Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296050 | PNX94886.1 | 90.214 | 327 | 32 | 0 | 1 | 327 | 1 | 327 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296050 | sp|F4ICF4|RBL10_ARATH | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 1.80e-117 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296050 | A0A2K3MVU0 | 90.214 | 327 | 32 | 0 | 1 | 327 | 1 | 327 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003630 | Msa0296050 | -0.805846 | 1.096105e-49 | -8.615850e-47 |
| Msa0010490 | Msa0296050 | -0.832853 | 7.456206e-56 | -8.615850e-47 |
| Msa0010500 | Msa0296050 | -0.800902 | 1.159250e-48 | -8.615850e-47 |
| Msa0023480 | Msa0296050 | -0.804174 | 2.452211e-49 | -8.615850e-47 |
| Msa0030300 | Msa0296050 | -0.801884 | 7.294825e-49 | -8.615850e-47 |
| Msa0036540 | Msa0296050 | -0.830410 | 2.982803e-55 | -8.615850e-47 |
| Msa0037770 | Msa0296050 | -0.811892 | 5.576729e-51 | -8.615850e-47 |
| Msa0043850 | Msa0296050 | -0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa0046110 | Msa0296050 | 0.850917 | 1.245321e-60 | -8.615850e-47 |
| Msa0054920 | Msa0296050 | -0.815158 | 1.066684e-51 | -8.615850e-47 |
| Msa0058310 | Msa0296050 | -0.801114 | 1.049096e-48 | -8.615850e-47 |
| Msa0059040 | Msa0296050 | -0.800867 | 1.178077e-48 | -8.615850e-47 |
| Msa0059110 | Msa0296050 | -0.801712 | 7.910057e-49 | -8.615850e-47 |
| Msa0071250 | Msa0296050 | -0.871120 | 8.705930e-67 | -8.615850e-47 |
| Msa0077900 | Msa0296050 | -0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa0090510 | Msa0296050 | -0.842569 | 2.386761e-58 | -8.615850e-47 |
| Msa0090520 | Msa0296050 | -0.801358 | 9.349286e-49 | -8.615850e-47 |
| Msa0090550 | Msa0296050 | -0.826684 | 2.370508e-54 | -8.615850e-47 |
| Msa0092410 | Msa0296050 | -0.824554 | 7.580295e-54 | -8.615850e-47 |
| Msa0096700 | Msa0296050 | -0.812362 | 4.403990e-51 | -8.615850e-47 |
| Msa0100290 | Msa0296050 | -0.824636 | 7.249995e-54 | -8.615850e-47 |
| Msa0106710 | Msa0296050 | -0.801760 | 7.733171e-49 | -8.615850e-47 |
| Msa0115130 | Msa0296050 | -0.806485 | 8.040964e-50 | -8.615850e-47 |
| Msa0115400 | Msa0296050 | -0.819799 | 9.604645e-53 | -8.615850e-47 |
| Msa0117520 | Msa0296050 | -0.815707 | 8.051980e-52 | -8.615850e-47 |
| Msa0127020 | Msa0296050 | -0.814347 | 1.613668e-51 | -8.615850e-47 |
| Msa0137990 | Msa0296050 | -0.803071 | 4.152298e-49 | -8.615850e-47 |
| Msa0138020 | Msa0296050 | -0.819100 | 1.386346e-52 | -8.615850e-47 |
| Msa0138640 | Msa0296050 | -0.806716 | 7.186955e-50 | -8.615850e-47 |
| Msa0139670 | Msa0296050 | -0.807342 | 5.296835e-50 | -8.615850e-47 |
| Msa0142500 | Msa0296050 | -0.806566 | 7.731653e-50 | -8.615850e-47 |
| Msa0144530 | Msa0296050 | -0.826136 | 3.201998e-54 | -8.615850e-47 |
| Msa0149440 | Msa0296050 | -0.829265 | 5.668761e-55 | -8.615850e-47 |
| Msa0160960 | Msa0296050 | -0.832221 | 1.069898e-55 | -8.615850e-47 |
| Msa0169280 | Msa0296050 | -0.813654 | 2.293999e-51 | -8.615850e-47 |
| Msa0179190 | Msa0296050 | -0.816156 | 6.394931e-52 | -8.615850e-47 |
| Msa0183910 | Msa0296050 | -0.831602 | 1.521194e-55 | -8.615850e-47 |
| Msa0187490 | Msa0296050 | -0.804209 | 2.411406e-49 | -8.615850e-47 |
| Msa0202410 | Msa0296050 | -0.837194 | 6.002657e-57 | -8.615850e-47 |
| Msa0207030 | Msa0296050 | -0.809707 | 1.656134e-50 | -8.615850e-47 |
| Msa0216850 | Msa0296050 | 0.856447 | 3.197423e-62 | -8.615850e-47 |
| Msa0220400 | Msa0296050 | 0.802312 | 5.955964e-49 | -8.615850e-47 |
| Msa0233370 | Msa0296050 | -0.852110 | 5.724916e-61 | -8.615850e-47 |
| Msa0234410 | Msa0296050 | 0.802236 | 6.173899e-49 | -8.615850e-47 |
| Msa0240900 | Msa0296050 | -0.804330 | 2.275585e-49 | -8.615850e-47 |
| Msa0241140 | Msa0296050 | -0.803857 | 2.853267e-49 | -8.615850e-47 |
| Msa0244970 | Msa0296050 | -0.821448 | 4.016035e-53 | -8.615850e-47 |
| Msa0244980 | Msa0296050 | -0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0245430 | Msa0296050 | -0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa0269560 | Msa0296050 | -0.819298 | 1.249835e-52 | -8.615850e-47 |
| Msa0278580 | Msa0296050 | -0.830837 | 2.344844e-55 | -8.615850e-47 |
| Msa0283420 | Msa0296050 | -0.803254 | 3.805842e-49 | -8.615850e-47 |
| Msa0285330 | Msa0296050 | -0.831918 | 1.271181e-55 | -8.615850e-47 |
| Msa0295460 | Msa0296050 | 0.835830 | 1.335449e-56 | -8.615850e-47 |
| Msa0296050 | Msa0308440 | -0.801284 | 9.681463e-49 | -8.615850e-47 |
| Msa0296050 | Msa0311720 | -0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0296050 | Msa0317960 | -0.834441 | 2.991433e-56 | -8.615850e-47 |
| Msa0296050 | Msa0317970 | -0.819846 | 9.371967e-53 | -8.615850e-47 |
| Msa0296050 | Msa0321690 | -0.841301 | 5.163544e-58 | -8.615850e-47 |
| Msa0296050 | Msa0322240 | -0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0296050 | Msa0333850 | 0.938431 | 6.801738e-99 | -8.615850e-47 |
| Msa0296050 | Msa0333970 | 0.988955 | 4.314278e-176 | -8.615850e-47 |
| Msa0296050 | Msa0357900 | -0.800518 | 1.387860e-48 | -8.615850e-47 |
| Msa0296050 | Msa0374340 | 0.823836 | 1.117693e-53 | -8.615850e-47 |
| Msa0296050 | Msa0378970 | -0.826228 | 3.044349e-54 | -8.615850e-47 |
| Msa0296050 | Msa0386940 | -0.809035 | 2.308788e-50 | -8.615850e-47 |
| Msa0296050 | Msa0388730 | -0.803154 | 3.990642e-49 | -8.615850e-47 |
| Msa0296050 | Msa0389210 | -0.803711 | 3.059708e-49 | -8.615850e-47 |
| Msa0296050 | Msa0403500 | -0.820312 | 7.329320e-53 | -8.615850e-47 |
| Msa0296050 | Msa0427580 | -0.859901 | 3.001919e-63 | -8.615850e-47 |
| Msa0296050 | Msa0428580 | -0.813629 | 2.323192e-51 | -8.615850e-47 |
| Msa0296050 | Msa0430060 | -0.842012 | 3.351774e-58 | -8.615850e-47 |
| Msa0296050 | Msa0430150 | -0.842711 | 2.187844e-58 | -8.615850e-47 |
| Msa0296050 | Msa0450400 | 0.809435 | 1.894648e-50 | -8.615850e-47 |
| Msa0296050 | Msa0474940 | -0.829791 | 4.224925e-55 | -8.615850e-47 |
| Msa0296050 | Msa0480780 | -0.802226 | 6.202716e-49 | -8.615850e-47 |
| Msa0296050 | Msa0481030 | -0.841283 | 5.218989e-58 | -8.615850e-47 |
| Msa0296050 | Msa0481280 | -0.848371 | 6.394480e-60 | -8.615850e-47 |
| Msa0296050 | Msa0482130 | -0.816514 | 5.316317e-52 | -8.615850e-47 |
| Msa0296050 | Msa0482940 | -0.819298 | 1.249835e-52 | -8.615850e-47 |
| Msa0296050 | Msa0500470 | -0.846086 | 2.709374e-59 | -8.615850e-47 |
| Msa0296050 | Msa0502090 | -0.810017 | 1.420470e-50 | -8.615850e-47 |
| Msa0296050 | Msa0518170 | -0.853301 | 2.615977e-61 | -8.615850e-47 |
| Msa0296050 | Msa0519160 | -0.814179 | 1.757451e-51 | -8.615850e-47 |
| Msa0296050 | Msa0523050 | -0.802356 | 5.832765e-49 | -8.615850e-47 |
| Msa0296050 | Msa0534870 | -0.812526 | 4.055183e-51 | -8.615850e-47 |
| Msa0296050 | Msa0539410 | -0.814016 | 1.909291e-51 | -8.615850e-47 |
| Msa0296050 | Msa0542090 | -0.811644 | 6.313816e-51 | -8.615850e-47 |
| Msa0296050 | Msa0542130 | -0.809978 | 1.448236e-50 | -8.615850e-47 |
| Msa0296050 | Msa0542490 | -0.801821 | 7.515313e-49 | -8.615850e-47 |
| Msa0296050 | Msa0544160 | -0.817474 | 3.235813e-52 | -8.615850e-47 |
| Msa0296050 | Msa0554290 | -0.824885 | 6.333193e-54 | -8.615850e-47 |
| Msa0296050 | Msa0560500 | -0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0296050 | Msa0562690 | -0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0296050 | Msa0566350 | -0.811355 | 7.298427e-51 | -8.615850e-47 |
| Msa0296050 | Msa0566750 | -0.808882 | 2.488852e-50 | -8.615850e-47 |
| Msa0296050 | Msa0569780 | -0.829661 | 4.544422e-55 | -8.615850e-47 |
| Msa0296050 | Msa0572550 | 0.815079 | 1.110902e-51 | -8.615850e-47 |
| Msa0296050 | Msa0576120 | 0.827117 | 1.867654e-54 | -8.615850e-47 |
| Msa0296050 | Msa0581280 | -0.847093 | 1.437845e-59 | -8.615850e-47 |
| Msa0296050 | Msa0583360 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0296050 | Msa0610180 | -0.805746 | 1.150481e-49 | -8.615850e-47 |
| Msa0296050 | Msa0618950 | -0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa0296050 | Msa0618970 | -0.835292 | 1.826746e-56 | -8.615850e-47 |
| Msa0296050 | Msa0627380 | -0.811972 | 5.358140e-51 | -8.615850e-47 |
| Msa0296050 | Msa0634890 | -0.801041 | 1.085583e-48 | -8.615850e-47 |
| Msa0296050 | Msa0648780 | -0.800481 | 1.412684e-48 | -8.615850e-47 |
| Msa0296050 | Msa0652690 | -0.800867 | 1.178077e-48 | -8.615850e-47 |
| Msa0296050 | Msa0657120 | -0.803501 | 3.382051e-49 | -8.615850e-47 |
| Msa0296050 | Msa0658590 | -0.818407 | 1.991737e-52 | -8.615850e-47 |
| Msa0296050 | Msa0665100 | -0.833849 | 4.210540e-56 | -8.615850e-47 |
| Msa0296050 | Msa0672550 | -0.834544 | 2.819189e-56 | -8.615850e-47 |
| Msa0296050 | Msa0685140 | -0.807885 | 4.061661e-50 | -8.615850e-47 |
| Msa0296050 | Msa0689440 | -0.821191 | 4.603302e-53 | -8.615850e-47 |
| Msa0296050 | Msa0691290 | -0.825562 | 4.381914e-54 | -8.615850e-47 |
| Msa0296050 | Msa0701100 | -0.822293 | 2.560403e-53 | -8.615850e-47 |
| Msa0296050 | Msa0702370 | -0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0296050 | Msa0705390 | -0.835438 | 1.677903e-56 | -8.615850e-47 |
| Msa0296050 | Msa0705990 | -0.852104 | 5.745888e-61 | -8.615850e-47 |
| Msa0296050 | Msa0709120 | -0.809175 | 2.154957e-50 | -8.615850e-47 |
| Msa0296050 | Msa0711780 | -0.804362 | 2.240119e-49 | -8.615850e-47 |
| Msa0296050 | Msa0719610 | -0.808759 | 2.644272e-50 | -8.615850e-47 |
| Msa0296050 | Msa0724170 | -0.805882 | 1.076833e-49 | -8.615850e-47 |
| Msa0296050 | Msa0724370 | -0.809134 | 2.198432e-50 | -8.615850e-47 |
| Msa0296050 | Msa0738440 | -0.804227 | 2.389668e-49 | -8.615850e-47 |
| Msa0296050 | Msa0741440 | -0.813458 | 2.533723e-51 | -8.615850e-47 |
| Msa0296050 | Msa0745250 | 0.816517 | 5.308538e-52 | -8.615850e-47 |
| Msa0296050 | Msa0750810 | -0.804317 | 2.289373e-49 | -8.615850e-47 |
| Msa0296050 | Msa0763330 | -0.825238 | 5.227376e-54 | -8.615850e-47 |
| Msa0296050 | Msa0764920 | -0.822009 | 2.979699e-53 | -8.615850e-47 |
| Msa0296050 | Msa0771950 | -0.813326 | 2.708273e-51 | -8.615850e-47 |
| Msa0296050 | Msa0800370 | -0.811723 | 6.071661e-51 | -8.615850e-47 |
| Msa0296050 | Msa0822500 | -0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0296050 | Msa0823540 | -0.810073 | 1.381397e-50 | -8.615850e-47 |
| Msa0296050 | Msa0826150 | -0.814736 | 1.323267e-51 | -8.615850e-47 |
| Msa0296050 | Msa0830040 | -0.800838 | 1.194206e-48 | -8.615850e-47 |
| Msa0296050 | Msa0830540 | -0.817637 | 2.974172e-52 | -8.615850e-47 |
| Msa0296050 | Msa0844110 | -0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0296050 | Msa0844610 | -0.821528 | 3.849585e-53 | -8.615850e-47 |
| Msa0296050 | Msa0863720 | -0.820271 | 7.489407e-53 | -8.615850e-47 |
| Msa0296050 | Msa0865030 | -0.813178 | 2.918590e-51 | -8.615850e-47 |
| Msa0296050 | Msa0867070 | 0.815791 | 7.715450e-52 | -8.615850e-47 |
| Msa0296050 | Msa0880730 | -0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0296050 | Msa0880810 | -0.818258 | 2.153476e-52 | -8.615850e-47 |
| Msa0296050 | Msa0902830 | -0.821352 | 4.225619e-53 | -8.615850e-47 |
| Msa0296050 | Msa0945240 | -0.804489 | 2.107836e-49 | -8.615850e-47 |
| Msa0296050 | Msa0945440 | -0.808399 | 3.157263e-50 | -8.615850e-47 |
| Msa0296050 | Msa0954840 | -0.811107 | 8.259486e-51 | -8.615850e-47 |
| Msa0296050 | Msa0970530 | -0.816768 | 4.664475e-52 | -8.615850e-47 |
| Msa0296050 | Msa0970600 | -0.829783 | 4.242863e-55 | -8.615850e-47 |
| Msa0296050 | Msa0980540 | -0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0296050 | Msa1024680 | -0.816966 | 4.209691e-52 | -8.615850e-47 |
| Msa0296050 | Msa1034590 | -0.806267 | 8.939546e-50 | -8.615850e-47 |
| Msa0296050 | Msa1040510 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
| Msa0296050 | Msa1059470 | -0.800411 | 1.459342e-48 | -8.615850e-47 |
| Msa0296050 | Msa1062040 | -0.811020 | 8.624364e-51 | -8.615850e-47 |
| Msa0296050 | Msa1063420 | -0.815274 | 1.005303e-51 | -8.615850e-47 |
| Msa0296050 | Msa1080490 | -0.829058 | 6.365334e-55 | -8.615850e-47 |
| Msa0296050 | Msa1089320 | -0.826083 | 3.295679e-54 | -8.615850e-47 |
| Msa0296050 | Msa1089450 | -0.817857 | 2.652364e-52 | -8.615850e-47 |
| Msa0296050 | Msa1089460 | -0.821585 | 3.734380e-53 | -8.615850e-47 |
| Msa0296050 | Msa1096070 | -0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0296050 | Msa1107200 | -0.819184 | 1.327248e-52 | -8.615850e-47 |
| Msa0296050 | Msa1108710 | -0.818250 | 2.161803e-52 | -8.615850e-47 |
| Msa0296050 | Msa1123710 | 0.814802 | 1.279781e-51 | -8.615850e-47 |
| Msa0296050 | Msa1128270 | -0.828376 | 9.303524e-55 | -8.615850e-47 |
| Msa0296050 | Msa1128280 | -0.815369 | 9.578815e-52 | -8.615850e-47 |
| Msa0296050 | Msa1132480 | -0.807547 | 4.791482e-50 | -8.615850e-47 |
| Msa0296050 | Msa1144040 | -0.847733 | 9.594120e-60 | -8.615850e-47 |
| Msa0296050 | Msa1150780 | -0.810186 | 1.306602e-50 | -8.615850e-47 |
| Msa0296050 | Msa1155170 | 0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0296050 | Msa1158390 | -0.819334 | 1.226378e-52 | -8.615850e-47 |
| Msa0296050 | Msa1160590 | -0.806362 | 8.534865e-50 | -8.615850e-47 |
| Msa0296050 | Msa1165270 | -0.817521 | 3.158527e-52 | -8.615850e-47 |
| Msa0296050 | Msa1169850 | 0.818779 | 1.640114e-52 | -8.615850e-47 |
| Msa0296050 | Msa1169910 | -0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0296050 | Msa1181250 | -0.817519 | 3.162310e-52 | -8.615850e-47 |
| Msa0296050 | Msa1181330 | -0.817336 | 3.475787e-52 | -8.615850e-47 |
| Msa0296050 | Msa1183140 | -0.844887 | 5.722431e-59 | -8.615850e-47 |
| Msa0296050 | Msa1196610 | 0.815075 | 1.113050e-51 | -8.615850e-47 |
| Msa0296050 | Msa1206400 | 0.805381 | 1.372011e-49 | -8.615850e-47 |
| Msa0296050 | Msa1206450 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
| Msa0296050 | Msa1207310 | -0.815423 | 9.316782e-52 | -8.615850e-47 |
| Msa0296050 | Msa1209200 | -0.839156 | 1.874785e-57 | -8.615850e-47 |
| Msa0296050 | Msa1214170 | -0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa0296050 | Msa1218500 | -0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0296050 | Msa1218580 | -0.819765 | 9.779199e-53 | -8.615850e-47 |
| Msa0296050 | Msa1225860 | 0.822577 | 2.199550e-53 | -8.615850e-47 |
| Msa0296050 | Msa1226470 | -0.831435 | 1.671931e-55 | -8.615850e-47 |
| Msa0296050 | Msa1229480 | -0.831872 | 1.304509e-55 | -8.615850e-47 |
| Msa0296050 | Msa1236110 | 0.862066 | 6.594510e-64 | -8.615850e-47 |
| Msa0296050 | Msa1236160 | 0.820443 | 6.840930e-53 | -8.615850e-47 |
| Msa0296050 | Msa1250110 | -0.814344 | 1.616438e-51 | -8.615850e-47 |
| Msa0296050 | Msa1250730 | -0.807911 | 4.011359e-50 | -8.615850e-47 |
| Msa0296050 | Msa1266070 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0296050 | Msa1270660 | -0.810154 | 1.327461e-50 | -8.615850e-47 |
| Msa0296050 | Msa1272010 | -0.835378 | 1.737115e-56 | -8.615850e-47 |
| Msa0296050 | Msa1303070 | -0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0296050 | Msa1307160 | -0.800686 | 1.282893e-48 | -8.615850e-47 |
| Msa0296050 | Msa1307180 | -0.864135 | 1.511873e-64 | -8.615850e-47 |
| Msa0296050 | Msa1309760 | -0.825110 | 5.604586e-54 | -8.615850e-47 |
| Msa0296050 | Msa1316360 | -0.867780 | 1.063495e-65 | -8.615850e-47 |
| Msa0296050 | Msa1325410 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
| Msa0296050 | Msa1332050 | -0.805675 | 1.190554e-49 | -8.615850e-47 |
| Msa0296050 | Msa1332590 | -0.805231 | 1.474851e-49 | -8.615850e-47 |
| Msa0296050 | Msa1336560 | -0.810212 | 1.289334e-50 | -8.615850e-47 |
| Msa0296050 | Msa1346840 | -0.824272 | 8.831792e-54 | -8.615850e-47 |
| Msa0296050 | Msa1359400 | -0.847392 | 1.190441e-59 | -8.615850e-47 |
| Msa0296050 | Msa1364210 | -0.826905 | 2.098461e-54 | -8.615850e-47 |
| Msa0296050 | Msa1368360 | -0.829832 | 4.127377e-55 | -8.615850e-47 |
| Msa0296050 | Msa1369920 | 0.832665 | 8.304912e-56 | -8.615850e-47 |
| Msa0296050 | Msa1370450 | -0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0296050 | Msa1370590 | -0.812602 | 3.904345e-51 | -8.615850e-47 |
| Msa0296050 | Msa1377790 | -0.809731 | 1.636632e-50 | -8.615850e-47 |
| Msa0296050 | Msa1382020 | -0.827215 | 1.769429e-54 | -8.615850e-47 |
| Msa0296050 | Msa1383960 | -0.802244 | 6.151102e-49 | -8.615850e-47 |
| Msa0296050 | Msa1384100 | -0.817665 | 2.931687e-52 | -8.615850e-47 |
| Msa0296050 | Msa1385720 | -0.803100 | 4.094927e-49 | -8.615850e-47 |
| Msa0296050 | Msa1393840 | 0.845987 | 2.881298e-59 | -8.615850e-47 |
| Msa0296050 | Msa1395730 | -0.831225 | 1.883054e-55 | -8.615850e-47 |
| Msa0296050 | Msa1407190 | -0.834341 | 3.170526e-56 | -8.615850e-47 |
| Msa0296050 | Msa1407760 | -0.806363 | 8.529311e-50 | -8.615850e-47 |
| Msa0296050 | Msa1411520 | 0.815437 | 9.250896e-52 | -8.615850e-47 |
| Msa0296050 | Msa1412130 | -0.800284 | 1.549202e-48 | -8.615850e-47 |
| Msa0296050 | Msa1413380 | -0.809275 | 2.050412e-50 | -8.615850e-47 |
| Msa0296050 | Msa1419870 | -0.818236 | 2.177641e-52 | -8.615850e-47 |
| Msa0296050 | Msa1423540 | -0.838431 | 2.888423e-57 | -8.615850e-47 |
| Msa0296050 | Msa1428780 | -0.816805 | 4.575206e-52 | -8.615850e-47 |
| Msa0296050 | Msa1430130 | -0.806278 | 8.890372e-50 | -8.615850e-47 |
| Msa0296050 | Msa1430550 | -0.801219 | 9.984916e-49 | -8.615850e-47 |
| Msa0296050 | Msa1432130 | -0.828568 | 8.364288e-55 | -8.615850e-47 |
| Msa0296050 | Msa1434090 | -0.815925 | 7.199499e-52 | -8.615850e-47 |
| Msa0296050 | Msa1436600 | -0.815097 | 1.100789e-51 | -8.615850e-47 |
| Msa0296050 | Msa1437330 | -0.801858 | 7.382243e-49 | -8.615850e-47 |
| Msa0296050 | Msa1437730 | -0.823284 | 1.504558e-53 | -8.615850e-47 |
| Msa0296050 | Msa1442790 | -0.809211 | 2.116464e-50 | -8.615850e-47 |
| Msa0296050 | Msa1444120 | -0.816826 | 4.526953e-52 | -8.615850e-47 |
| Msa0296050 | Msa1458810 | -0.814988 | 1.163594e-51 | -8.615850e-47 |
| Msa0296050 | Msa1460750 | -0.804552 | 2.045247e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296050 | MtrunA17_Chr2g0318441 | 95.719 | 327 | 14 | 0 | 1 | 327 | 1 | 327 | 0.0 | 596 |
| Msa0296050 | MtrunA17_Chr6g0457251 | 31.928 | 166 | 110 | 2 | 144 | 306 | 206 | 371 | 6.72e-20 | 89.7 |
| Msa0296050 | MtrunA17_Chr6g0472501 | 31.677 | 161 | 104 | 3 | 133 | 292 | 94 | 249 | 5.59e-13 | 68.6 |
| Msa0296050 | MtrunA17_Chr2g0332941 | 29.452 | 146 | 96 | 3 | 151 | 290 | 103 | 247 | 2.69e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296050 | AT1G25290.2 | 58.528 | 299 | 116 | 2 | 23 | 313 | 25 | 323 | 8.96e-122 | 353 |
| Msa0296050 | AT1G25290.1 | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 1.83e-118 | 345 |
| Msa0296050 | AT5G38510.2 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0296050 | AT5G38510.3 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0296050 | AT5G38510.1 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0296050 | AT1G77860.1 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.59e-15 | 76.3 |
| Msa0296050 | AT1G77860.2 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.97e-15 | 76.3 |
| Msa0296050 | AT1G63120.1 | 30.380 | 158 | 106 | 3 | 151 | 305 | 104 | 260 | 4.01e-13 | 69.3 |
| Msa0296050 | AT5G07250.1 | 32.168 | 143 | 95 | 2 | 149 | 290 | 126 | 267 | 1.99e-12 | 67.8 |
| Msa0296050 | AT2G29050.1 | 30.719 | 153 | 102 | 3 | 147 | 296 | 119 | 270 | 2.75e-12 | 67.4 |
| Msa0296050 | AT1G52580.1 | 31.034 | 145 | 90 | 3 | 145 | 283 | 94 | 234 | 5.27e-12 | 66.2 |
| Msa0296050 | AT1G12750.4 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0296050 | AT1G12750.7 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0296050 | AT1G12750.6 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0296050 | AT1G12750.3 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0296050 | AT1G12750.1 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
Find 114 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCACATTATAGTTCATTT+TGG | 0.165320 | 2_3:-48894188 | None:intergenic |
| GTCCACTTCCTTCCATTAAA+TGG | 0.175610 | 2_3:-48891145 | None:intergenic |
| ACATAAGTTAAAGGGGTTTC+AGG | 0.225941 | 2_3:-48894070 | None:intergenic |
| GTATTTCTCATGCAGCTTAT+TGG | 0.251876 | 2_3:+48892788 | Msa0296050:intron |
| TATTTCTCATGCAGCTTATT+GGG | 0.272605 | 2_3:+48892789 | Msa0296050:intron |
| AGTGGGACCAACTGAATTTA+AGG | 0.276075 | 2_3:-48891888 | None:intergenic |
| AAGTATGCAACATAAGTTAA+AGG | 0.285351 | 2_3:-48894079 | None:intergenic |
| ATTGCTGCATCATGGCTTAT+TGG | 0.290926 | 2_3:+48893799 | Msa0296050:CDS |
| GAAACATTTCATCGGCCTAT+TGG | 0.295999 | 2_3:+48893933 | Msa0296050:exon |
| TGTTTAGATTGAAGGATAAA+TGG | 0.318157 | 2_3:+48890969 | Msa0296050:CDS |
| CATCAACTGGCATTGACAAC+TGG | 0.321814 | 2_3:+48892816 | Msa0296050:CDS |
| ACCATTCAAATATTCTCTTA+AGG | 0.329000 | 2_3:-48894036 | None:intergenic |
| TGCTCCCGTGTTTAGATTGA+AGG | 0.329417 | 2_3:+48890961 | Msa0296050:CDS |
| GCATTTCCAGAGCTGGCTTC+AGG | 0.332234 | 2_3:-48891097 | None:intergenic |
| GGGAGACACGGTGGCTGAAA+TGG | 0.347067 | 2_3:-48890091 | None:intergenic |
| CAGGTGCAGCTATGAGTTAT+TGG | 0.355414 | 2_3:+48892053 | Msa0296050:intron |
| AGTATGCAACATAAGTTAAA+GGG | 0.361682 | 2_3:-48894078 | None:intergenic |
| TTTCTCCAGATTCATTGTTT+CGG | 0.366404 | 2_3:-48894310 | None:intergenic |
| CCCACTGTGGAGAGCTTTAG+TGG | 0.376144 | 2_3:+48891905 | Msa0296050:CDS |
| AATTCAATCCTTTGAGTTGA+AGG | 0.377772 | 2_3:-48891003 | None:intergenic |
| CCATTCAAATATTCTCTTAA+GGG | 0.378361 | 2_3:-48894035 | None:intergenic |
| ACAAGTAATTGCCCTCAATA+TGG | 0.389857 | 2_3:+48892424 | Msa0296050:CDS |
| AACATCCGAAACAATGAATC+TGG | 0.390173 | 2_3:+48894305 | Msa0296050:three_prime_UTR |
| CATGAATCCACATCTTTAGA+TGG | 0.393473 | 2_3:+48893835 | Msa0296050:CDS |
| TGCAAATATTGGACACCTAA+TGG | 0.395874 | 2_3:+48891769 | Msa0296050:CDS |
| AGATTCATTGTTTCGGATGT+TGG | 0.399746 | 2_3:-48894303 | None:intergenic |
| TCTACTTCGTTCCTGTCTCC+AGG | 0.414096 | 2_3:+48890133 | Msa0296050:CDS |
| CCCACCTGGATGCACCGCTC+CGG | 0.417368 | 2_3:+48894259 | Msa0296050:three_prime_UTR |
| CTTATTGGGTTATCATCAAC+TGG | 0.417736 | 2_3:+48892803 | Msa0296050:CDS |
| TCTTAAGGGAAGCTTACAAC+AGG | 0.420919 | 2_3:-48894021 | None:intergenic |
| GAAATGGAGGGACGCGGCGG+TGG | 0.422096 | 2_3:-48890075 | None:intergenic |
| TTTCAGTTAGGAGGCTTGAT+TGG | 0.428722 | 2_3:+48893772 | Msa0296050:intron |
| ATCTTGAAGAGATTATATAT+TGG | 0.429421 | 2_3:-48893883 | None:intergenic |
| CTGTCACCGGTTTGCAAGGT+GGG | 0.434972 | 2_3:+48890029 | Msa0296050:CDS |
| TGTTTCTATTTCCATGGCTT+AGG | 0.437025 | 2_3:-48893916 | None:intergenic |
| CCCACGACAAAAGCTTGCCT+TGG | 0.437216 | 2_3:-48891592 | None:intergenic |
| CATAAGTTAAAGGGGTTTCA+GGG | 0.437219 | 2_3:-48894069 | None:intergenic |
| TGAGTCGGCATTTCCAGAGC+TGG | 0.439376 | 2_3:-48891104 | None:intergenic |
| CCACCCGGAGCGGTGCATCC+AGG | 0.442660 | 2_3:-48894263 | None:intergenic |
| TTGCAAACCGGTGACAGAAA+TGG | 0.444522 | 2_3:-48890023 | None:intergenic |
| GCTTGCGCTTGTAATCCAAT+AGG | 0.449056 | 2_3:-48893948 | None:intergenic |
| CCACCTGGATGCACCGCTCC+GGG | 0.451604 | 2_3:+48894260 | Msa0296050:three_prime_UTR |
| TTAAGGCACAAAGACCTTGT+AGG | 0.451701 | 2_3:+48892371 | Msa0296050:CDS |
| ATGCCTGCAGTAGGTGCGTC+AGG | 0.452126 | 2_3:+48892085 | Msa0296050:CDS |
| AACCGGTGACAGAAATGGCT+TGG | 0.460775 | 2_3:-48890018 | None:intergenic |
| CCCTTAAGAGAATATTTGAA+TGG | 0.461614 | 2_3:+48894035 | Msa0296050:three_prime_UTR |
| GGAAGACCTGAAGCCAGCTC+TGG | 0.461947 | 2_3:+48891091 | Msa0296050:CDS |
| GCGGTGCATCCAGGTGGGAT+TGG | 0.462658 | 2_3:-48894254 | None:intergenic |
| TATCTTCAATTGTCAAGTGA+TGG | 0.464338 | 2_3:+48891025 | Msa0296050:CDS |
| GCCCAAGCCATTTCTGTCAC+CGG | 0.466220 | 2_3:+48890016 | Msa0296050:CDS |
| ATGAAATGTTTCTATTTCCA+TGG | 0.474316 | 2_3:-48893922 | None:intergenic |
| CCACGACAAAAGCTTGCCTT+GGG | 0.477575 | 2_3:-48891591 | None:intergenic |
| GGTTTAGGTTGGATCGGTTG+CGG | 0.482114 | 2_3:+48892340 | Msa0296050:intron |
| ATCAACTGGCATTGACAACT+GGG | 0.484122 | 2_3:+48892817 | Msa0296050:CDS |
| ATCTTCAATTGTCAAGTGAT+GGG | 0.485198 | 2_3:+48891026 | Msa0296050:CDS |
| ACCGGTGACAGAAATGGCTT+GGG | 0.501021 | 2_3:-48890017 | None:intergenic |
| CAGTTAGGAGGCTTGATTGG+TGG | 0.501779 | 2_3:+48893775 | Msa0296050:intron |
| TGTTACTCCTTAAATTCAGT+TGG | 0.501810 | 2_3:+48891881 | Msa0296050:CDS |
| TAAGGACCCACCTTGCAAAC+CGG | 0.514465 | 2_3:-48890035 | None:intergenic |
| GTAGAAAGTGAAGGCGGAGA+CGG | 0.519386 | 2_3:-48890115 | None:intergenic |
| ATGAGACACTTACCATATTG+AGG | 0.528872 | 2_3:-48892436 | None:intergenic |
| ATCCATTTAATGGAAGGAAG+TGG | 0.533831 | 2_3:+48891143 | Msa0296050:CDS |
| GGCGGAGACGGTGGGAGACA+CGG | 0.537970 | 2_3:-48890103 | None:intergenic |
| TCATTGACAAAGGACAACTT+TGG | 0.538888 | 2_3:+48891720 | Msa0296050:CDS |
| ATTTCTGTCACCGGTTTGCA+AGG | 0.538917 | 2_3:+48890025 | Msa0296050:CDS |
| GTGGATTCATGCTTCCATGC+AGG | 0.542563 | 2_3:-48893823 | None:intergenic |
| GAAAGTGAAGGCGGAGACGG+TGG | 0.544225 | 2_3:-48890112 | None:intergenic |
| TTGGTGGAATTGCTGCATCA+TGG | 0.545395 | 2_3:+48893791 | Msa0296050:CDS |
| GCTCCTGACGCACCTACTGC+AGG | 0.547227 | 2_3:-48892088 | None:intergenic |
| TGTAATGGTTTAGGTTGGAT+CGG | 0.547688 | 2_3:+48892334 | Msa0296050:intron |
| GCAATGATATCAAGTGGGTA+AGG | 0.550443 | 2_3:-48890053 | None:intergenic |
| TAAATTGCAAGATATCTTCG+AGG | 0.552516 | 2_3:-48891929 | None:intergenic |
| CACAAAGACCTTGTAGGAGG+TGG | 0.557075 | 2_3:+48892377 | Msa0296050:CDS |
| TCTTCTTCCATCTAAAGATG+TGG | 0.558989 | 2_3:-48893842 | None:intergenic |
| TGAGACACTTACCATATTGA+GGG | 0.563701 | 2_3:-48892435 | None:intergenic |
| CCCGGAGCGGTGCATCCAGG+TGG | 0.563975 | 2_3:-48894260 | None:intergenic |
| TTAAGAGAATATTTGAATGG+TGG | 0.565446 | 2_3:+48894038 | Msa0296050:three_prime_UTR |
| CCTGGATGCACCGCTCCGGG+TGG | 0.566387 | 2_3:+48894263 | Msa0296050:three_prime_UTR |
| CAAAGATGCCTTCAACTCAA+AGG | 0.568006 | 2_3:+48890995 | Msa0296050:CDS |
| CTCACAAAACATTGGCAGCA+AGG | 0.571689 | 2_3:-48891177 | None:intergenic |
| AGACACGGTGGCTGAAATGG+AGG | 0.574356 | 2_3:-48890088 | None:intergenic |
| CTGGATGCACCGCTCCGGGT+GGG | 0.583511 | 2_3:+48894264 | Msa0296050:three_prime_UTR |
| TCTGTCACCGGTTTGCAAGG+TGG | 0.583568 | 2_3:+48890028 | Msa0296050:CDS |
| CCACTAAAGCTCTCCACAGT+GGG | 0.584557 | 2_3:-48891905 | None:intergenic |
| TGGAAATAGAAACATTTCAT+CGG | 0.586800 | 2_3:+48893925 | Msa0296050:exon |
| GTGGCTGAAATGGAGGGACG+CGG | 0.589774 | 2_3:-48890081 | None:intergenic |
| GCGGTTACTTGCAATTGAAG+AGG | 0.591639 | 2_3:-48891957 | None:intergenic |
| GTTGCGCAACTTGCAACCCA+AGG | 0.593062 | 2_3:+48891575 | Msa0296050:CDS |
| GACACGGTGGCTGAAATGGA+GGG | 0.603040 | 2_3:-48890087 | None:intergenic |
| TTATCCTTCAATCTAAACAC+GGG | 0.608819 | 2_3:-48890965 | None:intergenic |
| TGCTCATACTCACAAAACAT+TGG | 0.609078 | 2_3:-48891185 | None:intergenic |
| CATGGCTTATTGGACCTGCA+TGG | 0.609641 | 2_3:+48893809 | Msa0296050:CDS |
| GTATGCAACATAAGTTAAAG+GGG | 0.609786 | 2_3:-48894077 | None:intergenic |
| TTACGAGAGGACCTAAGCCA+TGG | 0.618911 | 2_3:+48893905 | Msa0296050:CDS |
| CCGGAGCGGTGCATCCAGGT+GGG | 0.620667 | 2_3:-48894259 | None:intergenic |
| GCGGTGGCAATGATATCAAG+TGG | 0.623394 | 2_3:-48890059 | None:intergenic |
| ACCCAAAATGAACTATAATG+TGG | 0.625351 | 2_3:+48894186 | Msa0296050:three_prime_UTR |
| AATGATGTTGAATTCCCACC+CGG | 0.626961 | 2_3:-48894278 | None:intergenic |
| AGGCACAAAGACCTTGTAGG+AGG | 0.629028 | 2_3:+48892374 | Msa0296050:CDS |
| GTAAACAGTCTCATTGACAA+AGG | 0.638755 | 2_3:+48891710 | Msa0296050:CDS |
| GCTGAAATGGAGGGACGCGG+CGG | 0.649712 | 2_3:-48890078 | None:intergenic |
| TTTATCCTTCAATCTAAACA+CGG | 0.650319 | 2_3:-48890966 | None:intergenic |
| CTTAAGGGAAGCTTACAACA+GGG | 0.652533 | 2_3:-48894020 | None:intergenic |
| AAAGTGAAGGCGGAGACGGT+GGG | 0.654962 | 2_3:-48890111 | None:intergenic |
| CGGTGGCAATGATATCAAGT+GGG | 0.662467 | 2_3:-48890058 | None:intergenic |
| AACGAAGTAGAAAGTGAAGG+CGG | 0.666662 | 2_3:-48890121 | None:intergenic |
| AGGAACGAAGTAGAAAGTGA+AGG | 0.668444 | 2_3:-48890124 | None:intergenic |
| TGTTGAATTCCCACCCGGAG+CGG | 0.669454 | 2_3:-48894273 | None:intergenic |
| AATCTCTTCAAGATTACGAG+AGG | 0.669871 | 2_3:+48893892 | Msa0296050:CDS |
| TTCTGCAAAATGCCTGCAGT+AGG | 0.702369 | 2_3:+48892076 | Msa0296050:CDS |
| AAATTCAGTTGGTCCCACTG+TGG | 0.708926 | 2_3:+48891892 | Msa0296050:CDS |
| GGAGACGGTGGGAGACACGG+TGG | 0.711069 | 2_3:-48890100 | None:intergenic |
| ACCACTAAAGCTCTCCACAG+TGG | 0.711367 | 2_3:-48891906 | None:intergenic |
| TCAACTGGCATTGACAACTG+GGG | 0.722807 | 2_3:+48892818 | Msa0296050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTTTAAAA+TGG | - | chr2_3:48892205-48892224 | None:intergenic | 0.0% |
| !!! | TATATTTTTTCTTCTTATTT+AGG | + | chr2_3:48892619-48892638 | Msa0296050:intron | 10.0% |
| !! | TAAGAAAATGAAAAATTTAA+GGG | - | chr2_3:48892887-48892906 | None:intergenic | 10.0% |
| !!! | TTAATGTTGATGATTAAAAT+GGG | + | chr2_3:48890328-48890347 | Msa0296050:intron | 15.0% |
| !!! | AAAGTAAAATTGTTTTTGTA+TGG | + | chr2_3:48890411-48890430 | Msa0296050:intron | 15.0% |
| !!! | AAGTAAAATTGTTTTTGTAT+GGG | + | chr2_3:48890412-48890431 | Msa0296050:intron | 15.0% |
| !!! | ATTATTGATTAACAAATCAA+AGG | - | chr2_3:48891356-48891375 | None:intergenic | 15.0% |
| !!! | ATTATGGAATTAGAATATTT+TGG | - | chr2_3:48892022-48892041 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAAATGGTTCA+GGG | - | chr2_3:48892198-48892217 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTAAAATGGTTC+AGG | - | chr2_3:48892199-48892218 | None:intergenic | 15.0% |
| !! | CTAAGAAAATGAAAAATTTA+AGG | - | chr2_3:48892888-48892907 | None:intergenic | 15.0% |
| !!! | TTTATTCACTTTTTAAAATG+TGG | + | chr2_3:48892967-48892986 | Msa0296050:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAT+TGG | - | chr2_3:48893186-48893205 | None:intergenic | 15.0% |
| !! | AAATTGCAAAAATTTAGACT+TGG | + | chr2_3:48890184-48890203 | Msa0296050:intron | 20.0% |
| !!! | TAGTTATATTTTCCTCATTT+AGG | + | chr2_3:48890232-48890251 | Msa0296050:intron | 20.0% |
| !!! | GTTAATGTTGATGATTAAAA+TGG | + | chr2_3:48890327-48890346 | Msa0296050:intron | 20.0% |
| !! | ATGATACAATCACTTAATTA+AGG | - | chr2_3:48890588-48890607 | None:intergenic | 20.0% |
| !!! | TTTTTATTAGTTCTCTATGA+TGG | - | chr2_3:48890697-48890716 | None:intergenic | 20.0% |
| !!! | AAATACTTGTTAGATTGTTT+GGG | - | chr2_3:48890815-48890834 | None:intergenic | 20.0% |
| !!! | TAAATACTTGTTAGATTGTT+TGG | - | chr2_3:48890816-48890835 | None:intergenic | 20.0% |
| !!! | TTTTAATACAAAACTAAACC+AGG | - | chr2_3:48891835-48891854 | None:intergenic | 20.0% |
| !! | TATTGTAGGAATAATATAAG+CGG | - | chr2_3:48891979-48891998 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAAATGGTTCAG+GGG | - | chr2_3:48892197-48892216 | None:intergenic | 20.0% |
| !! | TTATTTAGGAAATGTTTGTT+CGG | + | chr2_3:48892633-48892652 | Msa0296050:intron | 20.0% |
| !!! | AATAAATGAGGGTATAATAA+TGG | - | chr2_3:48893252-48893271 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr2_3:48893347-48893366 | None:intergenic | 20.0% |
| !! | CTGAAAAATGTATATGTTAA+TGG | - | chr2_3:48893758-48893777 | None:intergenic | 20.0% |
| !!! | AACATATACATTTTTCAGTT+AGG | + | chr2_3:48893760-48893779 | Msa0296050:intron | 20.0% |
| !! | ATCTTGAAGAGATTATATAT+TGG | - | chr2_3:48893886-48893905 | None:intergenic | 20.0% |
| !!! | AAGAAGCCAATTTTTTTTTG+CGG | + | chr2_3:48889966-48889985 | Msa0296050:five_prime_UTR | 25.0% |
| ! | TTCTTTCTATAACCTAAATG+AGG | - | chr2_3:48890247-48890266 | None:intergenic | 25.0% |
| ! | ATAGAAAGAAACCATTGAAA+TGG | + | chr2_3:48890257-48890276 | Msa0296050:intron | 25.0% |
| ! | ACTTAAATACTCCATTTCAA+TGG | - | chr2_3:48890271-48890290 | None:intergenic | 25.0% |
| !! | TTGATGATTAAAATGGGAAT+AGG | + | chr2_3:48890334-48890353 | Msa0296050:intron | 25.0% |
| ! | AATTAAGGATATGTTTGGAT+TGG | - | chr2_3:48890573-48890592 | None:intergenic | 25.0% |
| ! | CACTTAATTAAGGATATGTT+TGG | - | chr2_3:48890578-48890597 | None:intergenic | 25.0% |
| ! | TTTATCCTTCAATCTAAACA+CGG | - | chr2_3:48890969-48890988 | None:intergenic | 25.0% |
| ! | TGTTTAGATTGAAGGATAAA+TGG | + | chr2_3:48890969-48890988 | Msa0296050:CDS | 25.0% |
| !!! | GCTAGTTTCTCTTTTTTTAA+TGG | + | chr2_3:48891067-48891086 | Msa0296050:CDS | 25.0% |
| !!! | AGTTTCTCTTTTTTTAATGG+AGG | + | chr2_3:48891070-48891089 | Msa0296050:CDS | 25.0% |
| ! | TCCAGAAAAAATCCATTTAA+TGG | + | chr2_3:48891133-48891152 | Msa0296050:CDS | 25.0% |
| !!! | TCCATTAAATGGATTTTTTC+TGG | - | chr2_3:48891137-48891156 | None:intergenic | 25.0% |
| ! | GAAAAAATCCATTTAATGGA+AGG | + | chr2_3:48891137-48891156 | Msa0296050:CDS | 25.0% |
| ! | AAACTTAATACACCAATCAA+GGG | - | chr2_3:48891215-48891234 | None:intergenic | 25.0% |
| ! | TAAACTTAATACACCAATCA+AGG | - | chr2_3:48891216-48891235 | None:intergenic | 25.0% |
| ! | AGTGAAAAGAAAGAAAAACA+AGG | + | chr2_3:48891279-48891298 | Msa0296050:intron | 25.0% |
| ! | GTGAAAAGAAAGAAAAACAA+GGG | + | chr2_3:48891280-48891299 | Msa0296050:intron | 25.0% |
| ! | CAGAAAAATGAAGAGAAAAA+TGG | - | chr2_3:48891451-48891470 | None:intergenic | 25.0% |
| !! | GTATCTAAAATTGTGAAAAG+AGG | - | chr2_3:48891499-48891518 | None:intergenic | 25.0% |
| ! | TTAATTCAAATCCTACCATT+AGG | - | chr2_3:48891787-48891806 | None:intergenic | 25.0% |
| !!! | ATTAGAATATTTTGGAGGTA+AGG | - | chr2_3:48892014-48892033 | None:intergenic | 25.0% |
| !!! | ATGGAATTAGAATATTTTGG+AGG | - | chr2_3:48892019-48892038 | None:intergenic | 25.0% |
| !! | TCCATAATTTCTAGAAAATC+AGG | + | chr2_3:48892034-48892053 | Msa0296050:intron | 25.0% |
| !!! | ACCTGATTTTCTAGAAATTA+TGG | - | chr2_3:48892038-48892057 | None:intergenic | 25.0% |
| ! | GACTTGTATCAAGTAAAATA+AGG | - | chr2_3:48892175-48892194 | None:intergenic | 25.0% |
| !! | AGTTTTCTATCTTCTCTATA+TGG | - | chr2_3:48892270-48892289 | None:intergenic | 25.0% |
| ! | AAAACAGTGAAGAAAGATAA+AGG | - | chr2_3:48892304-48892323 | None:intergenic | 25.0% |
| ! | TAAGTTGTTTATCTTAGTTG+AGG | - | chr2_3:48893043-48893062 | None:intergenic | 25.0% |
| ! | GGATGAAATTCAATAAATGA+GGG | - | chr2_3:48893263-48893282 | None:intergenic | 25.0% |
| ! | TGGATGAAATTCAATAAATG+AGG | - | chr2_3:48893264-48893283 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr2_3:48893294-48893313 | Msa0296050:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr2_3:48893295-48893314 | Msa0296050:intron | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | - | chr2_3:48893395-48893414 | None:intergenic | 25.0% |
| ! | AAACGACTATTATTTAGAGA+CGG | + | chr2_3:48893396-48893415 | Msa0296050:intron | 25.0% |
| ! | TAAACACTTATGAAACTGTT+TGG | - | chr2_3:48893527-48893546 | None:intergenic | 25.0% |
| !!! | AAAATGGATAGTCTTATACA+CGG | - | chr2_3:48893644-48893663 | None:intergenic | 25.0% |
| !!! | ATCCATTTTGTTATGTATGT+AGG | + | chr2_3:48893655-48893674 | Msa0296050:intron | 25.0% |
| !!! | ATATACATTTTTCAGTTAGG+AGG | + | chr2_3:48893763-48893782 | Msa0296050:intron | 25.0% |
| !! | ATGAAATGTTTCTATTTCCA+TGG | - | chr2_3:48893925-48893944 | None:intergenic | 25.0% |
| ! | TGGAAATAGAAACATTTCAT+CGG | + | chr2_3:48893925-48893944 | Msa0296050:exon | 25.0% |
| ! | CCATTCAAATATTCTCTTAA+GGG | - | chr2_3:48894038-48894057 | None:intergenic | 25.0% |
| ! | ACCATTCAAATATTCTCTTA+AGG | - | chr2_3:48894039-48894058 | None:intergenic | 25.0% |
| ! | TTAAGAGAATATTTGAATGG+TGG | + | chr2_3:48894038-48894057 | Msa0296050:three_prime_UTR | 25.0% |
| ! | AGTATGCAACATAAGTTAAA+GGG | - | chr2_3:48894081-48894100 | None:intergenic | 25.0% |
| ! | AAGTATGCAACATAAGTTAA+AGG | - | chr2_3:48894082-48894101 | None:intergenic | 25.0% |
| TTATCTACTGACATAAGCAA+TGG | - | chr2_3:48890539-48890558 | None:intergenic | 30.0% | |
| CTAACAAGTATTTATGACAG+TGG | + | chr2_3:48890822-48890841 | Msa0296050:intron | 30.0% | |
| TTATCCTTCAATCTAAACAC+GGG | - | chr2_3:48890968-48890987 | None:intergenic | 30.0% | |
| !! | AATTCAATCCTTTGAGTTGA+AGG | - | chr2_3:48891006-48891025 | None:intergenic | 30.0% |
| TATCTTCAATTGTCAAGTGA+TGG | + | chr2_3:48891025-48891044 | Msa0296050:CDS | 30.0% | |
| ATCTTCAATTGTCAAGTGAT+GGG | + | chr2_3:48891026-48891045 | Msa0296050:CDS | 30.0% | |
| GTTTATGACTTCCTAGAATT+TGG | + | chr2_3:48891231-48891250 | Msa0296050:intron | 30.0% | |
| CAGTACAAACTATTCAAATC+CGG | - | chr2_3:48891428-48891447 | None:intergenic | 30.0% | |
| ! | TCACAATTTTAGATACCTCT+TGG | + | chr2_3:48891503-48891522 | Msa0296050:intron | 30.0% |
| AATAGATATGATCTGTGTTG+TGG | + | chr2_3:48891651-48891670 | Msa0296050:intron | 30.0% | |
| ! | TCTTTTCTGCATGCAAATAT+TGG | + | chr2_3:48891758-48891777 | Msa0296050:CDS | 30.0% |
| TGTTACTCCTTAAATTCAGT+TGG | + | chr2_3:48891881-48891900 | Msa0296050:CDS | 30.0% | |
| TAAATTGCAAGATATCTTCG+AGG | - | chr2_3:48891932-48891951 | None:intergenic | 30.0% | |
| TCTATATGGAAAACCAAGAT+AGG | - | chr2_3:48892256-48892275 | None:intergenic | 30.0% | |
| ! | GTTTTTCTAATGAGCTGTAA+TGG | + | chr2_3:48892319-48892338 | Msa0296050:intron | 30.0% |
| TATGGATGTGACTTATAGAT+GGG | + | chr2_3:48892726-48892745 | Msa0296050:intron | 30.0% | |
| TATTTCTCATGCAGCTTATT+GGG | + | chr2_3:48892789-48892808 | Msa0296050:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr2_3:48893161-48893180 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr2_3:48893298-48893317 | None:intergenic | 30.0% | |
| TCAAAAAAGTCAATCCAAAC+AGG | + | chr2_3:48893561-48893580 | Msa0296050:intron | 30.0% | |
| ATACACGGAATACAAAATTG+AGG | - | chr2_3:48893629-48893648 | None:intergenic | 30.0% | |
| TGCCTACATACATAACAAAA+TGG | - | chr2_3:48893660-48893679 | None:intergenic | 30.0% | |
| CCCTTAAGAGAATATTTGAA+TGG | + | chr2_3:48894035-48894054 | Msa0296050:three_prime_UTR | 30.0% | |
| GTATGCAACATAAGTTAAAG+GGG | - | chr2_3:48894080-48894099 | None:intergenic | 30.0% | |
| !! | TTGCATACTTTTGTTGTACA+TGG | + | chr2_3:48894092-48894111 | Msa0296050:three_prime_UTR | 30.0% |
| !! | TGCATACTTTTGTTGTACAT+GGG | + | chr2_3:48894093-48894112 | Msa0296050:three_prime_UTR | 30.0% |
| AAAAATCATCCATACAAGCA+AGG | - | chr2_3:48894145-48894164 | None:intergenic | 30.0% | |
| !!! | TGCTTGTATGGATGATTTTT+TGG | + | chr2_3:48894145-48894164 | Msa0296050:three_prime_UTR | 30.0% |
| !!! | GCTTGTATGGATGATTTTTT+GGG | + | chr2_3:48894146-48894165 | Msa0296050:three_prime_UTR | 30.0% |
| !!! | ATAGTTCATTTTGGGTTGTA+GGG | - | chr2_3:48894182-48894201 | None:intergenic | 30.0% |
| !!! | TATAGTTCATTTTGGGTTGT+AGG | - | chr2_3:48894183-48894202 | None:intergenic | 30.0% |
| ACCCAAAATGAACTATAATG+TGG | + | chr2_3:48894186-48894205 | Msa0296050:three_prime_UTR | 30.0% | |
| ! | GCCACATTATAGTTCATTTT+GGG | - | chr2_3:48894190-48894209 | None:intergenic | 30.0% |
| ! | TGCCACATTATAGTTCATTT+TGG | - | chr2_3:48894191-48894210 | None:intergenic | 30.0% |
| TTTCTCCAGATTCATTGTTT+CGG | - | chr2_3:48894313-48894332 | None:intergenic | 30.0% | |
| CCAGTTCCGCAAAAAAAAAT+TGG | - | chr2_3:48889975-48889994 | None:intergenic | 35.0% | |
| !!! | CCAATTTTTTTTTGCGGAAC+TGG | + | chr2_3:48889972-48889991 | Msa0296050:five_prime_UTR | 35.0% |
| GAGTGAATAAAAAGAAGACC+TGG | - | chr2_3:48890154-48890173 | None:intergenic | 35.0% | |
| AATAGGAAGTAGCTCATGTT+TGG | + | chr2_3:48890351-48890370 | Msa0296050:intron | 35.0% | |
| !! | CTTGTTTTCACAAGCTATCT+TGG | + | chr2_3:48890441-48890460 | Msa0296050:intron | 35.0% |
| !! | TGTTTGGATTGGCTTATTTG+AGG | - | chr2_3:48890562-48890581 | None:intergenic | 35.0% |
| AAGAAAGAAGAGACACAAAC+GGG | - | chr2_3:48890878-48890897 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGACACAAA+CGG | - | chr2_3:48890879-48890898 | None:intergenic | 35.0% | |
| !! | CTCTTCTTTCTTCTGAAATC+TGG | + | chr2_3:48890886-48890905 | Msa0296050:intron | 35.0% |
| ! | TTTTCTGGACATCTTTGAGT+CGG | - | chr2_3:48891122-48891141 | None:intergenic | 35.0% |
| ATCCATTTAATGGAAGGAAG+TGG | + | chr2_3:48891143-48891162 | Msa0296050:CDS | 35.0% | |
| TGCTCATACTCACAAAACAT+TGG | - | chr2_3:48891188-48891207 | None:intergenic | 35.0% | |
| TATGAGCATATTCCCTTGAT+TGG | + | chr2_3:48891200-48891219 | Msa0296050:intron | 35.0% | |
| AGAAAGCAAAGTGAGCATTA+TGG | - | chr2_3:48891379-48891398 | None:intergenic | 35.0% | |
| GTTGTGTTGTGTATGTTACT+AGG | + | chr2_3:48891688-48891707 | Msa0296050:intron | 35.0% | |
| GTAAACAGTCTCATTGACAA+AGG | + | chr2_3:48891710-48891729 | Msa0296050:CDS | 35.0% | |
| TCATTGACAAAGGACAACTT+TGG | + | chr2_3:48891720-48891739 | Msa0296050:CDS | 35.0% | |
| TGCAAATATTGGACACCTAA+TGG | + | chr2_3:48891769-48891788 | Msa0296050:CDS | 35.0% | |
| AATATTGGACACCTAATGGT+AGG | + | chr2_3:48891773-48891792 | Msa0296050:intron | 35.0% | |
| ! | GGAATTTCATTGGCTATTGT+AGG | - | chr2_3:48891993-48892012 | None:intergenic | 35.0% |
| TTGGAGGTAAGGAATTTCAT+TGG | - | chr2_3:48892003-48892022 | None:intergenic | 35.0% | |
| AAGATAGAAAACTGAGATGC+TGG | + | chr2_3:48892277-48892296 | Msa0296050:intron | 35.0% | |
| CTAATGAGCTGTAATGGTTT+AGG | + | chr2_3:48892325-48892344 | Msa0296050:intron | 35.0% | |
| !! | TGTAATGGTTTAGGTTGGAT+CGG | + | chr2_3:48892334-48892353 | Msa0296050:intron | 35.0% |
| ACAAGTAATTGCCCTCAATA+TGG | + | chr2_3:48892424-48892443 | Msa0296050:CDS | 35.0% | |
| TGAGACACTTACCATATTGA+GGG | - | chr2_3:48892438-48892457 | None:intergenic | 35.0% | |
| ATGAGACACTTACCATATTG+AGG | - | chr2_3:48892439-48892458 | None:intergenic | 35.0% | |
| !!! | TGTTAGTTTTGCAACTTCAC+TGG | + | chr2_3:48892485-48892504 | Msa0296050:intron | 35.0% |
| GTAAAATTTCTGTTCCACTG+TGG | - | chr2_3:48892555-48892574 | None:intergenic | 35.0% | |
| TAACTTAGACCATCACTCTA+TGG | + | chr2_3:48892708-48892727 | Msa0296050:intron | 35.0% | |
| CTATGGATGTGACTTATAGA+TGG | + | chr2_3:48892725-48892744 | Msa0296050:intron | 35.0% | |
| TTTCCTTGTCTGTGTTCTAA+CGG | + | chr2_3:48892760-48892779 | Msa0296050:intron | 35.0% | |
| GTATTTCTCATGCAGCTTAT+TGG | + | chr2_3:48892788-48892807 | Msa0296050:intron | 35.0% | |
| CTTATTGGGTTATCATCAAC+TGG | + | chr2_3:48892803-48892822 | Msa0296050:CDS | 35.0% | |
| AAGGGCAGTAAAAAAATCCA+TGG | - | chr2_3:48892869-48892888 | None:intergenic | 35.0% | |
| CCTTTGTTCAGTAAAAGTTG+CGG | + | chr2_3:48892910-48892929 | Msa0296050:intron | 35.0% | |
| CTTTGTTCAGTAAAAGTTGC+GGG | + | chr2_3:48892911-48892930 | Msa0296050:intron | 35.0% | |
| !!! | TTTTAAAATGTGGCATGACC+TGG | + | chr2_3:48892977-48892996 | Msa0296050:intron | 35.0% |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr2_3:48893284-48893303 | None:intergenic | 35.0% | |
| AGGTTTATGCACGGTTATTA+AGG | - | chr2_3:48893375-48893394 | None:intergenic | 35.0% | |
| ! | AGTCGTTTAAGGTTTATGCA+CGG | - | chr2_3:48893384-48893403 | None:intergenic | 35.0% |
| GACTATTATTTAGAGACGGA+GGG | + | chr2_3:48893400-48893419 | Msa0296050:intron | 35.0% | |
| TTTCTATCATGATGAGCTTG+TGG | + | chr2_3:48893448-48893467 | Msa0296050:intron | 35.0% | |
| AACAAGCTGATGACAACTTA+TGG | + | chr2_3:48893472-48893491 | Msa0296050:intron | 35.0% | |
| GAAACTGTTTGGAAGACTTA+TGG | - | chr2_3:48893516-48893535 | None:intergenic | 35.0% | |
| !! | ACATAGTTTTTAGGCCTGTT+TGG | - | chr2_3:48893578-48893597 | None:intergenic | 35.0% |
| AAACAGGCCTAAAAACTATG+TGG | + | chr2_3:48893577-48893596 | Msa0296050:intron | 35.0% | |
| ! | TCCATGTCCACATAGTTTTT+AGG | - | chr2_3:48893587-48893606 | None:intergenic | 35.0% |
| ! | TTTGTTATGTATGTAGGCAC+TGG | + | chr2_3:48893661-48893680 | Msa0296050:intron | 35.0% |
| AAACTATGCACAGATTACAC+TGG | - | chr2_3:48893715-48893734 | None:intergenic | 35.0% | |
| CATGAATCCACATCTTTAGA+TGG | + | chr2_3:48893835-48893854 | Msa0296050:CDS | 35.0% | |
| TCTTCTTCCATCTAAAGATG+TGG | - | chr2_3:48893845-48893864 | None:intergenic | 35.0% | |
| AATCTCTTCAAGATTACGAG+AGG | + | chr2_3:48893892-48893911 | Msa0296050:CDS | 35.0% | |
| ! | TGTTTCTATTTCCATGGCTT+AGG | - | chr2_3:48893919-48893938 | None:intergenic | 35.0% |
| CATAAGTTAAAGGGGTTTCA+GGG | - | chr2_3:48894072-48894091 | None:intergenic | 35.0% | |
| ACATAAGTTAAAGGGGTTTC+AGG | - | chr2_3:48894073-48894092 | None:intergenic | 35.0% | |
| !! | GCATACTTTTGTTGTACATG+GGG | + | chr2_3:48894094-48894113 | Msa0296050:three_prime_UTR | 35.0% |
| !! | GTTTGTTTTCCTTGCTTGTA+TGG | + | chr2_3:48894133-48894152 | Msa0296050:three_prime_UTR | 35.0% |
| !!! | ATGGATGATTTTTTGGGTCT+AGG | + | chr2_3:48894152-48894171 | Msa0296050:three_prime_UTR | 35.0% |
| AGATTCATTGTTTCGGATGT+TGG | - | chr2_3:48894306-48894325 | None:intergenic | 35.0% | |
| AACATCCGAAACAATGAATC+TGG | + | chr2_3:48894305-48894324 | Msa0296050:three_prime_UTR | 35.0% | |
| !!! | TTTTTTTGCGGAACTGGAGA+AGG | + | chr2_3:48889978-48889997 | Msa0296050:five_prime_UTR | 40.0% |
| !!! | TTTTTTGCGGAACTGGAGAA+GGG | + | chr2_3:48889979-48889998 | Msa0296050:five_prime_UTR | 40.0% |
| GCAATGATATCAAGTGGGTA+AGG | - | chr2_3:48890056-48890075 | None:intergenic | 40.0% | |
| AACGAAGTAGAAAGTGAAGG+CGG | - | chr2_3:48890124-48890143 | None:intergenic | 40.0% | |
| AGGAACGAAGTAGAAAGTGA+AGG | - | chr2_3:48890127-48890146 | None:intergenic | 40.0% | |
| TAAAAAGAAGACCTGGAGAC+AGG | - | chr2_3:48890147-48890166 | None:intergenic | 40.0% | |
| AGACTGTTTGAGAGAGCTTA+TGG | - | chr2_3:48890761-48890780 | None:intergenic | 40.0% | |
| AGAAAGAAGAGACACAAACG+GGG | - | chr2_3:48890877-48890896 | None:intergenic | 40.0% | |
| !! | CTTCTGAAATCTGGATGTTG+CGG | + | chr2_3:48890895-48890914 | Msa0296050:intron | 40.0% |
| CAAAGATGCCTTCAACTCAA+AGG | + | chr2_3:48890995-48891014 | Msa0296050:CDS | 40.0% | |
| GTCCACTTCCTTCCATTAAA+TGG | - | chr2_3:48891148-48891167 | None:intergenic | 40.0% | |
| ! | CTTTAGAGGAGCCAAATTCT+AGG | - | chr2_3:48891245-48891264 | None:intergenic | 40.0% |
| TTACACTCCACTCACTTTAG+AGG | - | chr2_3:48891259-48891278 | None:intergenic | 40.0% | |
| AGTGGGACCAACTGAATTTA+AGG | - | chr2_3:48891891-48891910 | None:intergenic | 40.0% | |
| TCAAACGTACTTGTCTCTCT+TGG | + | chr2_3:48892227-48892246 | Msa0296050:intron | 40.0% | |
| TCTCTCTTGGATTCCTATCT+TGG | + | chr2_3:48892240-48892259 | Msa0296050:intron | 40.0% | |
| TGAGCTGTAATGGTTTAGGT+TGG | + | chr2_3:48892329-48892348 | Msa0296050:intron | 40.0% | |
| TTAAGGCACAAAGACCTTGT+AGG | + | chr2_3:48892371-48892390 | Msa0296050:CDS | 40.0% | |
| !!! | CTTTTTTACCACCTCCTACA+AGG | - | chr2_3:48892388-48892407 | None:intergenic | 40.0% |
| GCAGAATCAGAAGTAACACA+GGG | - | chr2_3:48892463-48892482 | None:intergenic | 40.0% | |
| AGCAGAATCAGAAGTAACAC+AGG | - | chr2_3:48892464-48892483 | None:intergenic | 40.0% | |
| !! | TTGTTCGGTAGAAGTGTTGT+TGG | + | chr2_3:48892648-48892667 | Msa0296050:intron | 40.0% |
| !! | AAGTGTTGTTGGTTCATGCA+AGG | + | chr2_3:48892659-48892678 | Msa0296050:intron | 40.0% |
| !! | AGTGTTGTTGGTTCATGCAA+GGG | + | chr2_3:48892660-48892679 | Msa0296050:intron | 40.0% |
| AAGTCACATCCATAGAGTGA+TGG | - | chr2_3:48892720-48892739 | None:intergenic | 40.0% | |
| !! | ATCAACTGGCATTGACAACT+GGG | + | chr2_3:48892817-48892836 | Msa0296050:CDS | 40.0% |
| ! | CCGCAACTTTTACTGAACAA+AGG | - | chr2_3:48892913-48892932 | None:intergenic | 40.0% |
| ! | CTCGAATTTAGAGTCATTCC+AGG | - | chr2_3:48892998-48893017 | None:intergenic | 40.0% |
| GACAATTATTGTGAGACGGA+GGG | - | chr2_3:48893157-48893176 | None:intergenic | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | - | chr2_3:48893158-48893177 | None:intergenic | 40.0% | |
| CGACTATTATTTAGAGACGG+AGG | + | chr2_3:48893399-48893418 | Msa0296050:intron | 40.0% | |
| GCCTAAAAACTATGTGGACA+TGG | + | chr2_3:48893583-48893602 | Msa0296050:intron | 40.0% | |
| TTTCAGTTAGGAGGCTTGAT+TGG | + | chr2_3:48893772-48893791 | Msa0296050:intron | 40.0% | |
| ATTGCTGCATCATGGCTTAT+TGG | + | chr2_3:48893799-48893818 | Msa0296050:CDS | 40.0% | |
| GAAACATTTCATCGGCCTAT+TGG | + | chr2_3:48893933-48893952 | Msa0296050:exon | 40.0% | |
| CTTAAGGGAAGCTTACAACA+GGG | - | chr2_3:48894023-48894042 | None:intergenic | 40.0% | |
| TCTTAAGGGAAGCTTACAAC+AGG | - | chr2_3:48894024-48894043 | None:intergenic | 40.0% | |
| !! | GTTTTTCAGAATGGTAGCGA+AGG | - | chr2_3:48894235-48894254 | None:intergenic | 40.0% |
| !!! | GTGGGATTGGTTTTTCAGAA+TGG | - | chr2_3:48894244-48894263 | None:intergenic | 40.0% |
| AATGATGTTGAATTCCCACC+CGG | - | chr2_3:48894281-48894300 | None:intergenic | 40.0% | |
| TTGCAAACCGGTGACAGAAA+TGG | - | chr2_3:48890026-48890045 | None:intergenic | 45.0% | |
| !! | ATTTCTGTCACCGGTTTGCA+AGG | + | chr2_3:48890025-48890044 | Msa0296050:CDS | 45.0% |
| CGGTGGCAATGATATCAAGT+GGG | - | chr2_3:48890061-48890080 | None:intergenic | 45.0% | |
| CAAGAGAGACATGTGAGTCA+AGG | - | chr2_3:48890928-48890947 | None:intergenic | 45.0% | |
| TGCTCCCGTGTTTAGATTGA+AGG | + | chr2_3:48890961-48890980 | Msa0296050:CDS | 45.0% | |
| CTCACAAAACATTGGCAGCA+AGG | - | chr2_3:48891180-48891199 | None:intergenic | 45.0% | |
| !! | TTTGGCTCCTCTAAAGTGAG+TGG | + | chr2_3:48891249-48891268 | Msa0296050:intron | 45.0% |
| CAATAAGCACTCTCACCAAG+AGG | - | chr2_3:48891521-48891540 | None:intergenic | 45.0% | |
| CAGGCATGACAGAACAAACT+TGG | - | chr2_3:48891816-48891835 | None:intergenic | 45.0% | |
| ! | CAAGTTTGTTCTGTCATGCC+TGG | + | chr2_3:48891814-48891833 | Msa0296050:intron | 45.0% |
| AAATTCAGTTGGTCCCACTG+TGG | + | chr2_3:48891892-48891911 | Msa0296050:CDS | 45.0% | |
| GCGGTTACTTGCAATTGAAG+AGG | - | chr2_3:48891960-48891979 | None:intergenic | 45.0% | |
| CAGGTGCAGCTATGAGTTAT+TGG | + | chr2_3:48892053-48892072 | Msa0296050:intron | 45.0% | |
| TTCTGCAAAATGCCTGCAGT+AGG | + | chr2_3:48892076-48892095 | Msa0296050:CDS | 45.0% | |
| !!! | CGGTTGCGGTGTTTGTTTTA+AGG | + | chr2_3:48892354-48892373 | Msa0296050:CDS | 45.0% |
| AGTTATCACGAGACAGTGTG+TGG | + | chr2_3:48892512-48892531 | Msa0296050:intron | 45.0% | |
| ! | ATGCTTCTGATTAGCCACAG+TGG | + | chr2_3:48892538-48892557 | Msa0296050:intron | 45.0% |
| GGTTCATGCAAGGGTTATGT+CGG | + | chr2_3:48892669-48892688 | Msa0296050:intron | 45.0% | |
| GTTCATGCAAGGGTTATGTC+GGG | + | chr2_3:48892670-48892689 | Msa0296050:intron | 45.0% | |
| !! | CATCAACTGGCATTGACAAC+TGG | + | chr2_3:48892816-48892835 | Msa0296050:CDS | 45.0% |
| !! | TCAACTGGCATTGACAACTG+GGG | + | chr2_3:48892818-48892837 | Msa0296050:CDS | 45.0% |
| AACTGGGGACATGTAAGTGT+AGG | + | chr2_3:48892833-48892852 | Msa0296050:intron | 45.0% | |
| ! | GTGTAGGAGTGTATCATCCA+TGG | + | chr2_3:48892849-48892868 | Msa0296050:intron | 45.0% |
| TTGGTGGAATTGCTGCATCA+TGG | + | chr2_3:48893791-48893810 | Msa0296050:CDS | 45.0% | |
| GCTTGCGCTTGTAATCCAAT+AGG | - | chr2_3:48893951-48893970 | None:intergenic | 45.0% | |
| TCTGAAAAACCAATCCCACC+TGG | + | chr2_3:48894245-48894264 | Msa0296050:three_prime_UTR | 45.0% | |
| ACCGGTGACAGAAATGGCTT+GGG | - | chr2_3:48890020-48890039 | None:intergenic | 50.0% | |
| AACCGGTGACAGAAATGGCT+TGG | - | chr2_3:48890021-48890040 | None:intergenic | 50.0% | |
| TAAGGACCCACCTTGCAAAC+CGG | - | chr2_3:48890038-48890057 | None:intergenic | 50.0% | |
| GCGGTGGCAATGATATCAAG+TGG | - | chr2_3:48890062-48890081 | None:intergenic | 50.0% | |
| GTAGAAAGTGAAGGCGGAGA+CGG | - | chr2_3:48890118-48890137 | None:intergenic | 50.0% | |
| TCTACTTCGTTCCTGTCTCC+AGG | + | chr2_3:48890133-48890152 | Msa0296050:CDS | 50.0% | |
| GTTGCTCGCTTCAAATGAGC+CGG | + | chr2_3:48891406-48891425 | Msa0296050:intron | 50.0% | |
| CCACGACAAAAGCTTGCCTT+GGG | - | chr2_3:48891594-48891613 | None:intergenic | 50.0% | |
| ! | CCAAGGCAAGCTTTTGTCGT+GGG | + | chr2_3:48891592-48891611 | Msa0296050:CDS | 50.0% |
| ! | CAAGGCAAGCTTTTGTCGTG+GGG | + | chr2_3:48891593-48891612 | Msa0296050:CDS | 50.0% |
| CCACTAAAGCTCTCCACAGT+GGG | - | chr2_3:48891908-48891927 | None:intergenic | 50.0% | |
| ACCACTAAAGCTCTCCACAG+TGG | - | chr2_3:48891909-48891928 | None:intergenic | 50.0% | |
| ! | GGTGCGTCAGGAGCAATTTT+TGG | + | chr2_3:48892097-48892116 | Msa0296050:CDS | 50.0% |
| !! | GGTTTAGGTTGGATCGGTTG+CGG | + | chr2_3:48892340-48892359 | Msa0296050:intron | 50.0% |
| AGGCACAAAGACCTTGTAGG+AGG | + | chr2_3:48892374-48892393 | Msa0296050:CDS | 50.0% | |
| CACAAAGACCTTGTAGGAGG+TGG | + | chr2_3:48892377-48892396 | Msa0296050:CDS | 50.0% | |
| GCACCGTTAGAACACAGACA+AGG | - | chr2_3:48892766-48892785 | None:intergenic | 50.0% | |
| CAGTTAGGAGGCTTGATTGG+TGG | + | chr2_3:48893775-48893794 | Msa0296050:intron | 50.0% | |
| CATGGCTTATTGGACCTGCA+TGG | + | chr2_3:48893809-48893828 | Msa0296050:CDS | 50.0% | |
| GTGGATTCATGCTTCCATGC+AGG | - | chr2_3:48893826-48893845 | None:intergenic | 50.0% | |
| TTACGAGAGGACCTAAGCCA+TGG | + | chr2_3:48893905-48893924 | Msa0296050:CDS | 50.0% | |
| GCCCAAGCCATTTCTGTCAC+CGG | + | chr2_3:48890016-48890035 | Msa0296050:CDS | 55.0% | |
| !! | TCTGTCACCGGTTTGCAAGG+TGG | + | chr2_3:48890028-48890047 | Msa0296050:CDS | 55.0% |
| !! | CTGTCACCGGTTTGCAAGGT+GGG | + | chr2_3:48890029-48890048 | Msa0296050:CDS | 55.0% |
| GACACGGTGGCTGAAATGGA+GGG | - | chr2_3:48890090-48890109 | None:intergenic | 55.0% | |
| AGACACGGTGGCTGAAATGG+AGG | - | chr2_3:48890091-48890110 | None:intergenic | 55.0% | |
| AAAGTGAAGGCGGAGACGGT+GGG | - | chr2_3:48890114-48890133 | None:intergenic | 55.0% | |
| ! | GCATTTCCAGAGCTGGCTTC+AGG | - | chr2_3:48891100-48891119 | None:intergenic | 55.0% |
| TGAGTCGGCATTTCCAGAGC+TGG | - | chr2_3:48891107-48891126 | None:intergenic | 55.0% | |
| GTTGCGCAACTTGCAACCCA+AGG | + | chr2_3:48891575-48891594 | Msa0296050:CDS | 55.0% | |
| ! | CCCAAGGCAAGCTTTTGTCG+TGG | + | chr2_3:48891591-48891610 | Msa0296050:CDS | 55.0% |
| CCCACGACAAAAGCTTGCCT+TGG | - | chr2_3:48891595-48891614 | None:intergenic | 55.0% | |
| ! | GCTTTTGTCGTGGGGAGCAA+AGG | + | chr2_3:48891601-48891620 | Msa0296050:CDS | 55.0% |
| TGTCGTGGGGAGCAAAGGTA+AGG | + | chr2_3:48891606-48891625 | Msa0296050:intron | 55.0% | |
| ! | CCCACTGTGGAGAGCTTTAG+TGG | + | chr2_3:48891905-48891924 | Msa0296050:CDS | 55.0% |
| TGTTGAATTCCCACCCGGAG+CGG | - | chr2_3:48894276-48894295 | None:intergenic | 55.0% | |
| GTGGCTGAAATGGAGGGACG+CGG | - | chr2_3:48890084-48890103 | None:intergenic | 60.0% | |
| GGGAGACACGGTGGCTGAAA+TGG | - | chr2_3:48890094-48890113 | None:intergenic | 60.0% | |
| GAAAGTGAAGGCGGAGACGG+TGG | - | chr2_3:48890115-48890134 | None:intergenic | 60.0% | |
| GGAAGACCTGAAGCCAGCTC+TGG | + | chr2_3:48891091-48891110 | Msa0296050:CDS | 60.0% | |
| ATGCCTGCAGTAGGTGCGTC+AGG | + | chr2_3:48892085-48892104 | Msa0296050:CDS | 60.0% | |
| GCTGAAATGGAGGGACGCGG+CGG | - | chr2_3:48890081-48890100 | None:intergenic | 65.0% | |
| GCTCCTGACGCACCTACTGC+AGG | - | chr2_3:48892091-48892110 | None:intergenic | 65.0% | |
| GCGGTGCATCCAGGTGGGAT+TGG | - | chr2_3:48894257-48894276 | None:intergenic | 65.0% | |
| GAAATGGAGGGACGCGGCGG+TGG | - | chr2_3:48890078-48890097 | None:intergenic | 70.0% | |
| GGAGACGGTGGGAGACACGG+TGG | - | chr2_3:48890103-48890122 | None:intergenic | 70.0% | |
| GGCGGAGACGGTGGGAGACA+CGG | - | chr2_3:48890106-48890125 | None:intergenic | 70.0% | |
| CCGGAGCGGTGCATCCAGGT+GGG | - | chr2_3:48894262-48894281 | None:intergenic | 70.0% | |
| CCCACCTGGATGCACCGCTC+CGG | + | chr2_3:48894259-48894278 | Msa0296050:three_prime_UTR | 70.0% | |
| CCACCTGGATGCACCGCTCC+GGG | + | chr2_3:48894260-48894279 | Msa0296050:three_prime_UTR | 70.0% | |
| CTGGATGCACCGCTCCGGGT+GGG | + | chr2_3:48894264-48894283 | Msa0296050:three_prime_UTR | 70.0% | |
| CCCGGAGCGGTGCATCCAGG+TGG | - | chr2_3:48894263-48894282 | None:intergenic | 75.0% | |
| CCACCCGGAGCGGTGCATCC+AGG | - | chr2_3:48894266-48894285 | None:intergenic | 75.0% | |
| CCTGGATGCACCGCTCCGGG+TGG | + | chr2_3:48894263-48894282 | Msa0296050:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48889943 | 48894344 | 48889943 | ID=Msa0296050;Name=Msa0296050 |
| chr2_3 | mRNA | 48889943 | 48894344 | 48889943 | ID=Msa0296050-mRNA-1;Parent=Msa0296050;Name=Msa0296050-mRNA-1;_AED=0.09;_eAED=0.09;_QI=65|1|1|1|1|1|9|411|327 |
| chr2_3 | exon | 48889943 | 48890154 | 48889943 | ID=Msa0296050-mRNA-1:exon:15439;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48890956 | 48891194 | 48890956 | ID=Msa0296050-mRNA-1:exon:15440;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48891568 | 48891622 | 48891568 | ID=Msa0296050-mRNA-1:exon:15441;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48891710 | 48891790 | 48891710 | ID=Msa0296050-mRNA-1:exon:15442;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48891875 | 48891971 | 48891875 | ID=Msa0296050-mRNA-1:exon:15443;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48892056 | 48892123 | 48892056 | ID=Msa0296050-mRNA-1:exon:15444;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48892347 | 48892445 | 48892347 | ID=Msa0296050-mRNA-1:exon:15445;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48892803 | 48892844 | 48892803 | ID=Msa0296050-mRNA-1:exon:15446;Parent=Msa0296050-mRNA-1 |
| chr2_3 | exon | 48893778 | 48894344 | 48893778 | ID=Msa0296050-mRNA-1:exon:15447;Parent=Msa0296050-mRNA-1 |
| chr2_3 | five_prime_UTR | 48889943 | 48890007 | 48889943 | ID=Msa0296050-mRNA-1:five_prime_utr;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48890008 | 48890154 | 48890008 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48890956 | 48891194 | 48890956 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48891568 | 48891622 | 48891568 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48891710 | 48891790 | 48891710 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48891875 | 48891971 | 48891875 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48892056 | 48892123 | 48892056 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48892347 | 48892445 | 48892347 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48892803 | 48892844 | 48892803 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | CDS | 48893778 | 48893933 | 48893778 | ID=Msa0296050-mRNA-1:cds;Parent=Msa0296050-mRNA-1 |
| chr2_3 | three_prime_UTR | 48893934 | 48894344 | 48893934 | ID=Msa0296050-mRNA-1:three_prime_utr;Parent=Msa0296050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
