Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083250 | XP_003626088.2 | 93.697 | 476 | 13 | 5 | 1 | 474 | 1 | 461 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083250 | sp|O80731|PAE3_ARATH | 63.785 | 428 | 143 | 2 | 1 | 428 | 1 | 416 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083250 | A0A396H778 | 93.697 | 476 | 13 | 5 | 1 | 474 | 1 | 461 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1040510 | Msa1083250 | 0.916907 | 1.011123e-85 | -8.615850e-47 |
| Msa1083250 | Msa1085610 | 0.803003 | 4.288439e-49 | -8.615850e-47 |
| Msa1083250 | Msa1127780 | 0.892747 | 1.193191e-74 | -8.615850e-47 |
| Msa0327990 | Msa1083250 | 0.803801 | 2.930427e-49 | -8.615850e-47 |
| Msa0526930 | Msa1083250 | 0.931241 | 5.049380e-94 | -8.615850e-47 |
| Msa0576020 | Msa1083250 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0576120 | Msa1083250 | 0.806934 | 6.462788e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083250 | MtrunA17_Chr7g0270931 | 93.697 | 476 | 13 | 5 | 1 | 474 | 1 | 461 | 0.0 | 904 |
| Msa1083250 | MtrunA17_Chr1g0193761 | 79.412 | 374 | 77 | 0 | 54 | 427 | 29 | 402 | 0.0 | 652 |
| Msa1083250 | MtrunA17_Chr1g0193381 | 66.905 | 420 | 128 | 2 | 8 | 427 | 7 | 415 | 0.0 | 607 |
| Msa1083250 | MtrunA17_Chr7g0271231 | 71.311 | 366 | 105 | 0 | 62 | 427 | 53 | 418 | 0.0 | 586 |
| Msa1083250 | MtrunA17_Chr4g0069571 | 70.380 | 368 | 109 | 0 | 61 | 428 | 54 | 421 | 0.0 | 565 |
| Msa1083250 | MtrunA17_Chr5g0408881 | 53.591 | 362 | 166 | 1 | 65 | 424 | 29 | 390 | 1.65e-153 | 443 |
| Msa1083250 | MtrunA17_Chr8g0369681 | 50.269 | 372 | 183 | 1 | 58 | 427 | 20 | 391 | 3.46e-149 | 431 |
| Msa1083250 | MtrunA17_Chr1g0203101 | 54.032 | 372 | 166 | 3 | 60 | 426 | 34 | 405 | 9.94e-146 | 423 |
| Msa1083250 | MtrunA17_Chr1g0203121 | 53.226 | 372 | 169 | 3 | 60 | 426 | 34 | 405 | 7.63e-144 | 418 |
| Msa1083250 | MtrunA17_Chr8g0369651 | 48.919 | 370 | 187 | 1 | 61 | 428 | 24 | 393 | 1.40e-143 | 416 |
| Msa1083250 | MtrunA17_Chr7g0238491 | 51.075 | 372 | 172 | 4 | 64 | 427 | 56 | 425 | 2.67e-138 | 404 |
| Msa1083250 | MtrunA17_Chr5g0418101 | 48.767 | 365 | 181 | 2 | 64 | 426 | 41 | 401 | 3.28e-135 | 395 |
| Msa1083250 | MtrunA17_Chr1g0163701 | 55.340 | 103 | 46 | 0 | 245 | 347 | 270 | 372 | 2.20e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083250 | AT3G62060.2 | 70.833 | 384 | 111 | 1 | 58 | 440 | 48 | 431 | 0.0 | 594 |
| Msa1083250 | AT2G46930.1 | 63.785 | 428 | 143 | 2 | 1 | 428 | 1 | 416 | 0.0 | 592 |
| Msa1083250 | AT3G05910.1 | 72.678 | 366 | 99 | 1 | 62 | 427 | 50 | 414 | 0.0 | 591 |
| Msa1083250 | AT3G62060.1 | 72.237 | 371 | 102 | 1 | 58 | 427 | 48 | 418 | 0.0 | 589 |
| Msa1083250 | AT1G57590.1 | 71.154 | 364 | 105 | 0 | 64 | 427 | 79 | 442 | 0.0 | 583 |
| Msa1083250 | AT5G26670.1 | 71.311 | 366 | 105 | 0 | 62 | 427 | 50 | 415 | 0.0 | 578 |
| Msa1083250 | AT5G26670.3 | 69.360 | 297 | 91 | 0 | 131 | 427 | 1 | 297 | 4.46e-161 | 457 |
| Msa1083250 | AT5G26670.2 | 69.360 | 297 | 91 | 0 | 131 | 427 | 1 | 297 | 4.46e-161 | 457 |
| Msa1083250 | AT5G26670.4 | 69.360 | 297 | 91 | 0 | 131 | 427 | 1 | 297 | 4.46e-161 | 457 |
| Msa1083250 | AT4G19420.1 | 55.285 | 369 | 163 | 1 | 61 | 427 | 21 | 389 | 3.38e-159 | 457 |
| Msa1083250 | AT4G19420.2 | 55.285 | 369 | 163 | 1 | 61 | 427 | 21 | 389 | 3.38e-159 | 457 |
| Msa1083250 | AT1G09550.1 | 58.721 | 344 | 141 | 1 | 63 | 406 | 40 | 382 | 2.75e-153 | 441 |
| Msa1083250 | AT4G19420.4 | 50.495 | 404 | 163 | 2 | 61 | 427 | 21 | 424 | 5.32e-152 | 440 |
| Msa1083250 | AT5G23870.2 | 53.533 | 368 | 165 | 4 | 65 | 426 | 35 | 402 | 8.48e-147 | 427 |
| Msa1083250 | AT5G23870.1 | 53.533 | 368 | 165 | 4 | 65 | 426 | 35 | 402 | 8.55e-147 | 426 |
| Msa1083250 | AT5G23870.4 | 53.533 | 368 | 165 | 4 | 65 | 426 | 35 | 402 | 8.55e-147 | 426 |
| Msa1083250 | AT3G05910.2 | 75.194 | 258 | 63 | 1 | 62 | 319 | 50 | 306 | 1.03e-146 | 422 |
| Msa1083250 | AT5G23870.3 | 53.533 | 368 | 165 | 4 | 65 | 426 | 35 | 402 | 1.88e-146 | 426 |
| Msa1083250 | AT3G09410.1 | 48.454 | 388 | 197 | 1 | 43 | 427 | 39 | 426 | 1.43e-142 | 416 |
| Msa1083250 | AT5G45280.2 | 48.476 | 361 | 183 | 2 | 65 | 422 | 24 | 384 | 2.07e-136 | 399 |
| Msa1083250 | AT4G19410.1 | 48.199 | 361 | 184 | 2 | 65 | 422 | 24 | 384 | 1.03e-135 | 397 |
| Msa1083250 | AT3G09405.1 | 46.316 | 380 | 199 | 2 | 46 | 422 | 32 | 409 | 2.63e-130 | 384 |
| Msa1083250 | AT4G19410.2 | 48.547 | 344 | 175 | 1 | 65 | 406 | 24 | 367 | 3.41e-130 | 387 |
| Msa1083250 | AT3G09410.3 | 48.159 | 353 | 180 | 1 | 43 | 392 | 39 | 391 | 1.87e-126 | 373 |
| Msa1083250 | AT5G45280.1 | 50.877 | 285 | 138 | 1 | 65 | 347 | 24 | 308 | 1.19e-111 | 335 |
| Msa1083250 | AT3G09405.2 | 45.215 | 303 | 161 | 2 | 123 | 422 | 2 | 302 | 7.86e-101 | 304 |
| Msa1083250 | AT4G19420.3 | 58.744 | 223 | 90 | 1 | 61 | 281 | 21 | 243 | 2.07e-93 | 285 |
Find 139 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCACTTTGGTAGATTT+TGG | 0.102250 | 7_2:-83538804 | None:intergenic |
| TACTTTGGAGGATCTGAATT+TGG | 0.129041 | 7_2:-83539610 | None:intergenic |
| TGAGAATCAAGTGAGTATTA+TGG | 0.246552 | 7_2:-83542266 | None:intergenic |
| TTGCGATTGCCGTTGGAAAT+TGG | 0.247498 | 7_2:+83540156 | Msa1083250:CDS |
| TGGAGGTGTAGTTAGCTTAC+AGG | 0.258857 | 7_2:+83538981 | Msa1083250:CDS |
| TCATGTAGAACTGATATATC+TGG | 0.286074 | 7_2:+83538934 | Msa1083250:intron |
| CGTGCGGTATTACTGTCTTT+TGG | 0.302124 | 7_2:+83536915 | Msa1083250:five_prime_UTR |
| GAGAATCAAGTGAGTATTAT+GGG | 0.317221 | 7_2:-83542265 | None:intergenic |
| AATGCGGGGCTAGACTTTCT+TGG | 0.319923 | 7_2:-83539526 | None:intergenic |
| AATTTAGAGGACAGAAAATA+TGG | 0.324688 | 7_2:+83538583 | Msa1083250:CDS |
| CTCACTTGAAGACCAGATTA+TGG | 0.340475 | 7_2:-83540238 | None:intergenic |
| CCAATTTGTTCTCCATCTAA+TGG | 0.344065 | 7_2:-83542023 | None:intergenic |
| CCATTAGATGGAGAACAAAT+TGG | 0.348817 | 7_2:+83542023 | Msa1083250:three_prime_UTR |
| GTGTATTATGAGCATGTAAT+TGG | 0.351968 | 7_2:-83541770 | None:intergenic |
| GCTGCACAGCTTCAATTTAG+AGG | 0.354360 | 7_2:+83538570 | Msa1083250:CDS |
| AATCAGAAAATTACCGAAGT+TGG | 0.357974 | 7_2:-83539178 | None:intergenic |
| ACTTTGGAGGATCTGAATTT+GGG | 0.360290 | 7_2:-83539609 | None:intergenic |
| CACACATTGAGGAATCTCTT+TGG | 0.368358 | 7_2:+83538961 | Msa1083250:CDS |
| TACCACTTCCATCCCGGATC+TGG | 0.372412 | 7_2:+83537565 | Msa1083250:CDS |
| ATAATGTTTGTCAGTATGTT+TGG | 0.373579 | 7_2:+83537525 | Msa1083250:intron |
| TTCCATCCCGGATCTGGATC+TGG | 0.382531 | 7_2:+83537571 | Msa1083250:CDS |
| TCTCTCACCTCGGGATATCT+TGG | 0.388144 | 7_2:+83537166 | Msa1083250:CDS |
| TCATAAGAGGTTGAGGCAGC+AGG | 0.400505 | 7_2:-83537238 | None:intergenic |
| ACAAGAATTTATGAATAATC+CGG | 0.416697 | 7_2:-83539785 | None:intergenic |
| TGACAATACCTGCCATAATC+TGG | 0.417076 | 7_2:+83540226 | Msa1083250:CDS |
| CAGCAGATCCTCATGGATCT+TGG | 0.417631 | 7_2:+83539549 | Msa1083250:CDS |
| ACGATTGATTTGTTAATCAA+TGG | 0.421047 | 7_2:+83542242 | Msa1083250:three_prime_UTR |
| TTCTTCTCATTTCTCAGCAC+AGG | 0.421154 | 7_2:-83537055 | None:intergenic |
| TTTCCAACGGCAATCGCAAT+TGG | 0.423077 | 7_2:-83540152 | None:intergenic |
| TCATGCATACCATGTTGTTA+AGG | 0.424811 | 7_2:-83539864 | None:intergenic |
| TGGATGCTCTGCGGGTGGTC+TGG | 0.427319 | 7_2:+83538743 | Msa1083250:CDS |
| CACTCTCCAATGTGTGGTAC+TGG | 0.428230 | 7_2:-83536992 | None:intergenic |
| TCCAATATGGAAAACCTTGT+TGG | 0.438519 | 7_2:-83538649 | None:intergenic |
| GATATAATGAGGCCATTAGA+TGG | 0.438882 | 7_2:+83542011 | Msa1083250:three_prime_UTR |
| GGAAATATTCTCTATGCTAC+AGG | 0.444665 | 7_2:+83541942 | Msa1083250:three_prime_UTR |
| GCTTGAAGTTACAAGATTCA+AGG | 0.445102 | 7_2:+83541862 | Msa1083250:three_prime_UTR |
| AGAGTGAGTGGGATCATAAG+AGG | 0.448337 | 7_2:-83537251 | None:intergenic |
| ATCAGAAAATTACCGAAGTT+GGG | 0.457711 | 7_2:-83539177 | None:intergenic |
| CGATGTCGTTTCAGTTCCAT+TGG | 0.458197 | 7_2:+83537193 | Msa1083250:CDS |
| CAGTAGTAAAATAAGAGTAT+AGG | 0.460029 | 7_2:-83542128 | None:intergenic |
| AAATAGTTGGCTCATTCAAT+TGG | 0.461267 | 7_2:+83537597 | Msa1083250:CDS |
| CATGAGGATCTGCTGAATGC+GGG | 0.468931 | 7_2:-83539541 | None:intergenic |
| TTGCTCAATAATCCAGTGAA+TGG | 0.470456 | 7_2:-83537839 | None:intergenic |
| CATGTAGAACTGATATATCT+GGG | 0.473034 | 7_2:+83538935 | Msa1083250:intron |
| AAAAGTCAACCTTGTGGAGC+GGG | 0.473868 | 7_2:-83541714 | None:intergenic |
| GTGAAATGTTTGAGTGATGC+TGG | 0.478196 | 7_2:+83538819 | Msa1083250:CDS |
| GTAGCCTGTAGGTGGTTGAT+TGG | 0.479626 | 7_2:+83541976 | Msa1083250:three_prime_UTR |
| TAGCCTGTAGGTGGTTGATT+GGG | 0.485955 | 7_2:+83541977 | Msa1083250:three_prime_UTR |
| CAGCCAATTGCGATTGCCGT+TGG | 0.487578 | 7_2:+83540149 | Msa1083250:intron |
| CTGGATCTGGTGCAAATAGT+TGG | 0.489001 | 7_2:+83537584 | Msa1083250:CDS |
| AGTATAGGCACTATCATGTT+GGG | 0.492983 | 7_2:-83542113 | None:intergenic |
| TCAAAGTGAGGTACTGTGAT+GGG | 0.499780 | 7_2:+83537994 | Msa1083250:CDS |
| GAAAGTATGCCAGGTTGGAA+TGG | 0.504383 | 7_2:+83541921 | Msa1083250:three_prime_UTR |
| GACACTAGTGAAAGTATGCC+AGG | 0.505135 | 7_2:+83541912 | Msa1083250:three_prime_UTR |
| TGTTTGGATGGAACTTTACC+TGG | 0.506783 | 7_2:+83537541 | Msa1083250:CDS |
| ATGCTATGTACAAGTGGTGT+TGG | 0.507359 | 7_2:+83542053 | Msa1083250:three_prime_UTR |
| CCTGGTTACCACTTCCATCC+CGG | 0.507770 | 7_2:+83537559 | Msa1083250:CDS |
| ATTCCCAATCAACCACCTAC+AGG | 0.511550 | 7_2:-83541980 | None:intergenic |
| AGGTTGAGGCAGCAGGGGAG+AGG | 0.515308 | 7_2:-83537231 | None:intergenic |
| GAGTGTCAAAATTACTTTGG+AGG | 0.515481 | 7_2:-83539622 | None:intergenic |
| ATCACTCAAACATTTCACTT+TGG | 0.516658 | 7_2:-83538814 | None:intergenic |
| GGAGCTGATTCTAAAGGAGC+AGG | 0.516927 | 7_2:+83537281 | Msa1083250:CDS |
| ATCCATGGAGCTGATTCTAA+AGG | 0.520353 | 7_2:+83537275 | Msa1083250:CDS |
| ATTTGCACCAGATCCAGATC+CGG | 0.521168 | 7_2:-83537578 | None:intergenic |
| TCTAAAGACACAACTTCTGA+TGG | 0.522097 | 7_2:-83537771 | None:intergenic |
| CATAAGAGGTTGAGGCAGCA+GGG | 0.523839 | 7_2:-83537237 | None:intergenic |
| ATGTACAAGTGGTGTTGGAT+TGG | 0.524461 | 7_2:+83542058 | Msa1083250:three_prime_UTR |
| CTCCTTTAGAATCAGCTCCA+TGG | 0.530569 | 7_2:-83537277 | None:intergenic |
| AATAAAGCTGAAGAAAATCC+TGG | 0.530795 | 7_2:+83537860 | Msa1083250:CDS |
| CCGGGATGGAAGTGGTAACC+AGG | 0.532137 | 7_2:-83537559 | None:intergenic |
| AGTGGGATCATAAGAGGTTG+AGG | 0.532479 | 7_2:-83537245 | None:intergenic |
| TAGTTGGCTCATTCAATTGG+AGG | 0.533513 | 7_2:+83537600 | Msa1083250:CDS |
| ATCCAGATCCGGGATGGAAG+TGG | 0.540621 | 7_2:-83537567 | None:intergenic |
| ATTATGGCAGGTATTGTCAC+AGG | 0.543582 | 7_2:-83540222 | None:intergenic |
| ACGCGGTTCCTCAAAATACA+TGG | 0.548149 | 7_2:+83537805 | Msa1083250:CDS |
| CTTGAAGACCAGATTATGGC+AGG | 0.552753 | 7_2:-83540234 | None:intergenic |
| ACATTGAGGAATCTCTTTGG+AGG | 0.553002 | 7_2:+83538964 | Msa1083250:CDS |
| TTTGCACCAGATCCAGATCC+GGG | 0.553031 | 7_2:-83537577 | None:intergenic |
| TGTGATGGGGCGTCTTTCAG+TGG | 0.553061 | 7_2:+83538008 | Msa1083250:CDS |
| AATAGATGCTTGATATAATG+AGG | 0.553366 | 7_2:+83542000 | Msa1083250:three_prime_UTR |
| GAGTATAGGCACTATCATGT+TGG | 0.555826 | 7_2:-83542114 | None:intergenic |
| TGCATACCATGTTGTTAAGG+AGG | 0.557052 | 7_2:-83539861 | None:intergenic |
| GACACAGAATCTCTCACCTC+GGG | 0.557126 | 7_2:+83537157 | Msa1083250:CDS |
| GCATACCATGTTGTTAAGGA+GGG | 0.557350 | 7_2:-83539860 | None:intergenic |
| ATCCCACTCACTCTTATCCA+TGG | 0.557640 | 7_2:+83537260 | Msa1083250:CDS |
| CACCAGATCCAGATCCGGGA+TGG | 0.559180 | 7_2:-83537573 | None:intergenic |
| TAAAAGTCAACCTTGTGGAG+CGG | 0.562003 | 7_2:-83541715 | None:intergenic |
| TGTTTGTCAGTATGTTTGGA+TGG | 0.563064 | 7_2:+83537529 | Msa1083250:intron |
| AAATTACCGAAGTTGGGTCC+AGG | 0.563109 | 7_2:-83539171 | None:intergenic |
| CCGCATTCAGCAGATCCTCA+TGG | 0.567304 | 7_2:+83539542 | Msa1083250:CDS |
| TGCTATATTCCCGCTCCACA+AGG | 0.567311 | 7_2:+83541705 | Msa1083250:CDS |
| CAGTGTTGGTAAATCTGCCA+TGG | 0.575081 | 7_2:+83541552 | Msa1083250:intron |
| TGCAGCTTATGATGCATGGC+AGG | 0.576179 | 7_2:+83539331 | Msa1083250:CDS |
| ATGTATCTTGTCTCTCCGAT+TGG | 0.579548 | 7_2:-83539819 | None:intergenic |
| ATTGAAGAATTAATGTCGAA+GGG | 0.581479 | 7_2:+83538615 | Msa1083250:CDS |
| TAACCACCTGGACCCAACTT+CGG | 0.583326 | 7_2:+83539165 | Msa1083250:CDS |
| ATAAGAGGTTGAGGCAGCAG+GGG | 0.585204 | 7_2:-83537236 | None:intergenic |
| CTCTCCCCTCCTTAACAACA+TGG | 0.586154 | 7_2:+83539855 | Msa1083250:CDS |
| AATTGAAGAATTAATGTCGA+AGG | 0.586251 | 7_2:+83538614 | Msa1083250:CDS |
| AGAATATTTCCATTCCAACC+TGG | 0.593642 | 7_2:-83541930 | None:intergenic |
| CTAGTGAAAGTATGCCAGGT+TGG | 0.594005 | 7_2:+83541916 | Msa1083250:three_prime_UTR |
| TTATCTGGATGCTCTGCGGG+TGG | 0.594030 | 7_2:+83538738 | Msa1083250:CDS |
| CTGATGCTGTAGCCTGTAGG+TGG | 0.594319 | 7_2:+83541968 | Msa1083250:three_prime_UTR |
| CCATGAGGATCTGCTGAATG+CGG | 0.598787 | 7_2:-83539542 | None:intergenic |
| ATTCTGATGCTGTAGCCTGT+AGG | 0.603970 | 7_2:+83541965 | Msa1083250:three_prime_UTR |
| GTCAAAGTGAGGTACTGTGA+TGG | 0.606987 | 7_2:+83537993 | Msa1083250:CDS |
| TGAATGCAGCTTATGATGCA+TGG | 0.609693 | 7_2:+83539327 | Msa1083250:CDS |
| TGTGGAGCGGGAATATAGCA+TGG | 0.616004 | 7_2:-83541702 | None:intergenic |
| ATTACATGCTCATAATACAC+TGG | 0.616690 | 7_2:+83541773 | Msa1083250:exon |
| GATGAACGCATAGCTGCCAA+TGG | 0.622713 | 7_2:-83537209 | None:intergenic |
| TTAAAATTCGAATTACACAA+TGG | 0.623052 | 7_2:+83541801 | Msa1083250:three_prime_UTR |
| CGGGAATATAGCATGGAGGT+AGG | 0.623170 | 7_2:-83541695 | None:intergenic |
| CATACCATGTTGTTAAGGAG+GGG | 0.624484 | 7_2:-83539859 | None:intergenic |
| CTCCATGGATAAGAGTGAGT+GGG | 0.625974 | 7_2:-83537262 | None:intergenic |
| TGACACGAGAAAATAAAGAT+CGG | 0.626389 | 7_2:+83536955 | Msa1083250:five_prime_UTR |
| ATGAGGATCTGCTGAATGCG+GGG | 0.632595 | 7_2:-83539540 | None:intergenic |
| GGGAATGAAGAACGCCAACA+AGG | 0.633094 | 7_2:+83538635 | Msa1083250:CDS |
| AATCGGAGAGACAAGATACA+TGG | 0.638574 | 7_2:+83539821 | Msa1083250:CDS |
| GCTCCATGGATAAGAGTGAG+TGG | 0.639842 | 7_2:-83537263 | None:intergenic |
| CACTCACACTCTCCAATGTG+TGG | 0.642543 | 7_2:-83536998 | None:intergenic |
| ATGTAGAACTGATATATCTG+GGG | 0.646188 | 7_2:+83538936 | Msa1083250:intron |
| CAAAGTGAGGTACTGTGATG+GGG | 0.646787 | 7_2:+83537995 | Msa1083250:CDS |
| CAAATGCTAAATGACATCAA+AGG | 0.647217 | 7_2:+83539742 | Msa1083250:CDS |
| AGACACAGAATCTCTCACCT+CGG | 0.647432 | 7_2:+83537156 | Msa1083250:CDS |
| TGTAGAACTGATATATCTGG+GGG | 0.648311 | 7_2:+83538937 | Msa1083250:intron |
| GCTGCATTCAGCAGAAACAG+TGG | 0.652873 | 7_2:-83539314 | None:intergenic |
| AAAGATCCAGTACCACACAT+TGG | 0.653893 | 7_2:+83536986 | Msa1083250:five_prime_UTR |
| CAATTATTCCAAGATCCATG+AGG | 0.680551 | 7_2:-83539557 | None:intergenic |
| TTACCGAAGTTGGGTCCAGG+TGG | 0.682863 | 7_2:-83539168 | None:intergenic |
| CAGTGGAGACAGTCAAAACG+AGG | 0.693681 | 7_2:+83538025 | Msa1083250:CDS |
| GCAATGATGCTATGTACAAG+TGG | 0.693869 | 7_2:+83542047 | Msa1083250:three_prime_UTR |
| ACTGGAACAGAGTCAAAGTG+AGG | 0.697951 | 7_2:+83537982 | Msa1083250:CDS |
| TGGTAGACTCTCAATCCACA+AGG | 0.698984 | 7_2:+83541572 | Msa1083250:CDS |
| AGCACTAAAAGTCAACCTTG+TGG | 0.700041 | 7_2:-83541720 | None:intergenic |
| TTATGGCAGGTATTGTCACA+GGG | 0.713971 | 7_2:-83540221 | None:intergenic |
| GATCTCGTGAGATCTAACTG+AGG | 0.728818 | 7_2:-83537129 | None:intergenic |
| TGTGGATTGAGAGTCTACCA+TGG | 0.760817 | 7_2:-83541569 | None:intergenic |
| GTAGAACTGATATATCTGGG+GGG | 0.773485 | 7_2:+83538938 | Msa1083250:intron |
| GGAGCGGGAATATAGCATGG+AGG | 0.783882 | 7_2:-83541699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTAGTTAAATTATTCTT+TGG | + | chr7_2:83538149-83538168 | Msa1083250:intron | 15.0% |
| !! | TTGTTATAGAAAAACATTAT+TGG | + | chr7_2:83540343-83540362 | Msa1083250:intron | 15.0% |
| !! | TTGCTTTAATAAAATTTCTT+TGG | + | chr7_2:83540411-83540430 | Msa1083250:intron | 15.0% |
| !!! | TAAAAGTATAATATCTTCAA+GGG | - | chr7_2:83540469-83540488 | None:intergenic | 15.0% |
| !!! | ATAAAAGTATAATATCTTCA+AGG | - | chr7_2:83540470-83540489 | None:intergenic | 15.0% |
| !! | AAGTTAATAAAATGATAGAT+TGG | + | chr7_2:83540564-83540583 | Msa1083250:intron | 15.0% |
| !!! | GTTATGTGTTATAATTTTTG+TGG | + | chr7_2:83537930-83537949 | Msa1083250:intron | 20.0% |
| !!! | TTTTTCCAATTTTTGTTAAG+AGG | + | chr7_2:83538077-83538096 | Msa1083250:intron | 20.0% |
| !! | AAAATCCTCTTAACAAAAAT+TGG | - | chr7_2:83538085-83538104 | None:intergenic | 20.0% |
| !! | TGTATGTCAATGATAATAAT+AGG | - | chr7_2:83538112-83538131 | None:intergenic | 20.0% |
| !!! | AATTATTCTTTGGAAATTTG+TGG | + | chr7_2:83538159-83538178 | Msa1083250:intron | 20.0% |
| !!! | AAATCTCTTTTCTAATGAAT+GGG | + | chr7_2:83538479-83538498 | Msa1083250:intron | 20.0% |
| !!! | TGCTAATGATTTTTTTTTTC+AGG | + | chr7_2:83538710-83538729 | Msa1083250:intron | 20.0% |
| !! | ACAAGAATTTATGAATAATC+CGG | - | chr7_2:83539788-83539807 | None:intergenic | 20.0% |
| !! | TAGAGACTAAAAATTATTTG+TGG | + | chr7_2:83539998-83540017 | Msa1083250:intron | 20.0% |
| !!! | CATTTTATTAACTTGAAAAG+TGG | - | chr7_2:83540558-83540577 | None:intergenic | 20.0% |
| !! | TCAATCTATCAAATATGATT+TGG | + | chr7_2:83540797-83540816 | Msa1083250:intron | 20.0% |
| !! | TAAATTCATCATTACAAAAC+TGG | + | chr7_2:83541352-83541371 | Msa1083250:intron | 20.0% |
| !! | TTAAAATTCGAATTACACAA+TGG | + | chr7_2:83541801-83541820 | Msa1083250:three_prime_UTR | 20.0% |
| ! | TACATATGCAATAACATGAT+AGG | - | chr7_2:83537346-83537365 | None:intergenic | 25.0% |
| ! | ATAATGTTTGTCAGTATGTT+TGG | + | chr7_2:83537525-83537544 | Msa1083250:intron | 25.0% |
| !!! | ATGTTCAAGTATTTTGATCA+TGG | + | chr7_2:83537624-83537643 | Msa1083250:intron | 25.0% |
| !! | TGTTTGAAAACTTTTCTTCA+GGG | + | chr7_2:83537731-83537750 | Msa1083250:intron | 25.0% |
| !!! | TTGTTTTTCCATGTATTTTG+AGG | - | chr7_2:83537816-83537835 | None:intergenic | 25.0% |
| !! | AAAAAACACCATTCATTTTG+CGG | + | chr7_2:83538186-83538205 | Msa1083250:intron | 25.0% |
| !!! | TTTATTAGTCTTTGCTAGTA+TGG | + | chr7_2:83538453-83538472 | Msa1083250:intron | 25.0% |
| !! | GAAATCTCTTTTCTAATGAA+TGG | + | chr7_2:83538478-83538497 | Msa1083250:intron | 25.0% |
| ! | AATTTAGAGGACAGAAAATA+TGG | + | chr7_2:83538583-83538602 | Msa1083250:CDS | 25.0% |
| ! | AATTGAAGAATTAATGTCGA+AGG | + | chr7_2:83538614-83538633 | Msa1083250:CDS | 25.0% |
| ! | ATTGAAGAATTAATGTCGAA+GGG | + | chr7_2:83538615-83538634 | Msa1083250:CDS | 25.0% |
| ! | AAAATTACGACATTCCAATA+TGG | - | chr7_2:83538665-83538684 | None:intergenic | 25.0% |
| ! | AAAAAAATCATTAGCATCCA+TGG | - | chr7_2:83538706-83538725 | None:intergenic | 25.0% |
| ! | ACAATTATATCCAAGTTTAC+AGG | - | chr7_2:83538902-83538921 | None:intergenic | 25.0% |
| !! | ATACAAGTTTTCTAACAGAA+AGG | - | chr7_2:83539077-83539096 | None:intergenic | 25.0% |
| !! | AATCTTTTCCTCTTCTATTT+CGG | + | chr7_2:83539945-83539964 | Msa1083250:intron | 25.0% |
| !! | TTCTGAGAACAATAAAGAAA+GGG | - | chr7_2:83540094-83540113 | None:intergenic | 25.0% |
| !! | TTTCTGAGAACAATAAAGAA+AGG | - | chr7_2:83540095-83540114 | None:intergenic | 25.0% |
| ! | ATCAAAAAACCAATTTCCAA+CGG | - | chr7_2:83540168-83540187 | None:intergenic | 25.0% |
| !! | TAGAAAAACATTATTGGCTA+AGG | + | chr7_2:83540349-83540368 | Msa1083250:intron | 25.0% |
| ! | GGTCTATTATATTCACTTAT+AGG | + | chr7_2:83540388-83540407 | Msa1083250:intron | 25.0% |
| !! | ATCCAATTATAATTTTCCCA+AGG | + | chr7_2:83540488-83540507 | Msa1083250:intron | 25.0% |
| ! | TTTGAGTCATTACAATTCAT+TGG | + | chr7_2:83540700-83540719 | Msa1083250:intron | 25.0% |
| ! | TGGAATGATTACATTTGAAA+TGG | + | chr7_2:83540747-83540766 | Msa1083250:intron | 25.0% |
| !!! | CTTTTGTTTATATTTGAGTC+CGG | + | chr7_2:83540820-83540839 | Msa1083250:intron | 25.0% |
| !!! | GGGTTGATTTTAAGATTTAA+GGG | - | chr7_2:83540947-83540966 | None:intergenic | 25.0% |
| !!! | TGGGTTGATTTTAAGATTTA+AGG | - | chr7_2:83540948-83540967 | None:intergenic | 25.0% |
| ! | TTAAAATCAACCCAATATTC+AGG | + | chr7_2:83540954-83540973 | Msa1083250:intron | 25.0% |
| ! | TGAATTAGAGAAAAGAAAGA+AGG | - | chr7_2:83541497-83541516 | None:intergenic | 25.0% |
| !!! | TAAGAATTTTAGTTCCATCA+TGG | - | chr7_2:83541649-83541668 | None:intergenic | 25.0% |
| ! | AATAGATGCTTGATATAATG+AGG | + | chr7_2:83542000-83542019 | Msa1083250:three_prime_UTR | 25.0% |
| !! | CAGTAGTAAAATAAGAGTAT+AGG | - | chr7_2:83542131-83542150 | None:intergenic | 25.0% |
| !!! | ACGATTGATTTGTTAATCAA+TGG | + | chr7_2:83542242-83542261 | Msa1083250:three_prime_UTR | 25.0% |
| TGACACGAGAAAATAAAGAT+CGG | + | chr7_2:83536955-83536974 | Msa1083250:five_prime_UTR | 30.0% | |
| TACTCTCATTACTCGATATA+AGG | + | chr7_2:83537314-83537333 | Msa1083250:intron | 30.0% | |
| ACTCTCATTACTCGATATAA+GGG | + | chr7_2:83537315-83537334 | Msa1083250:intron | 30.0% | |
| AATTATATCCATCCTACTCA+GGG | - | chr7_2:83537393-83537412 | None:intergenic | 30.0% | |
| TAATTATATCCATCCTACTC+AGG | - | chr7_2:83537394-83537413 | None:intergenic | 30.0% | |
| ACATGAAATAGCCTAAACAA+AGG | - | chr7_2:83537430-83537449 | None:intergenic | 30.0% | |
| TTTCATGTCTTCACTATTCA+TGG | + | chr7_2:83537442-83537461 | Msa1083250:intron | 30.0% | |
| ! | ACCTAGTATTTTGTCTCAAA+TGG | + | chr7_2:83537474-83537493 | Msa1083250:intron | 30.0% |
| ! | TCCATTTGAGACAAAATACT+AGG | - | chr7_2:83537478-83537497 | None:intergenic | 30.0% |
| ! | AAATAGTTGGCTCATTCAAT+TGG | + | chr7_2:83537597-83537616 | Msa1083250:CDS | 30.0% |
| !!! | AGTATTTTGATCATGGATCT+CGG | + | chr7_2:83537631-83537650 | Msa1083250:intron | 30.0% |
| ! | CTGAAGAAAAGTTTTCAAAC+AGG | - | chr7_2:83537732-83537751 | None:intergenic | 30.0% |
| ! | CTGTTTGAAAACTTTTCTTC+AGG | + | chr7_2:83537730-83537749 | Msa1083250:intron | 30.0% |
| AATAAAGCTGAAGAAAATCC+TGG | + | chr7_2:83537860-83537879 | Msa1083250:CDS | 30.0% | |
| !!! | TGTGCACAGATTTTTTTAAC+TGG | + | chr7_2:83537964-83537983 | Msa1083250:intron | 30.0% |
| ! | GCAAATGTACATTTTTCTTG+TGG | + | chr7_2:83538375-83538394 | Msa1083250:intron | 30.0% |
| GTATGAATTCACAAGTCAAT+TGG | - | chr7_2:83538541-83538560 | None:intergenic | 30.0% | |
| TATTCAATCATAGATGTCCA+TGG | + | chr7_2:83538686-83538705 | Msa1083250:intron | 30.0% | |
| !!! | TTTTTTCAGGCTCTTTTATC+TGG | + | chr7_2:83538723-83538742 | Msa1083250:intron | 30.0% |
| !! | TAGATTTTGGAAACAAGCTT+TGG | - | chr7_2:83538794-83538813 | None:intergenic | 30.0% |
| ! | CATTTCACTTTGGTAGATTT+TGG | - | chr7_2:83538807-83538826 | None:intergenic | 30.0% |
| ATCACTCAAACATTTCACTT+TGG | - | chr7_2:83538817-83538836 | None:intergenic | 30.0% | |
| TCATGTAGAACTGATATATC+TGG | + | chr7_2:83538934-83538953 | Msa1083250:intron | 30.0% | |
| CATGTAGAACTGATATATCT+GGG | + | chr7_2:83538935-83538954 | Msa1083250:intron | 30.0% | |
| ATGTAGAACTGATATATCTG+GGG | + | chr7_2:83538936-83538955 | Msa1083250:intron | 30.0% | |
| !! | ATTGACGTCTTTGAAATTGT+AGG | + | chr7_2:83539111-83539130 | Msa1083250:intron | 30.0% |
| ATCAGAAAATTACCGAAGTT+GGG | - | chr7_2:83539180-83539199 | None:intergenic | 30.0% | |
| AATCAGAAAATTACCGAAGT+TGG | - | chr7_2:83539181-83539200 | None:intergenic | 30.0% | |
| ! | ACATGATCGATCAAATTTTG+AGG | - | chr7_2:83539287-83539306 | None:intergenic | 30.0% |
| !! | AGAGAGTGTCAAAATTACTT+TGG | - | chr7_2:83539628-83539647 | None:intergenic | 30.0% |
| CAAATGCTAAATGACATCAA+AGG | + | chr7_2:83539742-83539761 | Msa1083250:CDS | 30.0% | |
| !! | ACTGTACTATTTTAGAAGCA+CGG | - | chr7_2:83539900-83539919 | None:intergenic | 30.0% |
| !! | TGCTTCTAAAATAGTACAGT+TGG | + | chr7_2:83539900-83539919 | Msa1083250:intron | 30.0% |
| CAAAGTTATTGTCTTTCGTA+CGG | + | chr7_2:83540262-83540281 | Msa1083250:intron | 30.0% | |
| ! | TAATGCAGACTCAGTAATTT+TGG | - | chr7_2:83540446-83540465 | None:intergenic | 30.0% |
| GTCCTTGGGAAAATTATAAT+TGG | - | chr7_2:83540493-83540512 | None:intergenic | 30.0% | |
| AAGTGGTGCAATTAAAAAGA+AGG | - | chr7_2:83540541-83540560 | None:intergenic | 30.0% | |
| GAGTCAATCTAGATTTCATA+AGG | + | chr7_2:83540601-83540620 | Msa1083250:intron | 30.0% | |
| TGACTCAAATGATCGATAAA+AGG | - | chr7_2:83540689-83540708 | None:intergenic | 30.0% | |
| ATTCCAAAAATACCCTTTCA+CGG | - | chr7_2:83540733-83540752 | None:intergenic | 30.0% | |
| TAAGGGATCATGATACAATA+GGG | - | chr7_2:83540930-83540949 | None:intergenic | 30.0% | |
| TTAAGGGATCATGATACAAT+AGG | - | chr7_2:83540931-83540950 | None:intergenic | 30.0% | |
| ATGTTGGATTGTATTGGAAT+AGG | + | chr7_2:83541083-83541102 | Msa1083250:intron | 30.0% | |
| ! | AAATCATTTACTGATGGATG+TGG | - | chr7_2:83541132-83541151 | None:intergenic | 30.0% |
| ACATCCATCAGTAAATGATT+TGG | + | chr7_2:83541131-83541150 | Msa1083250:intron | 30.0% | |
| !! | AATTTGTTGAGTGACTTGAA+TGG | + | chr7_2:83541163-83541182 | Msa1083250:intron | 30.0% |
| TAACTATCCAGTGTTCTATA+AGG | - | chr7_2:83541217-83541236 | None:intergenic | 30.0% | |
| CCTAATATCACAACTTAAGA+TGG | - | chr7_2:83541331-83541350 | None:intergenic | 30.0% | |
| ! | CCATCTTAAGTTGTGATATT+AGG | + | chr7_2:83541328-83541347 | Msa1083250:intron | 30.0% |
| TTCTTAAAATGAGACGATGT+AGG | - | chr7_2:83541460-83541479 | None:intergenic | 30.0% | |
| AAGAAAGAAGGTGAAATTTC+TGG | - | chr7_2:83541485-83541504 | None:intergenic | 30.0% | |
| GGAAATAAAAATGGAAGGAA+GGG | - | chr7_2:83541613-83541632 | None:intergenic | 30.0% | |
| AGATGGGAAATAAAAATGGA+AGG | - | chr7_2:83541618-83541637 | None:intergenic | 30.0% | |
| GTGTATTATGAGCATGTAAT+TGG | - | chr7_2:83541773-83541792 | None:intergenic | 30.0% | |
| ATTACATGCTCATAATACAC+TGG | + | chr7_2:83541773-83541792 | Msa1083250:exon | 30.0% | |
| GAGAATCAAGTGAGTATTAT+GGG | - | chr7_2:83542268-83542287 | None:intergenic | 30.0% | |
| TGAGAATCAAGTGAGTATTA+TGG | - | chr7_2:83542269-83542288 | None:intergenic | 30.0% | |
| ! | ATAGTGTGTGTCCTTTGTTT+AGG | + | chr7_2:83537416-83537435 | Msa1083250:intron | 35.0% |
| TGTTTGTCAGTATGTTTGGA+TGG | + | chr7_2:83537529-83537548 | Msa1083250:intron | 35.0% | |
| ! | TTGAAAACTTTTCTTCAGGG+AGG | + | chr7_2:83537734-83537753 | Msa1083250:intron | 35.0% |
| TCTAAAGACACAACTTCTGA+TGG | - | chr7_2:83537774-83537793 | None:intergenic | 35.0% | |
| TTTAGAAAAACTACTCGACG+CGG | + | chr7_2:83537788-83537807 | Msa1083250:CDS | 35.0% | |
| GAAAAACAACTACCATTCAC+TGG | + | chr7_2:83537827-83537846 | Msa1083250:CDS | 35.0% | |
| TTGCTCAATAATCCAGTGAA+TGG | - | chr7_2:83537842-83537861 | None:intergenic | 35.0% | |
| GCAGATTTCAGTACACATAT+GGG | - | chr7_2:83537908-83537927 | None:intergenic | 35.0% | |
| AGAGGTAAAACTATGGTTGT+TGG | + | chr7_2:83538251-83538270 | Msa1083250:intron | 35.0% | |
| GTTGGATTACTCTATTATCC+TGG | + | chr7_2:83538269-83538288 | Msa1083250:intron | 35.0% | |
| ! | CAAACATGATTTGTATGACC+AGG | - | chr7_2:83538290-83538309 | None:intergenic | 35.0% |
| ! | ATGTACATTTTTCTTGTGGC+AGG | + | chr7_2:83538379-83538398 | Msa1083250:intron | 35.0% |
| !! | ATTAGTCTTTGCTAGTATGG+AGG | + | chr7_2:83538456-83538475 | Msa1083250:intron | 35.0% |
| TCCAATATGGAAAACCTTGT+TGG | - | chr7_2:83538652-83538671 | None:intergenic | 35.0% | |
| TGTAGAACTGATATATCTGG+GGG | + | chr7_2:83538937-83538956 | Msa1083250:intron | 35.0% | |
| ! | AGGTGGTTAAGACAACTTTT+TGG | - | chr7_2:83539154-83539173 | None:intergenic | 35.0% |
| AAAAAGTTGTCTTAACCACC+TGG | + | chr7_2:83539153-83539172 | Msa1083250:CDS | 35.0% | |
| GTTGGTTAAACTAGAAGCTA+TGG | - | chr7_2:83539457-83539476 | None:intergenic | 35.0% | |
| !! | TAGCTTCTAGTTTAACCAAC+TGG | + | chr7_2:83539457-83539476 | Msa1083250:intron | 35.0% |
| TATATACCACAAACACCAGT+TGG | - | chr7_2:83539475-83539494 | None:intergenic | 35.0% | |
| CAATTATTCCAAGATCCATG+AGG | - | chr7_2:83539560-83539579 | None:intergenic | 35.0% | |
| ! | ACTTTGGAGGATCTGAATTT+GGG | - | chr7_2:83539612-83539631 | None:intergenic | 35.0% |
| ! | TACTTTGGAGGATCTGAATT+TGG | - | chr7_2:83539613-83539632 | None:intergenic | 35.0% |
| GAGTGTCAAAATTACTTTGG+AGG | - | chr7_2:83539625-83539644 | None:intergenic | 35.0% | |
| ! | TTTTCAACGACTTCTCAATC+CGG | + | chr7_2:83539766-83539785 | Msa1083250:CDS | 35.0% |
| !! | TTGTTTTGCTCATTGCCAAT+CGG | + | chr7_2:83539804-83539823 | Msa1083250:CDS | 35.0% |
| TCATGCATACCATGTTGTTA+AGG | - | chr7_2:83539867-83539886 | None:intergenic | 35.0% | |
| ! | CCAATTTTCCGAAATAGAAG+AGG | - | chr7_2:83539956-83539975 | None:intergenic | 35.0% |
| CCTCTTCTATTTCGGAAAAT+TGG | + | chr7_2:83539953-83539972 | Msa1083250:intron | 35.0% | |
| GGAAATACTGAGAGAGATAA+TGG | + | chr7_2:83539974-83539993 | Msa1083250:intron | 35.0% | |
| AGAACAATAAAGAAAGGGAG+AGG | - | chr7_2:83540089-83540108 | None:intergenic | 35.0% | |
| TAAGGCCATTACAACTCTTT+GGG | + | chr7_2:83540367-83540386 | Msa1083250:intron | 35.0% | |
| ATAGACCCAAAGAGTTGTAA+TGG | - | chr7_2:83540375-83540394 | None:intergenic | 35.0% | |
| ! | GTACTGAAAGCATGAATCAA+TGG | + | chr7_2:83540896-83540915 | Msa1083250:intron | 35.0% |
| AAGGGATCATGATACAATAG+GGG | - | chr7_2:83540929-83540948 | None:intergenic | 35.0% | |
| GAAACAGTGGATAGTTAAAG+AGG | + | chr7_2:83541044-83541063 | Msa1083250:intron | 35.0% | |
| AGTTAAAGAGGTCATGTGTT+TGG | + | chr7_2:83541056-83541075 | Msa1083250:intron | 35.0% | |
| ! | TCATGTGTTTGGTTTCATGT+TGG | + | chr7_2:83541067-83541086 | Msa1083250:intron | 35.0% |
| GGTTTCATGTTGGATTGTAT+TGG | + | chr7_2:83541077-83541096 | Msa1083250:intron | 35.0% | |
| CACACCAAATCATTTACTGA+TGG | - | chr7_2:83541138-83541157 | None:intergenic | 35.0% | |
| !! | TCAGTAAATGATTTGGTGTG+TGG | + | chr7_2:83541138-83541157 | Msa1083250:intron | 35.0% |
| AGTTCATCCTTATAGAACAC+TGG | + | chr7_2:83541207-83541226 | Msa1083250:intron | 35.0% | |
| GTGTTTGGTATCATGTTGAA+TGG | + | chr7_2:83541248-83541267 | Msa1083250:intron | 35.0% | |
| GTATCATGTTGAATGGCATT+GGG | + | chr7_2:83541255-83541274 | Msa1083250:intron | 35.0% | |
| ! | ATTTTCGTGCTTTACAGTGT+TGG | + | chr7_2:83541538-83541557 | Msa1083250:intron | 35.0% |
| TAAGGTAAATGTCAACCTTG+TGG | - | chr7_2:83541590-83541609 | None:intergenic | 35.0% | |
| TAAAAATGGAAGGAAGGGTA+AGG | - | chr7_2:83541608-83541627 | None:intergenic | 35.0% | |
| GGGAAATAAAAATGGAAGGA+AGG | - | chr7_2:83541614-83541633 | None:intergenic | 35.0% | |
| GCGAAGATGGGAAATAAAAA+TGG | - | chr7_2:83541622-83541641 | None:intergenic | 35.0% | |
| TAGGAATATCATCACTGCAA+AGG | - | chr7_2:83541679-83541698 | None:intergenic | 35.0% | |
| GCTTGAAGTTACAAGATTCA+AGG | + | chr7_2:83541862-83541881 | Msa1083250:three_prime_UTR | 35.0% | |
| AGAATATTTCCATTCCAACC+TGG | - | chr7_2:83541933-83541952 | None:intergenic | 35.0% | |
| GGAAATATTCTCTATGCTAC+AGG | + | chr7_2:83541942-83541961 | Msa1083250:three_prime_UTR | 35.0% | |
| GATATAATGAGGCCATTAGA+TGG | + | chr7_2:83542011-83542030 | Msa1083250:three_prime_UTR | 35.0% | |
| ! | CCAATTTGTTCTCCATCTAA+TGG | - | chr7_2:83542026-83542045 | None:intergenic | 35.0% |
| CCATTAGATGGAGAACAAAT+TGG | + | chr7_2:83542023-83542042 | Msa1083250:three_prime_UTR | 35.0% | |
| AGTATAGGCACTATCATGTT+GGG | - | chr7_2:83542116-83542135 | None:intergenic | 35.0% | |
| AAAGATCCAGTACCACACAT+TGG | + | chr7_2:83536986-83537005 | Msa1083250:five_prime_UTR | 40.0% | |
| TTCTTCTCATTTCTCAGCAC+AGG | - | chr7_2:83537058-83537077 | None:intergenic | 40.0% | |
| ! | ATCCATGGAGCTGATTCTAA+AGG | + | chr7_2:83537275-83537294 | Msa1083250:CDS | 40.0% |
| TGTCTTCACTATTCATGGTG+TGG | + | chr7_2:83537447-83537466 | Msa1083250:intron | 40.0% | |
| TGTTTGGATGGAACTTTACC+TGG | + | chr7_2:83537541-83537560 | Msa1083250:CDS | 40.0% | |
| ! | TAGTTGGCTCATTCAATTGG+AGG | + | chr7_2:83537600-83537619 | Msa1083250:CDS | 40.0% |
| ! | AAAACTTTTCTTCAGGGAGG+AGG | + | chr7_2:83537737-83537756 | Msa1083250:intron | 40.0% |
| AGGGTAAAAGGGAAAAAACC+AGG | - | chr7_2:83537881-83537900 | None:intergenic | 40.0% | |
| ATATGGGTGGAAGGGTAAAA+GGG | - | chr7_2:83537892-83537911 | None:intergenic | 40.0% | |
| GATTTCAGTACACATATGGG+TGG | - | chr7_2:83537905-83537924 | None:intergenic | 40.0% | |
| CGCAGATTTCAGTACACATA+TGG | - | chr7_2:83537909-83537928 | None:intergenic | 40.0% | |
| !! | TCAAAGTGAGGTACTGTGAT+GGG | + | chr7_2:83537994-83538013 | Msa1083250:CDS | 40.0% |
| GAATCATGCCGCAAAATGAA+TGG | - | chr7_2:83538197-83538216 | None:intergenic | 40.0% | |
| ! | TTTTTCTTGTGGCAGGAAGA+AGG | + | chr7_2:83538386-83538405 | Msa1083250:intron | 40.0% |
| ! | TGAATGGGCTCTTCTTAAGA+AGG | + | chr7_2:83538494-83538513 | Msa1083250:intron | 40.0% |
| TGTGAATTCATACCCCTTTC+AGG | + | chr7_2:83538548-83538567 | Msa1083250:intron | 40.0% | |
| ! | GCCAACAAGGTTTTCCATAT+TGG | + | chr7_2:83538648-83538667 | Msa1083250:intron | 40.0% |
| ! | TCTTTTATCTGGATGCTCTG+CGG | + | chr7_2:83538734-83538753 | Msa1083250:CDS | 40.0% |
| GTGAAATGTTTGAGTGATGC+TGG | + | chr7_2:83538819-83538838 | Msa1083250:CDS | 40.0% | |
| AAGTTTACAGGCAATGATGC+AGG | - | chr7_2:83538890-83538909 | None:intergenic | 40.0% | |
| TGCATCATTGCCTGTAAACT+TGG | + | chr7_2:83538889-83538908 | Msa1083250:intron | 40.0% | |
| GTAGAACTGATATATCTGGG+GGG | + | chr7_2:83538938-83538957 | Msa1083250:intron | 40.0% | |
| CACACATTGAGGAATCTCTT+TGG | + | chr7_2:83538961-83538980 | Msa1083250:CDS | 40.0% | |
| ACATTGAGGAATCTCTTTGG+AGG | + | chr7_2:83538964-83538983 | Msa1083250:CDS | 40.0% | |
| GCAATGAAATCTTCTGTCAG+TGG | + | chr7_2:83539046-83539065 | Msa1083250:intron | 40.0% | |
| TGAATGCAGCTTATGATGCA+TGG | + | chr7_2:83539327-83539346 | Msa1083250:CDS | 40.0% | |
| ! | TTTGTGTCCTCAAAGTGCTA+TGG | + | chr7_2:83539423-83539442 | Msa1083250:intron | 40.0% |
| ATCCATACCATAGCACTTTG+AGG | - | chr7_2:83539433-83539452 | None:intergenic | 40.0% | |
| GTTTAACCAACTGGTGTTTG+TGG | + | chr7_2:83539466-83539485 | Msa1083250:intron | 40.0% | |
| ATGTATCTTGTCTCTCCGAT+TGG | - | chr7_2:83539822-83539841 | None:intergenic | 40.0% | |
| AATCGGAGAGACAAGATACA+TGG | + | chr7_2:83539821-83539840 | Msa1083250:CDS | 40.0% | |
| CATACCATGTTGTTAAGGAG+GGG | - | chr7_2:83539862-83539881 | None:intergenic | 40.0% | |
| GCATACCATGTTGTTAAGGA+GGG | - | chr7_2:83539863-83539882 | None:intergenic | 40.0% | |
| TGCATACCATGTTGTTAAGG+AGG | - | chr7_2:83539864-83539883 | None:intergenic | 40.0% | |
| GAGAGCTTTCATCATAGCAA+AGG | - | chr7_2:83540029-83540048 | None:intergenic | 40.0% | |
| ! | TTATGGCAGGTATTGTCACA+GGG | - | chr7_2:83540224-83540243 | None:intergenic | 40.0% |
| ! | ATTATGGCAGGTATTGTCAC+AGG | - | chr7_2:83540225-83540244 | None:intergenic | 40.0% |
| TGACAATACCTGCCATAATC+TGG | + | chr7_2:83540226-83540245 | Msa1083250:CDS | 40.0% | |
| CTCACTTGAAGACCAGATTA+TGG | - | chr7_2:83540241-83540260 | None:intergenic | 40.0% | |
| CTAAGGCCATTACAACTCTT+TGG | + | chr7_2:83540366-83540385 | Msa1083250:intron | 40.0% | |
| ATTGGTAGAACTCCGTGAAA+GGG | + | chr7_2:83540718-83540737 | Msa1083250:intron | 40.0% | |
| !!! | ACTCCGTGAAAGGGTATTTT+TGG | + | chr7_2:83540727-83540746 | Msa1083250:intron | 40.0% |
| AGGTTGAAGTTGAACTACTG+TGG | + | chr7_2:83540868-83540887 | Msa1083250:intron | 40.0% | |
| AGGGATCATGATACAATAGG+GGG | - | chr7_2:83540928-83540947 | None:intergenic | 40.0% | |
| GAACTTCTGGCCTGAATATT+GGG | - | chr7_2:83540967-83540986 | None:intergenic | 40.0% | |
| ATGTGGATGGATGTATTCAG+AGG | - | chr7_2:83541115-83541134 | None:intergenic | 40.0% | |
| ! | CATTTACTGATGGATGTGGA+TGG | - | chr7_2:83541128-83541147 | None:intergenic | 40.0% |
| GTTGAGTGACTTGAATGGAT+AGG | + | chr7_2:83541168-83541187 | Msa1083250:intron | 40.0% | |
| CACTGGATAGTTAAGAGAGT+TGG | + | chr7_2:83541224-83541243 | Msa1083250:intron | 40.0% | |
| !! | GTTAAGAGAGTTGGTGTGTT+TGG | + | chr7_2:83541233-83541252 | Msa1083250:intron | 40.0% |
| GGTATCATGTTGAATGGCAT+TGG | + | chr7_2:83541254-83541273 | Msa1083250:intron | 40.0% | |
| ! | ATGTTGAATGGCATTGGGTT+TGG | + | chr7_2:83541260-83541279 | Msa1083250:intron | 40.0% |
| !! | GGTTTGGTGTCTGGATAATT+TGG | + | chr7_2:83541276-83541295 | Msa1083250:intron | 40.0% |
| ! | TTGGTGTCTGGATAATTTGG+TGG | + | chr7_2:83541279-83541298 | Msa1083250:intron | 40.0% |
| TGGTGTCTGGATAATTTGGT+GGG | + | chr7_2:83541280-83541299 | Msa1083250:intron | 40.0% | |
| AGTTTCACGTAAAGTAGACG+AGG | - | chr7_2:83541421-83541440 | None:intergenic | 40.0% | |
| CGTCTACTTTACGTGAAACT+TGG | + | chr7_2:83541421-83541440 | Msa1083250:intron | 40.0% | |
| AAATGAGACGATGTAGGCAT+TGG | - | chr7_2:83541454-83541473 | None:intergenic | 40.0% | |
| CATCATGGAATTGCGAAGAT+GGG | - | chr7_2:83541634-83541653 | None:intergenic | 40.0% | |
| GAATATCATCACTGCAAAGG+AGG | - | chr7_2:83541676-83541695 | None:intergenic | 40.0% | |
| TAAAAGTCAACCTTGTGGAG+CGG | - | chr7_2:83541718-83541737 | None:intergenic | 40.0% | |
| AGCACTAAAAGTCAACCTTG+TGG | - | chr7_2:83541723-83541742 | None:intergenic | 40.0% | |
| !! | ACAAGGTTGACTTTTAGTGC+TGG | + | chr7_2:83541722-83541741 | Msa1083250:CDS | 40.0% |
| GCAATGATGCTATGTACAAG+TGG | + | chr7_2:83542047-83542066 | Msa1083250:three_prime_UTR | 40.0% | |
| ATGCTATGTACAAGTGGTGT+TGG | + | chr7_2:83542053-83542072 | Msa1083250:three_prime_UTR | 40.0% | |
| ! | ATGTACAAGTGGTGTTGGAT+TGG | + | chr7_2:83542058-83542077 | Msa1083250:three_prime_UTR | 40.0% |
| GAGTATAGGCACTATCATGT+TGG | - | chr7_2:83542117-83542136 | None:intergenic | 40.0% | |
| ! | CGTGCGGTATTACTGTCTTT+TGG | + | chr7_2:83536915-83536934 | Msa1083250:five_prime_UTR | 45.0% |
| GATCTCGTGAGATCTAACTG+AGG | - | chr7_2:83537132-83537151 | None:intergenic | 45.0% | |
| AGACACAGAATCTCTCACCT+CGG | + | chr7_2:83537156-83537175 | Msa1083250:CDS | 45.0% | |
| ! | TCGTTTTCCAAGATATCCCG+AGG | - | chr7_2:83537176-83537195 | None:intergenic | 45.0% |
| ! | CGATGTCGTTTCAGTTCCAT+TGG | + | chr7_2:83537193-83537212 | Msa1083250:CDS | 45.0% |
| AGTGGGATCATAAGAGGTTG+AGG | - | chr7_2:83537248-83537267 | None:intergenic | 45.0% | |
| AGAGTGAGTGGGATCATAAG+AGG | - | chr7_2:83537254-83537273 | None:intergenic | 45.0% | |
| ATCCCACTCACTCTTATCCA+TGG | + | chr7_2:83537260-83537279 | Msa1083250:CDS | 45.0% | |
| CTCCATGGATAAGAGTGAGT+GGG | - | chr7_2:83537265-83537284 | None:intergenic | 45.0% | |
| !! | CTCCTTTAGAATCAGCTCCA+TGG | - | chr7_2:83537280-83537299 | None:intergenic | 45.0% |
| TGTGTTTCGATTCCCTGAGT+AGG | + | chr7_2:83537378-83537397 | Msa1083250:intron | 45.0% | |
| TTTCGATTCCCTGAGTAGGA+TGG | + | chr7_2:83537382-83537401 | Msa1083250:intron | 45.0% | |
| ATTTGCACCAGATCCAGATC+CGG | - | chr7_2:83537581-83537600 | None:intergenic | 45.0% | |
| CTGGATCTGGTGCAAATAGT+TGG | + | chr7_2:83537584-83537603 | Msa1083250:CDS | 45.0% | |
| ACGCGGTTCCTCAAAATACA+TGG | + | chr7_2:83537805-83537824 | Msa1083250:CDS | 45.0% | |
| CATATGGGTGGAAGGGTAAA+AGG | - | chr7_2:83537893-83537912 | None:intergenic | 45.0% | |
| CAGTACACATATGGGTGGAA+GGG | - | chr7_2:83537900-83537919 | None:intergenic | 45.0% | |
| TCAGTACACATATGGGTGGA+AGG | - | chr7_2:83537901-83537920 | None:intergenic | 45.0% | |
| ACTGGAACAGAGTCAAAGTG+AGG | + | chr7_2:83537982-83538001 | Msa1083250:CDS | 45.0% | |
| !! | GTCAAAGTGAGGTACTGTGA+TGG | + | chr7_2:83537993-83538012 | Msa1083250:CDS | 45.0% |
| !! | CAAAGTGAGGTACTGTGATG+GGG | + | chr7_2:83537995-83538014 | Msa1083250:CDS | 45.0% |
| ACGAGGTCAGTGAGATAGTA+TGG | + | chr7_2:83538042-83538061 | Msa1083250:intron | 45.0% | |
| GCTGCACAGCTTCAATTTAG+AGG | + | chr7_2:83538570-83538589 | Msa1083250:CDS | 45.0% | |
| ! | CTTTTATCTGGATGCTCTGC+GGG | + | chr7_2:83538735-83538754 | Msa1083250:CDS | 45.0% |
| ! | TGGAGGTGTAGTTAGCTTAC+AGG | + | chr7_2:83538981-83539000 | Msa1083250:CDS | 45.0% |
| AAATTACCGAAGTTGGGTCC+AGG | - | chr7_2:83539174-83539193 | None:intergenic | 45.0% | |
| ! | GTCCTCAAAGTGCTATGGTA+TGG | + | chr7_2:83539428-83539447 | Msa1083250:intron | 45.0% |
| TTTCCAACGGCAATCGCAAT+TGG | - | chr7_2:83540155-83540174 | None:intergenic | 45.0% | |
| TTGCGATTGCCGTTGGAAAT+TGG | + | chr7_2:83540156-83540175 | Msa1083250:CDS | 45.0% | |
| CTTGAAGACCAGATTATGGC+AGG | - | chr7_2:83540237-83540256 | None:intergenic | 45.0% | |
| CATTGGTAGAACTCCGTGAA+AGG | + | chr7_2:83540717-83540736 | Msa1083250:intron | 45.0% | |
| GAAAACACACGTACTCTCTC+CGG | - | chr7_2:83540842-83540861 | None:intergenic | 45.0% | |
| !! | GGAGAGAGTACGTGTGTTTT+CGG | + | chr7_2:83540841-83540860 | Msa1083250:intron | 45.0% |
| !! | GAGAGAGTACGTGTGTTTTC+GGG | + | chr7_2:83540842-83540861 | Msa1083250:intron | 45.0% |
| GGAACTTCTGGCCTGAATAT+TGG | - | chr7_2:83540968-83540987 | None:intergenic | 45.0% | |
| !! | AAGGAAAGCAGTGGACTACT+CGG | - | chr7_2:83540989-83541008 | None:intergenic | 45.0% |
| TTTCCTTTCCAACACCACGT+AGG | + | chr7_2:83541002-83541021 | Msa1083250:intron | 45.0% | |
| !! | CAGTGTTGGTAAATCTGCCA+TGG | + | chr7_2:83541552-83541571 | Msa1083250:intron | 45.0% |
| ! | TGTGGATTGAGAGTCTACCA+TGG | - | chr7_2:83541572-83541591 | None:intergenic | 45.0% |
| TGGTAGACTCTCAATCCACA+AGG | + | chr7_2:83541572-83541591 | Msa1083250:CDS | 45.0% | |
| CCATCATGGAATTGCGAAGA+TGG | - | chr7_2:83541635-83541654 | None:intergenic | 45.0% | |
| CCATCTTCGCAATTCCATGA+TGG | + | chr7_2:83541632-83541651 | Msa1083250:intron | 45.0% | |
| AAAAGTCAACCTTGTGGAGC+GGG | - | chr7_2:83541717-83541736 | None:intergenic | 45.0% | |
| ! | GACACTAGTGAAAGTATGCC+AGG | + | chr7_2:83541912-83541931 | Msa1083250:three_prime_UTR | 45.0% |
| ! | CTAGTGAAAGTATGCCAGGT+TGG | + | chr7_2:83541916-83541935 | Msa1083250:three_prime_UTR | 45.0% |
| ! | GAAAGTATGCCAGGTTGGAA+TGG | + | chr7_2:83541921-83541940 | Msa1083250:three_prime_UTR | 45.0% |
| ATTCTGATGCTGTAGCCTGT+AGG | + | chr7_2:83541965-83541984 | Msa1083250:three_prime_UTR | 45.0% | |
| TAGCCTGTAGGTGGTTGATT+GGG | + | chr7_2:83541977-83541996 | Msa1083250:three_prime_UTR | 45.0% | |
| ATTCCCAATCAACCACCTAC+AGG | - | chr7_2:83541983-83542002 | None:intergenic | 45.0% | |
| CACTCTCCAATGTGTGGTAC+TGG | - | chr7_2:83536995-83537014 | None:intergenic | 50.0% | |
| CACTCACACTCTCCAATGTG+TGG | - | chr7_2:83537001-83537020 | None:intergenic | 50.0% | |
| GACACAGAATCTCTCACCTC+GGG | + | chr7_2:83537157-83537176 | Msa1083250:CDS | 50.0% | |
| TCTCTCACCTCGGGATATCT+TGG | + | chr7_2:83537166-83537185 | Msa1083250:CDS | 50.0% | |
| GATGAACGCATAGCTGCCAA+TGG | - | chr7_2:83537212-83537231 | None:intergenic | 50.0% | |
| ATAAGAGGTTGAGGCAGCAG+GGG | - | chr7_2:83537239-83537258 | None:intergenic | 50.0% | |
| CATAAGAGGTTGAGGCAGCA+GGG | - | chr7_2:83537240-83537259 | None:intergenic | 50.0% | |
| TCATAAGAGGTTGAGGCAGC+AGG | - | chr7_2:83537241-83537260 | None:intergenic | 50.0% | |
| GCTCCATGGATAAGAGTGAG+TGG | - | chr7_2:83537266-83537285 | None:intergenic | 50.0% | |
| ! | GGAGCTGATTCTAAAGGAGC+AGG | + | chr7_2:83537281-83537300 | Msa1083250:CDS | 50.0% |
| TTTGCACCAGATCCAGATCC+GGG | - | chr7_2:83537580-83537599 | None:intergenic | 50.0% | |
| ! | CTTTTCTTCAGGGAGGAGGA+TGG | + | chr7_2:83537741-83537760 | Msa1083250:intron | 50.0% |
| CAGTGGAGACAGTCAAAACG+AGG | + | chr7_2:83538025-83538044 | Msa1083250:CDS | 50.0% | |
| GGTGGGGAGAGGTAAAACTA+TGG | + | chr7_2:83538244-83538263 | Msa1083250:intron | 50.0% | |
| TGAAGCTGTGCAGCCTGAAA+GGG | - | chr7_2:83538564-83538583 | None:intergenic | 50.0% | |
| TTGAAGCTGTGCAGCCTGAA+AGG | - | chr7_2:83538565-83538584 | None:intergenic | 50.0% | |
| GGGAATGAAGAACGCCAACA+AGG | + | chr7_2:83538635-83538654 | Msa1083250:CDS | 50.0% | |
| TAACCACCTGGACCCAACTT+CGG | + | chr7_2:83539165-83539184 | Msa1083250:CDS | 50.0% | |
| GCTGCATTCAGCAGAAACAG+TGG | - | chr7_2:83539317-83539336 | None:intergenic | 50.0% | |
| TGCAGCTTATGATGCATGGC+AGG | + | chr7_2:83539331-83539350 | Msa1083250:CDS | 50.0% | |
| AATGCGGGGCTAGACTTTCT+TGG | - | chr7_2:83539529-83539548 | None:intergenic | 50.0% | |
| ATGAGGATCTGCTGAATGCG+GGG | - | chr7_2:83539543-83539562 | None:intergenic | 50.0% | |
| CATGAGGATCTGCTGAATGC+GGG | - | chr7_2:83539544-83539563 | None:intergenic | 50.0% | |
| CCATGAGGATCTGCTGAATG+CGG | - | chr7_2:83539545-83539564 | None:intergenic | 50.0% | |
| CAGCAGATCCTCATGGATCT+TGG | + | chr7_2:83539549-83539568 | Msa1083250:CDS | 50.0% | |
| CTCTCCCCTCCTTAACAACA+TGG | + | chr7_2:83539855-83539874 | Msa1083250:CDS | 50.0% | |
| AGGCATAGAATGGGGTCCTT+GGG | - | chr7_2:83540507-83540526 | None:intergenic | 50.0% | |
| GACCCCATTCTATGCCTGAA+GGG | + | chr7_2:83540510-83540529 | Msa1083250:intron | 50.0% | |
| CACCCTTCAGGCATAGAATG+GGG | - | chr7_2:83540515-83540534 | None:intergenic | 50.0% | |
| CCACCCTTCAGGCATAGAAT+GGG | - | chr7_2:83540516-83540535 | None:intergenic | 50.0% | |
| ACCACCCTTCAGGCATAGAA+TGG | - | chr7_2:83540517-83540536 | None:intergenic | 50.0% | |
| !! | AAAAGAAGGCACCACCCTTC+AGG | - | chr7_2:83540527-83540546 | None:intergenic | 50.0% |
| !! | GTACGTGTGTTTTCGGGCTT+AGG | + | chr7_2:83540848-83540867 | Msa1083250:intron | 50.0% |
| !! | AGTGGACTACTCGGAACTTC+TGG | - | chr7_2:83540980-83540999 | None:intergenic | 50.0% |
| ! | GGTGTTGGAAAGGAAAGCAG+TGG | - | chr7_2:83540998-83541017 | None:intergenic | 50.0% |
| ! | TCACCTACGTGGTGTTGGAA+AGG | - | chr7_2:83541008-83541027 | None:intergenic | 50.0% |
| CCAACACCACGTAGGTGATT+CGG | + | chr7_2:83541010-83541029 | Msa1083250:intron | 50.0% | |
| TTCTGTCCGAATCACCTACG+TGG | - | chr7_2:83541019-83541038 | None:intergenic | 50.0% | |
| ! | AGGTGATTCGGACAGAACTC+AGG | + | chr7_2:83541022-83541041 | Msa1083250:intron | 50.0% |
| GGACAGAACTCAGGAAACAG+TGG | + | chr7_2:83541031-83541050 | Msa1083250:intron | 50.0% | |
| !! | ATGGCATTGGGTTTGGTGTC+TGG | + | chr7_2:83541267-83541286 | Msa1083250:intron | 50.0% |
| CGGGAATATAGCATGGAGGT+AGG | - | chr7_2:83541698-83541717 | None:intergenic | 50.0% | |
| TGTGGAGCGGGAATATAGCA+TGG | - | chr7_2:83541705-83541724 | None:intergenic | 50.0% | |
| TGCTATATTCCCGCTCCACA+AGG | + | chr7_2:83541705-83541724 | Msa1083250:CDS | 50.0% | |
| GTAGCCTGTAGGTGGTTGAT+TGG | + | chr7_2:83541976-83541995 | Msa1083250:three_prime_UTR | 50.0% | |
| CCTGGTTACCACTTCCATCC+CGG | + | chr7_2:83537559-83537578 | Msa1083250:CDS | 55.0% | |
| TACCACTTCCATCCCGGATC+TGG | + | chr7_2:83537565-83537584 | Msa1083250:CDS | 55.0% | |
| ATCCAGATCCGGGATGGAAG+TGG | - | chr7_2:83537570-83537589 | None:intergenic | 55.0% | |
| TTCCATCCCGGATCTGGATC+TGG | + | chr7_2:83537571-83537590 | Msa1083250:CDS | 55.0% | |
| ! | TGTGATGGGGCGTCTTTCAG+TGG | + | chr7_2:83538008-83538027 | Msa1083250:CDS | 55.0% |
| TATTACCTCACGCAGCCTGC+TGG | + | chr7_2:83538221-83538240 | Msa1083250:intron | 55.0% | |
| ATTACCTCACGCAGCCTGCT+GGG | + | chr7_2:83538222-83538241 | Msa1083250:intron | 55.0% | |
| GAAGCTGTGCAGCCTGAAAG+GGG | - | chr7_2:83538563-83538582 | None:intergenic | 55.0% | |
| TTATCTGGATGCTCTGCGGG+TGG | + | chr7_2:83538738-83538757 | Msa1083250:CDS | 55.0% | |
| CAGGCAATGATGCAGGCTAG+AGG | - | chr7_2:83538883-83538902 | None:intergenic | 55.0% | |
| ! | TATCTGGGGGGCACACATTG+AGG | + | chr7_2:83538950-83538969 | Msa1083250:CDS | 55.0% |
| TTACCGAAGTTGGGTCCAGG+TGG | - | chr7_2:83539171-83539190 | None:intergenic | 55.0% | |
| CCGCATTCAGCAGATCCTCA+TGG | + | chr7_2:83539542-83539561 | Msa1083250:CDS | 55.0% | |
| CAGCCAATTGCGATTGCCGT+TGG | + | chr7_2:83540149-83540168 | Msa1083250:intron | 55.0% | |
| CAGGCATAGAATGGGGTCCT+TGG | - | chr7_2:83540508-83540527 | None:intergenic | 55.0% | |
| GGACCCCATTCTATGCCTGA+AGG | + | chr7_2:83540509-83540528 | Msa1083250:intron | 55.0% | |
| CCCATTCTATGCCTGAAGGG+TGG | + | chr7_2:83540513-83540532 | Msa1083250:intron | 55.0% | |
| CCGAATCACCTACGTGGTGT+TGG | - | chr7_2:83541013-83541032 | None:intergenic | 55.0% | |
| GGAGCGGGAATATAGCATGG+AGG | - | chr7_2:83541702-83541721 | None:intergenic | 55.0% | |
| CTGATGCTGTAGCCTGTAGG+TGG | + | chr7_2:83541968-83541987 | Msa1083250:three_prime_UTR | 55.0% | |
| CCGGGATGGAAGTGGTAACC+AGG | - | chr7_2:83537562-83537581 | None:intergenic | 60.0% | |
| CACCAGATCCAGATCCGGGA+TGG | - | chr7_2:83537576-83537595 | None:intergenic | 60.0% | |
| TTACCTCACGCAGCCTGCTG+GGG | + | chr7_2:83538223-83538242 | Msa1083250:intron | 60.0% | |
| AGGTTGAGGCAGCAGGGGAG+AGG | - | chr7_2:83537234-83537253 | None:intergenic | 65.0% | |
| TTACCTCTCCCCACCCCAGC+AGG | - | chr7_2:83538239-83538258 | None:intergenic | 65.0% | |
| TGGATGCTCTGCGGGTGGTC+TGG | + | chr7_2:83538743-83538762 | Msa1083250:CDS | 65.0% | |
| CTCACGCAGCCTGCTGGGGT+GGG | + | chr7_2:83538227-83538246 | Msa1083250:intron | 70.0% | |
| TCACGCAGCCTGCTGGGGTG+GGG | + | chr7_2:83538228-83538247 | Msa1083250:intron | 70.0% | |
| CCACCCCAGCAGGCTGCGTG+AGG | - | chr7_2:83538229-83538248 | None:intergenic | 75.0% | |
| CCTCACGCAGCCTGCTGGGG+TGG | + | chr7_2:83538226-83538245 | Msa1083250:intron | 75.0% | |
| CAGCCTGCTGGGGTGGGGAG+AGG | + | chr7_2:83538233-83538252 | Msa1083250:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 83536909 | 83542308 | 83536909 | ID=Msa1083250;Name=Msa1083250 |
| chr7_2 | mRNA | 83536909 | 83542308 | 83536909 | ID=Msa1083250-mRNA-1;Parent=Msa1083250;Name=Msa1083250-mRNA-1;_AED=0.16;_eAED=0.16;_QI=159|1|1|1|1|1|14|521|474 |
| chr7_2 | exon | 83536909 | 83537302 | 83536909 | ID=Msa1083250-mRNA-1:exon:21939;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83537539 | 83537621 | 83537539 | ID=Msa1083250-mRNA-1:exon:21940;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83537752 | 83537881 | 83537752 | ID=Msa1083250-mRNA-1:exon:21941;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83537973 | 83538046 | 83537973 | ID=Msa1083250-mRNA-1:exon:21942;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83538570 | 83538656 | 83538570 | ID=Msa1083250-mRNA-1:exon:21943;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83538732 | 83538856 | 83538732 | ID=Msa1083250-mRNA-1:exon:21944;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83538942 | 83539002 | 83538942 | ID=Msa1083250-mRNA-1:exon:21945;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83539133 | 83539186 | 83539133 | ID=Msa1083250-mRNA-1:exon:21946;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83539275 | 83539352 | 83539275 | ID=Msa1083250-mRNA-1:exon:21947;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83539524 | 83539629 | 83539524 | ID=Msa1083250-mRNA-1:exon:21948;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83539731 | 83539876 | 83539731 | ID=Msa1083250-mRNA-1:exon:21949;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83540152 | 83540255 | 83540152 | ID=Msa1083250-mRNA-1:exon:21950;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83541555 | 83541593 | 83541555 | ID=Msa1083250-mRNA-1:exon:21951;Parent=Msa1083250-mRNA-1 |
| chr7_2 | exon | 83541685 | 83542308 | 83541685 | ID=Msa1083250-mRNA-1:exon:21952;Parent=Msa1083250-mRNA-1 |
| chr7_2 | five_prime_UTR | 83536909 | 83537067 | 83536909 | ID=Msa1083250-mRNA-1:five_prime_utr;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83537068 | 83537302 | 83537068 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83537539 | 83537621 | 83537539 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83537752 | 83537881 | 83537752 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83537973 | 83538046 | 83537973 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83538570 | 83538656 | 83538570 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83538732 | 83538856 | 83538732 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83538942 | 83539002 | 83538942 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83539133 | 83539186 | 83539133 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83539275 | 83539352 | 83539275 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83539524 | 83539629 | 83539524 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83539731 | 83539876 | 83539731 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83540152 | 83540255 | 83540152 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83541555 | 83541593 | 83541555 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | CDS | 83541685 | 83541787 | 83541685 | ID=Msa1083250-mRNA-1:cds;Parent=Msa1083250-mRNA-1 |
| chr7_2 | three_prime_UTR | 83541788 | 83542308 | 83541788 | ID=Msa1083250-mRNA-1:three_prime_utr;Parent=Msa1083250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
