Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040510 | XP_003626088.2 | 80.213 | 470 | 15 | 6 | 4 | 409 | 6 | 461 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040510 | sp|Q84JS1|PAE6_ARATH | 59.569 | 371 | 87 | 4 | 55 | 362 | 48 | 418 | 6.06e-157 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040510 | A0A396H778 | 80.213 | 470 | 15 | 6 | 4 | 409 | 6 | 461 | 0.0 | 733 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1040510 | Msa1083250 | 0.916907 | 1.011123e-85 | -8.615850e-47 |
| Msa0296050 | Msa1040510 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
| Msa0526930 | Msa1040510 | 0.896383 | 3.887960e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040510 | MtrunA17_Chr7g0270931 | 80.213 | 470 | 15 | 6 | 4 | 409 | 6 | 461 | 0.0 | 733 |
| Msa1040510 | MtrunA17_Chr1g0193761 | 64.171 | 374 | 72 | 2 | 51 | 362 | 29 | 402 | 4.64e-178 | 502 |
| Msa1040510 | MtrunA17_Chr1g0193381 | 53.095 | 420 | 124 | 5 | 5 | 362 | 7 | 415 | 2.71e-154 | 442 |
| Msa1040510 | MtrunA17_Chr7g0271231 | 55.586 | 367 | 101 | 3 | 59 | 363 | 53 | 419 | 1.41e-148 | 427 |
| Msa1040510 | MtrunA17_Chr4g0069571 | 57.337 | 368 | 95 | 4 | 58 | 363 | 54 | 421 | 5.85e-146 | 421 |
| Msa1040510 | MtrunA17_Chr5g0408881 | 43.094 | 362 | 142 | 6 | 62 | 359 | 29 | 390 | 5.70e-106 | 320 |
| Msa1040510 | MtrunA17_Chr5g0418101 | 36.438 | 365 | 164 | 9 | 61 | 361 | 41 | 401 | 1.23e-70 | 228 |
| Msa1040510 | MtrunA17_Chr8g0369651 | 46.023 | 176 | 93 | 1 | 187 | 362 | 219 | 392 | 1.80e-55 | 187 |
| Msa1040510 | MtrunA17_Chr8g0369651 | 48.980 | 147 | 73 | 1 | 58 | 202 | 24 | 170 | 4.88e-48 | 168 |
| Msa1040510 | MtrunA17_Chr8g0369681 | 46.023 | 176 | 93 | 1 | 187 | 362 | 218 | 391 | 6.04e-55 | 187 |
| Msa1040510 | MtrunA17_Chr8g0369681 | 46.243 | 173 | 88 | 2 | 55 | 222 | 20 | 192 | 2.14e-49 | 172 |
| Msa1040510 | MtrunA17_Chr1g0203101 | 48.555 | 173 | 84 | 2 | 57 | 224 | 34 | 206 | 7.04e-52 | 179 |
| Msa1040510 | MtrunA17_Chr1g0203101 | 47.312 | 186 | 94 | 3 | 179 | 361 | 221 | 405 | 2.50e-49 | 172 |
| Msa1040510 | MtrunA17_Chr1g0203121 | 47.399 | 173 | 86 | 2 | 57 | 224 | 34 | 206 | 6.82e-51 | 176 |
| Msa1040510 | MtrunA17_Chr1g0203121 | 46.774 | 186 | 95 | 3 | 179 | 361 | 221 | 405 | 2.72e-48 | 169 |
| Msa1040510 | MtrunA17_Chr7g0238491 | 55.556 | 144 | 62 | 1 | 61 | 202 | 56 | 199 | 7.39e-51 | 176 |
| Msa1040510 | MtrunA17_Chr7g0238491 | 43.902 | 164 | 87 | 2 | 202 | 362 | 264 | 425 | 3.39e-43 | 156 |
| Msa1040510 | MtrunA17_Chr1g0163701 | 56.250 | 80 | 35 | 0 | 203 | 282 | 293 | 372 | 2.06e-22 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040510 | AT3G62060.2 | 58.594 | 384 | 96 | 4 | 55 | 375 | 48 | 431 | 9.96e-160 | 457 |
| Msa1040510 | AT3G62060.1 | 59.569 | 371 | 87 | 4 | 55 | 362 | 48 | 418 | 6.16e-158 | 452 |
| Msa1040510 | AT2G46930.1 | 51.422 | 422 | 131 | 5 | 4 | 363 | 7 | 416 | 1.55e-147 | 425 |
| Msa1040510 | AT5G23870.1 | 43.207 | 368 | 141 | 6 | 62 | 361 | 35 | 402 | 2.46e-103 | 312 |
| Msa1040510 | AT5G23870.4 | 43.207 | 368 | 141 | 6 | 62 | 361 | 35 | 402 | 2.46e-103 | 312 |
| Msa1040510 | AT5G23870.2 | 43.207 | 368 | 141 | 6 | 62 | 361 | 35 | 402 | 4.26e-103 | 313 |
| Msa1040510 | AT5G23870.3 | 43.207 | 368 | 141 | 6 | 62 | 361 | 35 | 402 | 4.80e-103 | 313 |
| Msa1040510 | AT5G45280.2 | 39.058 | 361 | 155 | 6 | 62 | 357 | 24 | 384 | 3.16e-93 | 286 |
| Msa1040510 | AT3G09405.1 | 39.211 | 380 | 164 | 5 | 43 | 357 | 32 | 409 | 2.02e-92 | 284 |
| Msa1040510 | AT1G09550.1 | 43.895 | 344 | 130 | 6 | 60 | 341 | 40 | 382 | 1.01e-91 | 282 |
| Msa1040510 | AT3G05910.2 | 78.472 | 144 | 30 | 1 | 59 | 202 | 50 | 192 | 3.20e-80 | 249 |
| Msa1040510 | AT1G57590.1 | 65.644 | 163 | 56 | 0 | 200 | 362 | 280 | 442 | 8.88e-79 | 250 |
| Msa1040510 | AT1G57590.1 | 73.944 | 142 | 37 | 0 | 61 | 202 | 79 | 220 | 1.39e-75 | 242 |
| Msa1040510 | AT3G05910.1 | 64.417 | 163 | 58 | 0 | 200 | 362 | 252 | 414 | 1.36e-78 | 249 |
| Msa1040510 | AT3G05910.1 | 78.472 | 144 | 30 | 1 | 59 | 202 | 50 | 192 | 3.58e-78 | 248 |
| Msa1040510 | AT5G26670.1 | 76.389 | 144 | 34 | 0 | 59 | 202 | 50 | 193 | 1.42e-77 | 246 |
| Msa1040510 | AT5G26670.1 | 65.217 | 161 | 56 | 0 | 202 | 362 | 255 | 415 | 1.03e-76 | 244 |
| Msa1040510 | AT5G26670.3 | 65.217 | 161 | 56 | 0 | 202 | 362 | 137 | 297 | 1.53e-77 | 242 |
| Msa1040510 | AT5G26670.3 | 73.333 | 75 | 20 | 0 | 128 | 202 | 1 | 75 | 3.89e-33 | 126 |
| Msa1040510 | AT5G26670.2 | 65.217 | 161 | 56 | 0 | 202 | 362 | 137 | 297 | 1.53e-77 | 242 |
| Msa1040510 | AT5G26670.2 | 73.333 | 75 | 20 | 0 | 128 | 202 | 1 | 75 | 3.89e-33 | 126 |
| Msa1040510 | AT5G26670.4 | 65.217 | 161 | 56 | 0 | 202 | 362 | 137 | 297 | 1.53e-77 | 242 |
| Msa1040510 | AT5G26670.4 | 73.333 | 75 | 20 | 0 | 128 | 202 | 1 | 75 | 3.89e-33 | 126 |
| Msa1040510 | AT5G45280.1 | 38.947 | 285 | 110 | 5 | 62 | 282 | 24 | 308 | 2.00e-68 | 221 |
| Msa1040510 | AT4G19410.1 | 33.795 | 361 | 174 | 5 | 62 | 357 | 24 | 384 | 5.97e-66 | 215 |
| Msa1040510 | AT3G09405.2 | 36.304 | 303 | 126 | 5 | 120 | 357 | 2 | 302 | 7.92e-63 | 204 |
| Msa1040510 | AT4G19410.2 | 33.430 | 344 | 165 | 4 | 62 | 341 | 24 | 367 | 1.60e-60 | 204 |
| Msa1040510 | AT4G19420.1 | 50.943 | 159 | 78 | 0 | 204 | 362 | 231 | 389 | 3.87e-58 | 195 |
| Msa1040510 | AT4G19420.1 | 58.503 | 147 | 59 | 1 | 58 | 202 | 21 | 167 | 2.17e-55 | 188 |
| Msa1040510 | AT4G19420.2 | 50.943 | 159 | 78 | 0 | 204 | 362 | 231 | 389 | 3.87e-58 | 195 |
| Msa1040510 | AT4G19420.2 | 58.503 | 147 | 59 | 1 | 58 | 202 | 21 | 167 | 2.17e-55 | 188 |
| Msa1040510 | AT4G19420.3 | 46.226 | 212 | 107 | 4 | 58 | 262 | 21 | 232 | 4.58e-57 | 189 |
| Msa1040510 | AT4G19420.4 | 58.503 | 147 | 59 | 1 | 58 | 202 | 21 | 167 | 2.52e-55 | 189 |
| Msa1040510 | AT4G19420.4 | 41.753 | 194 | 78 | 1 | 204 | 362 | 231 | 424 | 4.97e-51 | 177 |
| Msa1040510 | AT3G09410.3 | 50.602 | 166 | 79 | 1 | 40 | 202 | 39 | 204 | 9.77e-53 | 181 |
| Msa1040510 | AT3G09410.3 | 42.063 | 126 | 73 | 0 | 202 | 327 | 266 | 391 | 2.86e-32 | 126 |
| Msa1040510 | AT3G09410.1 | 50.602 | 166 | 79 | 1 | 40 | 202 | 39 | 204 | 2.30e-52 | 181 |
| Msa1040510 | AT3G09410.1 | 43.827 | 162 | 91 | 0 | 202 | 363 | 266 | 427 | 1.40e-47 | 168 |
Find 125 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGGAGGATCTGAATT+TGG | 0.129041 | 7_1:-77871229 | None:intergenic |
| TTGCAATTGCCGTTGGAAAT+TGG | 0.232831 | 7_1:+77871775 | Msa1040510:CDS |
| TGAGAATCAAGTGAGTATTA+TGG | 0.246552 | 7_1:-77873903 | None:intergenic |
| GAGAATCAAGTGAGTATTAT+GGG | 0.317221 | 7_1:-77873902 | None:intergenic |
| AATGCGGGGCTAGACTTTCT+TGG | 0.319923 | 7_1:-77871145 | None:intergenic |
| AATTTAGAGGACAGAAAATA+TGG | 0.324688 | 7_1:+77869447 | Msa1040510:CDS |
| CTCACTTGAAGACCAGATTA+TGG | 0.340475 | 7_1:-77871857 | None:intergenic |
| CCAATTTGTTCTCCATCTAA+TGG | 0.344065 | 7_1:-77873659 | None:intergenic |
| CCATTAGATGGAGAACAAAT+TGG | 0.348817 | 7_1:+77873659 | Msa1040510:three_prime_UTR |
| GTGTATTATGAGCATGTAAT+TGG | 0.351968 | 7_1:-77873406 | None:intergenic |
| GCTGCACAGCTTCAATTTAG+AGG | 0.354360 | 7_1:+77869434 | Msa1040510:CDS |
| AATCAGAAAATTACCGAAGT+TGG | 0.357974 | 7_1:-77870797 | None:intergenic |
| ACTTTGGAGGATCTGAATTT+GGG | 0.360290 | 7_1:-77871228 | None:intergenic |
| TACCACTTCCATCCCGGATC+TGG | 0.372412 | 7_1:+77868426 | Msa1040510:CDS |
| ATAATGTTTGTCAGTATGTT+TGG | 0.373579 | 7_1:+77868386 | Msa1040510:intron |
| TTCCATCCCGGATCTGGATC+TGG | 0.382531 | 7_1:+77868432 | Msa1040510:CDS |
| TCTCTCACCTCGGGATATCT+TGG | 0.388144 | 7_1:+77868012 | Msa1040510:CDS |
| TCATAAGAGGTTGAGGCAGC+AGG | 0.400505 | 7_1:-77868084 | None:intergenic |
| TTTCCAACGGCAATTGCAAT+TGG | 0.408970 | 7_1:-77871771 | None:intergenic |
| ACAAGAATTTATGAATAATC+CGG | 0.416697 | 7_1:-77871404 | None:intergenic |
| TGACAATACCTGCCATAATC+TGG | 0.417076 | 7_1:+77871845 | Msa1040510:CDS |
| CAGCAGATCCTCATGGATCT+TGG | 0.417631 | 7_1:+77871168 | Msa1040510:CDS |
| TCATGCATACCATGTTGTTA+AGG | 0.424811 | 7_1:-77871483 | None:intergenic |
| TCCAATATGGAAAACCTTGT+TGG | 0.438519 | 7_1:-77869513 | None:intergenic |
| GATATAATGAGGCCATTAGA+TGG | 0.438882 | 7_1:+77873647 | Msa1040510:three_prime_UTR |
| CACTCTCCAATGTGTGGTAC+TGG | 0.439348 | 7_1:-77867876 | None:intergenic |
| GGAAATATTCTCTATGCTAC+AGG | 0.444665 | 7_1:+77873578 | Msa1040510:three_prime_UTR |
| GCTTGAAGTTACAAGATTCA+AGG | 0.445102 | 7_1:+77873498 | Msa1040510:three_prime_UTR |
| AGAGTGAGTGGGATCATAAG+AGG | 0.448337 | 7_1:-77868097 | None:intergenic |
| ATCAGAAAATTACCGAAGTT+GGG | 0.457711 | 7_1:-77870796 | None:intergenic |
| CGATGTCGTTTCAGTTCCAT+TGG | 0.458197 | 7_1:+77868039 | Msa1040510:CDS |
| CAGTAGTAAAATAAGAGTAT+AGG | 0.460029 | 7_1:-77873764 | None:intergenic |
| AAATAGTTGGCTCATTCAAT+TGG | 0.461267 | 7_1:+77868458 | Msa1040510:CDS |
| CATGAGGATCTGCTGAATGC+GGG | 0.468931 | 7_1:-77871160 | None:intergenic |
| TTGCTCAATAATCCAGTGAA+TGG | 0.470456 | 7_1:-77868700 | None:intergenic |
| AAAAGTCAACCTTGTGGAGC+GGG | 0.473868 | 7_1:-77873350 | None:intergenic |
| GTAGCCTGTAGGTGGTTGAT+TGG | 0.479626 | 7_1:+77873612 | Msa1040510:three_prime_UTR |
| TAGCCTGTAGGTGGTTGATT+GGG | 0.485955 | 7_1:+77873613 | Msa1040510:three_prime_UTR |
| CTGGATCTGGTGCAAATAGT+TGG | 0.489001 | 7_1:+77868445 | Msa1040510:CDS |
| ACGATCGATTTGTTAATCAA+TGG | 0.490547 | 7_1:+77873879 | Msa1040510:three_prime_UTR |
| CAGCCAATTGCAATTGCCGT+TGG | 0.493619 | 7_1:+77871768 | Msa1040510:intron |
| AGTATAGGCATTATCATGTT+GGG | 0.494420 | 7_1:-77873749 | None:intergenic |
| TCAAAGTGAGGTACTGTGAT+GGG | 0.499780 | 7_1:+77868855 | Msa1040510:CDS |
| GAAAGTATGCCAGGTTGGAA+TGG | 0.504383 | 7_1:+77873557 | Msa1040510:three_prime_UTR |
| GACACTAGTGAAAGTATGCC+AGG | 0.505135 | 7_1:+77873548 | Msa1040510:three_prime_UTR |
| TGTTTGGATGGAACTTTACC+TGG | 0.506783 | 7_1:+77868402 | Msa1040510:CDS |
| ATGCTATGTACAAGTGGTGT+TGG | 0.507359 | 7_1:+77873689 | Msa1040510:three_prime_UTR |
| CCTGGTTACCACTTCCATCC+CGG | 0.507770 | 7_1:+77868420 | Msa1040510:CDS |
| ATTCCCAATCAACCACCTAC+AGG | 0.511550 | 7_1:-77873616 | None:intergenic |
| AGGTTGAGGCAGCAGGGGAG+AGG | 0.515308 | 7_1:-77868077 | None:intergenic |
| GAGTGTCAAAATTACTTTGG+AGG | 0.515481 | 7_1:-77871241 | None:intergenic |
| GGAGCTGATTCTAAAGGAGC+AGG | 0.516927 | 7_1:+77868127 | Msa1040510:CDS |
| ATTATGGCAGGTATTGTCAC+AGG | 0.520288 | 7_1:-77871841 | None:intergenic |
| ATCCATGGAGCTGATTCTAA+AGG | 0.520353 | 7_1:+77868121 | Msa1040510:CDS |
| ATTTGCACCAGATCCAGATC+CGG | 0.521168 | 7_1:-77868439 | None:intergenic |
| TCTAAAGACACAACTTCTGA+TGG | 0.522097 | 7_1:-77868632 | None:intergenic |
| CATAAGAGGTTGAGGCAGCA+GGG | 0.523839 | 7_1:-77868083 | None:intergenic |
| ATGTACAAGTGGTGTTGGAT+TGG | 0.524461 | 7_1:+77873694 | Msa1040510:three_prime_UTR |
| AATAAAGCTGAAGAAAATCC+TGG | 0.528355 | 7_1:+77868721 | Msa1040510:CDS |
| CTCCTTTAGAATCAGCTCCA+TGG | 0.530569 | 7_1:-77868123 | None:intergenic |
| CCGGGATGGAAGTGGTAACC+AGG | 0.532137 | 7_1:-77868420 | None:intergenic |
| AGTGGGATCATAAGAGGTTG+AGG | 0.532479 | 7_1:-77868091 | None:intergenic |
| TAGTTGGCTCATTCAATTGG+AGG | 0.533513 | 7_1:+77868461 | Msa1040510:CDS |
| ATCCAGATCCGGGATGGAAG+TGG | 0.540621 | 7_1:-77868428 | None:intergenic |
| GAGTATAGGCATTATCATGT+TGG | 0.547332 | 7_1:-77873750 | None:intergenic |
| ACGCGGTTCCTCAAAATACA+TGG | 0.548149 | 7_1:+77868666 | Msa1040510:CDS |
| AATAGATACTTGATATAATG+AGG | 0.549303 | 7_1:+77873636 | Msa1040510:three_prime_UTR |
| CTTGAAGACCAGATTATGGC+AGG | 0.552753 | 7_1:-77871853 | None:intergenic |
| TTTGCACCAGATCCAGATCC+GGG | 0.553031 | 7_1:-77868438 | None:intergenic |
| TGTGATGGGGCGTCTTTCAG+TGG | 0.553061 | 7_1:+77868869 | Msa1040510:CDS |
| TGCATACCATGTTGTTAAGG+AGG | 0.557052 | 7_1:-77871480 | None:intergenic |
| GACACAGAATCTCTCACCTC+GGG | 0.557126 | 7_1:+77868003 | Msa1040510:CDS |
| GCATACCATGTTGTTAAGGA+GGG | 0.557350 | 7_1:-77871479 | None:intergenic |
| ATCCCACTCACTCTTATCCA+TGG | 0.557640 | 7_1:+77868106 | Msa1040510:CDS |
| CACCAGATCCAGATCCGGGA+TGG | 0.559180 | 7_1:-77868434 | None:intergenic |
| TAAAAGTCAACCTTGTGGAG+CGG | 0.562003 | 7_1:-77873351 | None:intergenic |
| TGTTTGTCAGTATGTTTGGA+TGG | 0.563064 | 7_1:+77868390 | Msa1040510:intron |
| AAATTACCGAAGTTGGGTCC+AGG | 0.563109 | 7_1:-77870790 | None:intergenic |
| CCGCATTCAGCAGATCCTCA+TGG | 0.567304 | 7_1:+77871161 | Msa1040510:CDS |
| TGCTATATTCCCGCTCCACA+AGG | 0.567311 | 7_1:+77873341 | Msa1040510:CDS |
| CAGTGTTGGTAAATCTGCCA+TGG | 0.575081 | 7_1:+77873188 | Msa1040510:intron |
| TGCAGCTTATGATGCATGGC+AGG | 0.576179 | 7_1:+77870950 | Msa1040510:CDS |
| ATGTATCTTGTCTCTCCGAT+TGG | 0.579548 | 7_1:-77871438 | None:intergenic |
| ATTGAAGAATTAATGTCGAA+GGG | 0.581479 | 7_1:+77869479 | Msa1040510:CDS |
| TAACCACCTGGACCCAACTT+CGG | 0.583326 | 7_1:+77870784 | Msa1040510:CDS |
| ATAAGAGGTTGAGGCAGCAG+GGG | 0.585204 | 7_1:-77868082 | None:intergenic |
| CTCTCCCCTCCTTAACAACA+TGG | 0.586154 | 7_1:+77871474 | Msa1040510:CDS |
| AATTGAAGAATTAATGTCGA+AGG | 0.586251 | 7_1:+77869478 | Msa1040510:CDS |
| AGAATATTTCCATTCCAACC+TGG | 0.593642 | 7_1:-77873566 | None:intergenic |
| CTAGTGAAAGTATGCCAGGT+TGG | 0.594005 | 7_1:+77873552 | Msa1040510:three_prime_UTR |
| CTGATGCTGTAGCCTGTAGG+TGG | 0.594319 | 7_1:+77873604 | Msa1040510:three_prime_UTR |
| CCATGAGGATCTGCTGAATG+CGG | 0.598787 | 7_1:-77871161 | None:intergenic |
| ATTCTGATGCTGTAGCCTGT+AGG | 0.603970 | 7_1:+77873601 | Msa1040510:three_prime_UTR |
| GTCAAAGTGAGGTACTGTGA+TGG | 0.606987 | 7_1:+77868854 | Msa1040510:CDS |
| TGAATGCAGCTTATGATGCA+TGG | 0.609693 | 7_1:+77870946 | Msa1040510:CDS |
| TGTGGAGCGGGAATATAGCA+TGG | 0.616004 | 7_1:-77873338 | None:intergenic |
| ATTACATGCTCATAATACAC+TGG | 0.616690 | 7_1:+77873409 | Msa1040510:exon |
| GATGAACGCATAGCTGCCAA+TGG | 0.622713 | 7_1:-77868055 | None:intergenic |
| TTAAAATTCGAATTACACAA+TGG | 0.623052 | 7_1:+77873437 | Msa1040510:three_prime_UTR |
| CGGGAATATAGCATGGAGGT+AGG | 0.623170 | 7_1:-77873331 | None:intergenic |
| CATACCATGTTGTTAAGGAG+GGG | 0.624484 | 7_1:-77871478 | None:intergenic |
| CTCCATGGATAAGAGTGAGT+GGG | 0.625974 | 7_1:-77868108 | None:intergenic |
| TGACACGAGAAAATAAAGAT+CGG | 0.626389 | 7_1:+77867839 | None:intergenic |
| ATGAGGATCTGCTGAATGCG+GGG | 0.632595 | 7_1:-77871159 | None:intergenic |
| GGGAATGAAGAACGCCAACA+AGG | 0.633094 | 7_1:+77869499 | Msa1040510:CDS |
| AATCGGAGAGACAAGATACA+TGG | 0.638574 | 7_1:+77871440 | Msa1040510:CDS |
| GCTCCATGGATAAGAGTGAG+TGG | 0.639842 | 7_1:-77868109 | None:intergenic |
| CAAAGTGAGGTACTGTGATG+GGG | 0.646787 | 7_1:+77868856 | Msa1040510:CDS |
| CAAATGCTAAATGACATCAA+AGG | 0.647217 | 7_1:+77871361 | Msa1040510:CDS |
| AGACACAGAATCTCTCACCT+CGG | 0.647432 | 7_1:+77868002 | Msa1040510:CDS |
| GCTGCATTCAGCAGAAACAG+TGG | 0.652873 | 7_1:-77870933 | None:intergenic |
| AAAGATCCAGTACCACACAT+TGG | 0.653893 | 7_1:+77867870 | Msa1040510:five_prime_UTR |
| TGCACTCACTCTCCAATGTG+TGG | 0.656311 | 7_1:-77867882 | None:intergenic |
| TTATGGCAGGTATTGTCACA+GGG | 0.675845 | 7_1:-77871840 | None:intergenic |
| CAATTATTCCAAGATCCATG+AGG | 0.680551 | 7_1:-77871176 | None:intergenic |
| TTACCGAAGTTGGGTCCAGG+TGG | 0.682863 | 7_1:-77870787 | None:intergenic |
| CAGTGGAGACAGTCAAAACG+AGG | 0.693681 | 7_1:+77868886 | Msa1040510:CDS |
| GCAATGATGCTATGTACAAG+TGG | 0.693869 | 7_1:+77873683 | Msa1040510:three_prime_UTR |
| ACTGGAACAGAGTCAAAGTG+AGG | 0.697951 | 7_1:+77868843 | Msa1040510:CDS |
| TGGTAGACTCTCAATCCACA+AGG | 0.698984 | 7_1:+77873208 | Msa1040510:CDS |
| AGCACTAAAAGTCAACCTTG+TGG | 0.700041 | 7_1:-77873356 | None:intergenic |
| GATCTCGTGAGATCTAACTG+AGG | 0.728818 | 7_1:-77867975 | None:intergenic |
| TATGGCAGGTATTGTCACAG+GGG | 0.750427 | 7_1:-77871839 | None:intergenic |
| TGTGGATTGAGAGTCTACCA+TGG | 0.760817 | 7_1:-77873205 | None:intergenic |
| GGAGCGGGAATATAGCATGG+AGG | 0.783882 | 7_1:-77873335 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATAAATTTTTAAATT+TGG | + | chr7_1:77870204-77870223 | Msa1040510:intron | 0.0% |
| !!! | AGTTTTTTTTCTATAAAATT+AGG | + | chr7_1:77870146-77870165 | Msa1040510:intron | 10.0% |
| !!! | TATAAATTTTTAAATTTGGT+AGG | + | chr7_1:77870208-77870227 | Msa1040510:intron | 10.0% |
| !!! | ATGATTTTTTTTTTTTTTTC+AGG | + | chr7_1:77870325-77870344 | Msa1040510:intron | 10.0% |
| !! | TACTTAGTTAAATTATTCTT+TGG | + | chr7_1:77869012-77869031 | Msa1040510:intron | 15.0% |
| !!! | TCTAAATATTGATAGTTATT+GGG | - | chr7_1:77869963-77869982 | None:intergenic | 15.0% |
| !! | TTGTTATAGAAAAACATTAT+TGG | + | chr7_1:77871962-77871981 | Msa1040510:intron | 15.0% |
| !! | TTGCTTTAATAAAATTTCTT+TGG | + | chr7_1:77872030-77872049 | Msa1040510:intron | 15.0% |
| !!! | TAAAAGTATAATATCTTCAA+GGG | - | chr7_1:77872088-77872107 | None:intergenic | 15.0% |
| !!! | ATAAAAGTATAATATCTTCA+AGG | - | chr7_1:77872089-77872108 | None:intergenic | 15.0% |
| !! | AAGTTAATAAAATGATAGAT+TGG | + | chr7_1:77872183-77872202 | Msa1040510:intron | 15.0% |
| !! | TTATGATAAATTTCAATGAT+AGG | + | chr7_1:77872282-77872301 | Msa1040510:intron | 15.0% |
| !! | ATTTAAATGTGAAATTTCAA+TGG | + | chr7_1:77872532-77872551 | Msa1040510:intron | 15.0% |
| !!! | GTTATGTGTTATAATTTTTG+TGG | + | chr7_1:77868791-77868810 | Msa1040510:intron | 20.0% |
| !!! | TTTTTCCAATTTTTGTTAAG+AGG | + | chr7_1:77868938-77868957 | Msa1040510:intron | 20.0% |
| !! | AAAATCCTCTTAACAAAAAT+TGG | - | chr7_1:77868946-77868965 | None:intergenic | 20.0% |
| !! | TGTATGTCAATGATAATAAT+AGG | - | chr7_1:77868975-77868994 | None:intergenic | 20.0% |
| !!! | AATTATTCTTTGGAAATTTG+TGG | + | chr7_1:77869022-77869041 | Msa1040510:intron | 20.0% |
| !!! | AAATCTCTTTTCTAATGAAT+GGG | + | chr7_1:77869343-77869362 | Msa1040510:intron | 20.0% |
| !! | GTTTCAAGAATAATATAAGA+GGG | - | chr7_1:77869896-77869915 | None:intergenic | 20.0% |
| !! | CTCTTATATTATTCTTGAAA+CGG | + | chr7_1:77869895-77869914 | Msa1040510:intron | 20.0% |
| !!! | GAAGATTTTCAATAATCAAT+GGG | - | chr7_1:77869941-77869960 | None:intergenic | 20.0% |
| !!! | CTCTAAATATTGATAGTTAT+TGG | - | chr7_1:77869964-77869983 | None:intergenic | 20.0% |
| !! | GTAAAGTTTCCAAAATTTAT+GGG | - | chr7_1:77870004-77870023 | None:intergenic | 20.0% |
| !! | CACATTAAAACAACTTAAAT+AGG | - | chr7_1:77870096-77870115 | None:intergenic | 20.0% |
| !! | ACAAGAATTTATGAATAATC+CGG | - | chr7_1:77871407-77871426 | None:intergenic | 20.0% |
| !! | TAGAGACTAAAAATTATTTG+TGG | + | chr7_1:77871617-77871636 | Msa1040510:intron | 20.0% |
| !! | AAGAATGATAAATTCACAAA+TGG | - | chr7_1:77871940-77871959 | None:intergenic | 20.0% |
| !!! | CATTTTATTAACTTGAAAAG+TGG | - | chr7_1:77872177-77872196 | None:intergenic | 20.0% |
| !! | TCAATCTATCAAATATGATT+TGG | + | chr7_1:77872416-77872435 | Msa1040510:intron | 20.0% |
| !! | TAAATTCATCATTACAAAAC+TGG | + | chr7_1:77872988-77873007 | Msa1040510:intron | 20.0% |
| !! | TTAAAATTCGAATTACACAA+TGG | + | chr7_1:77873437-77873456 | Msa1040510:three_prime_UTR | 20.0% |
| !! | AATAGATACTTGATATAATG+AGG | + | chr7_1:77873636-77873655 | Msa1040510:three_prime_UTR | 20.0% |
| ! | ATAACAAAGAAAAACGTTAC+TGG | - | chr7_1:77867953-77867972 | None:intergenic | 25.0% |
| ! | TATGTATGCAATAACATGAT+AGG | - | chr7_1:77868192-77868211 | None:intergenic | 25.0% |
| ! | ATAATGTTTGTCAGTATGTT+TGG | + | chr7_1:77868386-77868405 | Msa1040510:intron | 25.0% |
| !!! | ATGTTCAAGTATTTTGATCA+TGG | + | chr7_1:77868485-77868504 | Msa1040510:intron | 25.0% |
| !! | TGTTTGAAAACTTTTCTTCA+GGG | + | chr7_1:77868592-77868611 | Msa1040510:intron | 25.0% |
| !!! | TTGTTTTTCCATGTATTTTG+AGG | - | chr7_1:77868677-77868696 | None:intergenic | 25.0% |
| !! | AAAAAACACCATTCATTTTG+TGG | + | chr7_1:77869049-77869068 | Msa1040510:intron | 25.0% |
| !!! | TTTATTAGTCTTTGCTAGTA+TGG | + | chr7_1:77869317-77869336 | Msa1040510:intron | 25.0% |
| !! | GAAATCTCTTTTCTAATGAA+TGG | + | chr7_1:77869342-77869361 | Msa1040510:intron | 25.0% |
| ! | AATTTAGAGGACAGAAAATA+TGG | + | chr7_1:77869447-77869466 | Msa1040510:CDS | 25.0% |
| ! | AATTGAAGAATTAATGTCGA+AGG | + | chr7_1:77869478-77869497 | Msa1040510:CDS | 25.0% |
| ! | ATTGAAGAATTAATGTCGAA+GGG | + | chr7_1:77869479-77869498 | Msa1040510:CDS | 25.0% |
| ! | AAAATTACGACATTCCAATA+TGG | - | chr7_1:77869529-77869548 | None:intergenic | 25.0% |
| ! | GATTACAAAAAATGCGTTTA+GGG | - | chr7_1:77869851-77869870 | None:intergenic | 25.0% |
| ! | TGATTACAAAAAATGCGTTT+AGG | - | chr7_1:77869852-77869871 | None:intergenic | 25.0% |
| ! | CGTTTCAAGAATAATATAAG+AGG | - | chr7_1:77869897-77869916 | None:intergenic | 25.0% |
| !! | ATAATCAATGGGTTTAATGA+GGG | - | chr7_1:77869930-77869949 | None:intergenic | 25.0% |
| !! | AATAATCAATGGGTTTAATG+AGG | - | chr7_1:77869931-77869950 | None:intergenic | 25.0% |
| !! | GGAAGATTTTCAATAATCAA+TGG | - | chr7_1:77869942-77869961 | None:intergenic | 25.0% |
| ! | CAAAATTTATGGGTGTATAT+TGG | - | chr7_1:77869994-77870013 | None:intergenic | 25.0% |
| !! | CAATATACACCCATAAATTT+TGG | + | chr7_1:77869992-77870011 | Msa1040510:intron | 25.0% |
| ! | GGTAAAGTTTCCAAAATTTA+TGG | - | chr7_1:77870005-77870024 | None:intergenic | 25.0% |
| ! | AAAAAAATCATTAGCATCCA+AGG | - | chr7_1:77870316-77870335 | None:intergenic | 25.0% |
| ! | ACAATTATATCCAAGTTTAC+AGG | - | chr7_1:77870521-77870540 | None:intergenic | 25.0% |
| !! | ATACAAGTTTTCTAACAGAA+AGG | - | chr7_1:77870696-77870715 | None:intergenic | 25.0% |
| !! | AATCTTTTCCTCTTCTATTT+CGG | + | chr7_1:77871564-77871583 | Msa1040510:intron | 25.0% |
| !! | TTCTGAGAACAATAAAGAAA+GGG | - | chr7_1:77871713-77871732 | None:intergenic | 25.0% |
| !! | TTTCTGAGAACAATAAAGAA+AGG | - | chr7_1:77871714-77871733 | None:intergenic | 25.0% |
| ! | ATCAAAAAACCAATTTCCAA+CGG | - | chr7_1:77871787-77871806 | None:intergenic | 25.0% |
| !! | TAGAAAAACATTATTGGCTA+AGG | + | chr7_1:77871968-77871987 | Msa1040510:intron | 25.0% |
| ! | GGTCTATTATATTCACTTAT+AGG | + | chr7_1:77872007-77872026 | Msa1040510:intron | 25.0% |
| !! | ATCCAATTATAATTTTCCCA+AGG | + | chr7_1:77872107-77872126 | Msa1040510:intron | 25.0% |
| ! | TTTGAGTCATTACAATTCAT+TGG | + | chr7_1:77872319-77872338 | Msa1040510:intron | 25.0% |
| ! | TGGAATGATTACATTTGAAA+TGG | + | chr7_1:77872366-77872385 | Msa1040510:intron | 25.0% |
| !!! | CTTTTGTTTATATTTGAGTC+CGG | + | chr7_1:77872439-77872458 | Msa1040510:intron | 25.0% |
| !!! | GGGTTGATTTTAAGATTTAA+GGG | - | chr7_1:77872583-77872602 | None:intergenic | 25.0% |
| !!! | TGGGTTGATTTTAAGATTTA+AGG | - | chr7_1:77872584-77872603 | None:intergenic | 25.0% |
| ! | CTTAAAATCAACCCAATATT+CGG | + | chr7_1:77872589-77872608 | Msa1040510:intron | 25.0% |
| ! | TTAAAATCAACCCAATATTC+GGG | + | chr7_1:77872590-77872609 | Msa1040510:intron | 25.0% |
| ! | TGAATTAGAGAAAAGAAAGA+AGG | - | chr7_1:77873133-77873152 | None:intergenic | 25.0% |
| !!! | TAAGAATTTTAGTTCCATCA+TGG | - | chr7_1:77873285-77873304 | None:intergenic | 25.0% |
| !! | CAGTAGTAAAATAAGAGTAT+AGG | - | chr7_1:77873767-77873786 | None:intergenic | 25.0% |
| TACTCTCATTACTCGATATA+AGG | + | chr7_1:77868160-77868179 | Msa1040510:intron | 30.0% | |
| ACTCTCATTACTCGATATAA+GGG | + | chr7_1:77868161-77868180 | Msa1040510:intron | 30.0% | |
| ACATGAAATAGCCTAAACAA+AGG | - | chr7_1:77868285-77868304 | None:intergenic | 30.0% | |
| TTTCATGTCTTCACTATTCA+TGG | + | chr7_1:77868297-77868316 | Msa1040510:intron | 30.0% | |
| ! | ACCTAGTATTTTGTCTCAAA+TGG | + | chr7_1:77868335-77868354 | Msa1040510:intron | 30.0% |
| ! | TCCATTTGAGACAAAATACT+AGG | - | chr7_1:77868339-77868358 | None:intergenic | 30.0% |
| ! | AAATAGTTGGCTCATTCAAT+TGG | + | chr7_1:77868458-77868477 | Msa1040510:CDS | 30.0% |
| !!! | AGTATTTTGATCATGGATCT+CGG | + | chr7_1:77868492-77868511 | Msa1040510:intron | 30.0% |
| ! | CTGAAGAAAAGTTTTCAAAC+AGG | - | chr7_1:77868593-77868612 | None:intergenic | 30.0% |
| ! | CTGTTTGAAAACTTTTCTTC+AGG | + | chr7_1:77868591-77868610 | Msa1040510:intron | 30.0% |
| AATAAAGCTGAAGAAAATCC+TGG | + | chr7_1:77868721-77868740 | Msa1040510:CDS | 30.0% | |
| !!! | TGTGCACAGATTTTTTTAAC+TGG | + | chr7_1:77868825-77868844 | Msa1040510:intron | 30.0% |
| ! | GCAAATGTACATTTTTCTTG+TGG | + | chr7_1:77869238-77869257 | Msa1040510:intron | 30.0% |
| GTATGAATTCACAAGTCAAT+TGG | - | chr7_1:77869405-77869424 | None:intergenic | 30.0% | |
| TATTCAATCATAGATGTCCA+TGG | + | chr7_1:77869550-77869569 | Msa1040510:intron | 30.0% | |
| !!! | CGCATTTTTTGTAATCAGAA+AGG | + | chr7_1:77869855-77869874 | Msa1040510:intron | 30.0% |
| TATGAATATGGGAATTGCAT+TGG | - | chr7_1:77870026-77870045 | None:intergenic | 30.0% | |
| GAGTTGAGTACTATGAATAT+GGG | - | chr7_1:77870037-77870056 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAGGCTCTTTTATC+TGG | + | chr7_1:77870338-77870357 | Msa1040510:intron | 30.0% |
| !! | TAGATTTTGGAAACAAGCTT+TGG | - | chr7_1:77870409-77870428 | None:intergenic | 30.0% |
| ! | CATTTCACTTTGGTAGATTT+TGG | - | chr7_1:77870422-77870441 | None:intergenic | 30.0% |
| ATCACTCAAACATTTCACTT+TGG | - | chr7_1:77870432-77870451 | None:intergenic | 30.0% | |
| TCATGTAGAACTGATATATC+TGG | + | chr7_1:77870553-77870572 | Msa1040510:intron | 30.0% | |
| CATGTAGAACTGATATATCT+GGG | + | chr7_1:77870554-77870573 | Msa1040510:intron | 30.0% | |
| ATGTAGAACTGATATATCTG+GGG | + | chr7_1:77870555-77870574 | Msa1040510:intron | 30.0% | |
| ATTGACGTCTTAGAAATTGT+AGG | + | chr7_1:77870730-77870749 | Msa1040510:intron | 30.0% | |
| ATCAGAAAATTACCGAAGTT+GGG | - | chr7_1:77870799-77870818 | None:intergenic | 30.0% | |
| AATCAGAAAATTACCGAAGT+TGG | - | chr7_1:77870800-77870819 | None:intergenic | 30.0% | |
| ! | ACATGATCGATCAAATTTTG+AGG | - | chr7_1:77870906-77870925 | None:intergenic | 30.0% |
| !! | AGAGAGTGTCAAAATTACTT+TGG | - | chr7_1:77871247-77871266 | None:intergenic | 30.0% |
| CAAATGCTAAATGACATCAA+AGG | + | chr7_1:77871361-77871380 | Msa1040510:CDS | 30.0% | |
| !! | ACTGTACTATTTTAGAAGCA+CGG | - | chr7_1:77871519-77871538 | None:intergenic | 30.0% |
| !! | TGCTTCTAAAATAGTACAGT+TGG | + | chr7_1:77871519-77871538 | Msa1040510:intron | 30.0% |
| CAAAGTTATTGTCTTTCGTA+CGG | + | chr7_1:77871881-77871900 | Msa1040510:intron | 30.0% | |
| ! | TAATGCAGACTCAGTAATTT+TGG | - | chr7_1:77872065-77872084 | None:intergenic | 30.0% |
| GTCCTTGGGAAAATTATAAT+TGG | - | chr7_1:77872112-77872131 | None:intergenic | 30.0% | |
| AAGTGGTGCAATTAAAAAGA+AGG | - | chr7_1:77872160-77872179 | None:intergenic | 30.0% | |
| GAGTCAATCTAGATTTCATA+AGG | + | chr7_1:77872220-77872239 | Msa1040510:intron | 30.0% | |
| TGACTCAAATGATCGATAAA+AGG | - | chr7_1:77872308-77872327 | None:intergenic | 30.0% | |
| ATTCCAAAAATACCCTTTCA+CGG | - | chr7_1:77872352-77872371 | None:intergenic | 30.0% | |
| TAAGGGATCATGATACAATA+GGG | - | chr7_1:77872566-77872585 | None:intergenic | 30.0% | |
| TTAAGGGATCATGATACAAT+AGG | - | chr7_1:77872567-77872586 | None:intergenic | 30.0% | |
| ATGTTGGATTGTATTGGAAT+AGG | + | chr7_1:77872719-77872738 | Msa1040510:intron | 30.0% | |
| !! | AATTTGTTGAGTGACTTGAA+TGG | + | chr7_1:77872799-77872818 | Msa1040510:intron | 30.0% |
| TAACTATCCAGTGTTCTATA+AGG | - | chr7_1:77872853-77872872 | None:intergenic | 30.0% | |
| CCTAATATCACAACTTAAGA+TGG | - | chr7_1:77872967-77872986 | None:intergenic | 30.0% | |
| ! | CCATCTTAAGTTGTGATATT+AGG | + | chr7_1:77872964-77872983 | Msa1040510:intron | 30.0% |
| TTCTTAAAATGAGACGATGT+AGG | - | chr7_1:77873096-77873115 | None:intergenic | 30.0% | |
| AAGAAAGAAGGTGAAATTTC+TGG | - | chr7_1:77873121-77873140 | None:intergenic | 30.0% | |
| GGAAATAAAAATGGAAGGAA+GGG | - | chr7_1:77873249-77873268 | None:intergenic | 30.0% | |
| AGATGGGAAATAAAAATGGA+AGG | - | chr7_1:77873254-77873273 | None:intergenic | 30.0% | |
| GTGTATTATGAGCATGTAAT+TGG | - | chr7_1:77873409-77873428 | None:intergenic | 30.0% | |
| ATTACATGCTCATAATACAC+TGG | + | chr7_1:77873409-77873428 | Msa1040510:exon | 30.0% | |
| AGTATAGGCATTATCATGTT+GGG | - | chr7_1:77873752-77873771 | None:intergenic | 30.0% | |
| !! | ACGATCGATTTGTTAATCAA+TGG | + | chr7_1:77873879-77873898 | Msa1040510:three_prime_UTR | 30.0% |
| GAGAATCAAGTGAGTATTAT+GGG | - | chr7_1:77873905-77873924 | None:intergenic | 30.0% | |
| TGAGAATCAAGTGAGTATTA+TGG | - | chr7_1:77873906-77873925 | None:intergenic | 30.0% | |
| ! | ATAGTGTGTGTCCTTTGTTT+AGG | + | chr7_1:77868271-77868290 | Msa1040510:intron | 35.0% |
| TGTTTGTCAGTATGTTTGGA+TGG | + | chr7_1:77868390-77868409 | Msa1040510:intron | 35.0% | |
| ! | TTGAAAACTTTTCTTCAGGG+AGG | + | chr7_1:77868595-77868614 | Msa1040510:intron | 35.0% |
| TCTAAAGACACAACTTCTGA+TGG | - | chr7_1:77868635-77868654 | None:intergenic | 35.0% | |
| TTTAGAAAAACTACTCGACG+CGG | + | chr7_1:77868649-77868668 | Msa1040510:CDS | 35.0% | |
| GAAAAACAACTACCATTCAC+TGG | + | chr7_1:77868688-77868707 | Msa1040510:CDS | 35.0% | |
| TTGCTCAATAATCCAGTGAA+TGG | - | chr7_1:77868703-77868722 | None:intergenic | 35.0% | |
| GCAGATTTCAGTACACATAT+GGG | - | chr7_1:77868769-77868788 | None:intergenic | 35.0% | |
| TGCAGATTTCAGTACACATA+TGG | - | chr7_1:77868770-77868789 | None:intergenic | 35.0% | |
| GAATCATGCCACAAAATGAA+TGG | - | chr7_1:77869060-77869079 | None:intergenic | 35.0% | |
| AGAGGTAAAACTATGGTTGT+TGG | + | chr7_1:77869114-77869133 | Msa1040510:intron | 35.0% | |
| GTTGGATTACTCTATTATCC+TGG | + | chr7_1:77869132-77869151 | Msa1040510:intron | 35.0% | |
| ! | CAAACATGATTTGTATGACC+AGG | - | chr7_1:77869153-77869172 | None:intergenic | 35.0% |
| ! | ATGTACATTTTTCTTGTGGC+AGG | + | chr7_1:77869242-77869261 | Msa1040510:intron | 35.0% |
| !! | ATTAGTCTTTGCTAGTATGG+AGG | + | chr7_1:77869320-77869339 | Msa1040510:intron | 35.0% |
| TCCAATATGGAAAACCTTGT+TGG | - | chr7_1:77869516-77869535 | None:intergenic | 35.0% | |
| !! | AACGCGTTTACGTTTTTCAA+CGG | - | chr7_1:77869699-77869718 | None:intergenic | 35.0% |
| !!! | GTTTTGAAACCCAGAAAACT+GGG | + | chr7_1:77869744-77869763 | Msa1040510:intron | 35.0% |
| TGTTTCGCTTTCCATTAATC+CGG | + | chr7_1:77869795-77869814 | Msa1040510:intron | 35.0% | |
| GGAGTTGAGTACTATGAATA+TGG | - | chr7_1:77870038-77870057 | None:intergenic | 35.0% | |
| TAAATAAGTGACGTGAGAGA+GGG | - | chr7_1:77870059-77870078 | None:intergenic | 35.0% | |
| ATAAATAAGTGACGTGAGAG+AGG | - | chr7_1:77870060-77870079 | None:intergenic | 35.0% | |
| TGTAGAACTGATATATCTGG+GGG | + | chr7_1:77870556-77870575 | Msa1040510:intron | 35.0% | |
| ! | AGGTGGTTAAGACAACTTTT+TGG | - | chr7_1:77870773-77870792 | None:intergenic | 35.0% |
| AAAAAGTTGTCTTAACCACC+TGG | + | chr7_1:77870772-77870791 | Msa1040510:CDS | 35.0% | |
| GTTGGTTAAACTAGAAGCTA+TGG | - | chr7_1:77871076-77871095 | None:intergenic | 35.0% | |
| !! | TAGCTTCTAGTTTAACCAAC+TGG | + | chr7_1:77871076-77871095 | Msa1040510:intron | 35.0% |
| TATATACCACAAACACCAGT+TGG | - | chr7_1:77871094-77871113 | None:intergenic | 35.0% | |
| CAATTATTCCAAGATCCATG+AGG | - | chr7_1:77871179-77871198 | None:intergenic | 35.0% | |
| ! | ACTTTGGAGGATCTGAATTT+GGG | - | chr7_1:77871231-77871250 | None:intergenic | 35.0% |
| ! | TACTTTGGAGGATCTGAATT+TGG | - | chr7_1:77871232-77871251 | None:intergenic | 35.0% |
| GAGTGTCAAAATTACTTTGG+AGG | - | chr7_1:77871244-77871263 | None:intergenic | 35.0% | |
| ! | TTTTCAACGACTTCTCAATC+CGG | + | chr7_1:77871385-77871404 | Msa1040510:CDS | 35.0% |
| !! | TTGTTTTGCTCATTGCCAAT+CGG | + | chr7_1:77871423-77871442 | Msa1040510:CDS | 35.0% |
| TCATGCATACCATGTTGTTA+AGG | - | chr7_1:77871486-77871505 | None:intergenic | 35.0% | |
| ! | CCAATTTTCCGAAATAGAAG+AGG | - | chr7_1:77871575-77871594 | None:intergenic | 35.0% |
| CCTCTTCTATTTCGGAAAAT+TGG | + | chr7_1:77871572-77871591 | Msa1040510:intron | 35.0% | |
| GGAAATACTGAGAGAGATAA+TGG | + | chr7_1:77871593-77871612 | Msa1040510:intron | 35.0% | |
| AGAACAATAAAGAAAGGGAG+AGG | - | chr7_1:77871708-77871727 | None:intergenic | 35.0% | |
| TAAGGCCATTACAACTCTTT+GGG | + | chr7_1:77871986-77872005 | Msa1040510:intron | 35.0% | |
| ATAGACCCAAAGAGTTGTAA+TGG | - | chr7_1:77871994-77872013 | None:intergenic | 35.0% | |
| AAGGGATCATGATACAATAG+GGG | - | chr7_1:77872565-77872584 | None:intergenic | 35.0% | |
| AGTTAAAGAGGTCATGTGTT+TGG | + | chr7_1:77872692-77872711 | Msa1040510:intron | 35.0% | |
| ! | TCATGTGTTTGGTTTCATGT+TGG | + | chr7_1:77872703-77872722 | Msa1040510:intron | 35.0% |
| GGTTTCATGTTGGATTGTAT+TGG | + | chr7_1:77872713-77872732 | Msa1040510:intron | 35.0% | |
| ! | AAATCAATTACTGATGGACG+TGG | - | chr7_1:77872768-77872787 | None:intergenic | 35.0% |
| ACGTCCATCAGTAATTGATT+TGG | + | chr7_1:77872767-77872786 | Msa1040510:intron | 35.0% | |
| CACACCAAATCAATTACTGA+TGG | - | chr7_1:77872774-77872793 | None:intergenic | 35.0% | |
| !! | TCAGTAATTGATTTGGTGTG+TGG | + | chr7_1:77872774-77872793 | Msa1040510:intron | 35.0% |
| GTGTTTGGTATCATGTTGAA+TGG | + | chr7_1:77872884-77872903 | Msa1040510:intron | 35.0% | |
| GTATCATGTTGAATGGCATT+GGG | + | chr7_1:77872891-77872910 | Msa1040510:intron | 35.0% | |
| ! | ATTTTCGTGCTTTACAGTGT+TGG | + | chr7_1:77873174-77873193 | Msa1040510:intron | 35.0% |
| TAAGGTAAATGTCAACCTTG+TGG | - | chr7_1:77873226-77873245 | None:intergenic | 35.0% | |
| TAAAAATGGAAGGAAGGGTA+AGG | - | chr7_1:77873244-77873263 | None:intergenic | 35.0% | |
| GGGAAATAAAAATGGAAGGA+AGG | - | chr7_1:77873250-77873269 | None:intergenic | 35.0% | |
| GCGAAGATGGGAAATAAAAA+TGG | - | chr7_1:77873258-77873277 | None:intergenic | 35.0% | |
| TAGGAATATCATCACTGCAA+AGG | - | chr7_1:77873315-77873334 | None:intergenic | 35.0% | |
| GCTTGAAGTTACAAGATTCA+AGG | + | chr7_1:77873498-77873517 | Msa1040510:three_prime_UTR | 35.0% | |
| AGAATATTTCCATTCCAACC+TGG | - | chr7_1:77873569-77873588 | None:intergenic | 35.0% | |
| GGAAATATTCTCTATGCTAC+AGG | + | chr7_1:77873578-77873597 | Msa1040510:three_prime_UTR | 35.0% | |
| GATATAATGAGGCCATTAGA+TGG | + | chr7_1:77873647-77873666 | Msa1040510:three_prime_UTR | 35.0% | |
| ! | CCAATTTGTTCTCCATCTAA+TGG | - | chr7_1:77873662-77873681 | None:intergenic | 35.0% |
| CCATTAGATGGAGAACAAAT+TGG | + | chr7_1:77873659-77873678 | Msa1040510:three_prime_UTR | 35.0% | |
| GAGTATAGGCATTATCATGT+TGG | - | chr7_1:77873753-77873772 | None:intergenic | 35.0% | |
| AAAGATCCAGTACCACACAT+TGG | + | chr7_1:77867870-77867889 | Msa1040510:five_prime_UTR | 40.0% | |
| ! | ATCCATGGAGCTGATTCTAA+AGG | + | chr7_1:77868121-77868140 | Msa1040510:CDS | 40.0% |
| TATCCATCCTATCCTACTCA+GGG | - | chr7_1:77868243-77868262 | None:intergenic | 40.0% | |
| ATATCCATCCTATCCTACTC+AGG | - | chr7_1:77868244-77868263 | None:intergenic | 40.0% | |
| TGTCTTCACTATTCATGGTG+TGG | + | chr7_1:77868302-77868321 | Msa1040510:intron | 40.0% | |
| TGTTTGGATGGAACTTTACC+TGG | + | chr7_1:77868402-77868421 | Msa1040510:CDS | 40.0% | |
| ! | TAGTTGGCTCATTCAATTGG+AGG | + | chr7_1:77868461-77868480 | Msa1040510:CDS | 40.0% |
| ATCATGGATCTCGGTAACAA+TGG | + | chr7_1:77868501-77868520 | Msa1040510:intron | 40.0% | |
| ! | AAAACTTTTCTTCAGGGAGG+AGG | + | chr7_1:77868598-77868617 | Msa1040510:intron | 40.0% |
| ATATGGGTGGAAGGGTAAAA+GGG | - | chr7_1:77868753-77868772 | None:intergenic | 40.0% | |
| GATTTCAGTACACATATGGG+TGG | - | chr7_1:77868766-77868785 | None:intergenic | 40.0% | |
| !! | TCAAAGTGAGGTACTGTGAT+GGG | + | chr7_1:77868855-77868874 | Msa1040510:CDS | 40.0% |
| ! | TTTTTCTTGTGGCAGGAAGA+AGG | + | chr7_1:77869249-77869268 | Msa1040510:intron | 40.0% |
| ! | TGAATGGGCTCTTCTTAAGA+AGG | + | chr7_1:77869358-77869377 | Msa1040510:intron | 40.0% |
| TGTGAATTCATACCCCTTTC+AGG | + | chr7_1:77869412-77869431 | Msa1040510:intron | 40.0% | |
| ! | GCCAACAAGGTTTTCCATAT+TGG | + | chr7_1:77869512-77869531 | Msa1040510:intron | 40.0% |
| !! | AAGTCGTTGGAATCGCTTTT+TGG | + | chr7_1:77869655-77869674 | Msa1040510:intron | 40.0% |
| ATCGTACGTTTCAGACGATT+CGG | + | chr7_1:77869722-77869741 | Msa1040510:intron | 40.0% | |
| !!! | GGTTTTGAAACCCAGAAAAC+TGG | + | chr7_1:77869743-77869762 | Msa1040510:intron | 40.0% |
| TGGAAAGCGAAACAGAAAGT+GGG | - | chr7_1:77869789-77869808 | None:intergenic | 40.0% | |
| ATGGAAAGCGAAACAGAAAG+TGG | - | chr7_1:77869790-77869809 | None:intergenic | 40.0% | |
| CTTTCCATTAATCCGGATTC+CGG | + | chr7_1:77869802-77869821 | Msa1040510:intron | 40.0% | |
| TTTCCATTAATCCGGATTCC+GGG | + | chr7_1:77869803-77869822 | Msa1040510:intron | 40.0% | |
| ! | AAATGCGTTTAGGGTGAATC+CGG | - | chr7_1:77869842-77869861 | None:intergenic | 40.0% |
| TCGAGATCCTAAGTAAGATC+GGG | - | chr7_1:77870284-77870303 | None:intergenic | 40.0% | |
| CTCGAGATCCTAAGTAAGAT+CGG | - | chr7_1:77870285-77870304 | None:intergenic | 40.0% | |
| ! | TCTTTTATCTGGATGCTCTG+CGG | + | chr7_1:77870349-77870368 | Msa1040510:intron | 40.0% |
| GTGAAATGTTTGAGTGATGC+TGG | + | chr7_1:77870434-77870453 | Msa1040510:intron | 40.0% | |
| AAGTTTACAGGCAATGATGC+AGG | - | chr7_1:77870509-77870528 | None:intergenic | 40.0% | |
| TGCATCATTGCCTGTAAACT+TGG | + | chr7_1:77870508-77870527 | Msa1040510:intron | 40.0% | |
| GTAGAACTGATATATCTGGG+GGG | + | chr7_1:77870557-77870576 | Msa1040510:intron | 40.0% | |
| CACACATTGAGGAATCTCTT+TGG | + | chr7_1:77870580-77870599 | Msa1040510:intron | 40.0% | |
| ACATTGAGGAATCTCTTTGG+AGG | + | chr7_1:77870583-77870602 | Msa1040510:intron | 40.0% | |
| GCAATGAAATCTTCTGTCAG+TGG | + | chr7_1:77870665-77870684 | Msa1040510:intron | 40.0% | |
| TGAATGCAGCTTATGATGCA+TGG | + | chr7_1:77870946-77870965 | Msa1040510:CDS | 40.0% | |
| GTTTAACCAACTGGTGTTTG+TGG | + | chr7_1:77871085-77871104 | Msa1040510:intron | 40.0% | |
| ATGTATCTTGTCTCTCCGAT+TGG | - | chr7_1:77871441-77871460 | None:intergenic | 40.0% | |
| AATCGGAGAGACAAGATACA+TGG | + | chr7_1:77871440-77871459 | Msa1040510:CDS | 40.0% | |
| CATACCATGTTGTTAAGGAG+GGG | - | chr7_1:77871481-77871500 | None:intergenic | 40.0% | |
| GCATACCATGTTGTTAAGGA+GGG | - | chr7_1:77871482-77871501 | None:intergenic | 40.0% | |
| TGCATACCATGTTGTTAAGG+AGG | - | chr7_1:77871483-77871502 | None:intergenic | 40.0% | |
| GAGAGCTTTCATCATAGCAA+AGG | - | chr7_1:77871648-77871667 | None:intergenic | 40.0% | |
| TTTCCAACGGCAATTGCAAT+TGG | - | chr7_1:77871774-77871793 | None:intergenic | 40.0% | |
| TTGCAATTGCCGTTGGAAAT+TGG | + | chr7_1:77871775-77871794 | Msa1040510:CDS | 40.0% | |
| ! | TTATGGCAGGTATTGTCACA+GGG | - | chr7_1:77871843-77871862 | None:intergenic | 40.0% |
| ! | ATTATGGCAGGTATTGTCAC+AGG | - | chr7_1:77871844-77871863 | None:intergenic | 40.0% |
| TGACAATACCTGCCATAATC+TGG | + | chr7_1:77871845-77871864 | Msa1040510:CDS | 40.0% | |
| CTCACTTGAAGACCAGATTA+TGG | - | chr7_1:77871860-77871879 | None:intergenic | 40.0% | |
| CTAAGGCCATTACAACTCTT+TGG | + | chr7_1:77871985-77872004 | Msa1040510:intron | 40.0% | |
| ATTGGTAGAACTCCGTGAAA+GGG | + | chr7_1:77872337-77872356 | Msa1040510:intron | 40.0% | |
| !!! | ACTCCGTGAAAGGGTATTTT+TGG | + | chr7_1:77872346-77872365 | Msa1040510:intron | 40.0% |
| AGGTTGAAGTTGAACTACTG+TGG | + | chr7_1:77872487-77872506 | Msa1040510:intron | 40.0% | |
| AGGGATCATGATACAATAGG+GGG | - | chr7_1:77872564-77872583 | None:intergenic | 40.0% | |
| !! | AAGGAAAGCAATGGACTACT+CGG | - | chr7_1:77872625-77872644 | None:intergenic | 40.0% |
| GAAACAGCGGATAGTTAAAG+AGG | + | chr7_1:77872680-77872699 | Msa1040510:intron | 40.0% | |
| GTTGAGTGACTTGAATGGAT+AGG | + | chr7_1:77872804-77872823 | Msa1040510:intron | 40.0% | |
| CACTGGATAGTTAAGAGAGT+TGG | + | chr7_1:77872860-77872879 | Msa1040510:intron | 40.0% | |
| !! | GTTAAGAGAGTTGGTGTGTT+TGG | + | chr7_1:77872869-77872888 | Msa1040510:intron | 40.0% |
| GGTATCATGTTGAATGGCAT+TGG | + | chr7_1:77872890-77872909 | Msa1040510:intron | 40.0% | |
| ! | ATGTTGAATGGCATTGGGTT+TGG | + | chr7_1:77872896-77872915 | Msa1040510:intron | 40.0% |
| !! | GGTTTGGTGTCTGGATAATT+TGG | + | chr7_1:77872912-77872931 | Msa1040510:intron | 40.0% |
| ! | TTGGTGTCTGGATAATTTGG+TGG | + | chr7_1:77872915-77872934 | Msa1040510:intron | 40.0% |
| TGGTGTCTGGATAATTTGGT+GGG | + | chr7_1:77872916-77872935 | Msa1040510:intron | 40.0% | |
| AGTTTCACGTAAAGTAGACG+AGG | - | chr7_1:77873057-77873076 | None:intergenic | 40.0% | |
| CGTCTACTTTACGTGAAACT+TGG | + | chr7_1:77873057-77873076 | Msa1040510:intron | 40.0% | |
| AAATGAGACGATGTAGGCAT+TGG | - | chr7_1:77873090-77873109 | None:intergenic | 40.0% | |
| CATCATGGAATTGCGAAGAT+GGG | - | chr7_1:77873270-77873289 | None:intergenic | 40.0% | |
| GAATATCATCACTGCAAAGG+AGG | - | chr7_1:77873312-77873331 | None:intergenic | 40.0% | |
| TAAAAGTCAACCTTGTGGAG+CGG | - | chr7_1:77873354-77873373 | None:intergenic | 40.0% | |
| AGCACTAAAAGTCAACCTTG+TGG | - | chr7_1:77873359-77873378 | None:intergenic | 40.0% | |
| !! | ACAAGGTTGACTTTTAGTGC+TGG | + | chr7_1:77873358-77873377 | Msa1040510:CDS | 40.0% |
| GCAATGATGCTATGTACAAG+TGG | + | chr7_1:77873683-77873702 | Msa1040510:three_prime_UTR | 40.0% | |
| ATGCTATGTACAAGTGGTGT+TGG | + | chr7_1:77873689-77873708 | Msa1040510:three_prime_UTR | 40.0% | |
| ! | ATGTACAAGTGGTGTTGGAT+TGG | + | chr7_1:77873694-77873713 | Msa1040510:three_prime_UTR | 40.0% |
| GATCTCGTGAGATCTAACTG+AGG | - | chr7_1:77867978-77867997 | None:intergenic | 45.0% | |
| AGACACAGAATCTCTCACCT+CGG | + | chr7_1:77868002-77868021 | Msa1040510:CDS | 45.0% | |
| ! | TCGTTTTCCAAGATATCCCG+AGG | - | chr7_1:77868022-77868041 | None:intergenic | 45.0% |
| ! | CGATGTCGTTTCAGTTCCAT+TGG | + | chr7_1:77868039-77868058 | Msa1040510:CDS | 45.0% |
| AGTGGGATCATAAGAGGTTG+AGG | - | chr7_1:77868094-77868113 | None:intergenic | 45.0% | |
| AGAGTGAGTGGGATCATAAG+AGG | - | chr7_1:77868100-77868119 | None:intergenic | 45.0% | |
| ATCCCACTCACTCTTATCCA+TGG | + | chr7_1:77868106-77868125 | Msa1040510:CDS | 45.0% | |
| CTCCATGGATAAGAGTGAGT+GGG | - | chr7_1:77868111-77868130 | None:intergenic | 45.0% | |
| !! | CTCCTTTAGAATCAGCTCCA+TGG | - | chr7_1:77868126-77868145 | None:intergenic | 45.0% |
| TGTGTTTCGATTCCCTGAGT+AGG | + | chr7_1:77868228-77868247 | Msa1040510:intron | 45.0% | |
| TTCGATTCCCTGAGTAGGAT+AGG | + | chr7_1:77868233-77868252 | Msa1040510:intron | 45.0% | |
| ATTCCCTGAGTAGGATAGGA+TGG | + | chr7_1:77868237-77868256 | Msa1040510:intron | 45.0% | |
| ATTTGCACCAGATCCAGATC+CGG | - | chr7_1:77868442-77868461 | None:intergenic | 45.0% | |
| CTGGATCTGGTGCAAATAGT+TGG | + | chr7_1:77868445-77868464 | Msa1040510:CDS | 45.0% | |
| ACGCGGTTCCTCAAAATACA+TGG | + | chr7_1:77868666-77868685 | Msa1040510:CDS | 45.0% | |
| AGGGTAAAAGGGAAACAACC+AGG | - | chr7_1:77868742-77868761 | None:intergenic | 45.0% | |
| CATATGGGTGGAAGGGTAAA+AGG | - | chr7_1:77868754-77868773 | None:intergenic | 45.0% | |
| CAGTACACATATGGGTGGAA+GGG | - | chr7_1:77868761-77868780 | None:intergenic | 45.0% | |
| TCAGTACACATATGGGTGGA+AGG | - | chr7_1:77868762-77868781 | None:intergenic | 45.0% | |
| ACTGGAACAGAGTCAAAGTG+AGG | + | chr7_1:77868843-77868862 | Msa1040510:CDS | 45.0% | |
| !! | GTCAAAGTGAGGTACTGTGA+TGG | + | chr7_1:77868854-77868873 | Msa1040510:CDS | 45.0% |
| !! | CAAAGTGAGGTACTGTGATG+GGG | + | chr7_1:77868856-77868875 | Msa1040510:CDS | 45.0% |
| ACGAGGTCAGTGAGATAGTA+TGG | + | chr7_1:77868903-77868922 | Msa1040510:intron | 45.0% | |
| GCTGCACAGCTTCAATTTAG+AGG | + | chr7_1:77869434-77869453 | Msa1040510:CDS | 45.0% | |
| GATGTCCATGGATGCTAACA+AGG | + | chr7_1:77869562-77869581 | Msa1040510:intron | 45.0% | |
| GTCTACCTTGTTAGCATCCA+TGG | - | chr7_1:77869570-77869589 | None:intergenic | 45.0% | |
| AAGCGATTCCAACGACTTTC+CGG | - | chr7_1:77869653-77869672 | None:intergenic | 45.0% | |
| !!! | TCGTTGGAATCGCTTTTTGG+TGG | + | chr7_1:77869658-77869677 | Msa1040510:intron | 45.0% |
| ! | AATGCGTTTAGGGTGAATCC+GGG | - | chr7_1:77869841-77869860 | None:intergenic | 45.0% |
| GATCCTAAGTAAGATCGGGT+AGG | - | chr7_1:77870280-77870299 | None:intergenic | 45.0% | |
| GATCTCGAGTTTGTCTACCT+TGG | + | chr7_1:77870296-77870315 | Msa1040510:intron | 45.0% | |
| ! | CTTTTATCTGGATGCTCTGC+GGG | + | chr7_1:77870350-77870369 | Msa1040510:intron | 45.0% |
| ! | TGGAGGTGTAGTTAGCTTAC+AGG | + | chr7_1:77870600-77870619 | Msa1040510:intron | 45.0% |
| AAATTACCGAAGTTGGGTCC+AGG | - | chr7_1:77870793-77870812 | None:intergenic | 45.0% | |
| ! | TTTGTGTCCTCGAAGTGCTA+TGG | + | chr7_1:77871042-77871061 | Msa1040510:intron | 45.0% |
| ATCCATACCATAGCACTTCG+AGG | - | chr7_1:77871052-77871071 | None:intergenic | 45.0% | |
| ! | TATGGCAGGTATTGTCACAG+GGG | - | chr7_1:77871842-77871861 | None:intergenic | 45.0% |
| CTTGAAGACCAGATTATGGC+AGG | - | chr7_1:77871856-77871875 | None:intergenic | 45.0% | |
| CATTGGTAGAACTCCGTGAA+AGG | + | chr7_1:77872336-77872355 | Msa1040510:intron | 45.0% | |
| GAAAACACACGTACTCTCTC+CGG | - | chr7_1:77872461-77872480 | None:intergenic | 45.0% | |
| !! | GGAGAGAGTACGTGTGTTTT+CGG | + | chr7_1:77872460-77872479 | Msa1040510:intron | 45.0% |
| !! | GAGAGAGTACGTGTGTTTTC+GGG | + | chr7_1:77872461-77872480 | Msa1040510:intron | 45.0% |
| GAACTTCTGGCCCGAATATT+GGG | - | chr7_1:77872603-77872622 | None:intergenic | 45.0% | |
| !! | AATGGACTACTCGGAACTTC+TGG | - | chr7_1:77872616-77872635 | None:intergenic | 45.0% |
| ! | GGTGTTGGAAAGGAAAGCAA+TGG | - | chr7_1:77872634-77872653 | None:intergenic | 45.0% |
| TTTCCTTTCCAACACCACGT+AGG | + | chr7_1:77872638-77872657 | Msa1040510:intron | 45.0% | |
| ACGTGGATGGATGTATTCAG+AGG | - | chr7_1:77872751-77872770 | None:intergenic | 45.0% | |
| ! | CAATTACTGATGGACGTGGA+TGG | - | chr7_1:77872764-77872783 | None:intergenic | 45.0% |
| !! | CAGTGTTGGTAAATCTGCCA+TGG | + | chr7_1:77873188-77873207 | Msa1040510:intron | 45.0% |
| ! | TGTGGATTGAGAGTCTACCA+TGG | - | chr7_1:77873208-77873227 | None:intergenic | 45.0% |
| TGGTAGACTCTCAATCCACA+AGG | + | chr7_1:77873208-77873227 | Msa1040510:CDS | 45.0% | |
| CCATCATGGAATTGCGAAGA+TGG | - | chr7_1:77873271-77873290 | None:intergenic | 45.0% | |
| CCATCTTCGCAATTCCATGA+TGG | + | chr7_1:77873268-77873287 | Msa1040510:intron | 45.0% | |
| AAAAGTCAACCTTGTGGAGC+GGG | - | chr7_1:77873353-77873372 | None:intergenic | 45.0% | |
| ! | GACACTAGTGAAAGTATGCC+AGG | + | chr7_1:77873548-77873567 | Msa1040510:three_prime_UTR | 45.0% |
| ! | CTAGTGAAAGTATGCCAGGT+TGG | + | chr7_1:77873552-77873571 | Msa1040510:three_prime_UTR | 45.0% |
| ! | GAAAGTATGCCAGGTTGGAA+TGG | + | chr7_1:77873557-77873576 | Msa1040510:three_prime_UTR | 45.0% |
| ATTCTGATGCTGTAGCCTGT+AGG | + | chr7_1:77873601-77873620 | Msa1040510:three_prime_UTR | 45.0% | |
| TAGCCTGTAGGTGGTTGATT+GGG | + | chr7_1:77873613-77873632 | Msa1040510:three_prime_UTR | 45.0% | |
| ATTCCCAATCAACCACCTAC+AGG | - | chr7_1:77873619-77873638 | None:intergenic | 45.0% | |
| CACTCTCCAATGTGTGGTAC+TGG | - | chr7_1:77867879-77867898 | None:intergenic | 50.0% | |
| TGCACTCACTCTCCAATGTG+TGG | - | chr7_1:77867885-77867904 | None:intergenic | 50.0% | |
| GACACAGAATCTCTCACCTC+GGG | + | chr7_1:77868003-77868022 | Msa1040510:CDS | 50.0% | |
| TCTCTCACCTCGGGATATCT+TGG | + | chr7_1:77868012-77868031 | Msa1040510:CDS | 50.0% | |
| GATGAACGCATAGCTGCCAA+TGG | - | chr7_1:77868058-77868077 | None:intergenic | 50.0% | |
| ATAAGAGGTTGAGGCAGCAG+GGG | - | chr7_1:77868085-77868104 | None:intergenic | 50.0% | |
| CATAAGAGGTTGAGGCAGCA+GGG | - | chr7_1:77868086-77868105 | None:intergenic | 50.0% | |
| TCATAAGAGGTTGAGGCAGC+AGG | - | chr7_1:77868087-77868106 | None:intergenic | 50.0% | |
| GCTCCATGGATAAGAGTGAG+TGG | - | chr7_1:77868112-77868131 | None:intergenic | 50.0% | |
| ! | GGAGCTGATTCTAAAGGAGC+AGG | + | chr7_1:77868127-77868146 | Msa1040510:CDS | 50.0% |
| TTTGCACCAGATCCAGATCC+GGG | - | chr7_1:77868441-77868460 | None:intergenic | 50.0% | |
| ! | CTTTTCTTCAGGGAGGAGGA+TGG | + | chr7_1:77868602-77868621 | Msa1040510:intron | 50.0% |
| CAGTGGAGACAGTCAAAACG+AGG | + | chr7_1:77868886-77868905 | Msa1040510:CDS | 50.0% | |
| GGTGGGGAGAGGTAAAACTA+TGG | + | chr7_1:77869107-77869126 | Msa1040510:intron | 50.0% | |
| TGAAGCTGTGCAGCCTGAAA+GGG | - | chr7_1:77869428-77869447 | None:intergenic | 50.0% | |
| TTGAAGCTGTGCAGCCTGAA+AGG | - | chr7_1:77869429-77869448 | None:intergenic | 50.0% | |
| GGGAATGAAGAACGCCAACA+AGG | + | chr7_1:77869499-77869518 | Msa1040510:CDS | 50.0% | |
| AAACTCGCGATCCAACTCGT+AGG | + | chr7_1:77869590-77869609 | Msa1040510:intron | 50.0% | |
| GGGATGTGAGATCGCAAACT+CGG | - | chr7_1:77869621-77869640 | None:intergenic | 50.0% | |
| ATTCCAACGACTTTCCGGCA+CGG | - | chr7_1:77869648-77869667 | None:intergenic | 50.0% | |
| !!! | GAATCGCTTTTTGGTGGTCG+CGG | + | chr7_1:77869664-77869683 | Msa1040510:intron | 50.0% |
| AACCCAGAAAACTGGGTTCG+CGG | + | chr7_1:77869751-77869770 | Msa1040510:intron | 50.0% | |
| ACCCATGAGATCGTGAATCG+GGG | - | chr7_1:77870257-77870276 | None:intergenic | 50.0% | |
| GACCCATGAGATCGTGAATC+GGG | - | chr7_1:77870258-77870277 | None:intergenic | 50.0% | |
| GGACCCATGAGATCGTGAAT+CGG | - | chr7_1:77870259-77870278 | None:intergenic | 50.0% | |
| GGTCCTACCCGATCTTACTT+AGG | + | chr7_1:77870274-77870293 | Msa1040510:intron | 50.0% | |
| TAACCACCTGGACCCAACTT+CGG | + | chr7_1:77870784-77870803 | Msa1040510:CDS | 50.0% | |
| GCTGCATTCAGCAGAAACAG+TGG | - | chr7_1:77870936-77870955 | None:intergenic | 50.0% | |
| TGCAGCTTATGATGCATGGC+AGG | + | chr7_1:77870950-77870969 | Msa1040510:CDS | 50.0% | |
| ! | GTCCTCGAAGTGCTATGGTA+TGG | + | chr7_1:77871047-77871066 | Msa1040510:intron | 50.0% |
| AATGCGGGGCTAGACTTTCT+TGG | - | chr7_1:77871148-77871167 | None:intergenic | 50.0% | |
| ATGAGGATCTGCTGAATGCG+GGG | - | chr7_1:77871162-77871181 | None:intergenic | 50.0% | |
| CATGAGGATCTGCTGAATGC+GGG | - | chr7_1:77871163-77871182 | None:intergenic | 50.0% | |
| CCATGAGGATCTGCTGAATG+CGG | - | chr7_1:77871164-77871183 | None:intergenic | 50.0% | |
| CAGCAGATCCTCATGGATCT+TGG | + | chr7_1:77871168-77871187 | Msa1040510:CDS | 50.0% | |
| CTCTCCCCTCCTTAACAACA+TGG | + | chr7_1:77871474-77871493 | Msa1040510:CDS | 50.0% | |
| CAGCCAATTGCAATTGCCGT+TGG | + | chr7_1:77871768-77871787 | Msa1040510:intron | 50.0% | |
| AGGCATAGAATGGGGTCCTT+GGG | - | chr7_1:77872126-77872145 | None:intergenic | 50.0% | |
| GACCCCATTCTATGCCTGAA+GGG | + | chr7_1:77872129-77872148 | Msa1040510:intron | 50.0% | |
| CACCCTTCAGGCATAGAATG+GGG | - | chr7_1:77872134-77872153 | None:intergenic | 50.0% | |
| CCACCCTTCAGGCATAGAAT+GGG | - | chr7_1:77872135-77872154 | None:intergenic | 50.0% | |
| ACCACCCTTCAGGCATAGAA+TGG | - | chr7_1:77872136-77872155 | None:intergenic | 50.0% | |
| !! | AAAAGAAGGCACCACCCTTC+AGG | - | chr7_1:77872146-77872165 | None:intergenic | 50.0% |
| !! | GTACGTGTGTTTTCGGGCTT+AGG | + | chr7_1:77872467-77872486 | Msa1040510:intron | 50.0% |
| GGAACTTCTGGCCCGAATAT+TGG | - | chr7_1:77872604-77872623 | None:intergenic | 50.0% | |
| ! | TCACCTACGTGGTGTTGGAA+AGG | - | chr7_1:77872644-77872663 | None:intergenic | 50.0% |
| CCAACACCACGTAGGTGATT+CGG | + | chr7_1:77872646-77872665 | Msa1040510:intron | 50.0% | |
| TTCTGTCCGAATCACCTACG+TGG | - | chr7_1:77872655-77872674 | None:intergenic | 50.0% | |
| ! | AGGTGATTCGGACAGAACTC+AGG | + | chr7_1:77872658-77872677 | Msa1040510:intron | 50.0% |
| GGACAGAACTCAGGAAACAG+CGG | + | chr7_1:77872667-77872686 | Msa1040510:intron | 50.0% | |
| !! | ATGGCATTGGGTTTGGTGTC+TGG | + | chr7_1:77872903-77872922 | Msa1040510:intron | 50.0% |
| CGGGAATATAGCATGGAGGT+AGG | - | chr7_1:77873334-77873353 | None:intergenic | 50.0% | |
| TGTGGAGCGGGAATATAGCA+TGG | - | chr7_1:77873341-77873360 | None:intergenic | 50.0% | |
| TGCTATATTCCCGCTCCACA+AGG | + | chr7_1:77873341-77873360 | Msa1040510:CDS | 50.0% | |
| GTAGCCTGTAGGTGGTTGAT+TGG | + | chr7_1:77873612-77873631 | Msa1040510:three_prime_UTR | 50.0% | |
| CCTGGTTACCACTTCCATCC+CGG | + | chr7_1:77868420-77868439 | Msa1040510:CDS | 55.0% | |
| TACCACTTCCATCCCGGATC+TGG | + | chr7_1:77868426-77868445 | Msa1040510:CDS | 55.0% | |
| ATCCAGATCCGGGATGGAAG+TGG | - | chr7_1:77868431-77868450 | None:intergenic | 55.0% | |
| TTCCATCCCGGATCTGGATC+TGG | + | chr7_1:77868432-77868451 | Msa1040510:CDS | 55.0% | |
| ! | TGTGATGGGGCGTCTTTCAG+TGG | + | chr7_1:77868869-77868888 | Msa1040510:CDS | 55.0% |
| TATTACCTCACGCAGCCTGC+TGG | + | chr7_1:77869084-77869103 | Msa1040510:intron | 55.0% | |
| ATTACCTCACGCAGCCTGCT+GGG | + | chr7_1:77869085-77869104 | Msa1040510:intron | 55.0% | |
| GAAGCTGTGCAGCCTGAAAG+GGG | - | chr7_1:77869427-77869446 | None:intergenic | 55.0% | |
| ACTCGGACGATCCTACGAGT+TGG | - | chr7_1:77869604-77869623 | None:intergenic | 55.0% | |
| !! | GCTTTTTGGTGGTCGCGGTT+TGG | + | chr7_1:77869669-77869688 | Msa1040510:intron | 55.0% |
| ACCCAGAAAACTGGGTTCGC+GGG | + | chr7_1:77869752-77869771 | Msa1040510:intron | 55.0% | |
| ! | ACCCGCGAACCCAGTTTTCT+GGG | - | chr7_1:77869756-77869775 | None:intergenic | 55.0% |
| CATTAATCCGGATTCCGGGC+CGG | + | chr7_1:77869807-77869826 | Msa1040510:intron | 55.0% | |
| ATTAATCCGGATTCCGGGCC+GGG | + | chr7_1:77869808-77869827 | Msa1040510:intron | 55.0% | |
| TCCCCCGATTCACGATCTCA+TGG | + | chr7_1:77870252-77870271 | Msa1040510:intron | 55.0% | |
| CCCATGAGATCGTGAATCGG+GGG | - | chr7_1:77870256-77870275 | None:intergenic | 55.0% | |
| CCCCCGATTCACGATCTCAT+GGG | + | chr7_1:77870253-77870272 | Msa1040510:intron | 55.0% | |
| TTATCTGGATGCTCTGCGGG+TGG | + | chr7_1:77870353-77870372 | Msa1040510:intron | 55.0% | |
| CAGGCAATGATGCAGGCTAG+AGG | - | chr7_1:77870502-77870521 | None:intergenic | 55.0% | |
| ! | TATCTGGGGGGCACACATTG+AGG | + | chr7_1:77870569-77870588 | Msa1040510:intron | 55.0% |
| TTACCGAAGTTGGGTCCAGG+TGG | - | chr7_1:77870790-77870809 | None:intergenic | 55.0% | |
| CCGCATTCAGCAGATCCTCA+TGG | + | chr7_1:77871161-77871180 | Msa1040510:CDS | 55.0% | |
| CAGGCATAGAATGGGGTCCT+TGG | - | chr7_1:77872127-77872146 | None:intergenic | 55.0% | |
| GGACCCCATTCTATGCCTGA+AGG | + | chr7_1:77872128-77872147 | Msa1040510:intron | 55.0% | |
| CCCATTCTATGCCTGAAGGG+TGG | + | chr7_1:77872132-77872151 | Msa1040510:intron | 55.0% | |
| CCGAATCACCTACGTGGTGT+TGG | - | chr7_1:77872649-77872668 | None:intergenic | 55.0% | |
| GGAGCGGGAATATAGCATGG+AGG | - | chr7_1:77873338-77873357 | None:intergenic | 55.0% | |
| CTGATGCTGTAGCCTGTAGG+TGG | + | chr7_1:77873604-77873623 | Msa1040510:three_prime_UTR | 55.0% | |
| CCGGGATGGAAGTGGTAACC+AGG | - | chr7_1:77868423-77868442 | None:intergenic | 60.0% | |
| CACCAGATCCAGATCCGGGA+TGG | - | chr7_1:77868437-77868456 | None:intergenic | 60.0% | |
| TTACCTCACGCAGCCTGCTG+GGG | + | chr7_1:77869086-77869105 | Msa1040510:intron | 60.0% | |
| ! | GACCCGCGAACCCAGTTTTC+TGG | - | chr7_1:77869757-77869776 | None:intergenic | 60.0% |
| CGGCCCGGAATCCGGATTAA+TGG | - | chr7_1:77869809-77869828 | None:intergenic | 60.0% | |
| GTGAATCCGGGTCATGAGCC+CGG | - | chr7_1:77869829-77869848 | None:intergenic | 60.0% | |
| AGGTTGAGGCAGCAGGGGAG+AGG | - | chr7_1:77868080-77868099 | None:intergenic | 65.0% | |
| TTACCTCTCCCCACCCCAGC+AGG | - | chr7_1:77869102-77869121 | None:intergenic | 65.0% | |
| ACGACTTTCCGGCACGGCGA+GGG | - | chr7_1:77869642-77869661 | None:intergenic | 65.0% | |
| AACGACTTTCCGGCACGGCG+AGG | - | chr7_1:77869643-77869662 | None:intergenic | 65.0% | |
| TCGCCGTGCCGGAAAGTCGT+TGG | + | chr7_1:77869642-77869661 | Msa1040510:intron | 65.0% | |
| TGGATGCTCTGCGGGTGGTC+TGG | + | chr7_1:77870358-77870377 | Msa1040510:intron | 65.0% | |
| CTCACGCAGCCTGCTGGGGT+GGG | + | chr7_1:77869090-77869109 | Msa1040510:intron | 70.0% | |
| TCACGCAGCCTGCTGGGGTG+GGG | + | chr7_1:77869091-77869110 | Msa1040510:intron | 70.0% | |
| CTCACATCCCCTCGCCGTGC+CGG | + | chr7_1:77869631-77869650 | Msa1040510:intron | 70.0% | |
| CGACTTTCCGGCACGGCGAG+GGG | - | chr7_1:77869641-77869660 | None:intergenic | 70.0% | |
| CATGAGCCCGGCCCGGAATC+CGG | - | chr7_1:77869817-77869836 | None:intergenic | 70.0% | |
| CCACCCCAGCAGGCTGCGTG+AGG | - | chr7_1:77869092-77869111 | None:intergenic | 75.0% | |
| CCTCACGCAGCCTGCTGGGG+TGG | + | chr7_1:77869089-77869108 | Msa1040510:intron | 75.0% | |
| CAGCCTGCTGGGGTGGGGAG+AGG | + | chr7_1:77869096-77869115 | Msa1040510:intron | 75.0% | |
| TCCGGGCCGGGCTCATGACC+CGG | + | chr7_1:77869820-77869839 | Msa1040510:intron | 75.0% | |
| TCCGGGTCATGAGCCCGGCC+CGG | - | chr7_1:77869824-77869843 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 77867844 | 77873945 | 77867844 | ID=Msa1040510;Name=Msa1040510 |
| chr7_1 | mRNA | 77867844 | 77873945 | 77867844 | ID=Msa1040510-mRNA-1;Parent=Msa1040510;Name=Msa1040510-mRNA-1;_AED=0.21;_eAED=0.21;_QI=79|0.90|1|1|0.81|0.91|12|522|409 |
| chr7_1 | exon | 77867844 | 77868148 | 77867844 | ID=Msa1040510-mRNA-1:exon:20622;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77868400 | 77868482 | 77868400 | ID=Msa1040510-mRNA-1:exon:20623;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77868613 | 77868742 | 77868613 | ID=Msa1040510-mRNA-1:exon:20624;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77868834 | 77868907 | 77868834 | ID=Msa1040510-mRNA-1:exon:20625;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77869434 | 77869520 | 77869434 | ID=Msa1040510-mRNA-1:exon:20626;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77870752 | 77870805 | 77870752 | ID=Msa1040510-mRNA-1:exon:20627;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77870894 | 77870971 | 77870894 | ID=Msa1040510-mRNA-1:exon:20628;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77871143 | 77871248 | 77871143 | ID=Msa1040510-mRNA-1:exon:20629;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77871350 | 77871495 | 77871350 | ID=Msa1040510-mRNA-1:exon:20630;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77871771 | 77871874 | 77871771 | ID=Msa1040510-mRNA-1:exon:20631;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77873191 | 77873229 | 77873191 | ID=Msa1040510-mRNA-1:exon:20632;Parent=Msa1040510-mRNA-1 |
| chr7_1 | exon | 77873321 | 77873945 | 77873321 | ID=Msa1040510-mRNA-1:exon:20633;Parent=Msa1040510-mRNA-1 |
| chr7_1 | five_prime_UTR | 77867844 | 77867922 | 77867844 | ID=Msa1040510-mRNA-1:five_prime_utr;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77867923 | 77868148 | 77867923 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77868400 | 77868482 | 77868400 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77868613 | 77868742 | 77868613 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77868834 | 77868907 | 77868834 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77869434 | 77869520 | 77869434 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77870752 | 77870805 | 77870752 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77870894 | 77870971 | 77870894 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77871143 | 77871248 | 77871143 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77871350 | 77871495 | 77871350 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77871771 | 77871874 | 77871771 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77873191 | 77873229 | 77873191 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | CDS | 77873321 | 77873423 | 77873321 | ID=Msa1040510-mRNA-1:cds;Parent=Msa1040510-mRNA-1 |
| chr7_1 | three_prime_UTR | 77873424 | 77873945 | 77873424 | ID=Msa1040510-mRNA-1:three_prime_utr;Parent=Msa1040510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
