8.27e-19 92.8
Msa1174470 AT1G61210.3 30.000 150 105 0 70 219 22 171 4.53e-14 77.4
Msa1174470 AT1G61210.3 25.758 198 126 4 501 693 31 212 5.77e-13 73.9
Msa1174470 AT1G61210.3 25.359 209 140 7 15 218 56 253 5.76e-11 67.4
Msa1174470 AT1G61210.2 28.022 182 124 3 40 220 39 214 1.00e-18 92.4
Msa1174470 AT1G61210.2 30.000 150 105 0 70 219 22 171 5.61e-14 77.0
Msa1174470 AT1G61210.2 25.758 198 126 4 501 693 31 212 6.13e-13 73.9
Msa1174470 AT1G61210.2 25.359 209 140 7 15 218 56 253 8.61e-11 66.6
Msa1174470 AT1G61210.1 28.022 182 124 3 40 220 39 214 1.17e-18 92.4
Msa1174470 AT1G61210.1 30.000 150 105 0 70 219 22 171 6.49e-14 77.0
Msa1174470 AT1G61210.1 25.758 198 126 4 501 693 31 212 6.67e-13 73.6
Msa1174470 AT1G61210.1 25.359 209 140 7 15 218 56 253 9.96e-11 66.6
Msa1174470 AT5G25150.1 24.215 223 158 1 484 706 416 627 1.38e-18 91.7
Msa1174470 AT5G25150.1 23.134 268 163 4 78 302 366 633 1.09e-14 79.0
Msa1174470 AT5G25150.1 27.389 157 112 1 63 219 419 573 6.52e-13 73.2
Msa1174470 AT5G25150.1 40.196 102 54 2 41 141 526 621 9.18e-12 69.7
Msa1174470 AT1G11160.4 28.571 182 123 3 40 220 39 214 1.72e-18 91.7
Msa1174470 AT1G11160.4 30.000 150 105 0 70 219 22 171 7.63e-15 79.7
Msa1174470 AT1G11160.4 23.423 222 148 5 478 693 7 212 2.85e-12 71.6
Msa1174470 AT5G25150.2 24.215 223 158 1 484 706 416 627 1.78e-18 91.3
Msa1174470 AT5G25150.2 23.134 268 163 4 78 302 366 633 1.11e-14 79.0
Msa1174470 AT5G25150.2 27.389 157 112 1 63 219 419 573 6.54e-13 73.2
Msa1174470 AT5G25150.2 40.196 102 54 2 41 141 526 621 8.98e-12 69.7
Msa1174470 AT1G11160.1 28.571 182 123 3 40 220 39 214 1.79e-18 91.7
Msa1174470 AT1G11160.1 30.000 150 105 0 70 219 22 171 7.78e-15 79.7
Msa1174470 AT1G11160.1 23.423 222 148 5 478 693 7 212 2.44e-12 71.6
Msa1174470 AT1G11160.2 28.571 182 123 3 40 220 39 214 1.85e-18 91.7
Msa1174470 AT1G11160.2 30.000 150 105 0 70 219 22 171 8.32e-15 79.7
Msa1174470 AT1G11160.2 23.423 222 148 5 478 693 7 212 2.75e-12 71.6
Msa1174470 AT4G02730.1 25.828 302 192 9 370 653 45 332 1.27e-17 85.9
Msa1174470 AT4G02730.1 28.926 121 85 1 101 220 38 158 6.18e-16 80.9
Msa1174470 AT4G02730.1 24.715 263 171 8 479 735 78 319 3.19e-15 78.6
Msa1174470 AT1G11160.3 28.931 159 112 1 63 220 14 172 2.54e-17 87.8
Msa1174470 AT1G11160.3 29.508 122 86 0 98 219 8 129 3.63e-11 67.8
Msa1174470 AT5G52820.1 28.854 253 163 6 399 650 235 471 3.45e-17 86.3
Msa1174470 AT5G52820.1 27.984 243 120 6 54 241 229 471 1.56e-12 71.6
Msa1174470 AT5G52820.1 30.723 166 107 4 63 221 107 271 8.59e-12 68.9
Msa1174470 AT5G52820.1 24.701 251 169 7 542 773 112 361 4.13e-11 67.0
Msa1174470 AT3G15980.7 24.161 298 201 8 403 689 12 295 8.83e-16 82.8
Msa1174470 AT3G15980.7 23.887 247 171 5 454 695 25 259 1.36e-11 69.3
Msa1174470 AT3G15980.7 30.657 137 91 3 85 217 120 256 7.54e-11 66.6
Msa1174470 AT3G15980.1 24.161 298 201 8 403 689 12 295 9.10e-16 82.8
Msa1174470 AT3G15980.1 23.887 247 171 5 454 695 25 259 1.31e-11 69.3
Msa1174470 AT3G15980.1 30.657 137 91 3 85 217 120 256 7.40e-11 67.0
Msa1174470 AT3G15980.5 24.161 298 201 8 403 689 12 295 9.31e-16 82.8
Msa1174470 AT3G15980.5 23.887 247 171 5 454 695 25 259 1.47e-11 69.3
Msa1174470 AT3G15980.5 30.657 137 91 3 85 217 120 256 8.13e-11 66.6
Msa1174470 AT3G15980.3 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa1174470 AT3G15980.3 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa1174470 AT3G15980.3 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa1174470 AT3G15980.6 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa1174470 AT3G15980.6 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa1174470 AT3G15980.6 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa1174470 AT3G15980.2 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa1174470 AT3G15980.2 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa1174470 AT3G15980.2 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa1174470 AT3G15980.4 24.161 298 201 8 403 689 12 295 9.39e-16 82.8
Msa1174470 AT3G15980.4 23.887 247 171 5 454 695 25 259 1.41e-11 69.3
Msa1174470 AT3G15980.4 30.657 137 91 3 85 217 120 256 8.81e-11 66.6
Msa1174470 AT5G13480.2 31.902 163 106 3 85 246 239 397 9.42e-16 82.4
Msa1174470 AT5G13480.2 24.823 282 186 8 432 702 116 382 1.36e-11 68.9
Msa1174470 AT5G13480.2 29.861 144 98 3 76 217 273 415 6.03e-11 67.0
Msa1174470 AT5G13480.3 31.902 163 106 3 85 246 216 374 1.00e-15 82.0
Msa1174470 AT5G13480.3 24.823 282 186 8 432 702 93 359 1.39e-11 68.9
Msa1174470 AT5G13480.3 29.861 144 98 3 76 217 250 392 6.76e-11 66.6
Msa1174470 AT5G13480.4 31.902 163 106 3 85 246 216 374 1.15e-15 82.0
Msa1174470 AT5G13480.4 24.823 282 186 8 432 702 93 359 1.18e-11 68.9
Msa1174470 AT5G13480.4 29.861 144 98 3 76 217 250 392 7.55e-11 66.6
Msa1174470 AT5G13480.1 31.902 163 106 3 85 246 228 386 1.58e-15 81.6
Msa1174470 AT5G13480.1 25.081 307 197 9 414 702 80 371 1.42e-11 68.9
Msa1174470 AT5G13480.1 29.861 144 98 3 76 217 262 404 9.65e-11 66.2
Msa1174470 AT2G26060.2 25.806 248 152 8 465 692 5 240 4.16e-15 78.2
Msa1174470 AT2G26060.2 32.121 165 96 7 68 217 77 240 1.69e-11 67.4
Msa1174470 AT2G26060.2 25.000 216 136 7 68 272 31 231 2.41e-11 66.6
Msa1174470 AT2G26060.1 25.806 248 152 8 465 692 5 240 4.69e-15 78.2
Msa1174470 AT2G26060.1 32.121 165 96 7 68 217 77 240 2.25e-11 67.0
Msa1174470 AT2G26060.1 25.000 216 136 7 68 272 31 231 3.43e-11 66.6
Msa1174470 AT2G43770.1 31.148 122 82 2 102 221 49 170 6.93e-15 77.8
Msa1174470 AT2G43770.1 25.670 261 174 7 482 741 49 290 2.20e-11 67.0
Msa1174470 AT2G21390.1 28.358 134 96 0 86 219 31 164 2.45e-14 78.2
Msa1174470 AT2G21390.1 22.794 272 170 4 454 696 19 279 1.22e-13 75.9
Msa1174470 AT2G21390.1 22.515 342 222 10 354 689 9 313 1.30e-11 69.3
Msa1174470 AT3G18140.1 25.738 237 167 5 380 613 55 285 2.45e-14 75.5
Msa1174470 AT3G18140.1 22.712 295 198 9 413 692 1 280 1.46e-13 73.2
Msa1174470 AT3G18140.1 19.870 307 228 6 374 673 8 303 9.95e-11 64.7
Msa1174470 AT1G62020.1 27.660 141 102 0 79 219 24 164 3.53e-14 77.8
Msa1174470 AT1G62020.1 22.807 342 215 10 354 686 9 310 1.95e-11 68.9
Msa1174470 AT1G62020.1 23.868 243 159 5 454 696 19 235 3.72e-11 67.8
Msa1174470 AT1G52360.3 23.154 298 204 8 403 689 12 295 1.41e-13 75.9
Msa1174470 AT1G52360.3 31.387 137 90 3 85 217 120 256 2.50e-11 68.6
Msa1174470 AT1G52360.3 23.887 247 171 5 454 695 25 259 7.01e-11 67.0
Msa1174470 AT1G52360.4 23.154 298 204 8 403 689 12 295 1.42e-13 75.9
Msa1174470 AT1G52360.4 31.387 137 90 3 85 217 120 256 2.46e-11 68.6
Msa1174470 AT1G52360.4 23.887 247 171 5 454 695 25 259 7.02e-11 67.0
Msa1174470 AT1G52360.1 23.154 298 204 8 403 689 12 295 1.42e-13 75.9
Msa1174470 AT1G52360.1 31.387 137 90 3 85 217 120 256 2.46e-11 68.6
Msa1174470 AT1G52360.1 23.887 247 171 5 454 695 25 259 7.02e-11 67.0
Msa1174470 AT1G52360.2 23.154 298 204 8 403 689 56 339 1.59e-13 75.5
Msa1174470 AT1G52360.2 31.387 137 90 3 85 217 164 300 2.73e-11 68.2
Msa1174470 AT1G52360.2 23.887 247 171 5 454 695 69 303 7.28e-11 67.0
Msa1174470 AT3G16650.1 31.818 132 89 1 571 701 160 291 1.78e-13 74.3
Msa1174470 AT3G16650.1 29.677 155 105 3 68 220 173 325 2.34e-12 70.9
Msa1174470 AT3G16650.1 28.289 152 108 1 542 693 173 323 9.88e-12 68.9
Msa1174470 AT4G15900.1 31.298 131 89 1 571 700 166 296 1.99e-13 74.3
Msa1174470 AT4G15900.1 27.419 186 134 1 542 726 179 364 6.35e-13 72.8
Msa1174470 AT4G15900.1 27.922 154 110 1 68 220 179 332 6.81e-12 69.3
Msa1174470 AT1G49040.1 27.068 133 95 1 85 217 959 1089 2.16e-13 75.1
Msa1174470 AT1G49040.1 31.206 141 92 3 82 220 873 1010 8.56e-11 66.6
Msa1174470 AT1G79990.1 22.569 288 207 6 408 689 18 295 3.15e-13 74.7
Msa1174470 AT1G79990.1 31.387 137 90 3 85 217 120 256 4.38e-11 67.4
Msa1174470 AT1G79990.1 24.900 249 166 6 454 695 25 259 4.65e-11 67.4
Msa1174470 AT3G05090.2 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa1174470 AT3G05090.3 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa1174470 AT3G05090.1 30.252 119 83 0 96 214 203 321 3.35e-13 74.3
Msa1174470 AT1G79990.2 22.569 288 207 6 408 689 18 295 3.36e-13 74.3
Msa1174470 AT1G79990.2 31.387 137 90 3 85 217 120 256 4.33e-11 67.8
Msa1174470 AT1G79990.2 24.900 249 166 6 454 695 25 259 4.96e-11 67.4
Msa1174470 AT1G71840.1 31.507 146 97 2 77 219 126 271 4.68e-13 72.8
Msa1174470 AT1G10580.1 22.222 396 266 18 274 651 202 573 1.39e-12 72.0
Msa1174470 AT2G41500.1 28.249 177 120 3 542 717 384 554 2.59e-12 71.2
Msa1174470 AT2G41500.1 25.974 154 112 2 68 220 301 453 4.77e-11 67.0
Msa1174470 AT2G41500.2 28.249 177 120 3 542 717 384 554 2.59e-12 71.2
Msa1174470 AT2G41500.2 25.974 154 112 2 68 220 301 453 4.77e-11 67.0
Msa1174470 AT1G73720.1 32.143 112 76 0 73 184 272 383 3.54e-12 70.5
Msa1174470 AT4G29830.1 22.989 261 185 6 428 677 42 297 3.78e-12 68.9
Msa1174470 AT4G29830.1 31.013 158 101 4 68 217 161 318 2.48e-11 66.6
Msa1174470 AT1G24130.1 28.910 211 126 8 487 694 118 307 4.09e-12 69.7
Msa1174470 AT2G22040.1 24.464 233 168 5 404 632 83 311 6.16e-12 68.2
Msa1174470 AT5G67320.1 26.056 142 96 1 101 233 443 584 7.33e-12 69.7
Msa1174470 AT5G67320.1 30.822 146 99 2 78 223 338 481 1.13e-11 69.3
Msa1174470 AT3G18950.1 29.474 190 119 7 446 630 249 428 9.79e-12 68.9
Msa1174470 AT1G49040.3 31.206 141 92 3 82 220 873 1010 7.79e-11 67.0

Find 223 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGATTAGATTATTGTTTA+AGG 0.109361 8_1:-5561888 None:intergenic
CTGCCTCAGTTAGAGGTTTA+TGG 0.129256 8_1:-5560010 None:intergenic
AAGATTTGGGGTTTGGATTT+TGG 0.143988 8_1:+5563723 Msa1174470:CDS
GACCAGGTTTCTGCTTAATT+TGG 0.213610 8_1:-5562303 None:intergenic
TCCGATGTCAATAATTTCTA+AGG 0.231965 8_1:-5562158 None:intergenic
AGGACCATTGATTCTGGATA+TGG 0.253244 8_1:+5562076 Msa1174470:CDS
TGCTTAAGGACCATTGATTC+TGG 0.267799 8_1:+5562070 Msa1174470:CDS
TTGTAGATTGCTGGTGGTTA+TGG 0.269715 8_1:+5560352 Msa1174470:intron
AAATATAAAGATTTGGGGTT+TGG 0.274000 8_1:+5563716 Msa1174470:CDS
AATTTCTAAGGTTCCCTCTT+TGG 0.279588 8_1:-5562146 None:intergenic
AAGGACATCATGCAGATATT+TGG 0.284825 8_1:+5564003 Msa1174470:CDS
CTTGGTTCGTTACTTGCTTC+TGG 0.290833 8_1:+5560472 Msa1174470:CDS
AAGATCATGATGTAAAGTTT+TGG 0.301006 8_1:+5562275 Msa1174470:CDS
GGTGAGAGGTTTCTTGTTAC+GGG 0.301877 8_1:+5561359 Msa1174470:CDS
GCTACAGAGGGAACTGAAAA+TGG 0.302758 8_1:+5561686 Msa1174470:CDS
CAGAGCAACAGCGATATATT+TGG 0.305314 8_1:-5562851 None:intergenic
ATTCTTCCGTTTCAAACAAA+TGG 0.310504 8_1:+5561459 Msa1174470:CDS
AAAGTAATCTGTCAGTGATA+TGG 0.314002 8_1:+5568047 Msa1174470:exon
ATTGTTGCTGCCTCAGTTAG+AGG 0.314308 8_1:-5560017 None:intergenic
AGATGTTCACTCGAATGATT+TGG 0.314751 8_1:+5565221 Msa1174470:CDS
ATTCTCCCCACTAACAAGTA+TGG 0.315078 8_1:+5562112 Msa1174470:CDS
TTGTTGTTGTTGTAGATTGC+TGG 0.316564 8_1:+5560343 Msa1174470:intron
AGGGTTTATGTTTCTGAATT+CGG 0.323049 8_1:-5559978 None:intergenic
AAATTCTTCCTTTCATTGTA+TGG 0.324955 8_1:+5563621 Msa1174470:CDS
TGACCTATCTTGTAAACGTT+TGG 0.330769 8_1:-5567986 None:intergenic
GTGACAAAGCCATGTTTATC+TGG 0.332607 8_1:-5562244 None:intergenic
AGTTAGAGGTTTATGGCTTC+AGG 0.333267 8_1:-5560003 None:intergenic
GAGCAGCTGTTAACTCTTGA+AGG 0.344882 8_1:+5563984 Msa1174470:CDS
AGCTTCAAAGCATCTGAAAA+AGG 0.349352 8_1:-5566666 None:intergenic
GACACGGAACGGAAGGAGTT+AGG 0.353040 8_1:-5560199 None:intergenic
GAGGGAGCAGTGGCCGTAGC+TGG 0.355157 8_1:+5564443 Msa1174470:CDS
GCGGGCATCATAGTGAAATT+TGG 0.355465 8_1:+5561318 Msa1174470:CDS
TAGAGCTTTGATCCCCAAAA+AGG 0.355848 8_1:+5568182 Msa1174470:three_prime_UTR
CGGCGTATGGCACGTGCGAC+AGG 0.357028 8_1:+5560160 Msa1174470:CDS
TGGTGAGAGGTTTCTTGTTA+CGG 0.358856 8_1:+5561358 Msa1174470:CDS
CGCATCTTCCCCTTCTCAAT+TGG 0.360934 8_1:+5560250 Msa1174470:CDS
CAGGGTTGGAAAGATATCTT+TGG 0.366703 8_1:+5567778 Msa1174470:intron
ACGGTCCAGTTCAACAAGTC+TGG 0.368774 8_1:+5561536 Msa1174470:CDS
ACTTGTGAAACTACTTTGAA+TGG 0.371051 8_1:+5560412 Msa1174470:CDS
CTGCTAGCCTGTCATGTTGC+AGG 0.373311 8_1:+5561563 Msa1174470:CDS
GTTATGGTGATGGCAGTATA+AGG 0.381571 8_1:+5560368 Msa1174470:CDS
GAGGTTTATGGCTTCAGGGC+AGG 0.384854 8_1:-5559998 None:intergenic
TTTGGTTTCACCACTTTCAA+TGG 0.388959 8_1:-5561918 None:intergenic
TGGAGAGAGAAGGTGTTTGC+CGG 0.397043 8_1:-5560123 None:intergenic
CAAGCACTGGTTCCTGCTTA+AGG 0.399856 8_1:+5562056 Msa1174470:CDS
ACTACTTTGAATGGACATAA+AGG 0.403139 8_1:+5560421 Msa1174470:CDS
AACAAGTCCATACTTGTTAG+TGG 0.404799 8_1:-5562119 None:intergenic
GTGATGGCAGTATAAGGCTT+TGG 0.406032 8_1:+5560374 Msa1174470:CDS
TACGAGCCGTCGGCCTCGTT+CGG 0.406186 8_1:+5560059 Msa1174470:CDS
TTATCATTCTCTTTCACTAA+AGG 0.408940 8_1:-5568159 None:intergenic
TTTACGGTTAACCCTACGTT+TGG 0.412708 8_1:-5561639 None:intergenic
CTAAACACATAATGTGTCTT+GGG 0.413873 8_1:-5563915 None:intergenic
CCCTGACAAGAAAACCGTAT+TGG 0.418561 8_1:-5568347 None:intergenic
AGGTTTATGGCTTCAGGGCA+GGG 0.427509 8_1:-5559997 None:intergenic
AGAAAAGGAGAAAAGGTTAG+AGG 0.430268 8_1:+5564352 Msa1174470:CDS
AATCCAAACGTTTACAAGAT+AGG 0.431727 8_1:+5567983 Msa1174470:CDS
CAAGCTGCCTGTTCTGTGTA+TGG 0.432952 8_1:+5563647 Msa1174470:CDS
ATGGACTTCATATTCTGATA+AGG 0.434489 8_1:+5566707 Msa1174470:CDS
TATTAAATTATTACTGATGC+TGG 0.435590 8_1:+5568255 Msa1174470:three_prime_UTR
GTTGAGCTTGTTTGCCGCAT+AGG 0.437045 8_1:+5566872 Msa1174470:CDS
AACATCCCATTTGTTTGAAA+CGG 0.438262 8_1:-5561465 None:intergenic
GGATCGGGTAGTAAAGTATT+GGG 0.438596 8_1:+5563947 Msa1174470:CDS
CAGCACTGTATGCAAATTGT+AGG 0.439645 8_1:+5561296 Msa1174470:CDS
ATGACCGCTCAATTCGCCGC+TGG 0.439674 8_1:+5564072 Msa1174470:CDS
ATATATCGCTGTTGCTCTGT+TGG 0.442603 8_1:+5562855 Msa1174470:CDS
CTGGTGGCTCAGAAAAGGTC+AGG 0.449171 8_1:+5568274 Msa1174470:three_prime_UTR
ACTAAACACATAATGTGTCT+TGG 0.450141 8_1:-5563916 None:intergenic
ACTAACAAGTATGGACTTGT+TGG 0.450467 8_1:+5562121 Msa1174470:CDS
TGATGGCAGTATAAGGCTTT+GGG 0.451384 8_1:+5560375 Msa1174470:CDS
AAGGCTTTGGGACACTGATA+AGG 0.454505 8_1:+5560387 Msa1174470:CDS
TGCAGGAAGAAAAGGAGAAA+AGG 0.456027 8_1:+5564345 Msa1174470:intron
TTCTTCCGTTTCAAACAAAT+GGG 0.456759 8_1:+5561460 Msa1174470:CDS
GCTCTTCGTTATAATAAGCT+TGG 0.457028 8_1:+5560454 Msa1174470:CDS
ACACGGAACGGAAGGAGTTA+GGG 0.460558 8_1:-5560198 None:intergenic
GGTTAGAGTAAAAGAAAAGA+AGG 0.462341 8_1:+5559944 None:intergenic
AAGTAATCTGTCAGTGATAT+GGG 0.462829 8_1:+5568048 Msa1174470:exon
CAGGCAAATCCGCTTATGAA+TGG 0.463316 8_1:+5565162 Msa1174470:CDS
GATTCCCAGACTTGTTGAAC+TGG 0.464352 8_1:-5561541 None:intergenic
CATTCATAAGCGGATTTGCC+TGG 0.466961 8_1:-5565161 None:intergenic
ACCGGTCTCTTTCGTCTTCG+CGG 0.468552 8_1:+5560538 Msa1174470:CDS
AAAGCGCATTAGTGAACATC+AGG 0.469415 8_1:+5564538 Msa1174470:CDS
TCTCCAGCTCTCGAGAAAAT+CGG 0.471941 8_1:+5560140 Msa1174470:CDS
GTTAGAGGTTTATGGCTTCA+GGG 0.473122 8_1:-5560002 None:intergenic
TGATTTGGAGCAAACATTGT+TGG 0.473436 8_1:+5565236 Msa1174470:CDS
TTACAAGATAGGTCAGATAC+TGG 0.473870 8_1:+5567994 Msa1174470:CDS
TGGGATGTTGTTGGTGAGAC+CGG 0.475059 8_1:+5560520 Msa1174470:CDS
TCTTCGCGGTCATCGCGATC+AGG 0.476794 8_1:+5560552 Msa1174470:CDS
TGACCGCTCAATTCGCCGCT+GGG 0.478756 8_1:+5564073 Msa1174470:CDS
GATATATCCATACACAGAAC+AGG 0.484826 8_1:-5563654 None:intergenic
CTTAAGCAGGAACCAGTGCT+TGG 0.485480 8_1:-5562055 None:intergenic
AGAATCAATGGTCCTTAAGC+AGG 0.485502 8_1:-5562068 None:intergenic
AGGATCGGGTAGTAAAGTAT+TGG 0.486881 8_1:+5563946 Msa1174470:CDS
TGCAGCCATGGATCATATCC+AGG 0.490141 8_1:+5567810 Msa1174470:CDS
TTTGGCTTTACGCTTTGCTT+CGG 0.490529 8_1:-5561621 None:intergenic
AGGCTTTGGGACACTGATAA+GGG 0.491112 8_1:+5560388 Msa1174470:CDS
ACACTTGGTATTGATCTTGA+AGG 0.491254 8_1:+5561944 Msa1174470:CDS
TCTGTTGGATAGTACTGTTA+AGG 0.493169 8_1:+5562870 Msa1174470:CDS
GATGGAGATTTAATTGTGAC+TGG 0.497096 8_1:+5563681 Msa1174470:CDS
GATAATTCTATTGTGACTGA+TGG 0.498422 8_1:+5561728 Msa1174470:CDS
ATGAGCAAAATTAACCTCAC+TGG 0.501125 8_1:+5568082 Msa1174470:three_prime_UTR
TCGAAGTGTCACACTTAGTT+CGG 0.501489 8_1:+5561982 Msa1174470:CDS
ACGGCCACTGCTCCCTCCTC+TGG 0.501732 8_1:-5564437 None:intergenic
CTGTCATGTTGCAGGAAAGA+TGG 0.502399 8_1:+5561571 Msa1174470:CDS
GGATGCAAGATCAAAACTGC+TGG 0.507524 8_1:+5567945 Msa1174470:CDS
GTTTAGTGTCGGAAAGGATC+GGG 0.507850 8_1:+5563932 Msa1174470:CDS
ATCAAGCAAGATTCTGTGGA+TGG 0.509316 8_1:+5561413 Msa1174470:CDS
TAATTAAGTCTGTAGCGGTA+AGG 0.511934 8_1:-5564484 None:intergenic
GACAGGTCTGGCAGCTGGTG+TGG 0.512064 8_1:-5566933 None:intergenic
TCATAGTGAAATTTGGACAT+TGG 0.512902 8_1:+5561325 Msa1174470:CDS
AATTAAGTCTGTAGCGGTAA+GGG 0.514161 8_1:-5564483 None:intergenic
TGTAGCGGTAAGGGTTTCCT+CGG 0.514281 8_1:-5564474 None:intergenic
TGATGCTGGTGGCTCAGAAA+AGG 0.516790 8_1:+5568269 Msa1174470:three_prime_UTR
AGGGAGCAGTGGCCGTAGCT+GGG 0.517314 8_1:+5564444 Msa1174470:CDS
GTTAAGACAGGTCTGGCAGC+TGG 0.518162 8_1:-5566938 None:intergenic
AGAGTTGCTAGTGAATTCTT+CGG 0.519278 8_1:-5561857 None:intergenic
AGTGAATTCTTCGGAGTGGT+TGG 0.520843 8_1:-5561848 None:intergenic
TGGACATTGGATGTTGATCC+TGG 0.522650 8_1:+5561338 Msa1174470:CDS
GATAAACATGGCTTTGTCAC+AGG 0.523100 8_1:+5562247 Msa1174470:CDS
AATGATCTTTCAGCAACTGA+TGG 0.529089 8_1:+5567897 Msa1174470:intron
GAGTCCATATCCAGAATCAA+TGG 0.530332 8_1:-5562080 None:intergenic
ACAGCGATATATTTGGCATC+GGG 0.531978 8_1:-5562844 None:intergenic
AGCTTCAATTGCTTCAACAC+GGG 0.533328 8_1:-5562188 None:intergenic
TTCAATCAAGCAAGATTCTG+TGG 0.535136 8_1:+5561409 Msa1174470:CDS
TGAAAGCAATTATGCACTGA+AGG 0.536286 8_1:+5564406 Msa1174470:CDS
GTTGAAGCAATTGAAGCTCA+TGG 0.539923 8_1:+5562193 Msa1174470:CDS
AATTGAGCGGTCATGAGATC+CGG 0.540179 8_1:-5564063 None:intergenic
CATCTTTCCTGCAACATGAC+AGG 0.541618 8_1:-5561570 None:intergenic
ATAGAAAATGTCACTGAAGT+CGG 0.547137 8_1:-5566960 None:intergenic
GGACCACGACACGGAACGGA+AGG 0.548117 8_1:-5560206 None:intergenic
AACAGCGATATATTTGGCAT+CGG 0.548555 8_1:-5562845 None:intergenic
CGGTCCAGTTCAACAAGTCT+GGG 0.549117 8_1:+5561537 Msa1174470:CDS
TGTCAGGGCTAATACCCTGT+TGG 0.549353 8_1:+5568362 Msa1174470:three_prime_UTR
TCAAGCAAGATTCTGTGGAT+GGG 0.549521 8_1:+5561414 Msa1174470:CDS
TGTTTAGTGTCGGAAAGGAT+CGG 0.551127 8_1:+5563931 Msa1174470:CDS
TCACTGAAGTCGGTTAAGAC+AGG 0.552322 8_1:-5566950 None:intergenic
ACTCCTTCCGTTCCGTGTCG+TGG 0.553440 8_1:+5560203 Msa1174470:CDS
ACAAGTCCATACTTGTTAGT+GGG 0.553620 8_1:-5562118 None:intergenic
CAAGCAAGATTCTGTGGATG+GGG 0.554324 8_1:+5561415 Msa1174470:CDS
GAGTTCTACTCCATTGAAAG+TGG 0.554816 8_1:+5561908 Msa1174470:CDS
AGAAGGACCACGACACGGAA+CGG 0.556048 8_1:-5560210 None:intergenic
CTGTGATTACCAATTGAGAA+GGG 0.557042 8_1:-5560259 None:intergenic
TCTCGAGAGCTGGAGAGAGA+AGG 0.557092 8_1:-5560133 None:intergenic
CTCTCGAGAAAATCGGCGTA+TGG 0.558021 8_1:+5560147 Msa1174470:CDS
ATTGCTGGTGGTTATGGTGA+TGG 0.558530 8_1:+5560358 Msa1174470:CDS
GGGGAGTCTGTAAAGGATGG+TGG 0.560773 8_1:+5561434 Msa1174470:CDS
CAAATCCGCTTATGAATGGC+CGG 0.563016 8_1:+5565166 Msa1174470:CDS
AAAATATGGAATCCAAGCAC+TGG 0.566139 8_1:+5562043 Msa1174470:CDS
ACGAGGCCGACGGCTCGTAT+CGG 0.566937 8_1:-5560055 None:intergenic
GGAATATTACGCACTTGACC+AGG 0.569823 8_1:-5562319 None:intergenic
GCTTGTGGCCATACAATGAA+AGG 0.569849 8_1:-5563629 None:intergenic
GAACATAATCAGAAGGTGAC+CGG 0.571125 8_1:-5565185 None:intergenic
TGTTACGGGTTCTGCAGACA+AGG 0.571983 8_1:+5561373 Msa1174470:CDS
TGCTAGTGAATTCTTCGGAG+TGG 0.572514 8_1:-5561852 None:intergenic
GGTAGAAATATTCCGTGTGT+TGG 0.573652 8_1:+5561592 Msa1174470:CDS
ACACATTATGTGTTTAGTGT+CGG 0.574367 8_1:+5563921 Msa1174470:CDS
ACCGCGAAGACGAAAGAGAC+CGG 0.574420 8_1:-5560539 None:intergenic
AACATCTCATACGACAGCTC+CGG 0.574427 8_1:+5560104 Msa1174470:CDS
CATAGTCTTGACATTTGACA+CGG 0.577529 8_1:-5562785 None:intergenic
CACTGTATGCAAATTGTAGG+CGG 0.577657 8_1:+5561299 Msa1174470:CDS
CTCAATAATTAAGTCTGTAG+CGG 0.578373 8_1:-5564489 None:intergenic
AAAGCCATGTTTATCTGGCA+AGG 0.580945 8_1:-5562239 None:intergenic
TCTAACTGAGGCAGCAACAA+TGG 0.582775 8_1:+5560019 Msa1174470:exon
AATACCAGAGGAGGGAGCAG+TGG 0.584540 8_1:+5564433 Msa1174470:CDS
GGCGTATGGCACGTGCGACA+GGG 0.587169 8_1:+5560161 Msa1174470:CDS
ATTGACGTGACGGCGAGAGA+AGG 0.588228 8_1:-5560227 None:intergenic
ACTGTATGCAAATTGTAGGC+GGG 0.588325 8_1:+5561300 Msa1174470:CDS
GTATGAGATGTTGGAATCCA+CGG 0.589025 8_1:-5560093 None:intergenic
GGAAGATGCGATTGACGTGA+CGG 0.589585 8_1:-5560237 None:intergenic
GAAGTCGGTTAAGACAGGTC+TGG 0.591410 8_1:-5566945 None:intergenic
GGACTTGTTGGAACCAAAGA+GGG 0.592716 8_1:+5562133 Msa1174470:CDS
ACCTTAGAAATTATTGACAT+CGG 0.594571 8_1:+5562157 Msa1174470:CDS
ACTGTGATTACCAATTGAGA+AGG 0.595895 8_1:-5560260 None:intergenic
GCATGGCAAAGAGGCTACAG+AGG 0.596180 8_1:+5561673 Msa1174470:CDS
TTGTTGTTGTAGATTGCTGG+TGG 0.596677 8_1:+5560346 Msa1174470:intron
TGTGGATGGGGAGTCTGTAA+AGG 0.597183 8_1:+5561427 Msa1174470:CDS
AATGGAGATGCGGAGAACAA+AGG 0.597946 8_1:+5561704 Msa1174470:CDS
GATGGGGAGTCTGTAAAGGA+TGG 0.599140 8_1:+5561431 Msa1174470:CDS
TTATGTGTTTAGTGTCGGAA+AGG 0.600175 8_1:+5563926 Msa1174470:CDS
TGTATGGATATATCATCAGA+TGG 0.601371 8_1:+5563663 Msa1174470:CDS
GGATATGATCCATGGCTGCA+AGG 0.601974 8_1:-5567807 None:intergenic
GCACTTAGAACATAATCAGA+AGG 0.603480 8_1:-5565192 None:intergenic
AATGAATGATGATGTTCTTG+TGG 0.603575 8_1:+5562810 Msa1174470:CDS
TACACAGAACAGGCAGCTTG+TGG 0.607103 8_1:-5563644 None:intergenic
ACAAACCTGGATATGATCCA+TGG 0.607843 8_1:-5567815 None:intergenic
GAAGGAAGAAATACCAGAGG+AGG 0.611721 8_1:+5564424 Msa1174470:CDS
ATGACGCCGAACGAGGCCGA+CGG 0.612832 8_1:-5560065 None:intergenic
TACCAAATTAAGCAGAAACC+TGG 0.612981 8_1:+5562301 Msa1174470:CDS
AGGCCGACGGCTCGTATCGG+AGG 0.613902 8_1:-5560052 None:intergenic
GGAGCTGTCGTATGAGATGT+TGG 0.613973 8_1:-5560102 None:intergenic
GAGCTTCAATTGCTTCAACA+CGG 0.615221 8_1:-5562189 None:intergenic
TAAATTATTACTGATGCTGG+TGG 0.617793 8_1:+5568258 Msa1174470:three_prime_UTR
GATCCCAGCGGCGAATTGAG+CGG 0.618014 8_1:-5564076 None:intergenic
CAAAGCGTAAAGCCAAACGT+AGG 0.620404 8_1:+5561627 Msa1174470:CDS
GCTGCCTTGCCAGATAAACA+TGG 0.622045 8_1:+5562235 Msa1174470:CDS
CAAGTCCATACTTGTTAGTG+GGG 0.624870 8_1:-5562117 None:intergenic
CTTCGGCGTCATCCAACACA+CGG 0.626523 8_1:-5561604 None:intergenic
AGAGAAGAAGCATGGCAAAG+AGG 0.626627 8_1:+5561664 Msa1174470:CDS
AAGCAAAGATAGAGTTGCCA+CGG 0.629017 8_1:+5561517 Msa1174470:CDS
AAGCCATAAACCTCTAACTG+AGG 0.634623 8_1:+5560007 Msa1174470:five_prime_UTR
GGGAACTGAAAATGGAGATG+CGG 0.636136 8_1:+5561694 Msa1174470:CDS
GGAGGCGATGACGCCGAACG+AGG 0.636860 8_1:-5560072 None:intergenic
AAAGCGTAAAGCCAAACGTA+GGG 0.639491 8_1:+5561628 Msa1174470:CDS
TGGACTTGTTGGAACCAAAG+AGG 0.641769 8_1:+5562132 Msa1174470:CDS
TGGATGTTGATCCTGGTGAG+AGG 0.643191 8_1:+5561345 Msa1174470:CDS
GTAACAAGAAACCTCTCACC+AGG 0.643931 8_1:-5561356 None:intergenic
AAGGAAGAAATACCAGAGGA+GGG 0.645804 8_1:+5564425 Msa1174470:CDS
GTTCGGCGTCATCGCCTCCG+TGG 0.649223 8_1:+5560076 Msa1174470:CDS
GCGAGAGAAGGACCACGACA+CGG 0.656061 8_1:-5560215 None:intergenic
GCAACAGCAGTGTGCCTATG+CGG 0.658938 8_1:-5566886 None:intergenic
TGGTGGCTCAGAAAAGGTCA+GGG 0.659016 8_1:+5568275 Msa1174470:three_prime_UTR
GGTGACCGGCCATTCATAAG+CGG 0.664360 8_1:-5565171 None:intergenic
TGTGATTACCAATTGAGAAG+GGG 0.669898 8_1:-5560258 None:intergenic
CATGGCAAAGAGGCTACAGA+GGG 0.677642 8_1:+5561674 Msa1174470:CDS
AAGCTCATGGAGGCTCTGTG+CGG 0.686772 8_1:+5562206 Msa1174470:CDS
TTACCTCCGATACGAGCCGT+CGG 0.698710 8_1:+5560049 Msa1174470:CDS
TGACACTTCGAACATCAGAA+CGG 0.699354 8_1:-5561970 None:intergenic
AGACTTGTTGAACTGGACCG+TGG 0.700792 8_1:-5561534 None:intergenic
TGTCTTGCAGTCAGTAATCG+TGG 0.709915 8_1:+5564026 Msa1174470:CDS
ATGAAGATATCAACTTTACG+AGG 0.719564 8_1:-5568208 None:intergenic
GAAGCAATTGAAGCTCATGG+AGG 0.741210 8_1:+5562196 Msa1174470:CDS
ACTGAAGGAAGAAATACCAG+AGG 0.762552 8_1:+5564421 Msa1174470:CDS
TGAGATGTTGGAATCCACGG+AGG 0.765681 8_1:-5560090 None:intergenic
GCTCTTCAGTACGATCCCAG+CGG 0.811107 8_1:-5564088 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTGAAAACTTAATTAA+GGG - chr8_1:5560887-5560906 None:intergenic 10.0%
!! ATAGAATATATAAATATAGT+AGG - chr8_1:5562659-5562678 None:intergenic 10.0%
!! TGATAAAAATATAAAGATTT+GGG + chr8_1:5563710-5563729 Msa1174470:CDS 10.0%
!! GATTAAAAAAAATAATTATC+AGG - chr8_1:5563802-5563821 None:intergenic 10.0%
!!! TAATAATTTTACTGATATTT+GGG - chr8_1:5564972-5564991 None:intergenic 10.0%
!!! ATTTTTTTATTTTACATTTC+AGG + chr8_1:5565107-5565126 Msa1174470:intron 10.0%
!! AATAAATCCTAATAAAAATT+AGG - chr8_1:5565409-5565428 None:intergenic 10.0%
!! GAACAAAAAAAAATTAAATA+GGG - chr8_1:5567237-5567256 None:intergenic 10.0%
!! AGAACAAAAAAAAATTAAAT+AGG - chr8_1:5567238-5567257 None:intergenic 10.0%
!!! TATTTTAATTTAATCCAATA+CGG + chr8_1:5568333-5568352 Msa1174470:three_prime_UTR 10.0%
!! CTAAATTGAAAACTTAATTA+AGG - chr8_1:5560888-5560907 None:intergenic 15.0%
!!! CTTAATTAAGTTTTCAATTT+AGG + chr8_1:5560886-5560905 Msa1174470:intron 15.0%
!! AACAAATATTTCTTGAAATA+GGG - chr8_1:5562343-5562362 None:intergenic 15.0%
!! AAACAAATATTTCTTGAAAT+AGG - chr8_1:5562344-5562363 None:intergenic 15.0%
!!! TTTTTTTATAAGGAAATACA+AGG + chr8_1:5562364-5562383 Msa1174470:intron 15.0%
!! AATATAAAACAGAAAAACTA+TGG - chr8_1:5562487-5562506 None:intergenic 15.0%
!!! AAATAGAAATTTTAAACACT+TGG + chr8_1:5562544-5562563 Msa1174470:intron 15.0%
!!! AATAGAAATTTTAAACACTT+GGG + chr8_1:5562545-5562564 Msa1174470:intron 15.0%
!! CTGATAAAAATATAAAGATT+TGG + chr8_1:5563709-5563728 Msa1174470:CDS 15.0%
!! GATAAAAATATAAAGATTTG+GGG + chr8_1:5563711-5563730 Msa1174470:CDS 15.0%
!!! GTAATAATTTTACTGATATT+TGG - chr8_1:5564973-5564992 None:intergenic 15.0%
!! AAAAATTCTTCAATTCAATT+TGG + chr8_1:5565008-5565027 Msa1174470:intron 15.0%
!! AAAATTCTTCAATTCAATTT+GGG + chr8_1:5565009-5565028 Msa1174470:intron 15.0%
!!! ACTTTTCTTAATAATTTCAT+TGG + chr8_1:5565368-5565387 Msa1174470:intron 15.0%
!! CAATAATATTTACATCTATT+AGG - chr8_1:5565571-5565590 None:intergenic 15.0%
!! ATTCTTCGATTATAAATTTA+AGG - chr8_1:5566489-5566508 None:intergenic 15.0%
!! ATTTATAATCGAAGAATATA+AGG + chr8_1:5566492-5566511 Msa1174470:intron 15.0%
!! TTAACCAAATCTTAAAAAAT+CGG - chr8_1:5566801-5566820 None:intergenic 15.0%
!!! AATACCTTTTTTTCTAAAAT+AGG + chr8_1:5567319-5567338 Msa1174470:intron 15.0%
!!! ATACCTTTTTTTCTAAAATA+GGG + chr8_1:5567320-5567339 Msa1174470:intron 15.0%
!! TTTAAATTGTTCTATCCAAA+CGG - chr8_1:5560914-5560933 None:intergenic 20.0%
!! TACTCTCAAAAATTTATCTT+TGG - chr8_1:5561261-5561280 None:intergenic 20.0%
!!! AAGATAAATTTTTGAGAGTA+TGG + chr8_1:5561261-5561280 Msa1174470:CDS 20.0%
!!! AGATAAATTTTTGAGAGTAT+GGG + chr8_1:5561262-5561281 Msa1174470:CDS 20.0%
!!! ACTGTTTTATTTGTTTCTAT+GGG - chr8_1:5561755-5561774 None:intergenic 20.0%
!!! AACTGTTTTATTTGTTTCTA+TGG - chr8_1:5561756-5561775 None:intergenic 20.0%
!! GATGAAATACAATAAACAAA+AGG - chr8_1:5562450-5562469 None:intergenic 20.0%
!! TTTGTTTATTGTATTTCATC+TGG + chr8_1:5562450-5562469 Msa1174470:intron 20.0%
!!! AAAACTCATCAAGAAAATTT+TGG - chr8_1:5562928-5562947 None:intergenic 20.0%
!!! ATACATATTTTACCATATGT+TGG + chr8_1:5563008-5563027 Msa1174470:intron 20.0%
!! TTTATAAATGTGTATGTGTA+TGG + chr8_1:5563261-5563280 Msa1174470:intron 20.0%
!! AACAAGATCAAAATTCAATT+GGG - chr8_1:5563503-5563522 None:intergenic 20.0%
!! AAACAAGATCAAAATTCAAT+TGG - chr8_1:5563504-5563523 None:intergenic 20.0%
!!! ATTGAATTTTGATCTTGTTT+TGG + chr8_1:5563504-5563523 Msa1174470:intron 20.0%
!!! TTAATCTCTTTTATTCATCA+AGG + chr8_1:5563816-5563835 Msa1174470:intron 20.0%
!! CAATATATCAGTTTAGAAAA+CGG - chr8_1:5564589-5564608 None:intergenic 20.0%
!!! TTTTTATTTTACATTTCAGG+AGG + chr8_1:5565110-5565129 Msa1174470:intron 20.0%
!!! TATATTTCTGCATAAGAATT+GGG - chr8_1:5565293-5565312 None:intergenic 20.0%
!!! TTATATTTCTGCATAAGAAT+TGG - chr8_1:5565294-5565313 None:intergenic 20.0%
!!! AAACCTACCTAATTTTTATT+AGG + chr8_1:5565399-5565418 Msa1174470:intron 20.0%
!! AATCCTAATAAAAATTAGGT+AGG - chr8_1:5565405-5565424 None:intergenic 20.0%
!! GATATTTAACATAATAGAGT+TGG - chr8_1:5565486-5565505 None:intergenic 20.0%
!! TTACATCTATTAGGTTAATT+TGG - chr8_1:5565562-5565581 None:intergenic 20.0%
!! AACATTGATCATAAGTTAAA+GGG + chr8_1:5565899-5565918 Msa1174470:intron 20.0%
!!! CTTTTCTGTATAAAAAAACT+TGG + chr8_1:5566346-5566365 Msa1174470:intron 20.0%
!! TAATATGAACAAACATTCTT+TGG - chr8_1:5566380-5566399 None:intergenic 20.0%
!! GGAAAAACATAACTAAAATT+AGG - chr8_1:5566585-5566604 None:intergenic 20.0%
!! ATTATTACAAGAGAAATACA+CGG - chr8_1:5566767-5566786 None:intergenic 20.0%
!!! AGTTTGAACCTTTTTTTTTA+GGG + chr8_1:5567163-5567182 Msa1174470:intron 20.0%
!! ATATGTAACCCTAAAAAAAA+AGG - chr8_1:5567174-5567193 None:intergenic 20.0%
!! TTAGTCCCTATAATAAAATT+GGG - chr8_1:5567362-5567381 None:intergenic 20.0%
!! ACTAACAATATATTTAACCA+AGG + chr8_1:5567377-5567396 Msa1174470:intron 20.0%
!! CTAACAATATATTTAACCAA+GGG + chr8_1:5567378-5567397 Msa1174470:intron 20.0%
!! TAACAATATATTTAACCAAG+GGG + chr8_1:5567379-5567398 Msa1174470:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr8_1:5567592-5567611 Msa1174470:intron 20.0%
!! TATTAAATTATTACTGATGC+TGG + chr8_1:5568255-5568274 Msa1174470:three_prime_UTR 20.0%
! GAATTTACGATTTCCTTTAA+CGG + chr8_1:5560306-5560325 Msa1174470:intron 25.0%
!!! AAGATAACGATGTTATTTTG+TGG + chr8_1:5560500-5560519 Msa1174470:CDS 25.0%
!!! AGATAACGATGTTATTTTGT+GGG + chr8_1:5560501-5560520 Msa1174470:CDS 25.0%
! TTAAATTGTTCTATCCAAAC+GGG - chr8_1:5560913-5560932 None:intergenic 25.0%
! CTTGCTTGATTGAATAAAAA+CGG - chr8_1:5561403-5561422 None:intergenic 25.0%
! CTCGATTAGATTATTGTTTA+AGG - chr8_1:5561891-5561910 None:intergenic 25.0%
!!! ATCAATACCAAGTGTTTTTT+TGG - chr8_1:5561939-5561958 None:intergenic 25.0%
! ACCTTAGAAATTATTGACAT+CGG + chr8_1:5562157-5562176 Msa1174470:CDS 25.0%
!! AAGATCATGATGTAAAGTTT+TGG + chr8_1:5562275-5562294 Msa1174470:CDS 25.0%
!! AGATCATGATGTAAAGTTTT+GGG + chr8_1:5562276-5562295 Msa1174470:CDS 25.0%
!! AGTCATTCTTATTTAATACG+TGG + chr8_1:5562680-5562699 Msa1174470:intron 25.0%
! TTATTAACACTACTTGTCTT+TGG + chr8_1:5562899-5562918 Msa1174470:intron 25.0%
!!! TTTTTGGGGACTATAATAAT+TGG + chr8_1:5563137-5563156 Msa1174470:intron 25.0%
! ATTGACAACTTTACTGAATA+TGG + chr8_1:5563170-5563189 Msa1174470:intron 25.0%
!! TTTCTGAAAAAAGTTAGAAG+CGG + chr8_1:5563295-5563314 Msa1174470:intron 25.0%
! TTAAAAGAATTGTGTATCAC+TGG - chr8_1:5563362-5563381 None:intergenic 25.0%
! GAGAAATAAATGAACCAATT+TGG - chr8_1:5563422-5563441 None:intergenic 25.0%
!! AAATAATGCAAGAGTATAAG+AGG - chr8_1:5563535-5563554 None:intergenic 25.0%
! AAATTCTTCCTTTCATTGTA+TGG + chr8_1:5563621-5563640 Msa1174470:CDS 25.0%
!! AAATATAAAGATTTGGGGTT+TGG + chr8_1:5563716-5563735 Msa1174470:CDS 25.0%
!!! CAATTTACTTTTCAGTGTTA+TGG + chr8_1:5563878-5563897 Msa1174470:intron 25.0%
!!! TATGCATAACTTTTAGGTTA+TGG + chr8_1:5564126-5564145 Msa1174470:intron 25.0%
! TGTTAATGTGAATTGTTTGT+TGG + chr8_1:5564281-5564300 Msa1174470:intron 25.0%
!!! CGATAAATCATTTTAATTGC+AGG + chr8_1:5564328-5564347 Msa1174470:intron 25.0%
!!! ATTTTAATTGCAGGAAGAAA+AGG + chr8_1:5564337-5564356 Msa1174470:intron 25.0%
! TAGTAATTCTTTGCAAAACA+TGG + chr8_1:5564686-5564705 Msa1174470:intron 25.0%
! TTGGTGCATTCTAATTTATT+TGG - chr8_1:5564731-5564750 None:intergenic 25.0%
!! TTGATGGAAAAATTTGTTTG+GGG - chr8_1:5564768-5564787 None:intergenic 25.0%
!! CTTGATGGAAAAATTTGTTT+GGG - chr8_1:5564769-5564788 None:intergenic 25.0%
! GATAGCAGTAGTTAATTAAT+AGG - chr8_1:5564834-5564853 None:intergenic 25.0%
!!! GTCTTGTTTATAAGGAATAA+AGG - chr8_1:5565436-5565455 None:intergenic 25.0%
!!! TCATCATAGTCTTGTTTATA+AGG - chr8_1:5565444-5565463 None:intergenic 25.0%
! TATAAACAAGACTATGATGA+AGG + chr8_1:5565444-5565463 Msa1174470:intron 25.0%
! CTCTATTATGTTAAATATCC+TGG + chr8_1:5565487-5565506 Msa1174470:intron 25.0%
! TGTAAATATTATTGTGCTCA+AGG + chr8_1:5565577-5565596 Msa1174470:intron 25.0%
! GTAAATATTATTGTGCTCAA+GGG + chr8_1:5565578-5565597 Msa1174470:intron 25.0%
! GGTATTTAACATAATAGAGT+CGG + chr8_1:5565599-5565618 Msa1174470:intron 25.0%
! CAACATTGATCATAAGTTAA+AGG + chr8_1:5565898-5565917 Msa1174470:intron 25.0%
! ACATTGATCATAAGTTAAAG+GGG + chr8_1:5565900-5565919 Msa1174470:intron 25.0%
!! AATAAGCATTTTGCAATACT+AGG + chr8_1:5566059-5566078 Msa1174470:intron 25.0%
! AACATAACTAAAATTAGGTC+AGG - chr8_1:5566580-5566599 None:intergenic 25.0%
! CAAGTTTAATGTATTTATGC+AGG + chr8_1:5566638-5566657 Msa1174470:intron 25.0%
!! TTTTGTCATACTTGAAAGAA+TGG + chr8_1:5566688-5566707 Msa1174470:CDS 25.0%
!!! ATAGCCGATTTTTTAAGATT+TGG + chr8_1:5566794-5566813 Msa1174470:intron 25.0%
!!! CAATGTTTTGATAACTTGAT+TGG + chr8_1:5567039-5567058 Msa1174470:intron 25.0%
! ATGTGAAAACTATTGAAAGT+AGG + chr8_1:5567109-5567128 Msa1174470:intron 25.0%
! CTAAAAAAAAAGGTTCAAAC+TGG - chr8_1:5567164-5567183 None:intergenic 25.0%
!!! CAGTTTGAACCTTTTTTTTT+AGG + chr8_1:5567162-5567181 Msa1174470:intron 25.0%
!!! ATTTTTTGTCCCTACAAAAT+TGG + chr8_1:5567194-5567213 Msa1174470:intron 25.0%
!!! TTTTTTGTCCCTACAAAATT+GGG + chr8_1:5567195-5567214 Msa1174470:intron 25.0%
!!! AGTCCCTATTTTAGAAAAAA+AGG - chr8_1:5567326-5567345 None:intergenic 25.0%
!! AAGGTCCCAATTTTATTATA+GGG + chr8_1:5567354-5567373 Msa1174470:intron 25.0%
! GTTAGTCCCTATAATAAAAT+TGG - chr8_1:5567363-5567382 None:intergenic 25.0%
! AACAATATATTTAACCAAGG+GGG + chr8_1:5567380-5567399 Msa1174470:intron 25.0%
! AACTATTAGGAAAGATTTAG+AGG + chr8_1:5567605-5567624 Msa1174470:intron 25.0%
! AGATTTAGAGGTTAATGAAT+TGG + chr8_1:5567617-5567636 Msa1174470:intron 25.0%
! TAATGAATTGGATCCAAAAA+TGG + chr8_1:5567629-5567648 Msa1174470:intron 25.0%
!! GTTCTATCATAAACCATTTT+TGG - chr8_1:5567645-5567664 None:intergenic 25.0%
!! TTCAAACAAGAATTTTGTCA+AGG - chr8_1:5567750-5567769 None:intergenic 25.0%
!! AGATTCTTTTTATACAAACC+TGG - chr8_1:5567831-5567850 None:intergenic 25.0%
! CATTGATAGAAAAGCTAATT+CGG + chr8_1:5567868-5567887 Msa1174470:intron 25.0%
! GATATATATATATTCCAGTG+AGG - chr8_1:5568099-5568118 None:intergenic 25.0%
! TTATCATTCTCTTTCACTAA+AGG - chr8_1:5568162-5568181 None:intergenic 25.0%
!! AAAATTTTTACTCACCAACA+GGG - chr8_1:5568379-5568398 None:intergenic 25.0%
! AGGGTTTATGTTTCTGAATT+CGG - chr8_1:5559981-5560000 None:intergenic 30.0%
AAGAACTGTTAAACCGTTAA+AGG - chr8_1:5560322-5560341 None:intergenic 30.0%
ACTTGTGAAACTACTTTGAA+TGG + chr8_1:5560412-5560431 Msa1174470:CDS 30.0%
ACTACTTTGAATGGACATAA+AGG + chr8_1:5560421-5560440 Msa1174470:CDS 30.0%
GAATTGAAGAAGAGTAAAAG+AGG - chr8_1:5560580-5560599 None:intergenic 30.0%
ATTAAACTGTTAGTCCAAAC+GGG - chr8_1:5560626-5560645 None:intergenic 30.0%
GATTAAACTGTTAGTCCAAA+CGG - chr8_1:5560627-5560646 None:intergenic 30.0%
ATGAAAACAACGTATAGCTT+AGG - chr8_1:5560730-5560749 None:intergenic 30.0%
TAAATTGTTCTATCCAAACG+GGG - chr8_1:5560912-5560931 None:intergenic 30.0%
AAATAAGTGCTTATAGCGTA+AGG + chr8_1:5560931-5560950 Msa1174470:intron 30.0%
AATAAGTGCTTATAGCGTAA+GGG + chr8_1:5560932-5560951 Msa1174470:intron 30.0%
TAAGCTCTATAGAATAGCTT+AGG - chr8_1:5561054-5561073 None:intergenic 30.0%
!!! ATGTTGTTTTTGTTGGTTCT+GGG + chr8_1:5561216-5561235 Msa1174470:CDS 30.0%
TCATAGTGAAATTTGGACAT+TGG + chr8_1:5561325-5561344 Msa1174470:CDS 30.0%
ATTCTTCCGTTTCAAACAAA+TGG + chr8_1:5561459-5561478 Msa1174470:CDS 30.0%
TTCTTCCGTTTCAAACAAAT+GGG + chr8_1:5561460-5561479 Msa1174470:CDS 30.0%
AACATCCCATTTGTTTGAAA+CGG - chr8_1:5561468-5561487 None:intergenic 30.0%
!!! CATGCTTCTTCTCTTTTTTA+CGG - chr8_1:5561658-5561677 None:intergenic 30.0%
GATAATTCTATTGTGACTGA+TGG + chr8_1:5561728-5561747 Msa1174470:CDS 30.0%
CAGTTTAAAAACATCAGGTA+CGG - chr8_1:5561780-5561799 None:intergenic 30.0%
TGCAACAGTTTAAAAACATC+AGG - chr8_1:5561785-5561804 None:intergenic 30.0%
!! TATTTTTACTGCATTGTGAC+TGG - chr8_1:5562029-5562048 None:intergenic 30.0%
GTCACAATGCAGTAAAAATA+TGG + chr8_1:5562029-5562048 Msa1174470:CDS 30.0%
TCCGATGTCAATAATTTCTA+AGG - chr8_1:5562161-5562180 None:intergenic 30.0%
CTGTATGTGAAGTGAAAAAA+AGG - chr8_1:5562395-5562414 None:intergenic 30.0%
AACACTAATTGTTCTGTTTC+AGG + chr8_1:5562747-5562766 Msa1174470:intron 30.0%
! AATGAATGATGATGTTCTTG+TGG + chr8_1:5562810-5562829 Msa1174470:CDS 30.0%
!!! AGCTTGCATAGATTGTTTTT+TGG + chr8_1:5563121-5563140 Msa1174470:intron 30.0%
!!! GCTTGCATAGATTGTTTTTT+GGG + chr8_1:5563122-5563141 Msa1174470:intron 30.0%
!!! CTTGCATAGATTGTTTTTTG+GGG + chr8_1:5563123-5563142 Msa1174470:intron 30.0%
GTGTATGTGTATGGATAAAT+TGG + chr8_1:5563270-5563289 Msa1174470:intron 30.0%
!!! GCTTCTAACTTTTTTCAGAA+AGG - chr8_1:5563296-5563315 None:intergenic 30.0%
GAAATGCCAATTTCAAAGTA+TGG + chr8_1:5563461-5563480 Msa1174470:intron 30.0%
!!! GAATTTTGATCTTGTTTTGG+TGG + chr8_1:5563507-5563526 Msa1174470:intron 30.0%
TGTATGGATATATCATCAGA+TGG + chr8_1:5563663-5563682 Msa1174470:CDS 30.0%
! CTTTTATTCATCAAGGAGTA+TGG + chr8_1:5563823-5563842 Msa1174470:intron 30.0%
CTAAACACATAATGTGTCTT+GGG - chr8_1:5563918-5563937 None:intergenic 30.0%
ACTAAACACATAATGTGTCT+TGG - chr8_1:5563919-5563938 None:intergenic 30.0%
ACACATTATGTGTTTAGTGT+CGG + chr8_1:5563921-5563940 Msa1174470:CDS 30.0%
! TTGAGGTATGCATAACTTTT+AGG + chr8_1:5564120-5564139 Msa1174470:intron 30.0%
AAATGTGAATGAATACCCTA+AGG + chr8_1:5564199-5564218 Msa1174470:intron 30.0%
TTCTTTAAGCAATGTCCTTA+GGG - chr8_1:5564217-5564236 None:intergenic 30.0%
ATTCTTTAAGCAATGTCCTT+AGG - chr8_1:5564218-5564237 None:intergenic 30.0%
CTCAATAATTAAGTCTGTAG+CGG - chr8_1:5564492-5564511 None:intergenic 30.0%
GCAAAACATGGATATCAATT+TGG + chr8_1:5564698-5564717 Msa1174470:intron 30.0%
GTGCATTCTAATTTATTTGG+AGG - chr8_1:5564728-5564747 None:intergenic 30.0%
! GCTTGATGGAAAAATTTGTT+TGG - chr8_1:5564770-5564789 None:intergenic 30.0%
GAAAATTGTTCCAATTTCAC+AGG - chr8_1:5564802-5564821 None:intergenic 30.0%
TTACGAAACAAGATACAAGA+CGG - chr8_1:5565066-5565085 None:intergenic 30.0%
!! TTATTTTACATTTCAGGAGG+AGG + chr8_1:5565113-5565132 Msa1174470:intron 30.0%
!!! CAATAAAAATGCTGTTTTCC+AGG + chr8_1:5565143-5565162 Msa1174470:CDS 30.0%
TGCAGAAATATAACACATGT+CGG + chr8_1:5565301-5565320 Msa1174470:intron 30.0%
GACTATGATGAAGGTTAATA+TGG + chr8_1:5565453-5565472 Msa1174470:intron 30.0%
GTATGTGTATGTGTGATTTA+TGG + chr8_1:5565816-5565835 Msa1174470:intron 30.0%
AATTTGCAGTATCTGTGATT+AGG + chr8_1:5565942-5565961 Msa1174470:intron 30.0%
AATAAGCATCTTGCAATACT+CGG + chr8_1:5565992-5566011 Msa1174470:intron 30.0%
TAGTAACAGGGTTTAGAAAA+GGG - chr8_1:5566320-5566339 None:intergenic 30.0%
! TTTTCTAAACCCTGTTACTA+GGG + chr8_1:5566320-5566339 Msa1174470:intron 30.0%
ATGGACTTCATATTCTGATA+AGG + chr8_1:5566707-5566726 Msa1174470:CDS 30.0%
AATCTATTCATGATAACTGC+AGG + chr8_1:5566850-5566869 Msa1174470:intron 30.0%
ATAGAAAATGTCACTGAAGT+CGG - chr8_1:5566963-5566982 None:intergenic 30.0%
!! TTTTGATAACTTGATTGGAC+CGG + chr8_1:5567044-5567063 Msa1174470:intron 30.0%
! TTTTTGTCCCTACAAAATTG+GGG + chr8_1:5567196-5567215 Msa1174470:intron 30.0%
AAATAGGGACTAAACATGAA+AGG - chr8_1:5567222-5567241 None:intergenic 30.0%
TATCCATTTCCTACAACATT+AGG + chr8_1:5567263-5567282 Msa1174470:intron 30.0%
TTTCCTAATGTTGTAGGAAA+TGG - chr8_1:5567269-5567288 None:intergenic 30.0%
TATGCATTTCCTAATGTTGT+AGG - chr8_1:5567275-5567294 None:intergenic 30.0%
ATGCATAAGAAATAGATACG+AGG + chr8_1:5567288-5567307 Msa1174470:intron 30.0%
! TCTAAAATAGGGACTAAACT+TGG + chr8_1:5567331-5567350 Msa1174470:intron 30.0%
! GAAGGTCCCAATTTTATTAT+AGG + chr8_1:5567353-5567372 Msa1174470:intron 30.0%
AGTACGAATAGTAGATCAAA+TGG + chr8_1:5567531-5567550 Msa1174470:intron 30.0%
!!! CGAATTAGCTTTTCTATCAA+TGG - chr8_1:5567870-5567889 None:intergenic 30.0%
AATCCAAACGTTTACAAGAT+AGG + chr8_1:5567983-5568002 Msa1174470:CDS 30.0%
AAAGTAATCTGTCAGTGATA+TGG + chr8_1:5568047-5568066 Msa1174470:exon 30.0%
AAGTAATCTGTCAGTGATAT+GGG + chr8_1:5568048-5568067 Msa1174470:exon 30.0%
ATGAAGATATCAACTTTACG+AGG - chr8_1:5568211-5568230 None:intergenic 30.0%
!! ATCTTCATTTTTGAGAAGCA+AGG + chr8_1:5568223-5568242 Msa1174470:three_prime_UTR 30.0%
TAAATTATTACTGATGCTGG+TGG + chr8_1:5568258-5568277 Msa1174470:three_prime_UTR 30.0%
! GAAAATTTTTACTCACCAAC+AGG - chr8_1:5568380-5568399 None:intergenic 30.0%
TGTGATTACCAATTGAGAAG+GGG - chr8_1:5560261-5560280 None:intergenic 35.0%
CTGTGATTACCAATTGAGAA+GGG - chr8_1:5560262-5560281 None:intergenic 35.0%
ACTGTGATTACCAATTGAGA+AGG - chr8_1:5560263-5560282 None:intergenic 35.0%
! TTGTTGTTGTTGTAGATTGC+TGG + chr8_1:5560343-5560362 Msa1174470:intron 35.0%
GCTCTTCGTTATAATAAGCT+TGG + chr8_1:5560454-5560473 Msa1174470:CDS 35.0%
!! GTTATTTTGTGGGATGTTGT+TGG + chr8_1:5560511-5560530 Msa1174470:CDS 35.0%
! GTTTTCAATTTAGACCCGTT+TGG + chr8_1:5560609-5560628 Msa1174470:intron 35.0%
ATAAGCAAACGCAGACTATT+TGG - chr8_1:5560827-5560846 None:intergenic 35.0%
! ATTAAGGGCATGTTCAGATT+TGG - chr8_1:5560872-5560891 None:intergenic 35.0%
GAAACAACTTATACCTCATG+TGG - chr8_1:5561032-5561051 None:intergenic 35.0%
AGACTATTTGAAAGAGCTGA+TGG - chr8_1:5561092-5561111 None:intergenic 35.0%
ACTTATTTGATCTCACCTAC+TGG - chr8_1:5561129-5561148 None:intergenic 35.0%
AAGTCAATTCAAACAGAGCT+TGG + chr8_1:5561145-5561164 Msa1174470:intron 35.0%
AACGAGTTTGTGTTCATTTG+TGG + chr8_1:5561183-5561202 Msa1174470:intron 35.0%
!!! GTGACTGATGTTGTTTTTGT+TGG + chr8_1:5561209-5561228 Msa1174470:CDS 35.0%
!!! GATGTTGTTTTTGTTGGTTC+TGG + chr8_1:5561215-5561234 Msa1174470:CDS 35.0%
TTCAATCAAGCAAGATTCTG+TGG + chr8_1:5561409-5561428 Msa1174470:CDS 35.0%
CGTAAAAAAGAGAAGAAGCA+TGG + chr8_1:5561656-5561675 Msa1174470:CDS 35.0%
AGTGGTTGGACAAAAAGAAA+TGG - chr8_1:5561837-5561856 None:intergenic 35.0%
AGAGTTGCTAGTGAATTCTT+CGG - chr8_1:5561860-5561879 None:intergenic 35.0%
! TTTGGTTTCACCACTTTCAA+TGG - chr8_1:5561921-5561940 None:intergenic 35.0%
GGTGAAACCAAAAAAACACT+TGG + chr8_1:5561929-5561948 Msa1174470:CDS 35.0%
!! ACACTTGGTATTGATCTTGA+AGG + chr8_1:5561944-5561963 Msa1174470:CDS 35.0%
AAAATATGGAATCCAAGCAC+TGG + chr8_1:5562043-5562062 Msa1174470:CDS 35.0%
! ACAAGTCCATACTTGTTAGT+GGG - chr8_1:5562121-5562140 None:intergenic 35.0%
! AACAAGTCCATACTTGTTAG+TGG - chr8_1:5562122-5562141 None:intergenic 35.0%
ACTAACAAGTATGGACTTGT+TGG + chr8_1:5562121-5562140 Msa1174470:CDS 35.0%
!! AATTTCTAAGGTTCCCTCTT+TGG - chr8_1:5562149-5562168 None:intergenic 35.0%
TACCAAATTAAGCAGAAACC+TGG + chr8_1:5562301-5562320 Msa1174470:CDS 35.0%
TGATAGCATACGTAAACGTA+TGG + chr8_1:5562420-5562439 Msa1174470:intron 35.0%
!! TTGATCTCTAGAACTAGAAG+TGG + chr8_1:5562506-5562525 Msa1174470:intron 35.0%
! CATAGTCTTGACATTTGACA+CGG - chr8_1:5562788-5562807 None:intergenic 35.0%
AACAGCGATATATTTGGCAT+CGG - chr8_1:5562848-5562867 None:intergenic 35.0%
TCTGTTGGATAGTACTGTTA+AGG + chr8_1:5562870-5562889 Msa1174470:CDS 35.0%
!!! TGCATTTTGAGGTTGAAAAG+TGG - chr8_1:5562976-5562995 None:intergenic 35.0%
! CATTGACAACATGCATTTTG+AGG - chr8_1:5562987-5563006 None:intergenic 35.0%
TTTACCATATGTTGGCAATC+TGG + chr8_1:5563016-5563035 Msa1174470:intron 35.0%
TTACCATATGTTGGCAATCT+GGG + chr8_1:5563017-5563036 Msa1174470:intron 35.0%
TTGTAGATTTGAGTGAAGCT+TGG + chr8_1:5563068-5563087 Msa1174470:intron 35.0%
TGTAGATTTGAGTGAAGCTT+GGG + chr8_1:5563069-5563088 Msa1174470:intron 35.0%
TTACTGAATATGGCCTAGTT+TGG + chr8_1:5563180-5563199 Msa1174470:intron 35.0%
CCAATTTGGATAAACTTCTC+AGG - chr8_1:5563408-5563427 None:intergenic 35.0%
CCTGAGAAGTTTATCCAAAT+TGG + chr8_1:5563405-5563424 Msa1174470:intron 35.0%
CTCATTACGCTACATCTAAT+AGG + chr8_1:5563439-5563458 Msa1174470:intron 35.0%
TCAATTGGGAACATACAGAT+GGG - chr8_1:5563489-5563508 None:intergenic 35.0%
TTCAATTGGGAACATACAGA+TGG - chr8_1:5563490-5563509 None:intergenic 35.0%
GATATATCCATACACAGAAC+AGG - chr8_1:5563657-5563676 None:intergenic 35.0%
GATGGAGATTTAATTGTGAC+TGG + chr8_1:5563681-5563700 Msa1174470:CDS 35.0%
!! AAGATTTGGGGTTTGGATTT+TGG + chr8_1:5563723-5563742 Msa1174470:CDS 35.0%
! TTATGTGTTTAGTGTCGGAA+AGG + chr8_1:5563926-5563945 Msa1174470:CDS 35.0%
AAGGACATCATGCAGATATT+TGG + chr8_1:5564003-5564022 Msa1174470:CDS 35.0%
! TGAAGAGCAGTTTTTCATTG+AGG + chr8_1:5564103-5564122 Msa1174470:CDS 35.0%
TTTGCCATTGTAAGAGACAA+TGG - chr8_1:5564182-5564201 None:intergenic 35.0%
TGGTAAAAGACTTAGTTCAC+TGG + chr8_1:5564301-5564320 Msa1174470:intron 35.0%
AGAAAAGGAGAAAAGGTTAG+AGG + chr8_1:5564352-5564371 Msa1174470:CDS 35.0%
TGAAAGCAATTATGCACTGA+AGG + chr8_1:5564406-5564425 Msa1174470:CDS 35.0%
AATTAAGTCTGTAGCGGTAA+GGG - chr8_1:5564486-5564505 None:intergenic 35.0%
TAATTAAGTCTGTAGCGGTA+AGG - chr8_1:5564487-5564506 None:intergenic 35.0%
TGTCTCATAAGTAAATCTGC+AGG + chr8_1:5564607-5564626 Msa1174470:intron 35.0%
GTCTCTTAAGCAGATTATAC+AGG - chr8_1:5564661-5564680 None:intergenic 35.0%
! CAATTTGAAGCCTGTGAAAT+TGG + chr8_1:5564789-5564808 Msa1174470:intron 35.0%
! TCAATGGGGTTCAATGTTTT+GGG - chr8_1:5564936-5564955 None:intergenic 35.0%
CTAGATAACTAAAAGAGCTG+AGG + chr8_1:5565036-5565055 Msa1174470:intron 35.0%
! GTCTTGTATCTTGTTTCGTA+AGG + chr8_1:5565065-5565084 Msa1174470:intron 35.0%
GCACTTAGAACATAATCAGA+AGG - chr8_1:5565195-5565214 None:intergenic 35.0%
AGATGTTCACTCGAATGATT+TGG + chr8_1:5565221-5565240 Msa1174470:CDS 35.0%
! TGATTTGGAGCAAACATTGT+TGG + chr8_1:5565236-5565255 Msa1174470:CDS 35.0%
GCAAACATTGTTGGTATGTT+TGG + chr8_1:5565245-5565264 Msa1174470:intron 35.0%
ACATGTCGGACTAATTTCTT+TGG + chr8_1:5565315-5565334 Msa1174470:intron 35.0%
CATGTCGGACTAATTTCTTT+GGG + chr8_1:5565316-5565335 Msa1174470:intron 35.0%
CAGTATCTGTGATTAGGTAT+AGG + chr8_1:5565948-5565967 Msa1174470:intron 35.0%
CAATACTAGGATGTCAATAG+CGG + chr8_1:5566072-5566091 Msa1174470:intron 35.0%
TGTCAATCATGGATAGATGA+AGG - chr8_1:5566237-5566256 None:intergenic 35.0%
TTAGCATGCATTTACAAGCT+AGG - chr8_1:5566261-5566280 None:intergenic 35.0%
! ATTGAGGGTGGATTTATTGT+AGG - chr8_1:5566289-5566308 None:intergenic 35.0%
TACAATAAATCCACCCTCAA+TGG + chr8_1:5566288-5566307 Msa1174470:intron 35.0%
CTAGTAACAGGGTTTAGAAA+AGG - chr8_1:5566321-5566340 None:intergenic 35.0%
! CTTTTCTAAACCCTGTTACT+AGG + chr8_1:5566319-5566338 Msa1174470:intron 35.0%
! AAATGCTTCTGCTTTCTAGT+GGG - chr8_1:5566557-5566576 None:intergenic 35.0%
! AGCTTCAAAGCATCTGAAAA+AGG - chr8_1:5566669-5566688 None:intergenic 35.0%
! CATTTTCTATGAGAGAGTCA+AGG + chr8_1:5566973-5566992 Msa1174470:CDS 35.0%
TCAAGGTAAATATGCAAACG+AGG + chr8_1:5566990-5567009 Msa1174470:intron 35.0%
TAAATATGCAAACGAGGTCA+AGG + chr8_1:5566996-5567015 Msa1174470:intron 35.0%
AAATTGTTTGAGTGACTGAC+TGG - chr8_1:5567088-5567107 None:intergenic 35.0%
TAGGAATCACCCATTAAAAG+AGG + chr8_1:5567128-5567147 Msa1174470:intron 35.0%
! ACTTAGCCACCTCTTTTAAT+GGG - chr8_1:5567140-5567159 None:intergenic 35.0%
! TACTTAGCCACCTCTTTTAA+TGG - chr8_1:5567141-5567160 None:intergenic 35.0%
AAATAGGGACTAAACTTGGA+AGG + chr8_1:5567335-5567354 Msa1174470:intron 35.0%
TCTACATGTCTTCTCTGTAT+AGG - chr8_1:5567505-5567524 None:intergenic 35.0%
ACGAATAGTAGATCAAATGG+AGG + chr8_1:5567534-5567553 Msa1174470:intron 35.0%
! TGGTTGTTGTTGTACTCTTA+TGG + chr8_1:5567717-5567736 Msa1174470:intron 35.0%
! TCTTGTTTGAACCTTGTATC+AGG + chr8_1:5567759-5567778 Msa1174470:intron 35.0%
CTTGTTTGAACCTTGTATCA+GGG + chr8_1:5567760-5567779 Msa1174470:intron 35.0%
AATGATCTTTCAGCAACTGA+TGG + chr8_1:5567897-5567916 Msa1174470:intron 35.0%
TGACCTATCTTGTAAACGTT+TGG - chr8_1:5567989-5568008 None:intergenic 35.0%
TTACAAGATAGGTCAGATAC+TGG + chr8_1:5567994-5568013 Msa1174470:CDS 35.0%
ATGAGCAAAATTAACCTCAC+TGG + chr8_1:5568082-5568101 Msa1174470:three_prime_UTR 35.0%
GTTAGAGGTTTATGGCTTCA+GGG - chr8_1:5560005-5560024 None:intergenic 40.0%
AGTTAGAGGTTTATGGCTTC+AGG - chr8_1:5560006-5560025 None:intergenic 40.0%
AAGCCATAAACCTCTAACTG+AGG + chr8_1:5560007-5560026 Msa1174470:five_prime_UTR 40.0%
GTATGAGATGTTGGAATCCA+CGG - chr8_1:5560096-5560115 None:intergenic 40.0%
! TTGTTGTTGTAGATTGCTGG+TGG + chr8_1:5560346-5560365 Msa1174470:intron 40.0%
TTGTAGATTGCTGGTGGTTA+TGG + chr8_1:5560352-5560371 Msa1174470:intron 40.0%
!! GTTATGGTGATGGCAGTATA+AGG + chr8_1:5560368-5560387 Msa1174470:CDS 40.0%
TGATGGCAGTATAAGGCTTT+GGG + chr8_1:5560375-5560394 Msa1174470:CDS 40.0%
! TTTTCAATTTAGGCCCCGTT+TGG + chr8_1:5560896-5560915 Msa1174470:intron 40.0%
ATTCGAACAGTTTCCACATG+AGG + chr8_1:5561016-5561035 Msa1174470:intron 40.0%
AGTTTGTGTTCATTTGTGGC+AGG + chr8_1:5561187-5561206 Msa1174470:intron 40.0%
CAGCACTGTATGCAAATTGT+AGG + chr8_1:5561296-5561315 Msa1174470:CDS 40.0%
CACTGTATGCAAATTGTAGG+CGG + chr8_1:5561299-5561318 Msa1174470:CDS 40.0%
ACTGTATGCAAATTGTAGGC+GGG + chr8_1:5561300-5561319 Msa1174470:CDS 40.0%
TGGTGAGAGGTTTCTTGTTA+CGG + chr8_1:5561358-5561377 Msa1174470:CDS 40.0%
ATCAAGCAAGATTCTGTGGA+TGG + chr8_1:5561413-5561432 Msa1174470:CDS 40.0%
TCAAGCAAGATTCTGTGGAT+GGG + chr8_1:5561414-5561433 Msa1174470:CDS 40.0%
!!! TGGGATGTTTTGACGCATTT+TGG + chr8_1:5561479-5561498 Msa1174470:CDS 40.0%
AAGCAAAGATAGAGTTGCCA+CGG + chr8_1:5561517-5561536 Msa1174470:CDS 40.0%
GGTAGAAATATTCCGTGTGT+TGG + chr8_1:5561592-5561611 Msa1174470:CDS 40.0%
!! TTTGGCTTTACGCTTTGCTT+CGG - chr8_1:5561624-5561643 None:intergenic 40.0%
AAAGCGTAAAGCCAAACGTA+GGG + chr8_1:5561628-5561647 Msa1174470:CDS 40.0%
TTTACGGTTAACCCTACGTT+TGG - chr8_1:5561642-5561661 None:intergenic 40.0%
GAGTTCTACTCCATTGAAAG+TGG + chr8_1:5561908-5561927 Msa1174470:CDS 40.0%
TGACACTTCGAACATCAGAA+CGG - chr8_1:5561973-5561992 None:intergenic 40.0%
! TCGAAGTGTCACACTTAGTT+CGG + chr8_1:5561982-5562001 Msa1174470:CDS 40.0%
AGAATCAATGGTCCTTAAGC+AGG - chr8_1:5562071-5562090 None:intergenic 40.0%
!! TGCTTAAGGACCATTGATTC+TGG + chr8_1:5562070-5562089 Msa1174470:CDS 40.0%
!! AGGACCATTGATTCTGGATA+TGG + chr8_1:5562076-5562095 Msa1174470:CDS 40.0%
GAGTCCATATCCAGAATCAA+TGG - chr8_1:5562083-5562102 None:intergenic 40.0%
ATTCTCCCCACTAACAAGTA+TGG + chr8_1:5562112-5562131 Msa1174470:CDS 40.0%
! CAAGTCCATACTTGTTAGTG+GGG - chr8_1:5562120-5562139 None:intergenic 40.0%
AGCTTCAATTGCTTCAACAC+GGG - chr8_1:5562191-5562210 None:intergenic 40.0%
GAGCTTCAATTGCTTCAACA+CGG - chr8_1:5562192-5562211 None:intergenic 40.0%
GTTGAAGCAATTGAAGCTCA+TGG + chr8_1:5562193-5562212 Msa1174470:CDS 40.0%
AAAGCCATGTTTATCTGGCA+AGG - chr8_1:5562242-5562261 None:intergenic 40.0%
GTGACAAAGCCATGTTTATC+TGG - chr8_1:5562247-5562266 None:intergenic 40.0%
!! GATAAACATGGCTTTGTCAC+AGG + chr8_1:5562247-5562266 Msa1174470:CDS 40.0%
GACCAGGTTTCTGCTTAATT+TGG - chr8_1:5562306-5562325 None:intergenic 40.0%
ACTCTTCAGTCTTCACGATT+TGG + chr8_1:5562592-5562611 Msa1174470:intron 40.0%
CTCTTCAGTCTTCACGATTT+GGG + chr8_1:5562593-5562612 Msa1174470:intron 40.0%
AGTAGGAGAGAGTTGCATTA+GGG - chr8_1:5562642-5562661 None:intergenic 40.0%
TAGTAGGAGAGAGTTGCATT+AGG - chr8_1:5562643-5562662 None:intergenic 40.0%
ACAGCGATATATTTGGCATC+GGG - chr8_1:5562847-5562866 None:intergenic 40.0%
CAGAGCAACAGCGATATATT+TGG - chr8_1:5562854-5562873 None:intergenic 40.0%
ATATATCGCTGTTGCTCTGT+TGG + chr8_1:5562855-5562874 Msa1174470:CDS 40.0%
GCTAGAAGCTAAACCAAACT+AGG - chr8_1:5563196-5563215 None:intergenic 40.0%
CTGAAAAAAGTTAGAAGCGG+AGG + chr8_1:5563298-5563317 Msa1174470:intron 40.0%
!! TGGGCACCATACTTTGAAAT+TGG - chr8_1:5563470-5563489 None:intergenic 40.0%
CCTGTCTTTATGCGCAAAAA+TGG - chr8_1:5563763-5563782 None:intergenic 40.0%
!! CCATTTTTGCGCATAAAGAC+AGG + chr8_1:5563760-5563779 Msa1174470:CDS 40.0%
! TGTTTAGTGTCGGAAAGGAT+CGG + chr8_1:5563931-5563950 Msa1174470:CDS 40.0%
AGGATCGGGTAGTAAAGTAT+TGG + chr8_1:5563946-5563965 Msa1174470:CDS 40.0%
! GGATCGGGTAGTAAAGTATT+GGG + chr8_1:5563947-5563966 Msa1174470:CDS 40.0%
! CGTGGTGATTTTATTGTCAC+CGG + chr8_1:5564044-5564063 Msa1174470:CDS 40.0%
ACTTCTTCAATGCAGGACAT+AGG + chr8_1:5564155-5564174 Msa1174470:intron 40.0%
CTTCTTCAATGCAGGACATA+GGG + chr8_1:5564156-5564175 Msa1174470:intron 40.0%
TGCAGGAAGAAAAGGAGAAA+AGG + chr8_1:5564345-5564364 Msa1174470:intron 40.0%
ACTGAAGGAAGAAATACCAG+AGG + chr8_1:5564421-5564440 Msa1174470:CDS 40.0%
AAGGAAGAAATACCAGAGGA+GGG + chr8_1:5564425-5564444 Msa1174470:CDS 40.0%
AAAGCGCATTAGTGAACATC+AGG + chr8_1:5564538-5564557 Msa1174470:CDS 40.0%
ACAGGCTTCAAATTGCTTGA+TGG - chr8_1:5564784-5564803 None:intergenic 40.0%
! CAATGGGGTTCAATGTTTTG+GGG - chr8_1:5564935-5564954 None:intergenic 40.0%
! CTCAATGGGGTTCAATGTTT+TGG - chr8_1:5564937-5564956 None:intergenic 40.0%
GAACATAATCAGAAGGTGAC+CGG - chr8_1:5565188-5565207 None:intergenic 40.0%
TGTAAAGATTATTGCGCTCC+AGG - chr8_1:5565508-5565527 None:intergenic 40.0%
CAATACTCGGATGTCAATAG+CGG + chr8_1:5566005-5566024 Msa1174470:intron 40.0%
ATGTCAATAGCGGCAGATAT+AGG + chr8_1:5566015-5566034 Msa1174470:intron 40.0%
ATAGCACATTCCCATCAATC+CGG - chr8_1:5566186-5566205 None:intergenic 40.0%
!!! TTCCTAACCCGTTTTGGAAT+CGG + chr8_1:5566205-5566224 Msa1174470:intron 40.0%
ACAAGCTAGGTTGTCAATCA+TGG - chr8_1:5566248-5566267 None:intergenic 40.0%
GAAAAGACACCCTAGTAACA+GGG - chr8_1:5566332-5566351 None:intergenic 40.0%
AGAAAAGACACCCTAGTAAC+AGG - chr8_1:5566333-5566352 None:intergenic 40.0%
AGTGCAATGGTTAGAGGTTT+AGG + chr8_1:5566437-5566456 Msa1174470:intron 40.0%
GAAATGCTTCTGCTTTCTAG+TGG - chr8_1:5566558-5566577 None:intergenic 40.0%
GTTCTATTAACTGAACCAGC+CGG - chr8_1:5567066-5567085 None:intergenic 40.0%
GAATCACCCATTAAAAGAGG+TGG + chr8_1:5567131-5567150 Msa1174470:intron 40.0%
! TGAAAGGCCCCAATTTTGTA+GGG - chr8_1:5567206-5567225 None:intergenic 40.0%
! ATGAAAGGCCCCAATTTTGT+AGG - chr8_1:5567207-5567226 None:intergenic 40.0%
GACTGAAAGGAATCAAGTCA+TGG + chr8_1:5567436-5567455 Msa1174470:intron 40.0%
CAACCTCTTGTGTAGAAAAC+AGG + chr8_1:5567462-5567481 Msa1174470:intron 40.0%
! CTACCTGTTTTCTACACAAG+AGG - chr8_1:5567468-5567487 None:intergenic 40.0%
! AAAACAGGTAGAGAGAGTGT+TGG + chr8_1:5567477-5567496 Msa1174470:intron 40.0%
!! AAACAGGTAGAGAGAGTGTT+GGG + chr8_1:5567478-5567497 Msa1174470:intron 40.0%
GAGGTTTGTCAGATCAAAAG+AGG + chr8_1:5567553-5567572 Msa1174470:intron 40.0%
! AAGCTTTATCCCACTAAGTG+GGG - chr8_1:5567698-5567717 None:intergenic 40.0%
! CAAGCTTTATCCCACTAAGT+GGG - chr8_1:5567699-5567718 None:intergenic 40.0%
TTTGAACCTTGTATCAGGGT+TGG + chr8_1:5567764-5567783 Msa1174470:intron 40.0%
ATCTTTCCAACCCTGATACA+AGG - chr8_1:5567773-5567792 None:intergenic 40.0%
CAGGGTTGGAAAGATATCTT+TGG + chr8_1:5567778-5567797 Msa1174470:intron 40.0%
ACAAACCTGGATATGATCCA+TGG - chr8_1:5567818-5567837 None:intergenic 40.0%
! CAAGATCAGATGCTCTTTTC+CGG + chr8_1:5567923-5567942 Msa1174470:CDS 40.0%
! AAGATCAGATGCTCTTTTCC+GGG + chr8_1:5567924-5567943 Msa1174470:CDS 40.0%
! CAGATACTGGAGAGTTTTTG+CGG + chr8_1:5568007-5568026 Msa1174470:CDS 40.0%
! TAGAGCTTTGATCCCCAAAA+AGG + chr8_1:5568182-5568201 Msa1174470:three_prime_UTR 40.0%
! TTTACGAGGATGCCTTTTTG+GGG - chr8_1:5568197-5568216 None:intergenic 40.0%
! CTTTACGAGGATGCCTTTTT+GGG - chr8_1:5568198-5568217 None:intergenic 40.0%
! ACTTTACGAGGATGCCTTTT+TGG - chr8_1:5568199-5568218 None:intergenic 40.0%
! TCCAATACGGTTTTCTTGTC+AGG + chr8_1:5568346-5568365 Msa1174470:three_prime_UTR 40.0%
! CCAATACGGTTTTCTTGTCA+GGG + chr8_1:5568347-5568366 Msa1174470:three_prime_UTR 40.0%
CTGCCTCAGTTAGAGGTTTA+TGG - chr8_1:5560013-5560032 None:intergenic 45.0%
ATTGTTGCTGCCTCAGTTAG+AGG - chr8_1:5560020-5560039 None:intergenic 45.0%
TCTAACTGAGGCAGCAACAA+TGG + chr8_1:5560019-5560038 Msa1174470:exon 45.0%
AACATCTCATACGACAGCTC+CGG + chr8_1:5560104-5560123 Msa1174470:CDS 45.0%
TCTCCAGCTCTCGAGAAAAT+CGG + chr8_1:5560140-5560159 Msa1174470:CDS 45.0%
ATTGCTGGTGGTTATGGTGA+TGG + chr8_1:5560358-5560377 Msa1174470:CDS 45.0%
GTGATGGCAGTATAAGGCTT+TGG + chr8_1:5560374-5560393 Msa1174470:CDS 45.0%
!! AAGGCTTTGGGACACTGATA+AGG + chr8_1:5560387-5560406 Msa1174470:CDS 45.0%
!! AGGCTTTGGGACACTGATAA+GGG + chr8_1:5560388-5560407 Msa1174470:CDS 45.0%
! CTTGGTTCGTTACTTGCTTC+TGG + chr8_1:5560472-5560491 Msa1174470:CDS 45.0%
!! TGTTTCTAGCTTGCTTCCAC+AGG - chr8_1:5560766-5560785 None:intergenic 45.0%
TCTGCGTTTGCTTATGTCAG+TGG + chr8_1:5560832-5560851 Msa1174470:intron 45.0%
TCACAAGTGCTTATGCCAGT+AGG + chr8_1:5561111-5561130 Msa1174470:intron 45.0%
GCGGGCATCATAGTGAAATT+TGG + chr8_1:5561318-5561337 Msa1174470:CDS 45.0%
TGGACATTGGATGTTGATCC+TGG + chr8_1:5561338-5561357 Msa1174470:CDS 45.0%
GTAACAAGAAACCTCTCACC+AGG - chr8_1:5561359-5561378 None:intergenic 45.0%
GGTGAGAGGTTTCTTGTTAC+GGG + chr8_1:5561359-5561378 Msa1174470:CDS 45.0%
CAAGCAAGATTCTGTGGATG+GGG + chr8_1:5561415-5561434 Msa1174470:CDS 45.0%
!! CGCATTTTGGTGAGATTCAG+CGG + chr8_1:5561492-5561511 Msa1174470:CDS 45.0%
!! GATTCCCAGACTTGTTGAAC+TGG - chr8_1:5561544-5561563 None:intergenic 45.0%
CATCTTTCCTGCAACATGAC+AGG - chr8_1:5561573-5561592 None:intergenic 45.0%
CTGTCATGTTGCAGGAAAGA+TGG + chr8_1:5561571-5561590 Msa1174470:CDS 45.0%
CAAAGCGTAAAGCCAAACGT+AGG + chr8_1:5561627-5561646 Msa1174470:CDS 45.0%
! AGAGAAGAAGCATGGCAAAG+AGG + chr8_1:5561664-5561683 Msa1174470:CDS 45.0%
GCTACAGAGGGAACTGAAAA+TGG + chr8_1:5561686-5561705 Msa1174470:CDS 45.0%
GGGAACTGAAAATGGAGATG+CGG + chr8_1:5561694-5561713 Msa1174470:CDS 45.0%
AATGGAGATGCGGAGAACAA+AGG + chr8_1:5561704-5561723 Msa1174470:CDS 45.0%
AGTGAATTCTTCGGAGTGGT+TGG - chr8_1:5561851-5561870 None:intergenic 45.0%
TGCTAGTGAATTCTTCGGAG+TGG - chr8_1:5561855-5561874 None:intergenic 45.0%
!! TGGACTTGTTGGAACCAAAG+AGG + chr8_1:5562132-5562151 Msa1174470:CDS 45.0%
!! GGACTTGTTGGAACCAAAGA+GGG + chr8_1:5562133-5562152 Msa1174470:CDS 45.0%
GAAGCAATTGAAGCTCATGG+AGG + chr8_1:5562196-5562215 Msa1174470:CDS 45.0%
GGAATATTACGCACTTGACC+AGG - chr8_1:5562322-5562341 None:intergenic 45.0%
! AGTCTTCACGATTTGGGTGT+GGG + chr8_1:5562599-5562618 Msa1174470:intron 45.0%
TAGGAGAGAGTTGCATTAGG+GGG - chr8_1:5562640-5562659 None:intergenic 45.0%
GTAGGAGAGAGTTGCATTAG+GGG - chr8_1:5562641-5562660 None:intergenic 45.0%
CTTCCCAGATTGCCAACATA+TGG - chr8_1:5563023-5563042 None:intergenic 45.0%
TATGTTGGCAATCTGGGAAG+TGG + chr8_1:5563023-5563042 Msa1174470:intron 45.0%
ATGTTGGCAATCTGGGAAGT+GGG + chr8_1:5563024-5563043 Msa1174470:intron 45.0%
!! CAGGAAGCACTTACAGAGAA+CGG - chr8_1:5563389-5563408 None:intergenic 45.0%
GCTTGTGGCCATACAATGAA+AGG - chr8_1:5563632-5563651 None:intergenic 45.0%
! GTTTAGTGTCGGAAAGGATC+GGG + chr8_1:5563932-5563951 Msa1174470:CDS 45.0%
GAGCAGCTGTTAACTCTTGA+AGG + chr8_1:5563984-5564003 Msa1174470:CDS 45.0%
TGTCTTGCAGTCAGTAATCG+TGG + chr8_1:5564026-5564045 Msa1174470:CDS 45.0%
AATTGAGCGGTCATGAGATC+CGG - chr8_1:5564066-5564085 None:intergenic 45.0%
GAGTGACACTTCTTCAATGC+AGG + chr8_1:5564148-5564167 Msa1174470:intron 45.0%
AGGGCCATTGTCTCTTACAA+TGG + chr8_1:5564175-5564194 Msa1174470:intron 45.0%
GAAGGAAGAAATACCAGAGG+AGG + chr8_1:5564424-5564443 Msa1174470:CDS 45.0%
!!! CTCGGTTTTTTTCCCAGCTA+CGG - chr8_1:5564459-5564478 None:intergenic 45.0%
GGTTATACTCGCTCTCTTAC+AGG + chr8_1:5564559-5564578 Msa1174470:intron 45.0%
! TGTTTGGGGTTCAGAGCATA+TGG - chr8_1:5564754-5564773 None:intergenic 45.0%
! CATTCATAAGCGGATTTGCC+TGG - chr8_1:5565164-5565183 None:intergenic 45.0%
CAGGCAAATCCGCTTATGAA+TGG + chr8_1:5565162-5565181 Msa1174470:CDS 45.0%
CAAATCCGCTTATGAATGGC+CGG + chr8_1:5565166-5565185 Msa1174470:CDS 45.0%
CACTATACTGCGATGCACTT+GGG - chr8_1:5566157-5566176 None:intergenic 45.0%
!! GTGCTATTCCTAACCCGTTT+TGG + chr8_1:5566199-5566218 Msa1174470:intron 45.0%
AAATCCACCCTCAATGGATC+AGG + chr8_1:5566294-5566313 Msa1174470:intron 45.0%
AAAAGGGCCTGATCCATTGA+GGG - chr8_1:5566304-5566323 None:intergenic 45.0%
!! AAGAAGAGCATCAATGCACC+TGG + chr8_1:5566410-5566429 Msa1174470:intron 45.0%
CTAACCATTGCACTAAGACC+AGG - chr8_1:5566431-5566450 None:intergenic 45.0%
GGTCTTAGTGCAATGGTTAG+AGG + chr8_1:5566431-5566450 Msa1174470:intron 45.0%
GCAATGGTTAGAGGTTTAGG+AGG + chr8_1:5566440-5566459 Msa1174470:intron 45.0%
TCACTGAAGTCGGTTAAGAC+AGG - chr8_1:5566953-5566972 None:intergenic 45.0%
AACGAGGTCAAGGTCATCTT+TGG + chr8_1:5567006-5567025 Msa1174470:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr8_1:5567423-5567442 Msa1174470:intron 45.0%
!! AACAGGTAGAGAGAGTGTTG+GGG + chr8_1:5567479-5567498 Msa1174470:intron 45.0%
!! ACTAAGTGGGGTTGGTTACA+TGG - chr8_1:5567686-5567705 None:intergenic 45.0%
ATGTAACCAACCCCACTTAG+TGG + chr8_1:5567685-5567704 Msa1174470:intron 45.0%
TGTAACCAACCCCACTTAGT+GGG + chr8_1:5567686-5567705 Msa1174470:intron 45.0%
TTTATCCCACTAAGTGGGGT+TGG - chr8_1:5567694-5567713 None:intergenic 45.0%
! CCAAGCTTTATCCCACTAAG+TGG - chr8_1:5567700-5567719 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG + chr8_1:5567697-5567716 Msa1174470:intron 45.0%
!!! TGGTTTTAACCTTGCAGCCA+TGG + chr8_1:5567798-5567817 Msa1174470:CDS 45.0%
!! GCAGTTTTGATCTTGCATCC+CGG - chr8_1:5567945-5567964 None:intergenic 45.0%
GGATGCAAGATCAAAACTGC+TGG + chr8_1:5567945-5567964 Msa1174470:CDS 45.0%
CCCTGACAAGAAAACCGTAT+TGG - chr8_1:5568350-5568369 None:intergenic 45.0%
!!! ATATTTGTTTTTTTTTTATA+AGG + chr8_1:5562354-5562373 Msa1174470:intron 5.0%
!! ATTAAAAAAAATAATTATCA+GGG - chr8_1:5563801-5563820 None:intergenic 5.0%
!!! TATTAGTTATTATTTTTAAT+TGG + chr8_1:5565766-5565785 Msa1174470:intron 5.0%
!! TAATAAATTTAAAAAAGAAA+AGG - chr8_1:5566606-5566625 None:intergenic 5.0%
AGGTTTATGGCTTCAGGGCA+GGG - chr8_1:5560000-5560019 None:intergenic 50.0%
TGAGATGTTGGAATCCACGG+AGG - chr8_1:5560093-5560112 None:intergenic 50.0%
GGAGCTGTCGTATGAGATGT+TGG - chr8_1:5560105-5560124 None:intergenic 50.0%
!! TGGAGAGAGAAGGTGTTTGC+CGG - chr8_1:5560126-5560145 None:intergenic 50.0%
CTCTCGAGAAAATCGGCGTA+TGG + chr8_1:5560147-5560166 Msa1174470:CDS 50.0%
ACACGGAACGGAAGGAGTTA+GGG - chr8_1:5560201-5560220 None:intergenic 50.0%
GGAAGATGCGATTGACGTGA+CGG - chr8_1:5560240-5560259 None:intergenic 50.0%
CGCATCTTCCCCTTCTCAAT+TGG + chr8_1:5560250-5560269 Msa1174470:CDS 50.0%
! TGGGATGTTGTTGGTGAGAC+CGG + chr8_1:5560520-5560539 Msa1174470:CDS 50.0%
TGGATGTTGATCCTGGTGAG+AGG + chr8_1:5561345-5561364 Msa1174470:CDS 50.0%
TGTTACGGGTTCTGCAGACA+AGG + chr8_1:5561373-5561392 Msa1174470:CDS 50.0%
TGTGGATGGGGAGTCTGTAA+AGG + chr8_1:5561427-5561446 Msa1174470:CDS 50.0%
GATGGGGAGTCTGTAAAGGA+TGG + chr8_1:5561431-5561450 Msa1174470:CDS 50.0%
!! AGACTTGTTGAACTGGACCG+TGG - chr8_1:5561537-5561556 None:intergenic 50.0%
ACGGTCCAGTTCAACAAGTC+TGG + chr8_1:5561536-5561555 Msa1174470:CDS 50.0%
CGGTCCAGTTCAACAAGTCT+GGG + chr8_1:5561537-5561556 Msa1174470:CDS 50.0%
CATGGCAAAGAGGCTACAGA+GGG + chr8_1:5561674-5561693 Msa1174470:CDS 50.0%
CTTAAGCAGGAACCAGTGCT+TGG - chr8_1:5562058-5562077 None:intergenic 50.0%
!! CAAGCACTGGTTCCTGCTTA+AGG + chr8_1:5562056-5562075 Msa1174470:CDS 50.0%
GCTGCCTTGCCAGATAAACA+TGG + chr8_1:5562235-5562254 Msa1174470:CDS 50.0%
! CAGTCTTCACGATTTGGGTG+TGG + chr8_1:5562598-5562617 Msa1174470:intron 50.0%
! GTCTTCACGATTTGGGTGTG+GGG + chr8_1:5562600-5562619 Msa1174470:intron 50.0%
AGAGAGTTGCATTAGGGGGA+TGG - chr8_1:5562636-5562655 None:intergenic 50.0%
TACACAGAACAGGCAGCTTG+TGG - chr8_1:5563647-5563666 None:intergenic 50.0%
CAAGCTGCCTGTTCTGTGTA+TGG + chr8_1:5563647-5563666 Msa1174470:CDS 50.0%
CGTAGCTGGGAAAAAAACCG+AGG + chr8_1:5564457-5564476 Msa1174470:CDS 50.0%
TGTAGCGGTAAGGGTTTCCT+CGG - chr8_1:5564477-5564496 None:intergenic 50.0%
TGGGGTTCAGAGCATATGGT+TGG - chr8_1:5564750-5564769 None:intergenic 50.0%
CCACTATACTGCGATGCACT+TGG - chr8_1:5566158-5566177 None:intergenic 50.0%
CCAAGTGCATCGCAGTATAG+TGG + chr8_1:5566155-5566174 Msa1174470:intron 50.0%
TGCATCGCAGTATAGTGGTG+CGG + chr8_1:5566160-5566179 Msa1174470:intron 50.0%
! AGCCGATTCCAAAACGGGTT+AGG - chr8_1:5566210-5566229 None:intergenic 50.0%
! GTAGCAGCCGATTCCAAAAC+GGG - chr8_1:5566215-5566234 None:intergenic 50.0%
! GGTAGCAGCCGATTCCAAAA+CGG - chr8_1:5566216-5566235 None:intergenic 50.0%
GAAAAGGGCCTGATCCATTG+AGG - chr8_1:5566305-5566324 None:intergenic 50.0%
!! TGCACCTGGTCTTAGTGCAA+TGG + chr8_1:5566424-5566443 Msa1174470:intron 50.0%
AGTGGGTGGAACACTTCTTC+AGG - chr8_1:5566540-5566559 None:intergenic 50.0%
! TGCTTCTGCTTTCTAGTGGG+TGG - chr8_1:5566554-5566573 None:intergenic 50.0%
! GTTGAGCTTGTTTGCCGCAT+AGG + chr8_1:5566872-5566891 Msa1174470:CDS 50.0%
GAAGTCGGTTAAGACAGGTC+TGG - chr8_1:5566948-5566967 None:intergenic 50.0%
GATAACTTGATTGGACCGGC+TGG + chr8_1:5567048-5567067 Msa1174470:intron 50.0%
ATTTAACCAAGGGGGAGCCT+TGG + chr8_1:5567388-5567407 Msa1174470:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr8_1:5567408-5567427 None:intergenic 50.0%
GGATATGATCCATGGCTGCA+AGG - chr8_1:5567810-5567829 None:intergenic 50.0%
TGCAGCCATGGATCATATCC+AGG + chr8_1:5567810-5567829 Msa1174470:CDS 50.0%
TGATGCTGGTGGCTCAGAAA+AGG + chr8_1:5568269-5568288 Msa1174470:three_prime_UTR 50.0%
TGGTGGCTCAGAAAAGGTCA+GGG + chr8_1:5568275-5568294 Msa1174470:three_prime_UTR 50.0%
TGTCAGGGCTAATACCCTGT+TGG + chr8_1:5568362-5568381 Msa1174470:three_prime_UTR 50.0%
GAGGTTTATGGCTTCAGGGC+AGG - chr8_1:5560001-5560020 None:intergenic 55.0%
TTACCTCCGATACGAGCCGT+CGG + chr8_1:5560049-5560068 Msa1174470:CDS 55.0%
TCTCGAGAGCTGGAGAGAGA+AGG - chr8_1:5560136-5560155 None:intergenic 55.0%
!!! ACGCCGATTTTCTCGAGAGC+TGG - chr8_1:5560146-5560165 None:intergenic 55.0%
GACACGGAACGGAAGGAGTT+AGG - chr8_1:5560202-5560221 None:intergenic 55.0%
AGAAGGACCACGACACGGAA+CGG - chr8_1:5560213-5560232 None:intergenic 55.0%
ATTGACGTGACGGCGAGAGA+AGG - chr8_1:5560230-5560249 None:intergenic 55.0%
ACCGGTCTCTTTCGTCTTCG+CGG + chr8_1:5560538-5560557 Msa1174470:CDS 55.0%
ACCGCGAAGACGAAAGAGAC+CGG - chr8_1:5560542-5560561 None:intergenic 55.0%
CATTAGCTGTCCTGAGCCTG+TGG + chr8_1:5560747-5560766 Msa1174470:intron 55.0%
!! TAGCTTGCTTCCACAGGCTC+AGG - chr8_1:5560760-5560779 None:intergenic 55.0%
GGGGAGTCTGTAAAGGATGG+TGG + chr8_1:5561434-5561453 Msa1174470:CDS 55.0%
! CTGCTAGCCTGTCATGTTGC+AGG + chr8_1:5561563-5561582 Msa1174470:CDS 55.0%
CTTCGGCGTCATCCAACACA+CGG - chr8_1:5561607-5561626 None:intergenic 55.0%
GCATGGCAAAGAGGCTACAG+AGG + chr8_1:5561673-5561692 Msa1174470:CDS 55.0%
AAGCTCATGGAGGCTCTGTG+CGG + chr8_1:5562206-5562225 Msa1174470:CDS 55.0%
GCTCTTCAGTACGATCCCAG+CGG - chr8_1:5564091-5564110 None:intergenic 55.0%
AATACCAGAGGAGGGAGCAG+TGG + chr8_1:5564433-5564452 Msa1174470:CDS 55.0%
GGTGACCGGCCATTCATAAG+CGG - chr8_1:5565174-5565193 None:intergenic 55.0%
GGGCTGTTCTTCCGTGAAAG+CGG - chr8_1:5566107-5566126 None:intergenic 55.0%
ACGGAAGAACAGCCCAGAGT+GGG + chr8_1:5566112-5566131 Msa1174470:intron 55.0%
TGGAAGCTACCACCCACTCT+GGG - chr8_1:5566127-5566146 None:intergenic 55.0%
CGATGCACTTGGGAGCTTTG+TGG - chr8_1:5566147-5566166 None:intergenic 55.0%
GCAACAGCAGTGTGCCTATG+CGG - chr8_1:5566889-5566908 None:intergenic 55.0%
GTTAAGACAGGTCTGGCAGC+TGG - chr8_1:5566941-5566960 None:intergenic 55.0%
CTGGTGGCTCAGAAAAGGTC+AGG + chr8_1:5568274-5568293 Msa1174470:three_prime_UTR 55.0%
ACTCCTTCCGTTCCGTGTCG+TGG + chr8_1:5560203-5560222 Msa1174470:CDS 60.0%
GCGAGAGAAGGACCACGACA+CGG - chr8_1:5560218-5560237 None:intergenic 60.0%
TCTTCGCGGTCATCGCGATC+AGG + chr8_1:5560552-5560571 Msa1174470:CDS 60.0%
ATGACCGCTCAATTCGCCGC+TGG + chr8_1:5564072-5564091 Msa1174470:CDS 60.0%
TGACCGCTCAATTCGCCGCT+GGG + chr8_1:5564073-5564092 Msa1174470:CDS 60.0%
GATCCCAGCGGCGAATTGAG+CGG - chr8_1:5564079-5564098 None:intergenic 60.0%
! GGCAGATTGCGCCGCTTTCA+CGG + chr8_1:5566093-5566112 Msa1174470:intron 60.0%
CACGGAAGAACAGCCCAGAG+TGG + chr8_1:5566111-5566130 Msa1174470:intron 60.0%
GAAGAACAGCCCAGAGTGGG+TGG + chr8_1:5566115-5566134 Msa1174470:intron 60.0%
GTGGAAGCTACCACCCACTC+TGG - chr8_1:5566128-5566147 None:intergenic 60.0%
TCGCAGTATAGTGGTGCGGC+CGG + chr8_1:5566164-5566183 Msa1174470:intron 60.0%
TAGTGGTGCGGCCGGATTGA+TGG + chr8_1:5566172-5566191 Msa1174470:intron 60.0%
AGTGGTGCGGCCGGATTGAT+GGG + chr8_1:5566173-5566192 Msa1174470:intron 60.0%
AGGGCCTGATCCATTGAGGG+TGG - chr8_1:5566301-5566320 None:intergenic 60.0%
ACGAGGCCGACGGCTCGTAT+CGG - chr8_1:5560058-5560077 None:intergenic 65.0%
TACGAGCCGTCGGCCTCGTT+CGG + chr8_1:5560059-5560078 Msa1174470:CDS 65.0%
ATGACGCCGAACGAGGCCGA+CGG - chr8_1:5560068-5560087 None:intergenic 65.0%
GGCGTATGGCACGTGCGACA+GGG + chr8_1:5560161-5560180 Msa1174470:CDS 65.0%
GGACCACGACACGGAACGGA+AGG - chr8_1:5560209-5560228 None:intergenic 65.0%
AGGGAGCAGTGGCCGTAGCT+GGG + chr8_1:5564444-5564463 Msa1174470:CDS 65.0%
GACAGGTCTGGCAGCTGGTG+TGG - chr8_1:5566936-5566955 None:intergenic 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG + chr8_1:5567396-5567415 Msa1174470:intron 65.0%
AGGCCGACGGCTCGTATCGG+AGG - chr8_1:5560055-5560074 None:intergenic 70.0%
GGAGGCGATGACGCCGAACG+AGG - chr8_1:5560075-5560094 None:intergenic 70.0%
GTTCGGCGTCATCGCCTCCG+TGG + chr8_1:5560076-5560095 Msa1174470:CDS 70.0%
CGGCGTATGGCACGTGCGAC+AGG + chr8_1:5560160-5560179 Msa1174470:CDS 70.0%
ACGGCCACTGCTCCCTCCTC+TGG - chr8_1:5564440-5564459 None:intergenic 70.0%
GAGGGAGCAGTGGCCGTAGC+TGG + chr8_1:5564443-5564462 Msa1174470:CDS 70.0%
GTTGCGCCAAGGCTCCCCCT+TGG - chr8_1:5567397-5567416 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 5559958 5568402 5559958 ID=Msa1174470;Name=Msa1174470
chr8_1 mRNA 5559958 5568402 5559958 ID=Msa1174470-mRNA-1;Parent=Msa1174470;Name=Msa1174470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=80|1|1|1|1|1|12|349|943
chr8_1 exon 5559958 5560271 5559958 ID=Msa1174470-mRNA-1:exon:1832;Parent=Msa1174470-mRNA-1
chr8_1 exon 5560358 5560573 5560358 ID=Msa1174470-mRNA-1:exon:1833;Parent=Msa1174470-mRNA-1
chr8_1 exon 5561209 5562327 5561209 ID=Msa1174470-mRNA-1:exon:1834;Parent=Msa1174470-mRNA-1
chr8_1 exon 5562769 5562891 5562769 ID=Msa1174470-mRNA-1:exon:1835;Parent=Msa1174470-mRNA-1
chr8_1 exon 5563600 5563781 5563600 ID=Msa1174470-mRNA-1:exon:1836;Parent=Msa1174470-mRNA-1
chr8_1 exon 5563893 5564124 5563893 ID=Msa1174470-mRNA-1:exon:1837;Parent=Msa1174470-mRNA-1
chr8_1 exon 5564350 5564559 5564350 ID=Msa1174470-mRNA-1:exon:1838;Parent=Msa1174470-mRNA-1
chr8_1 exon 5565129 5565257 5565129 ID=Msa1174470-mRNA-1:exon:1839;Parent=Msa1174470-mRNA-1
chr8_1 exon 5566660 5566728 5566660 ID=Msa1174470-mRNA-1:exon:1840;Parent=Msa1174470-mRNA-1
chr8_1 exon 5566872 5566994 5566872 ID=Msa1174470-mRNA-1:exon:1841;Parent=Msa1174470-mRNA-1
chr8_1 exon 5567781 5567831 5567781 ID=Msa1174470-mRNA-1:exon:1842;Parent=Msa1174470-mRNA-1
chr8_1 exon 5567910 5568402 5567910 ID=Msa1174470-mRNA-1:exon:1843;Parent=Msa1174470-mRNA-1
chr8_1 five_prime_UTR 5559958 5560037 5559958 ID=Msa1174470-mRNA-1:five_prime_utr;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5560038 5560271 5560038 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5560358 5560573 5560358 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5561209 5562327 5561209 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5562769 5562891 5562769 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5563600 5563781 5563600 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5563893 5564124 5563893 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5564350 5564559 5564350 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5565129 5565257 5565129 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5566660 5566728 5566660 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5566872 5566994 5566872 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5567781 5567831 5567781 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 CDS 5567910 5568053 5567910 ID=Msa1174470-mRNA-1:cds;Parent=Msa1174470-mRNA-1
chr8_1 three_prime_UTR 5568054 5568402 5568054 ID=Msa1174470-mRNA-1:three_prime_utr;Parent=Msa1174470-mRNA-1
Gene Sequence

>Msa1174470

ATGGTGAAAGCTTACCTCCGATACGAGCCGTCGGCCTCGTTCGGCGTCATCGCCTCCGTGGATTCCAACATCTCATACGACAGCTCCGGCAAACACCTTCTCTCTCCAGCTCTCGAGAAAATCGGCGTATGGCACGTGCGACAGGGCATCTGCATCAAAACCCTAACTCCTTCCGTTCCGTGTCGTGGTCCTTCTCTCGCCGTCACGTCAATCGCATCTTCCCCTTCTCAATTGATTGCTGGTGGTTATGGTGATGGCAGTATAAGGCTTTGGGACACTGATAAGGGAACTTGTGAAACTACTTTGAATGGACATAAAGGAGCTGTAACTGCTCTTCGTTATAATAAGCTTGGTTCGTTACTTGCTTCTGGTAGCAAAGATAACGATGTTATTTTGTGGGATGTTGTTGGTGAGACCGGTCTCTTTCGTCTTCGCGGTCATCGCGATCAGGTGACTGATGTTGTTTTTGTTGGTTCTGGGAAAAAACTAGTTACTTCATCCAAAGATAAATTTTTGAGAGTATGGGATATTGATACTCAGCACTGTATGCAAATTGTAGGCGGGCATCATAGTGAAATTTGGACATTGGATGTTGATCCTGGTGAGAGGTTTCTTGTTACGGGTTCTGCAGACAAGGAGCTCCGTTTTTATTCAATCAAGCAAGATTCTGTGGATGGGGAGTCTGTAAAGGATGGTGGAGATTCTTCCGTTTCAAACAAATGGGATGTTTTGACGCATTTTGGTGAGATTCAGCGGCAAAGCAAAGATAGAGTTGCCACGGTCCAGTTCAACAAGTCTGGGAATCTGCTAGCCTGTCATGTTGCAGGAAAGATGGTAGAAATATTCCGTGTGTTGGATGACGCCGAAGCAAAGCGTAAAGCCAAACGTAGGGTTAACCGTAAAAAAGAGAAGAAGCATGGCAAAGAGGCTACAGAGGGAACTGAAAATGGAGATGCGGAGAACAAAGGAGATAATTCTATTGTGACTGATGGACCCATAGAAACAAATAAAACAGTTACCGTACCTGATGTTTTTAAACTGTTGCATACTATTAGAGCTAGCAAAAAGATATGCTCCATTTCTTTTTGTCCAACCACTCCGAAGAATTCACTAGCAACTCTAGCATTGTCCTTAAACAATAATCTAATCGAGTTCTACTCCATTGAAAGTGGTGAAACCAAAAAAACACTTGGTATTGATCTTGAAGGACACCGTTCTGATGTTCGAAGTGTCACACTTAGTTCGGACAACACTTTTCTGTTGTCAACCAGTCACAATGCAGTAAAAATATGGAATCCAAGCACTGGTTCCTGCTTAAGGACCATTGATTCTGGATATGGACTCTGCAGTTTAATTCTCCCCACTAACAAGTATGGACTTGTTGGAACCAAAGAGGGAACCTTAGAAATTATTGACATCGGAAGCAGTACCCGTGTTGAAGCAATTGAAGCTCATGGAGGCTCTGTGCGGACAATTGCTGCCTTGCCAGATAAACATGGCTTTGTCACAGGAAGTCAAGATCATGATGTAAAGTTTTGGGAGTACCAAATTAAGCAGAAACCTGGTCAAGCTACTAAGCAACTCACCGTGTCAAATGTCAAGACTATGAGAATGAATGATGATGTTCTTGTGGTTGCAATTAGTCCCGATGCCAAATATATCGCTGTTGCTCTGTTGGATAGTACTGTTAAGATTCACTTTGTAGACACGTTCAAATTCTTCCTTTCATTGTATGGCCACAAGCTGCCTGTTCTGTGTATGGATATATCATCAGATGGAGATTTAATTGTGACTGGCTCTGCTGATAAAAATATAAAGATTTGGGGTTTGGATTTTGGTGACTGTCATAAATCCATTTTTGCGCATAAAGACAGTGTTATGGCAGTACAATTTGTTCCCAAGACACATTATGTGTTTAGTGTCGGAAAGGATCGGGTAGTAAAGTATTGGGATGCTGATAAATTTGAGCAGCTGTTAACTCTTGAAGGACATCATGCAGATATTTGGTGTCTTGCAGTCAGTAATCGTGGTGATTTTATTGTCACCGGATCTCATGACCGCTCAATTCGCCGCTGGGATCGTACTGAAGAGCAGTTTTTCATTGAGGAAGAAAAGGAGAAAAGGTTAGAGGAAATGTTTGATGCTGATCTTGACAATGCATTTGAAAGCAATTATGCACTGAAGGAAGAAATACCAGAGGAGGGAGCAGTGGCCGTAGCTGGGAAAAAAACCGAGGAAACCCTTACCGCTACAGACTTAATTATTGAGAGATTAGACATTGCAGAAAATGAGAAAAAGCGCATTAGTGAACATCAGGAGGAGGAGAAAATCAATAAAAATGCTGTTTTCCAGGCAAATCCGCTTATGAATGGCCGGTCACCTTCTGATTATGTTCTAAGTGCATTTAAAGATGTTCACTCGAATGATTTGGAGCAAACATTGTTGGCTTTACCTTTTTCAGATGCTTTGAAGCTTTTGTCATACTTGAAAGAATGGACTTCATATTCTGATAAGGTTGAGCTTGTTTGCCGCATAGGCACACTGCTGTTGCAGACACATTACAATCAGTTGCTTTCCACACCAGCTGCCAGACCTGTCTTAACCGACTTCAGTGACATTTTCTATGAGAGAGTCAAGGGTTGGAAAGATATCTTTGGTTTTAACCTTGCAGCCATGGATCATATCCAGCAACTGATGGCTTCAAGATCAGATGCTCTTTTCCGGGATGCAAGATCAAAACTGCTGGAGATACGTTCTCAACAATCCAAACGTTTACAAGATAGGTCAGATACTGGAGAGTTTTTGCGGAAGAAGAAAAAGAAGACAAAGTAA
Protein sequence

>Msa1174470

MVKAYLRYEPSASFGVIASVDSNISYDSSGKHLLSPALEKIGVWHVRQGICIKTLTPSVPCRGPSLAVTSIASSPSQLIAGGYGDGSIRLWDTDKGTCETTLNGHKGAVTALRYNKLGSLLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFVGSGKKLVTSSKDKFLRVWDIDTQHCMQIVGGHHSEIWTLDVDPGERFLVTGSADKELRFYSIKQDSVDGESVKDGGDSSVSNKWDVLTHFGEIQRQSKDRVATVQFNKSGNLLACHVAGKMVEIFRVLDDAEAKRKAKRRVNRKKEKKHGKEATEGTENGDAENKGDNSIVTDGPIETNKTVTVPDVFKLLHTIRASKKICSISFCPTTPKNSLATLALSLNNNLIEFYSIESGETKKTLGIDLEGHRSDVRSVTLSSDNTFLLSTSHNAVKIWNPSTGSCLRTIDSGYGLCSLILPTNKYGLVGTKEGTLEIIDIGSSTRVEAIEAHGGSVRTIAALPDKHGFVTGSQDHDVKFWEYQIKQKPGQATKQLTVSNVKTMRMNDDVLVVAISPDAKYIAVALLDSTVKIHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSIFAHKDSVMAVQFVPKTHYVFSVGKDRVVKYWDADKFEQLLTLEGHHADIWCLAVSNRGDFIVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFDADLDNAFESNYALKEEIPEEGAVAVAGKKTEETLTATDLIIERLDIAENEKKRISEHQEEEKINKNAVFQANPLMNGRSPSDYVLSAFKDVHSNDLEQTLLALPFSDALKLLSYLKEWTSYSDKVELVCRIGTLLLQTHYNQLLSTPAARPVLTDFSDIFYERVKGWKDIFGFNLAAMDHIQQLMASRSDALFRDARSKLLEIRSQQSKRLQDRSDTGEFLRKKKKKTK*