AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040610 MtrunA17_Chr7g0270771 94.139 273 14 1 1 273 1 271 0.0 528
Msa1040610 MtrunA17_Chr4g0027071 31.378 392 243 7 12 380 19 407 1.22e-59 201
Msa1040610 MtrunA17_Chr1g0165671 29.167 408 253 10 4 390 26 418 7.99e-52 181
Msa1040610 MtrunA17_Chr6g0470591 32.152 395 235 13 13 378 19 409 8.86e-51 177
Msa1040610 MtrunA17_Chr1g0165661 29.157 415 263 12 4 398 8 411 1.33e-50 177
Msa1040610 MtrunA17_Chr1g0191081 29.337 392 245 9 5 376 18 397 1.53e-49 174
Msa1040610 MtrunA17_Chr3g0132001 31.358 405 231 12 2 380 11 394 1.93e-49 173
Msa1040610 MtrunA17_Chr7g0224391 31.016 374 204 11 39 381 48 398 6.93e-48 169
Msa1040610 MtrunA17_Chr5g0433641 28.398 412 243 11 4 384 9 399 1.71e-47 169
Msa1040610 MtrunA17_Chr7g0273781 30.641 359 200 13 1 327 39 380 8.36e-47 167
Msa1040610 MtrunA17_Chr3g0106691 32.763 409 215 16 12 379 63 452 1.58e-46 167
Msa1040610 MtrunA17_Chr7g0273791 30.532 357 199 12 3 327 8 347 5.63e-46 165
Msa1040610 MtrunA17_Chr7g0273761 28.326 466 269 17 3 427 380 821 5.91e-46 169
Msa1040610 MtrunA17_Chr7g0273761 28.409 264 147 9 136 376 32 276 1.82e-25 109
Msa1040610 MtrunA17_Chr8g0386141 31.378 392 229 12 12 380 14 388 6.12e-46 164
Msa1040610 MtrunA17_Chr1g0165681 27.228 404 252 9 5 383 9 395 1.10e-45 164
Msa1040610 MtrunA17_Chr7g0273721 27.536 414 245 10 4 384 10 401 2.90e-45 163
Msa1040610 MtrunA17_Chr1g0165711 28.480 467 225 16 5 429 6 405 4.45e-45 161
Msa1040610 MtrunA17_Chr2g0283361 29.815 379 239 11 22 385 28 394 1.45e-44 160
Msa1040610 MtrunA17_Chr7g0273731 27.628 409 233 12 4 376 92 473 2.33e-44 162
Msa1040610 MtrunA17_Chr3g0106661 31.204 407 230 14 12 379 17 412 4.19e-43 157
Msa1040610 MtrunA17_Chr3g0106721 34.503 342 180 13 12 319 17 348 1.55e-41 152
Msa1040610 MtrunA17_Chr3g0113821 29.469 414 235 15 4 380 3 396 2.00e-41 152
Msa1040610 MtrunA17_Chr3g0141851 30.789 393 238 16 13 384 20 399 2.91e-41 152
Msa1040610 MtrunA17_Chr3g0106741 33.634 333 190 13 69 379 59 382 3.41e-40 149
Msa1040610 MtrunA17_Chr3g0106761 29.692 357 204 13 49 379 16 351 1.93e-39 146
Msa1040610 MtrunA17_Chr2g0306321 30.266 413 230 15 52 429 75 464 6.51e-39 145
Msa1040610 MtrunA17_Chr8g0371821 29.565 345 217 10 52 379 53 388 1.23e-38 144
Msa1040610 MtrunA17_Chr4g0001861 27.518 407 234 15 52 423 53 433 1.81e-37 141
Msa1040610 MtrunA17_Chr3g0106711 40.426 188 98 3 12 186 17 203 1.62e-34 128
Msa1040610 MtrunA17_Chr4g0072041 27.901 405 237 13 50 416 65 452 2.25e-34 133
Msa1040610 MtrunA17_Chr2g0334001 26.835 395 248 13 12 379 10 390 3.58e-34 132
Msa1040610 MtrunA17_Chr7g0253541 27.069 447 266 19 13 412 12 445 6.97e-33 129
Msa1040610 MtrunA17_Chr4g0054081 28.438 429 262 14 18 412 27 444 3.58e-32 127
Msa1040610 MtrunA17_Chr7g0252731 24.566 403 248 11 2 380 14 384 2.49e-30 121
Msa1040610 MtrunA17_Chr7g0253501 26.969 419 248 17 10 379 7 416 3.36e-28 115
Msa1040610 MtrunA17_Chr3g0087401 25.679 405 251 15 13 376 10 405 3.92e-27 112
Msa1040610 MtrunA17_Chr7g0253531 25.837 418 254 15 10 379 7 416 1.34e-26 111
Msa1040610 MtrunA17_Chr7g0235531 27.224 371 215 13 58 395 61 409 2.09e-22 99.0
Msa1040610 MtrunA17_Chr6g0471971 28.390 236 122 9 152 372 2 205 1.08e-21 93.2
Msa1040610 MtrunA17_Chr2g0311401 25.188 266 168 7 135 379 5 260 4.53e-20 90.1
Msa1040610 MtrunA17_Chr4g0004691 29.480 173 95 4 14 174 16 173 4.15e-18 82.0
Msa1040610 MtrunA17_Chr3g0123061 23.724 392 260 16 1 377 1 368 1.12e-17 84.7
Msa1040610 MtrunA17_Chr8g0376901 23.133 415 276 16 1 391 1 396 2.05e-17 84.0
Msa1040610 MtrunA17_Chr3g0106631 33.766 154 75 5 137 271 2 147 2.10e-17 79.3
Msa1040610 MtrunA17_Chr5g0436621 23.796 353 200 11 13 299 14 363 4.51e-17 83.2
Msa1040610 MtrunA17_Chr7g0252771 25.786 159 108 3 222 380 61 209 5.78e-17 80.5
Msa1040610 MtrunA17_Chr3g0098961 32.515 163 96 3 1 152 9 168 1.89e-16 77.0
Msa1040610 MtrunA17_Chr3g0125001 24.259 371 234 13 49 389 49 402 4.60e-16 79.7
Msa1040610 MtrunA17_Chr3g0134091 25.455 275 165 11 55 302 68 329 1.07e-15 79.0
Msa1040610 MtrunA17_Chr7g0273741 38.095 105 60 1 4 103 9 113 1.68e-15 73.6
Msa1040610 MtrunA17_Chr8g0374641 24.865 370 217 14 47 377 49 396 1.83e-15 78.2
Msa1040610 MtrunA17_Chr4g0010381 25.326 383 237 16 44 390 41 410 3.13e-15 77.4
Msa1040610 MtrunA17_Chr3g0134041 27.881 269 166 10 55 302 66 327 3.36e-15 77.4
Msa1040610 MtrunA17_Chr5g0442691 24.107 448 271 17 2 399 30 458 4.90e-15 77.0
Msa1040610 MtrunA17_Chr7g0219291 23.698 384 223 17 55 386 416 781 8.36e-15 76.6
Msa1040610 MtrunA17_Chr5g0442701 23.438 448 274 16 2 399 7 435 8.48e-15 76.3
Msa1040610 MtrunA17_Chr3g0095731 24.936 389 229 15 55 399 65 434 1.60e-14 75.1
Msa1040610 MtrunA17_Chr8g0359251 23.757 362 238 12 55 390 63 412 1.97e-14 74.7
Msa1040610 MtrunA17_Chr4g0053061 24.390 369 225 13 47 377 77 429 4.20e-14 73.9
Msa1040610 MtrunA17_Chr3g0134061 27.304 293 157 12 50 302 63 339 5.10e-14 73.6
Msa1040610 MtrunA17_Chr4g0053111 25.000 352 222 12 55 377 62 400 5.53e-14 73.6
Msa1040610 MtrunA17_Chr5g0438681 21.970 396 273 15 1 378 1 378 7.57e-14 73.2
Msa1040610 MtrunA17_Chr8g0374911 23.383 402 242 13 17 377 46 422 1.76e-13 72.0
Msa1040610 MtrunA17_Chr3g0134111 24.000 275 165 11 55 298 65 326 2.41e-13 71.6
Msa1040610 MtrunA17_Chr2g0278481 23.704 405 241 17 12 375 24 401 6.33e-13 70.5
Msa1040610 MtrunA17_Chr6g0471371 36.275 102 60 1 5 101 9 110 9.10e-13 66.2
Msa1040610 MtrunA17_Chr8g0354371 25.797 345 219 14 55 377 64 393 1.11e-12 69.3
Msa1040610 MtrunA17_Chr3g0095721 23.373 415 258 13 55 428 72 467 1.18e-12 69.3
Msa1040610 MtrunA17_Chr1g0165741 36.893 103 60 1 4 101 8 110 1.64e-12 65.1
Msa1040610 MtrunA17_Chr3g0134121 23.292 322 205 12 55 346 69 378 1.68e-12 68.9
Msa1040610 MtrunA17_Chr5g0408911 22.419 339 231 11 4 325 24 347 6.99e-12 67.0
Msa1040610 MtrunA17_Chr8g0376891 22.222 396 279 12 1 378 1 385 7.35e-12 67.0
Msa1040610 MtrunA17_Chr4g0010121 23.577 369 222 14 47 377 89 435 1.33e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040610 AT3G62160.1 56.028 423 174 4 1 418 1 416 5.70e-168 478
Msa1040610 AT5G07080.1 32.010 403 239 12 5 380 14 408 3.57e-57 195
Msa1040610 AT3G47170.1 33.092 414 219 15 12 380 19 419 6.11e-56 192
Msa1040610 AT2G23510.1 30.900 411 244 14 11 396 19 414 4.26e-55 189
Msa1040610 AT1G28680.1 31.818 396 239 11 12 385 11 397 2.29e-53 184
Msa1040610 AT2G25150.1 30.318 409 247 14 11 391 19 417 1.49e-51 180
Msa1040610 AT5G41040.2 31.061 396 227 11 12 380 24 400 5.34e-49 173
Msa1040610 AT5G41040.1 31.061 396 227 11 12 380 40 416 8.37e-49 172
Msa1040610 AT1G28680.2 33.728 338 200 9 12 328 11 345 2.53e-48 170
Msa1040610 AT5G17540.1 28.889 450 282 15 1 425 5 441 3.62e-45 163
Msa1040610 AT3G03480.1 27.373 453 284 14 1 425 15 450 3.94e-44 160
Msa1040610 AT3G48720.1 30.049 406 236 12 2 380 6 390 9.64e-44 158
Msa1040610 AT5G63560.1 29.136 405 237 10 2 380 6 386 2.15e-41 152
Msa1040610 AT1G27620.1 27.990 393 248 11 12 384 16 393 1.67e-39 147
Msa1040610 AT5G48930.1 27.358 424 274 14 12 412 10 422 5.85e-37 140
Msa1040610 AT1G03390.1 28.000 425 255 17 15 403 32 441 1.59e-35 137
Msa1040610 AT2G40230.1 25.707 389 255 13 12 377 12 389 2.20e-33 130
Msa1040610 AT4G31910.1 24.586 362 229 10 55 380 64 417 2.83e-26 110
Msa1040610 AT2G19070.1 25.339 442 271 18 16 416 20 443 5.88e-26 109
Msa1040610 AT1G65450.1 23.587 407 268 15 2 380 15 406 1.39e-24 105
Msa1040610 AT5G57840.1 25.641 351 231 13 6 331 3 348 1.12e-21 97.1
Msa1040610 AT1G24430.1 24.455 413 253 18 1 383 1 384 5.93e-19 89.0
Msa1040610 AT3G26040.1 24.694 409 249 19 1 377 1 382 3.61e-16 80.5
Msa1040610 AT3G30280.1 22.803 421 248 17 1 377 1 388 6.31e-16 79.7
Msa1040610 AT2G39980.1 22.748 444 260 13 1 377 4 431 1.09e-15 79.3
Msa1040610 AT5G23940.1 23.616 271 175 9 55 299 65 329 1.12e-15 79.3
Msa1040610 AT1G24420.2 25.387 323 215 11 66 378 76 382 1.32e-15 79.0
Msa1040610 AT1G24420.1 25.387 323 215 11 66 378 76 382 1.32e-15 79.0
Msa1040610 AT3G29635.1 25.095 263 168 7 58 293 70 330 4.74e-15 77.4
Msa1040610 AT1G78990.1 24.286 420 268 14 37 428 51 448 1.43e-14 75.9
Msa1040610 AT1G32910.1 24.211 285 173 8 31 290 45 311 2.84e-14 75.1
Msa1040610 AT5G61160.1 22.946 353 231 10 55 377 64 405 1.03e-13 73.2
Msa1040610 AT5G07850.1 25.000 316 186 15 55 335 70 369 1.64e-13 72.4
Msa1040610 AT5G67150.1 23.513 353 225 15 55 377 61 398 2.43e-13 72.0
Msa1040610 AT5G39090.1 23.512 336 218 9 66 374 76 399 2.61e-13 72.0
Msa1040610 AT4G15390.1 23.002 413 259 17 1 378 4 392 5.04e-13 70.9
Msa1040610 AT4G15390.2 23.002 413 259 17 1 378 4 392 5.04e-13 70.9
Msa1040610 AT1G31490.1 24.151 265 174 10 53 303 60 311 9.81e-13 70.1
Msa1040610 AT5G07870.1 25.632 277 169 10 55 302 72 340 1.82e-12 69.3
Msa1040610 AT5G47950.1 24.505 404 237 17 10 384 11 375 3.68e-12 68.2
Msa1040610 AT5G07860.1 24.024 333 180 14 55 344 72 374 1.65e-11 66.2

Find 133 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCACCTTAATGATATT+TGG 0.168139 7_1:+77987732 None:intergenic
CTTATGACCCTTGCTGCTTT+AGG 0.196914 7_1:+77989226 None:intergenic
GTAACTTGGCCTTCGCTTCT+TGG 0.218637 7_1:+77987703 None:intergenic
CCCTTCATTGATCAAATTCA+TGG 0.225599 7_1:-77987405 Msa1040610:CDS
TTGTTTCAGGTGACACAATT+TGG 0.243793 7_1:-77988248 Msa1040610:intron
GGTATTGGGATCAAAATTAA+TGG 0.274653 7_1:+77987881 None:intergenic
CGTGACTAATGGGGTCTTCT+TGG 0.289626 7_1:+77989324 None:intergenic
ATAAACAGTGTGGCGTAATT+TGG 0.305140 7_1:+77987603 None:intergenic
TTAAGAACAAGATGTTATTA+TGG 0.308731 7_1:-77987311 Msa1040610:three_prime_UTR
AAATTGTTGCTGCATTGTTT+TGG 0.315379 7_1:-77987920 Msa1040610:CDS
ACGAGCTTCACTTGGGTATT+GGG 0.317286 7_1:+77987867 None:intergenic
GACATGTCTAACGTGACTAA+TGG 0.317293 7_1:+77989313 None:intergenic
CACGAGCTTCACTTGGGTAT+TGG 0.338327 7_1:+77987866 None:intergenic
ACATGTCTAACGTGACTAAT+GGG 0.342831 7_1:+77989314 None:intergenic
CTACGGAAACTGTTTCTTCC+CGG 0.347560 7_1:-77987793 Msa1040610:CDS
ACCAAACAAATCCCTCTGTT+TGG 0.351675 7_1:+77987459 None:intergenic
CACAATTTCTAAATGCGGTT+GGG 0.353325 7_1:-77988163 Msa1040610:CDS
TCGATCTCGTGAACATTATC+TGG 0.354322 7_1:+77989013 None:intergenic
AATAGCACCAAATATCATTA+AGG 0.359655 7_1:-77987739 Msa1040610:CDS
GAGGGATTTGTTTGGTTACA+TGG 0.381447 7_1:-77987452 Msa1040610:CDS
CATCACCCGAGCATTCGATT+TGG 0.396127 7_1:+77989128 None:intergenic
AGCGAGCGCACAATGCCAGC+TGG 0.403520 7_1:+77987489 None:intergenic
GGATCTGTACGAGATAGTTT+TGG 0.406955 7_1:+77988059 None:intergenic
GTTCCCTACTACCCTCTTGC+AGG 0.410598 7_1:-77989181 Msa1040610:CDS
TGACGCTCTTATTATAATAG+TGG 0.412031 7_1:+77987369 None:intergenic
ACTAATGGGGTCTTCTTGGC+TGG 0.413894 7_1:+77989328 None:intergenic
CCAAACAAATCCCTCTGTTT+GGG 0.414734 7_1:+77987460 None:intergenic
GGCTCTGTCATTGTGCCAGC+TGG 0.417334 7_1:-77987504 Msa1040610:CDS
ACTAGAATTAAAGAGTTGAT+TGG 0.421271 7_1:+77989407 None:intergenic
CCCAAACAGAGGGATTTGTT+TGG 0.424828 7_1:-77987460 Msa1040610:CDS
ACCATGAATTTGATCAATGA+AGG 0.441387 7_1:+77987404 None:intergenic
TGAATGGGGACCACGTGAAC+TGG 0.453923 7_1:+77987528 None:intergenic
CAAAGAACACGAGCTTCACT+TGG 0.457265 7_1:+77987859 None:intergenic
TAATTTGGTGTAGGTGCAAA+CGG 0.459581 7_1:+77987618 None:intergenic
GTTCACGTGGTCCCCATTCA+AGG 0.466370 7_1:-77987525 Msa1040610:CDS
AACAAATCAACCGGCTGAAG+AGG 0.471582 7_1:-77987983 Msa1040610:CDS
AGCTTGTAGCATGGCAATTG+AGG 0.475836 7_1:+77988035 None:intergenic
CACAATGACAGAGCCTTGAA+TGG 0.476977 7_1:+77987512 None:intergenic
ACAATGACAGAGCCTTGAAT+GGG 0.477089 7_1:+77987513 None:intergenic
CATGCCATATTCCAAAAGTC+TGG 0.480595 7_1:-77987345 Msa1040610:three_prime_UTR
GGTTACATGGTGTGTGGAGG+AGG 0.482479 7_1:-77987439 Msa1040610:CDS
GCACAATTTCTAAATGCGGT+TGG 0.485952 7_1:-77988164 Msa1040610:CDS
TACCCGCGGAACAAATCAAC+CGG 0.494219 7_1:-77987992 Msa1040610:CDS
AGGGAGTTTCAACAAGTAGC+TGG 0.495001 7_1:-77987963 Msa1040610:CDS
ATATGCTATGGCTGAATACC+AGG 0.497622 7_1:+77988204 None:intergenic
CAGTTTCCGTAGAAACCATT+GGG 0.497975 7_1:+77987804 None:intergenic
CAGGTGACACAATTTGGATG+TGG 0.498072 7_1:-77988242 Msa1040610:CDS
AGCCGGTTGATTTGTTCCGC+GGG 0.501795 7_1:+77987990 None:intergenic
CCGTAGAAACCATTGGGTAG+AGG 0.502506 7_1:+77987810 None:intergenic
CTAGTCTATATACATTATCA+TGG 0.510013 7_1:-77989389 Msa1040610:exon
AACGAACTCTGTAGGTAACT+TGG 0.510534 7_1:+77987689 None:intergenic
ACAGTTTCCGTAGAAACCAT+TGG 0.510842 7_1:+77987803 None:intergenic
GTGTCTCCAAATCGAATGCT+CGG 0.510997 7_1:-77989134 Msa1040610:CDS
GACATGGAGTCTATTCCATA+TGG 0.519087 7_1:-77989046 Msa1040610:CDS
TGCCACACTGGTTCGATGGT+GGG 0.525482 7_1:+77988116 None:intergenic
TGTCAATTTCTTTGATGACA+TGG 0.526407 7_1:-77989062 Msa1040610:CDS
AGAGTTCGTTAAGTACTTGA+AGG 0.527949 7_1:-77987676 Msa1040610:CDS
CCTCTACCCAATGGTTTCTA+CGG 0.530414 7_1:-77987810 Msa1040610:CDS
GTTGAAACTCCCTCTTCAGC+CGG 0.533444 7_1:+77987973 None:intergenic
ACAATTTCTAAATGCGGTTG+GGG 0.538479 7_1:-77988162 Msa1040610:CDS
GGCAATGCAGGTGCTTGAGA+GGG 0.540242 7_1:+77988080 None:intergenic
AAAAGTTGGTGATGAGTTTG+AGG 0.540386 7_1:-77987643 Msa1040610:CDS
CCATCGAACCAGTGTGGCAC+AGG 0.541590 7_1:-77988112 Msa1040610:CDS
AATTTGGTGTAGGTGCAAAC+GGG 0.541912 7_1:+77987619 None:intergenic
TTGTTTGGTTACATGGTGTG+TGG 0.542109 7_1:-77987445 Msa1040610:CDS
GAGTTCGTTAAGTACTTGAA+GGG 0.542176 7_1:-77987675 Msa1040610:CDS
CAAATCGAATGCTCGGGTGA+TGG 0.546018 7_1:-77989127 Msa1040610:CDS
TGGCAATGCAGGTGCTTGAG+AGG 0.546543 7_1:+77988079 None:intergenic
CACACTGTTTATGTCTGAGT+GGG 0.548336 7_1:-77987592 Msa1040610:CDS
TTGATACCTGCATTTGCACA+AGG 0.550638 7_1:+77988978 None:intergenic
CGCTGCCTCTCCCAAACAGA+GGG 0.554901 7_1:-77987470 Msa1040610:CDS
CAAGGCCATCACATATGCTA+TGG 0.559190 7_1:+77988192 None:intergenic
TGTCTCCAAATCGAATGCTC+GGG 0.560237 7_1:-77989133 Msa1040610:CDS
CATAAGAGAAGCATTGTCCT+TGG 0.560359 7_1:-77989209 Msa1040610:CDS
CATAGCATATGTGATGGCCT+TGG 0.562367 7_1:-77988191 Msa1040610:CDS
TTTGGTTACATGGTGTGTGG+AGG 0.562822 7_1:-77987442 Msa1040610:CDS
TTTCTTCCCGGTGACAACTA+CGG 0.567260 7_1:-77987781 Msa1040610:CDS
ACAAATCAACCGGCTGAAGA+GGG 0.571665 7_1:-77987982 Msa1040610:CDS
AAGAAGTTCCTGTGCCACAC+TGG 0.579986 7_1:+77988104 None:intergenic
GTGCCACACTGGTTCGATGG+TGG 0.580448 7_1:+77988115 None:intergenic
CAAATCCCTCTGTTTGGGAG+AGG 0.581922 7_1:+77987465 None:intergenic
CAGCCGGTTGATTTGTTCCG+CGG 0.581940 7_1:+77987989 None:intergenic
CAATGCAGCAACAATTTCAA+AGG 0.587018 7_1:+77987926 None:intergenic
TGACAACGTGGACTATCAGT+GGG 0.591110 7_1:-77987556 Msa1040610:CDS
TAGAAACCATTGGGTAGAGG+AGG 0.592332 7_1:+77987813 None:intergenic
CGTCCTGCAAGAGGGTAGTA+GGG 0.595097 7_1:+77989178 None:intergenic
ACTTTGCATGTGTTTAGACA+TGG 0.595433 7_1:-77989250 Msa1040610:CDS
AAGGGTGAACATGTAAAAGT+TGG 0.605756 7_1:-77987657 Msa1040610:CDS
GAATTTGATCAATGAAGGGA+AGG 0.607726 7_1:+77987409 None:intergenic
ACATGGTCCTAAAGCAGCAA+GGG 0.607905 7_1:-77989233 Msa1040610:CDS
GTGACACAATTTGGATGTGG+CGG 0.610534 7_1:-77988239 Msa1040610:CDS
CCATGAATTTGATCAATGAA+GGG 0.611998 7_1:+77987405 None:intergenic
CCTGTGCCACACTGGTTCGA+TGG 0.614749 7_1:+77988112 None:intergenic
AAGTACTTAACGAACTCTGT+AGG 0.616057 7_1:+77987681 None:intergenic
TGCTGCACAATTTCTAAATG+CGG 0.616691 7_1:-77988168 Msa1040610:CDS
ATGAGGCCGTAGTTGTCACC+GGG 0.617866 7_1:+77987775 None:intergenic
CACTGTTTATGTCTGAGTGG+GGG 0.619325 7_1:-77987590 Msa1040610:CDS
GAAGCTGATCCAAGAAGCGA+AGG 0.619889 7_1:-77987712 Msa1040610:CDS
GATACCTGCATTTGCACAAG+GGG 0.620916 7_1:+77988980 None:intergenic
TTCAGCCATAGCATATGTGA+TGG 0.621973 7_1:-77988197 Msa1040610:CDS
TGGGTAGAGGAGGGTCTATG+AGG 0.623215 7_1:+77987823 None:intergenic
TCTTTGAGTCGTCCTGCAAG+AGG 0.623517 7_1:+77989169 None:intergenic
GACATGGTCCTAAAGCAGCA+AGG 0.625518 7_1:-77989234 Msa1040610:CDS
TGATACCTGCATTTGCACAA+GGG 0.625833 7_1:+77988979 None:intergenic
ACACTGTTTATGTCTGAGTG+GGG 0.627014 7_1:-77987591 Msa1040610:CDS
TTGACAACGTGGACTATCAG+TGG 0.627330 7_1:-77987557 Msa1040610:CDS
AGCACCAAATATCATTAAGG+TGG 0.631034 7_1:-77987736 Msa1040610:CDS
CTTTGAGTCGTCCTGCAAGA+GGG 0.631239 7_1:+77989170 None:intergenic
TCGCTGCCTCTCCCAAACAG+AGG 0.631587 7_1:-77987471 Msa1040610:CDS
AAAGAACACGAGCTTCACTT+GGG 0.633247 7_1:+77987860 None:intergenic
CCACACTGTTTATGTCTGAG+TGG 0.633634 7_1:-77987593 Msa1040610:CDS
ATGGGGACCACGTGAACTGG+TGG 0.636640 7_1:+77987531 None:intergenic
AGAAACCATTGGGTAGAGGA+GGG 0.640266 7_1:+77987814 None:intergenic
ATAGACCCTCCTCTACCCAA+TGG 0.641614 7_1:-77987819 Msa1040610:CDS
TTGTAGCATGGCAATTGAGG+TGG 0.642367 7_1:+77988038 None:intergenic
GTGGGGTCCACCAGTTCACG+TGG 0.645647 7_1:-77987538 Msa1040610:CDS
GCGGTTGGGGAGCTAGCTAG+AGG 0.646349 7_1:-77988149 Msa1040610:CDS
CATGTCTAACGTGACTAATG+GGG 0.648319 7_1:+77989315 None:intergenic
GTAGTAGGGAACGAGTGCCA+AGG 0.654442 7_1:+77989192 None:intergenic
TATTCTAAGTGACTCGCATG+AGG 0.656537 7_1:+77987758 None:intergenic
AATGCTCGGGTGATGGTGTG+TGG 0.664811 7_1:-77989120 Msa1040610:CDS
TGATGGTGTGTGGTATGTTG+AGG 0.674012 7_1:-77989110 Msa1040610:CDS
GAATGCTCTAGCTTGTAGCA+TGG 0.675559 7_1:+77988026 None:intergenic
AGTGTGGCGTAATTTGGTGT+AGG 0.676968 7_1:+77987609 None:intergenic
TTAGAAATTGTGCAGCACCA+AGG 0.683698 7_1:+77988174 None:intergenic
CAATGACAGAGCCTTGAATG+GGG 0.694035 7_1:+77987514 None:intergenic
CATTCGATTTGGAGACACTG+CGG 0.705487 7_1:+77989139 None:intergenic
AACCCACCATCGAACCAGTG+TGG 0.713587 7_1:-77988118 Msa1040610:CDS
CCACTCAGACATAAACAGTG+TGG 0.735598 7_1:+77987593 None:intergenic
ATACCTGCATTTGCACAAGG+GGG 0.741803 7_1:+77988981 None:intergenic
TTCTAACATAGACATACCCG+CGG 0.757317 7_1:-77988006 Msa1040610:CDS
GACAACGTGGACTATCAGTG+GGG 0.766248 7_1:-77987555 Msa1040610:CDS
GAGGTTGGGATTTGACAACG+TGG 0.822802 7_1:-77987568 Msa1040610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCTATTTATTTAGTAT+TGG + chr7_1:77987765-77987784 None:intergenic 10.0%
!! TAAACATTAAAACTTAATAA+TGG - chr7_1:77987998-77988017 Msa1040610:CDS 10.0%
!!! TTGATTTTTTTTTTTTTTGT+TGG - chr7_1:77988110-77988129 Msa1040610:CDS 10.0%
!! AATTTCTATTTATTTAGTAT+TGG + chr7_1:77987765-77987784 None:intergenic 10.0%
!! TAAACATTAAAACTTAATAA+TGG - chr7_1:77987998-77988017 Msa1040610:CDS 10.0%
!!! TTGATTTTTTTTTTTTTTGT+TGG - chr7_1:77988110-77988129 Msa1040610:CDS 10.0%
!!! ATCAATTTCTTTTTTTGAAA+CGG + chr7_1:77987871-77987890 None:intergenic 15.0%
!!! TATTATTATTATTGTTGTTG+TGG - chr7_1:77988261-77988280 Msa1040610:intron 15.0%
!!! ATCAATTTCTTTTTTTGAAA+CGG + chr7_1:77987871-77987890 None:intergenic 15.0%
!!! TATTATTATTATTGTTGTTG+TGG - chr7_1:77988261-77988280 Msa1040610:intron 15.0%
!!! ATCATTGATCTCAATATTTT+TGG + chr7_1:77987919-77987938 None:intergenic 20.0%
!! CAATGATAAAATAAACAAAC+TGG - chr7_1:77987932-77987951 Msa1040610:CDS 20.0%
!! CACATAATAAATAATAATCG+TGG + chr7_1:77988051-77988070 None:intergenic 20.0%
!! AAAAATCAAAACTATGCAAT+TGG + chr7_1:77988099-77988118 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGTTGGAG+TGG - chr7_1:77988115-77988134 Msa1040610:CDS 20.0%
!! TTAAGAACAAGATGTTATTA+TGG - chr7_1:77989327-77989346 Msa1040610:CDS 20.0%
!!! ATCATTGATCTCAATATTTT+TGG + chr7_1:77987919-77987938 None:intergenic 20.0%
!! CAATGATAAAATAAACAAAC+TGG - chr7_1:77987932-77987951 Msa1040610:CDS 20.0%
!! CACATAATAAATAATAATCG+TGG + chr7_1:77988051-77988070 None:intergenic 20.0%
!! AAAAATCAAAACTATGCAAT+TGG + chr7_1:77988099-77988118 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGTTGGAG+TGG - chr7_1:77988115-77988134 Msa1040610:CDS 20.0%
!! TTAAGAACAAGATGTTATTA+TGG - chr7_1:77989327-77989346 Msa1040610:CDS 20.0%
!! ACTAGAATTAAAGAGTTGAT+TGG + chr7_1:77987234-77987253 Msa1040600:three_prime_UTR 25.0%
! CTAGTCTATATACATTATCA+TGG - chr7_1:77987249-77987268 Msa1040610:three_prime_UTR 25.0%
! TGATAAAATAAACAAACTGG+AGG - chr7_1:77987935-77987954 Msa1040610:CDS 25.0%
!!! GTATTTTGATTCTAGTACAA+CGG + chr7_1:77987976-77987995 None:intergenic 25.0%
! AATAGCACCAAATATCATTA+AGG - chr7_1:77988899-77988918 Msa1040610:intron 25.0%
!!! ACTACATTTTAGTTTCTTGA+CGG + chr7_1:77989376-77989395 None:intergenic 25.0%
!! ACTAGAATTAAAGAGTTGAT+TGG + chr7_1:77987234-77987253 Msa1040600:three_prime_UTR 25.0%
! CTAGTCTATATACATTATCA+TGG - chr7_1:77987249-77987268 Msa1040610:three_prime_UTR 25.0%
! TGATAAAATAAACAAACTGG+AGG - chr7_1:77987935-77987954 Msa1040610:CDS 25.0%
!!! GTATTTTGATTCTAGTACAA+CGG + chr7_1:77987976-77987995 None:intergenic 25.0%
! AATAGCACCAAATATCATTA+AGG - chr7_1:77988899-77988918 Msa1040610:intron 25.0%
!!! ACTACATTTTAGTTTCTTGA+CGG + chr7_1:77989376-77989395 None:intergenic 25.0%
!!! CTAACATAGCATTTTAGAAC+AGG + chr7_1:77987367-77987386 None:intergenic 30.0%
! TGTCAATTTCTTTGATGACA+TGG - chr7_1:77987576-77987595 Msa1040610:CDS 30.0%
!! TTTAGTATTGGCATAGCTTA+TGG + chr7_1:77987753-77987772 None:intergenic 30.0%
GTGAAATGTGAATGTATATC+TGG - chr7_1:77988068-77988087 Msa1040610:CDS 30.0%
! GTTAGACTAAACATTTTTCG+TGG + chr7_1:77988201-77988220 None:intergenic 30.0%
!!! CCTCAAGGTACATTTTTTAA+AGG + chr7_1:77988337-77988356 None:intergenic 30.0%
! CCTTTAAAAAATGTACCTTG+AGG - chr7_1:77988334-77988353 Msa1040610:intron 30.0%
! AAATTGTTGCTGCATTGTTT+TGG - chr7_1:77988718-77988737 Msa1040610:intron 30.0%
! GGTATTGGGATCAAAATTAA+TGG + chr7_1:77988760-77988779 None:intergenic 30.0%
TTCACCACCTTAATGATATT+TGG + chr7_1:77988909-77988928 None:intergenic 30.0%
CCATGAATTTGATCAATGAA+GGG + chr7_1:77989236-77989255 None:intergenic 30.0%
ACCATGAATTTGATCAATGA+AGG + chr7_1:77989237-77989256 None:intergenic 30.0%
TGACGCTCTTATTATAATAG+TGG + chr7_1:77989272-77989291 None:intergenic 30.0%
!!! CTAACATAGCATTTTAGAAC+AGG + chr7_1:77987367-77987386 None:intergenic 30.0%
! TGTCAATTTCTTTGATGACA+TGG - chr7_1:77987576-77987595 Msa1040610:CDS 30.0%
!! TTTAGTATTGGCATAGCTTA+TGG + chr7_1:77987753-77987772 None:intergenic 30.0%
GTGAAATGTGAATGTATATC+TGG - chr7_1:77988068-77988087 Msa1040610:CDS 30.0%
! GTTAGACTAAACATTTTTCG+TGG + chr7_1:77988201-77988220 None:intergenic 30.0%
!!! CCTCAAGGTACATTTTTTAA+AGG + chr7_1:77988337-77988356 None:intergenic 30.0%
! CCTTTAAAAAATGTACCTTG+AGG - chr7_1:77988334-77988353 Msa1040610:intron 30.0%
! AAATTGTTGCTGCATTGTTT+TGG - chr7_1:77988718-77988737 Msa1040610:intron 30.0%
! GGTATTGGGATCAAAATTAA+TGG + chr7_1:77988760-77988779 None:intergenic 30.0%
TTCACCACCTTAATGATATT+TGG + chr7_1:77988909-77988928 None:intergenic 30.0%
CCATGAATTTGATCAATGAA+GGG + chr7_1:77989236-77989255 None:intergenic 30.0%
ACCATGAATTTGATCAATGA+AGG + chr7_1:77989237-77989256 None:intergenic 30.0%
TGACGCTCTTATTATAATAG+TGG + chr7_1:77989272-77989291 None:intergenic 30.0%
ACATGTCTAACGTGACTAAT+GGG + chr7_1:77987327-77987346 None:intergenic 35.0%
ACTTTGCATGTGTTTAGACA+TGG - chr7_1:77987388-77987407 Msa1040610:CDS 35.0%
TCTGGAAAAAGACTACCATA+TGG + chr7_1:77987610-77987629 None:intergenic 35.0%
CAACTTACAAACTTCATGCT+AGG - chr7_1:77987680-77987699 Msa1040610:CDS 35.0%
!! CAAGAAGCACTAATAAGCTT+GGG + chr7_1:77987820-77987839 None:intergenic 35.0%
CTTATTAGTGCTTCTTGCAT+GGG - chr7_1:77987823-77987842 Msa1040610:CDS 35.0%
ATGTGAATGTATATCTGGTG+AGG - chr7_1:77988073-77988092 Msa1040610:CDS 35.0%
! AACATTTTTCGTGGTTACCT+GGG + chr7_1:77988192-77988211 None:intergenic 35.0%
! AAACATTTTTCGTGGTTACC+TGG + chr7_1:77988193-77988212 None:intergenic 35.0%
! CATGAGAGAATTCTTGTTTC+AGG - chr7_1:77988377-77988396 Msa1040610:intron 35.0%
! TTGTTTCAGGTGACACAATT+TGG - chr7_1:77988390-77988409 Msa1040610:intron 35.0%
TGCTGCACAATTTCTAAATG+CGG - chr7_1:77988470-77988489 Msa1040610:intron 35.0%
CACAATTTCTAAATGCGGTT+GGG - chr7_1:77988475-77988494 Msa1040610:intron 35.0%
ACAATTTCTAAATGCGGTTG+GGG - chr7_1:77988476-77988495 Msa1040610:intron 35.0%
CAATGCAGCAACAATTTCAA+AGG + chr7_1:77988715-77988734 None:intergenic 35.0%
AGCACCAAATATCATTAAGG+TGG - chr7_1:77988902-77988921 Msa1040610:intron 35.0%
AAGTACTTAACGAACTCTGT+AGG + chr7_1:77988960-77988979 None:intergenic 35.0%
AGAGTTCGTTAAGTACTTGA+AGG - chr7_1:77988962-77988981 Msa1040610:intron 35.0%
GAGTTCGTTAAGTACTTGAA+GGG - chr7_1:77988963-77988982 Msa1040610:intron 35.0%
AAGGGTGAACATGTAAAAGT+TGG - chr7_1:77988981-77989000 Msa1040610:intron 35.0%
!! AAAAGTTGGTGATGAGTTTG+AGG - chr7_1:77988995-77989014 Msa1040610:CDS 35.0%
!! TAATTTGGTGTAGGTGCAAA+CGG + chr7_1:77989023-77989042 None:intergenic 35.0%
ATAAACAGTGTGGCGTAATT+TGG + chr7_1:77989038-77989057 None:intergenic 35.0%
GAATTTGATCAATGAAGGGA+AGG + chr7_1:77989232-77989251 None:intergenic 35.0%
CCCTTCATTGATCAAATTCA+TGG - chr7_1:77989233-77989252 Msa1040610:CDS 35.0%
!!! AAAGCCAGACTTTTGGAATA+TGG + chr7_1:77989300-77989319 None:intergenic 35.0%
! GCATAAAAAAGCCAGACTTT+TGG + chr7_1:77989307-77989326 None:intergenic 35.0%
ACATGTCTAACGTGACTAAT+GGG + chr7_1:77987327-77987346 None:intergenic 35.0%
ACTTTGCATGTGTTTAGACA+TGG - chr7_1:77987388-77987407 Msa1040610:CDS 35.0%
TCTGGAAAAAGACTACCATA+TGG + chr7_1:77987610-77987629 None:intergenic 35.0%
CAACTTACAAACTTCATGCT+AGG - chr7_1:77987680-77987699 Msa1040610:CDS 35.0%
!! CAAGAAGCACTAATAAGCTT+GGG + chr7_1:77987820-77987839 None:intergenic 35.0%
CTTATTAGTGCTTCTTGCAT+GGG - chr7_1:77987823-77987842 Msa1040610:CDS 35.0%
ATGTGAATGTATATCTGGTG+AGG - chr7_1:77988073-77988092 Msa1040610:CDS 35.0%
! AACATTTTTCGTGGTTACCT+GGG + chr7_1:77988192-77988211 None:intergenic 35.0%
! AAACATTTTTCGTGGTTACC+TGG + chr7_1:77988193-77988212 None:intergenic 35.0%
! CATGAGAGAATTCTTGTTTC+AGG - chr7_1:77988377-77988396 Msa1040610:intron 35.0%
! TTGTTTCAGGTGACACAATT+TGG - chr7_1:77988390-77988409 Msa1040610:intron 35.0%
TGCTGCACAATTTCTAAATG+CGG - chr7_1:77988470-77988489 Msa1040610:intron 35.0%
CACAATTTCTAAATGCGGTT+GGG - chr7_1:77988475-77988494 Msa1040610:intron 35.0%
ACAATTTCTAAATGCGGTTG+GGG - chr7_1:77988476-77988495 Msa1040610:intron 35.0%
CAATGCAGCAACAATTTCAA+AGG + chr7_1:77988715-77988734 None:intergenic 35.0%
AGCACCAAATATCATTAAGG+TGG - chr7_1:77988902-77988921 Msa1040610:intron 35.0%
AAGTACTTAACGAACTCTGT+AGG + chr7_1:77988960-77988979 None:intergenic 35.0%
AGAGTTCGTTAAGTACTTGA+AGG - chr7_1:77988962-77988981 Msa1040610:intron 35.0%
GAGTTCGTTAAGTACTTGAA+GGG - chr7_1:77988963-77988982 Msa1040610:intron 35.0%
AAGGGTGAACATGTAAAAGT+TGG - chr7_1:77988981-77989000 Msa1040610:intron 35.0%
!! AAAAGTTGGTGATGAGTTTG+AGG - chr7_1:77988995-77989014 Msa1040610:CDS 35.0%
!! TAATTTGGTGTAGGTGCAAA+CGG + chr7_1:77989023-77989042 None:intergenic 35.0%
ATAAACAGTGTGGCGTAATT+TGG + chr7_1:77989038-77989057 None:intergenic 35.0%
GAATTTGATCAATGAAGGGA+AGG + chr7_1:77989232-77989251 None:intergenic 35.0%
CCCTTCATTGATCAAATTCA+TGG - chr7_1:77989233-77989252 Msa1040610:CDS 35.0%
!!! AAAGCCAGACTTTTGGAATA+TGG + chr7_1:77989300-77989319 None:intergenic 35.0%
! GCATAAAAAAGCCAGACTTT+TGG + chr7_1:77989307-77989326 None:intergenic 35.0%
CATGTCTAACGTGACTAATG+GGG + chr7_1:77987326-77987345 None:intergenic 40.0%
GACATGTCTAACGTGACTAA+TGG + chr7_1:77987328-77987347 None:intergenic 40.0%
!! CATAAGAGAAGCATTGTCCT+TGG - chr7_1:77987429-77987448 Msa1040610:CDS 40.0%
GACATGGAGTCTATTCCATA+TGG - chr7_1:77987592-77987611 Msa1040610:CDS 40.0%
TCGATCTCGTGAACATTATC+TGG + chr7_1:77987628-77987647 None:intergenic 40.0%
TGATACCTGCATTTGCACAA+GGG + chr7_1:77987662-77987681 None:intergenic 40.0%
TTGATACCTGCATTTGCACA+AGG + chr7_1:77987663-77987682 None:intergenic 40.0%
AAGCACTAATAAGCTTGGGT+GGG + chr7_1:77987816-77987835 None:intergenic 40.0%
!! GCAAGAAGCACTAATAAGCT+TGG + chr7_1:77987821-77987840 None:intergenic 40.0%
GCTTATTAGTGCTTCTTGCA+TGG - chr7_1:77987822-77987841 Msa1040610:CDS 40.0%
! GATCTCTTGTTTGTGTGTGT+GGG + chr7_1:77988158-77988177 None:intergenic 40.0%
ACAATCTAACGATTGCTCGT+TGG - chr7_1:77988219-77988238 Msa1040610:CDS 40.0%
ACATGAGTAAACGATCCTCA+AGG + chr7_1:77988352-77988371 None:intergenic 40.0%
GAGGATCGTTTACTCATGTT+TGG - chr7_1:77988353-77988372 Msa1040610:intron 40.0%
ATATGCTATGGCTGAATACC+AGG + chr7_1:77988437-77988456 None:intergenic 40.0%
TTCAGCCATAGCATATGTGA+TGG - chr7_1:77988441-77988460 Msa1040610:intron 40.0%
TTAGAAATTGTGCAGCACCA+AGG + chr7_1:77988467-77988486 None:intergenic 40.0%
GCACAATTTCTAAATGCGGT+TGG - chr7_1:77988474-77988493 Msa1040610:intron 40.0%
! GGATCTGTACGAGATAGTTT+TGG + chr7_1:77988582-77988601 None:intergenic 40.0%
TTCTAACATAGACATACCCG+CGG - chr7_1:77988632-77988651 Msa1040610:intron 40.0%
AAAGAACACGAGCTTCACTT+GGG + chr7_1:77988781-77988800 None:intergenic 40.0%
CAGTTTCCGTAGAAACCATT+GGG + chr7_1:77988837-77988856 None:intergenic 40.0%
ACAGTTTCCGTAGAAACCAT+TGG + chr7_1:77988838-77988857 None:intergenic 40.0%
TATTCTAAGTGACTCGCATG+AGG + chr7_1:77988883-77988902 None:intergenic 40.0%
AACGAACTCTGTAGGTAACT+TGG + chr7_1:77988952-77988971 None:intergenic 40.0%
!! AATTTGGTGTAGGTGCAAAC+GGG + chr7_1:77989022-77989041 None:intergenic 40.0%
CACACTGTTTATGTCTGAGT+GGG - chr7_1:77989046-77989065 Msa1040610:CDS 40.0%
ACACTGTTTATGTCTGAGTG+GGG - chr7_1:77989047-77989066 Msa1040610:CDS 40.0%
ACAATGACAGAGCCTTGAAT+GGG + chr7_1:77989128-77989147 None:intergenic 40.0%
CCAAACAAATCCCTCTGTTT+GGG + chr7_1:77989181-77989200 None:intergenic 40.0%
ACCAAACAAATCCCTCTGTT+TGG + chr7_1:77989182-77989201 None:intergenic 40.0%
! GAGGGATTTGTTTGGTTACA+TGG - chr7_1:77989186-77989205 Msa1040610:CDS 40.0%
TTGTTTGGTTACATGGTGTG+TGG - chr7_1:77989193-77989212 Msa1040610:CDS 40.0%
!!! CAGACTTTTGGAATATGGCA+TGG + chr7_1:77989295-77989314 None:intergenic 40.0%
CATGCCATATTCCAAAAGTC+TGG - chr7_1:77989293-77989312 Msa1040610:CDS 40.0%
CATGTCTAACGTGACTAATG+GGG + chr7_1:77987326-77987345 None:intergenic 40.0%
GACATGTCTAACGTGACTAA+TGG + chr7_1:77987328-77987347 None:intergenic 40.0%
!! CATAAGAGAAGCATTGTCCT+TGG - chr7_1:77987429-77987448 Msa1040610:CDS 40.0%
GACATGGAGTCTATTCCATA+TGG - chr7_1:77987592-77987611 Msa1040610:CDS 40.0%
TCGATCTCGTGAACATTATC+TGG + chr7_1:77987628-77987647 None:intergenic 40.0%
TGATACCTGCATTTGCACAA+GGG + chr7_1:77987662-77987681 None:intergenic 40.0%
TTGATACCTGCATTTGCACA+AGG + chr7_1:77987663-77987682 None:intergenic 40.0%
AAGCACTAATAAGCTTGGGT+GGG + chr7_1:77987816-77987835 None:intergenic 40.0%
!! GCAAGAAGCACTAATAAGCT+TGG + chr7_1:77987821-77987840 None:intergenic 40.0%
GCTTATTAGTGCTTCTTGCA+TGG - chr7_1:77987822-77987841 Msa1040610:CDS 40.0%
! GATCTCTTGTTTGTGTGTGT+GGG + chr7_1:77988158-77988177 None:intergenic 40.0%
ACAATCTAACGATTGCTCGT+TGG - chr7_1:77988219-77988238 Msa1040610:CDS 40.0%
ACATGAGTAAACGATCCTCA+AGG + chr7_1:77988352-77988371 None:intergenic 40.0%
GAGGATCGTTTACTCATGTT+TGG - chr7_1:77988353-77988372 Msa1040610:intron 40.0%
ATATGCTATGGCTGAATACC+AGG + chr7_1:77988437-77988456 None:intergenic 40.0%
TTCAGCCATAGCATATGTGA+TGG - chr7_1:77988441-77988460 Msa1040610:intron 40.0%
TTAGAAATTGTGCAGCACCA+AGG + chr7_1:77988467-77988486 None:intergenic 40.0%
GCACAATTTCTAAATGCGGT+TGG - chr7_1:77988474-77988493 Msa1040610:intron 40.0%
! GGATCTGTACGAGATAGTTT+TGG + chr7_1:77988582-77988601 None:intergenic 40.0%
TTCTAACATAGACATACCCG+CGG - chr7_1:77988632-77988651 Msa1040610:intron 40.0%
AAAGAACACGAGCTTCACTT+GGG + chr7_1:77988781-77988800 None:intergenic 40.0%
CAGTTTCCGTAGAAACCATT+GGG + chr7_1:77988837-77988856 None:intergenic 40.0%
ACAGTTTCCGTAGAAACCAT+TGG + chr7_1:77988838-77988857 None:intergenic 40.0%
TATTCTAAGTGACTCGCATG+AGG + chr7_1:77988883-77988902 None:intergenic 40.0%
AACGAACTCTGTAGGTAACT+TGG + chr7_1:77988952-77988971 None:intergenic 40.0%
!! AATTTGGTGTAGGTGCAAAC+GGG + chr7_1:77989022-77989041 None:intergenic 40.0%
CACACTGTTTATGTCTGAGT+GGG - chr7_1:77989046-77989065 Msa1040610:CDS 40.0%
ACACTGTTTATGTCTGAGTG+GGG - chr7_1:77989047-77989066 Msa1040610:CDS 40.0%
ACAATGACAGAGCCTTGAAT+GGG + chr7_1:77989128-77989147 None:intergenic 40.0%
CCAAACAAATCCCTCTGTTT+GGG + chr7_1:77989181-77989200 None:intergenic 40.0%
ACCAAACAAATCCCTCTGTT+TGG + chr7_1:77989182-77989201 None:intergenic 40.0%
! GAGGGATTTGTTTGGTTACA+TGG - chr7_1:77989186-77989205 Msa1040610:CDS 40.0%
TTGTTTGGTTACATGGTGTG+TGG - chr7_1:77989193-77989212 Msa1040610:CDS 40.0%
!!! CAGACTTTTGGAATATGGCA+TGG + chr7_1:77989295-77989314 None:intergenic 40.0%
CATGCCATATTCCAAAAGTC+TGG - chr7_1:77989293-77989312 Msa1040610:CDS 40.0%
ACATGGTCCTAAAGCAGCAA+GGG - chr7_1:77987405-77987424 Msa1040610:CDS 45.0%
!! CTTATGACCCTTGCTGCTTT+AGG + chr7_1:77987415-77987434 None:intergenic 45.0%
!! CATTCGATTTGGAGACACTG+CGG + chr7_1:77987502-77987521 None:intergenic 45.0%
GTGTCTCCAAATCGAATGCT+CGG - chr7_1:77987504-77987523 Msa1040610:CDS 45.0%
TGTCTCCAAATCGAATGCTC+GGG - chr7_1:77987505-77987524 Msa1040610:CDS 45.0%
! TGATGGTGTGTGGTATGTTG+AGG - chr7_1:77987528-77987547 Msa1040610:CDS 45.0%
ATACCTGCATTTGCACAAGG+GGG + chr7_1:77987660-77987679 None:intergenic 45.0%
GATACCTGCATTTGCACAAG+GGG + chr7_1:77987661-77987680 None:intergenic 45.0%
TGGGACTAATAAGCTTGGGT+GGG + chr7_1:77987797-77987816 None:intergenic 45.0%
TGGGTGGGACTAATAAGCTT+GGG + chr7_1:77987801-77987820 None:intergenic 45.0%
TTGGGTGGGACTAATAAGCT+TGG + chr7_1:77987802-77987821 None:intergenic 45.0%
! GAAGCACTAATAAGCTTGGG+TGG + chr7_1:77987817-77987836 None:intergenic 45.0%
GTTTGTGTGTGTGGGTCTTT+AGG + chr7_1:77988150-77988169 None:intergenic 45.0%
! GGATCTCTTGTTTGTGTGTG+TGG + chr7_1:77988159-77988178 None:intergenic 45.0%
GGTTACCTGGGTTCGAAATT+GGG + chr7_1:77988180-77988199 None:intergenic 45.0%
TGGTTACCTGGGTTCGAAAT+TGG + chr7_1:77988181-77988200 None:intergenic 45.0%
TAACGATTGCTCGTTGGACT+AGG - chr7_1:77988225-77988244 Msa1040610:CDS 45.0%
CAGGTGACACAATTTGGATG+TGG - chr7_1:77988396-77988415 Msa1040610:intron 45.0%
GTGACACAATTTGGATGTGG+CGG - chr7_1:77988399-77988418 Msa1040610:intron 45.0%
CAAGGCCATCACATATGCTA+TGG + chr7_1:77988449-77988468 None:intergenic 45.0%
CATAGCATATGTGATGGCCT+TGG - chr7_1:77988447-77988466 Msa1040610:intron 45.0%
!!! CGAGATAGTTTTGGCAATGC+AGG + chr7_1:77988573-77988592 None:intergenic 45.0%
TTGTAGCATGGCAATTGAGG+TGG + chr7_1:77988603-77988622 None:intergenic 45.0%
AGCTTGTAGCATGGCAATTG+AGG + chr7_1:77988606-77988625 None:intergenic 45.0%
! GAATGCTCTAGCTTGTAGCA+TGG + chr7_1:77988615-77988634 None:intergenic 45.0%
AACAAATCAACCGGCTGAAG+AGG - chr7_1:77988655-77988674 Msa1040610:intron 45.0%
ACAAATCAACCGGCTGAAGA+GGG - chr7_1:77988656-77988675 Msa1040610:intron 45.0%
AGGGAGTTTCAACAAGTAGC+TGG - chr7_1:77988675-77988694 Msa1040610:intron 45.0%
ACGAGCTTCACTTGGGTATT+GGG + chr7_1:77988774-77988793 None:intergenic 45.0%
CAAAGAACACGAGCTTCACT+TGG + chr7_1:77988782-77988801 None:intergenic 45.0%
AGAAACCATTGGGTAGAGGA+GGG + chr7_1:77988827-77988846 None:intergenic 45.0%
TAGAAACCATTGGGTAGAGG+AGG + chr7_1:77988828-77988847 None:intergenic 45.0%
CCTCTACCCAATGGTTTCTA+CGG - chr7_1:77988828-77988847 Msa1040610:intron 45.0%
! CTACGGAAACTGTTTCTTCC+CGG - chr7_1:77988845-77988864 Msa1040610:intron 45.0%
TTTCTTCCCGGTGACAACTA+CGG - chr7_1:77988857-77988876 Msa1040610:intron 45.0%
!! AGTGTGGCGTAATTTGGTGT+AGG + chr7_1:77989032-77989051 None:intergenic 45.0%
CCACTCAGACATAAACAGTG+TGG + chr7_1:77989048-77989067 None:intergenic 45.0%
CCACACTGTTTATGTCTGAG+TGG - chr7_1:77989045-77989064 Msa1040610:CDS 45.0%
CACTGTTTATGTCTGAGTGG+GGG - chr7_1:77989048-77989067 Msa1040610:CDS 45.0%
! TTGACAACGTGGACTATCAG+TGG - chr7_1:77989081-77989100 Msa1040610:CDS 45.0%
! TGACAACGTGGACTATCAGT+GGG - chr7_1:77989082-77989101 Msa1040610:CDS 45.0%
CAATGACAGAGCCTTGAATG+GGG + chr7_1:77989127-77989146 None:intergenic 45.0%
CACAATGACAGAGCCTTGAA+TGG + chr7_1:77989129-77989148 None:intergenic 45.0%
! CCCAAACAGAGGGATTTGTT+TGG - chr7_1:77989178-77989197 Msa1040610:CDS 45.0%
TTTGGTTACATGGTGTGTGG+AGG - chr7_1:77989196-77989215 Msa1040610:CDS 45.0%
ACATGGTCCTAAAGCAGCAA+GGG - chr7_1:77987405-77987424 Msa1040610:CDS 45.0%
!! CTTATGACCCTTGCTGCTTT+AGG + chr7_1:77987415-77987434 None:intergenic 45.0%
!! CATTCGATTTGGAGACACTG+CGG + chr7_1:77987502-77987521 None:intergenic 45.0%
GTGTCTCCAAATCGAATGCT+CGG - chr7_1:77987504-77987523 Msa1040610:CDS 45.0%
TGTCTCCAAATCGAATGCTC+GGG - chr7_1:77987505-77987524 Msa1040610:CDS 45.0%
! TGATGGTGTGTGGTATGTTG+AGG - chr7_1:77987528-77987547 Msa1040610:CDS 45.0%
ATACCTGCATTTGCACAAGG+GGG + chr7_1:77987660-77987679 None:intergenic 45.0%
GATACCTGCATTTGCACAAG+GGG + chr7_1:77987661-77987680 None:intergenic 45.0%
TGGGACTAATAAGCTTGGGT+GGG + chr7_1:77987797-77987816 None:intergenic 45.0%
TGGGTGGGACTAATAAGCTT+GGG + chr7_1:77987801-77987820 None:intergenic 45.0%
TTGGGTGGGACTAATAAGCT+TGG + chr7_1:77987802-77987821 None:intergenic 45.0%
! GAAGCACTAATAAGCTTGGG+TGG + chr7_1:77987817-77987836 None:intergenic 45.0%
GTTTGTGTGTGTGGGTCTTT+AGG + chr7_1:77988150-77988169 None:intergenic 45.0%
! GGATCTCTTGTTTGTGTGTG+TGG + chr7_1:77988159-77988178 None:intergenic 45.0%
GGTTACCTGGGTTCGAAATT+GGG + chr7_1:77988180-77988199 None:intergenic 45.0%
TGGTTACCTGGGTTCGAAAT+TGG + chr7_1:77988181-77988200 None:intergenic 45.0%
TAACGATTGCTCGTTGGACT+AGG - chr7_1:77988225-77988244 Msa1040610:CDS 45.0%
CAGGTGACACAATTTGGATG+TGG - chr7_1:77988396-77988415 Msa1040610:intron 45.0%
GTGACACAATTTGGATGTGG+CGG - chr7_1:77988399-77988418 Msa1040610:intron 45.0%
CAAGGCCATCACATATGCTA+TGG + chr7_1:77988449-77988468 None:intergenic 45.0%
CATAGCATATGTGATGGCCT+TGG - chr7_1:77988447-77988466 Msa1040610:intron 45.0%
!!! CGAGATAGTTTTGGCAATGC+AGG + chr7_1:77988573-77988592 None:intergenic 45.0%
TTGTAGCATGGCAATTGAGG+TGG + chr7_1:77988603-77988622 None:intergenic 45.0%
AGCTTGTAGCATGGCAATTG+AGG + chr7_1:77988606-77988625 None:intergenic 45.0%
! GAATGCTCTAGCTTGTAGCA+TGG + chr7_1:77988615-77988634 None:intergenic 45.0%
AACAAATCAACCGGCTGAAG+AGG - chr7_1:77988655-77988674 Msa1040610:intron 45.0%
ACAAATCAACCGGCTGAAGA+GGG - chr7_1:77988656-77988675 Msa1040610:intron 45.0%
AGGGAGTTTCAACAAGTAGC+TGG - chr7_1:77988675-77988694 Msa1040610:intron 45.0%
ACGAGCTTCACTTGGGTATT+GGG + chr7_1:77988774-77988793 None:intergenic 45.0%
CAAAGAACACGAGCTTCACT+TGG + chr7_1:77988782-77988801 None:intergenic 45.0%
AGAAACCATTGGGTAGAGGA+GGG + chr7_1:77988827-77988846 None:intergenic 45.0%
TAGAAACCATTGGGTAGAGG+AGG + chr7_1:77988828-77988847 None:intergenic 45.0%
CCTCTACCCAATGGTTTCTA+CGG - chr7_1:77988828-77988847 Msa1040610:intron 45.0%
! CTACGGAAACTGTTTCTTCC+CGG - chr7_1:77988845-77988864 Msa1040610:intron 45.0%
TTTCTTCCCGGTGACAACTA+CGG - chr7_1:77988857-77988876 Msa1040610:intron 45.0%
!! AGTGTGGCGTAATTTGGTGT+AGG + chr7_1:77989032-77989051 None:intergenic 45.0%
CCACTCAGACATAAACAGTG+TGG + chr7_1:77989048-77989067 None:intergenic 45.0%
CCACACTGTTTATGTCTGAG+TGG - chr7_1:77989045-77989064 Msa1040610:CDS 45.0%
CACTGTTTATGTCTGAGTGG+GGG - chr7_1:77989048-77989067 Msa1040610:CDS 45.0%
! TTGACAACGTGGACTATCAG+TGG - chr7_1:77989081-77989100 Msa1040610:CDS 45.0%
! TGACAACGTGGACTATCAGT+GGG - chr7_1:77989082-77989101 Msa1040610:CDS 45.0%
CAATGACAGAGCCTTGAATG+GGG + chr7_1:77989127-77989146 None:intergenic 45.0%
CACAATGACAGAGCCTTGAA+TGG + chr7_1:77989129-77989148 None:intergenic 45.0%
! CCCAAACAGAGGGATTTGTT+TGG - chr7_1:77989178-77989197 Msa1040610:CDS 45.0%
TTTGGTTACATGGTGTGTGG+AGG - chr7_1:77989196-77989215 Msa1040610:CDS 45.0%
ACTAATGGGGTCTTCTTGGC+TGG + chr7_1:77987313-77987332 None:intergenic 50.0%
CGTGACTAATGGGGTCTTCT+TGG + chr7_1:77987317-77987336 None:intergenic 50.0%
GACATGGTCCTAAAGCAGCA+AGG - chr7_1:77987404-77987423 Msa1040610:CDS 50.0%
CTTTGAGTCGTCCTGCAAGA+GGG + chr7_1:77987471-77987490 None:intergenic 50.0%
TCTTTGAGTCGTCCTGCAAG+AGG + chr7_1:77987472-77987491 None:intergenic 50.0%
CATCACCCGAGCATTCGATT+TGG + chr7_1:77987513-77987532 None:intergenic 50.0%
CAAATCGAATGCTCGGGTGA+TGG - chr7_1:77987511-77987530 Msa1040610:CDS 50.0%
GTGGGACTAATAAGCTTGGG+TGG + chr7_1:77987798-77987817 None:intergenic 50.0%
TGTGTGTGTGGGTCTTTAGG+TGG + chr7_1:77988147-77988166 None:intergenic 50.0%
GAGATCCCAATTTCGAACCC+AGG - chr7_1:77988172-77988191 Msa1040610:CDS 50.0%
!! GGATGTGGCGGTTTTGTGAT+AGG - chr7_1:77988411-77988430 Msa1040610:intron 50.0%
AAGAAGTTCCTGTGCCACAC+TGG + chr7_1:77988537-77988556 None:intergenic 50.0%
TACCCGCGGAACAAATCAAC+CGG - chr7_1:77988646-77988665 Msa1040610:intron 50.0%
GTTGAAACTCCCTCTTCAGC+CGG + chr7_1:77988668-77988687 None:intergenic 50.0%
CACGAGCTTCACTTGGGTAT+TGG + chr7_1:77988775-77988794 None:intergenic 50.0%
ATAGACCCTCCTCTACCCAA+TGG - chr7_1:77988819-77988838 Msa1040610:intron 50.0%
CCGTAGAAACCATTGGGTAG+AGG + chr7_1:77988831-77988850 None:intergenic 50.0%
GAAGCTGATCCAAGAAGCGA+AGG - chr7_1:77988926-77988945 Msa1040610:intron 50.0%
! GTAACTTGGCCTTCGCTTCT+TGG + chr7_1:77988938-77988957 None:intergenic 50.0%
TGTTTATGTCTGAGTGGGGG+AGG - chr7_1:77989051-77989070 Msa1040610:CDS 50.0%
GAGGTTGGGATTTGACAACG+TGG - chr7_1:77989070-77989089 Msa1040610:CDS 50.0%
! GACAACGTGGACTATCAGTG+GGG - chr7_1:77989083-77989102 Msa1040610:CDS 50.0%
CAAATCCCTCTGTTTGGGAG+AGG + chr7_1:77989176-77989195 None:intergenic 50.0%
ACTAATGGGGTCTTCTTGGC+TGG + chr7_1:77987313-77987332 None:intergenic 50.0%
CGTGACTAATGGGGTCTTCT+TGG + chr7_1:77987317-77987336 None:intergenic 50.0%
GACATGGTCCTAAAGCAGCA+AGG - chr7_1:77987404-77987423 Msa1040610:CDS 50.0%
CTTTGAGTCGTCCTGCAAGA+GGG + chr7_1:77987471-77987490 None:intergenic 50.0%
TCTTTGAGTCGTCCTGCAAG+AGG + chr7_1:77987472-77987491 None:intergenic 50.0%
CATCACCCGAGCATTCGATT+TGG + chr7_1:77987513-77987532 None:intergenic 50.0%
CAAATCGAATGCTCGGGTGA+TGG - chr7_1:77987511-77987530 Msa1040610:CDS 50.0%
GTGGGACTAATAAGCTTGGG+TGG + chr7_1:77987798-77987817 None:intergenic 50.0%
TGTGTGTGTGGGTCTTTAGG+TGG + chr7_1:77988147-77988166 None:intergenic 50.0%
GAGATCCCAATTTCGAACCC+AGG - chr7_1:77988172-77988191 Msa1040610:CDS 50.0%
!! GGATGTGGCGGTTTTGTGAT+AGG - chr7_1:77988411-77988430 Msa1040610:intron 50.0%
AAGAAGTTCCTGTGCCACAC+TGG + chr7_1:77988537-77988556 None:intergenic 50.0%
TACCCGCGGAACAAATCAAC+CGG - chr7_1:77988646-77988665 Msa1040610:intron 50.0%
GTTGAAACTCCCTCTTCAGC+CGG + chr7_1:77988668-77988687 None:intergenic 50.0%
CACGAGCTTCACTTGGGTAT+TGG + chr7_1:77988775-77988794 None:intergenic 50.0%
ATAGACCCTCCTCTACCCAA+TGG - chr7_1:77988819-77988838 Msa1040610:intron 50.0%
CCGTAGAAACCATTGGGTAG+AGG + chr7_1:77988831-77988850 None:intergenic 50.0%
GAAGCTGATCCAAGAAGCGA+AGG - chr7_1:77988926-77988945 Msa1040610:intron 50.0%
! GTAACTTGGCCTTCGCTTCT+TGG + chr7_1:77988938-77988957 None:intergenic 50.0%
TGTTTATGTCTGAGTGGGGG+AGG - chr7_1:77989051-77989070 Msa1040610:CDS 50.0%
GAGGTTGGGATTTGACAACG+TGG - chr7_1:77989070-77989089 Msa1040610:CDS 50.0%
! GACAACGTGGACTATCAGTG+GGG - chr7_1:77989083-77989102 Msa1040610:CDS 50.0%
CAAATCCCTCTGTTTGGGAG+AGG + chr7_1:77989176-77989195 None:intergenic 50.0%
GTAGTAGGGAACGAGTGCCA+AGG + chr7_1:77987449-77987468 None:intergenic 55.0%
GTTCCCTACTACCCTCTTGC+AGG - chr7_1:77987457-77987476 Msa1040610:CDS 55.0%
CGTCCTGCAAGAGGGTAGTA+GGG + chr7_1:77987463-77987482 None:intergenic 55.0%
TCGTCCTGCAAGAGGGTAGT+AGG + chr7_1:77987464-77987483 None:intergenic 55.0%
! AATGCTCGGGTGATGGTGTG+TGG - chr7_1:77987518-77987537 Msa1040610:CDS 55.0%
!! TGGCGGTTTTGTGATAGGCC+TGG - chr7_1:77988416-77988435 Msa1040610:intron 55.0%
AACCCACCATCGAACCAGTG+TGG - chr7_1:77988520-77988539 Msa1040610:intron 55.0%
!! TGCCACACTGGTTCGATGGT+GGG + chr7_1:77988525-77988544 None:intergenic 55.0%
GGCAATGCAGGTGCTTGAGA+GGG + chr7_1:77988561-77988580 None:intergenic 55.0%
TGGCAATGCAGGTGCTTGAG+AGG + chr7_1:77988562-77988581 None:intergenic 55.0%
!! AGCCGGTTGATTTGTTCCGC+GGG + chr7_1:77988651-77988670 None:intergenic 55.0%
!! CAGCCGGTTGATTTGTTCCG+CGG + chr7_1:77988652-77988671 None:intergenic 55.0%
TGGGTAGAGGAGGGTCTATG+AGG + chr7_1:77988818-77988837 None:intergenic 55.0%
ATGAGGCCGTAGTTGTCACC+GGG + chr7_1:77988866-77988885 None:intergenic 55.0%
CATGAGGCCGTAGTTGTCAC+CGG + chr7_1:77988867-77988886 None:intergenic 55.0%
TATGTCTGAGTGGGGGAGGT+TGG - chr7_1:77989055-77989074 Msa1040610:CDS 55.0%
ATGTCTGAGTGGGGGAGGTT+GGG - chr7_1:77989056-77989075 Msa1040610:CDS 55.0%
TGAATGGGGACCACGTGAAC+TGG + chr7_1:77989113-77989132 None:intergenic 55.0%
GTTCACGTGGTCCCCATTCA+AGG - chr7_1:77989113-77989132 Msa1040610:CDS 55.0%
GGTTACATGGTGTGTGGAGG+AGG - chr7_1:77989199-77989218 Msa1040610:CDS 55.0%
GTAGTAGGGAACGAGTGCCA+AGG + chr7_1:77987449-77987468 None:intergenic 55.0%
GTTCCCTACTACCCTCTTGC+AGG - chr7_1:77987457-77987476 Msa1040610:CDS 55.0%
CGTCCTGCAAGAGGGTAGTA+GGG + chr7_1:77987463-77987482 None:intergenic 55.0%
TCGTCCTGCAAGAGGGTAGT+AGG + chr7_1:77987464-77987483 None:intergenic 55.0%
! AATGCTCGGGTGATGGTGTG+TGG - chr7_1:77987518-77987537 Msa1040610:CDS 55.0%
!! TGGCGGTTTTGTGATAGGCC+TGG - chr7_1:77988416-77988435 Msa1040610:intron 55.0%
AACCCACCATCGAACCAGTG+TGG - chr7_1:77988520-77988539 Msa1040610:intron 55.0%
!! TGCCACACTGGTTCGATGGT+GGG + chr7_1:77988525-77988544 None:intergenic 55.0%
GGCAATGCAGGTGCTTGAGA+GGG + chr7_1:77988561-77988580 None:intergenic 55.0%
TGGCAATGCAGGTGCTTGAG+AGG + chr7_1:77988562-77988581 None:intergenic 55.0%
!! AGCCGGTTGATTTGTTCCGC+GGG + chr7_1:77988651-77988670 None:intergenic 55.0%
!! CAGCCGGTTGATTTGTTCCG+CGG + chr7_1:77988652-77988671 None:intergenic 55.0%
TGGGTAGAGGAGGGTCTATG+AGG + chr7_1:77988818-77988837 None:intergenic 55.0%
ATGAGGCCGTAGTTGTCACC+GGG + chr7_1:77988866-77988885 None:intergenic 55.0%
CATGAGGCCGTAGTTGTCAC+CGG + chr7_1:77988867-77988886 None:intergenic 55.0%
TATGTCTGAGTGGGGGAGGT+TGG - chr7_1:77989055-77989074 Msa1040610:CDS 55.0%
ATGTCTGAGTGGGGGAGGTT+GGG - chr7_1:77989056-77989075 Msa1040610:CDS 55.0%
TGAATGGGGACCACGTGAAC+TGG + chr7_1:77989113-77989132 None:intergenic 55.0%
GTTCACGTGGTCCCCATTCA+AGG - chr7_1:77989113-77989132 Msa1040610:CDS 55.0%
GGTTACATGGTGTGTGGAGG+AGG - chr7_1:77989199-77989218 Msa1040610:CDS 55.0%
CGACCCCCTTGTGCAAATGC+AGG - chr7_1:77987654-77987673 Msa1040610:CDS 60.0%
!! GTGCCACACTGGTTCGATGG+TGG + chr7_1:77988526-77988545 None:intergenic 60.0%
!! CCTGTGCCACACTGGTTCGA+TGG + chr7_1:77988529-77988548 None:intergenic 60.0%
CCATCGAACCAGTGTGGCAC+AGG - chr7_1:77988526-77988545 Msa1040610:intron 60.0%
ATGGGGACCACGTGAACTGG+TGG + chr7_1:77989110-77989129 None:intergenic 60.0%
GGCTCTGTCATTGTGCCAGC+TGG - chr7_1:77989134-77989153 Msa1040610:CDS 60.0%
TCGCTGCCTCTCCCAAACAG+AGG - chr7_1:77989167-77989186 Msa1040610:CDS 60.0%
CGCTGCCTCTCCCAAACAGA+GGG - chr7_1:77989168-77989187 Msa1040610:CDS 60.0%
CGACCCCCTTGTGCAAATGC+AGG - chr7_1:77987654-77987673 Msa1040610:CDS 60.0%
!! GTGCCACACTGGTTCGATGG+TGG + chr7_1:77988526-77988545 None:intergenic 60.0%
!! CCTGTGCCACACTGGTTCGA+TGG + chr7_1:77988529-77988548 None:intergenic 60.0%
CCATCGAACCAGTGTGGCAC+AGG - chr7_1:77988526-77988545 Msa1040610:intron 60.0%
ATGGGGACCACGTGAACTGG+TGG + chr7_1:77989110-77989129 None:intergenic 60.0%
GGCTCTGTCATTGTGCCAGC+TGG - chr7_1:77989134-77989153 Msa1040610:CDS 60.0%
TCGCTGCCTCTCCCAAACAG+AGG - chr7_1:77989167-77989186 Msa1040610:CDS 60.0%
CGCTGCCTCTCCCAAACAGA+GGG - chr7_1:77989168-77989187 Msa1040610:CDS 60.0%
GCGGTTGGGGAGCTAGCTAG+AGG - chr7_1:77988489-77988508 Msa1040610:intron 65.0%
GTGGGGTCCACCAGTTCACG+TGG - chr7_1:77989100-77989119 Msa1040610:CDS 65.0%
AGCGAGCGCACAATGCCAGC+TGG + chr7_1:77989152-77989171 None:intergenic 65.0%
GCGGTTGGGGAGCTAGCTAG+AGG - chr7_1:77988489-77988508 Msa1040610:intron 65.0%
GTGGGGTCCACCAGTTCACG+TGG - chr7_1:77989100-77989119 Msa1040610:CDS 65.0%
AGCGAGCGCACAATGCCAGC+TGG + chr7_1:77989152-77989171 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77987199 77989461 77987199 ID=Msa1040610;Name=Msa1040610
chr7_1 mRNA 77987199 77989461 77987199 ID=Msa1040610-mRNA-1;Parent=Msa1040610;Name=Msa1040610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=69|1|1|1|1|1|2|181|429
chr7_1 exon 77987199 77988261 77987199 ID=Msa1040610-mRNA-1:exon:20739;Parent=Msa1040610-mRNA-1
chr7_1 exon 77988985 77989461 77988985 ID=Msa1040610-mRNA-1:exon:20738;Parent=Msa1040610-mRNA-1
chr7_1 five_prime_UTR 77989393 77989461 77989393 ID=Msa1040610-mRNA-1:five_prime_utr;Parent=Msa1040610-mRNA-1
chr7_1 CDS 77988985 77989392 77988985 ID=Msa1040610-mRNA-1:cds;Parent=Msa1040610-mRNA-1
chr7_1 CDS 77987380 77988261 77987380 ID=Msa1040610-mRNA-1:cds;Parent=Msa1040610-mRNA-1
chr7_1 three_prime_UTR 77987199 77987379 77987199 ID=Msa1040610-mRNA-1:three_prime_utr;Parent=Msa1040610-mRNA-1
Gene Sequence

>Msa1040610

ATGGAAATATCAGTGATTAGAACAAAACGAGACTTAGTTAAACCAGCCAAGAAGACCCCATTAGTCACGTTAGACATGTCAGTAATCAACAAACTACCTGTTCTAAAATGCTATGTTAGAACTTTGCATGTGTTTAGACATGGTCCTAAAGCAGCAAGGGTCATAAGAGAAGCATTGTCCTTGGCACTCGTTCCCTACTACCCTCTTGCAGGACGACTCAAAGAGTCTAATCCGCAGTGTCTCCAAATCGAATGCTCGGGTGATGGTGTGTGGTATGTTGAGGCATCAACTAATTGCACACTTGACTCTGTCAATTTCTTTGATGACATGGAGTCTATTCCATATGGTAGTCTTTTTCCAGATAATGTTCACGAGATCGAACACATCGACCCCCTTGTGCAAATGCAGGTGACACAATTTGGATGTGGCGGTTTTGTGATAGGCCTGGTATTCAGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCGGTTGGGGAGCTAGCTAGAGGACTTGACAAACCCACCATCGAACCAGTGTGGCACAGGAACTTCTTTCCCTCTCAAGCACCTGCATTGCCAAAACTATCTCGTACAGATCCACCTCAATTGCCATGCTACAAGCTAGAGCATTCTAACATAGACATACCCGCGGAACAAATCAACCGGCTGAAGAGGGAGTTTCAACAAGTAGCTGGAAGAAGTTGTTCTACCTTTGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATTAATTTTGATCCCAATACCCAAGTGAAGCTCGTGTTCTTTGCAAATTGTCGACACCTCATAGACCCTCCTCTACCCAATGGTTTCTACGGAAACTGTTTCTTCCCGGTGACAACTACGGCCTCATGCGAGTCACTTAGAATAGCACCAAATATCATTAAGGTGGTGAAGCTGATCCAAGAAGCGAAGGCCAAGTTACCTACAGAGTTCGTTAAGTACTTGAAGGGTGAACATGTAAAAGTTGGTGATGAGTTTGAGGACCCGTTTGCACCTACACCAAATTACGCCACACTGTTTATGTCTGAGTGGGGGAGGTTGGGATTTGACAACGTGGACTATCAGTGGGGTCCACCAGTTCACGTGGTCCCCATTCAAGGCTCTGTCATTGTGCCAGCTGGCATTGTGCGCTCGCTGCCTCTCCCAAACAGAGGGATTTGTTTGGTTACATGGTGTGTGGAGGAGGCACATCGCCTTCCCTTCATTGATCAAATTCATGGTCTTATAAATAAGCCACTATTATAA
Protein sequence

>Msa1040610

MEISVIRTKRDLVKPAKKTPLVTLDMSVINKLPVLKCYVRTLHVFRHGPKAARVIREALSLALVPYYPLAGRLKESNPQCLQIECSGDGVWYVEASTNCTLDSVNFFDDMESIPYGSLFPDNVHEIEHIDPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIEPVWHRNFFPSQAPALPKLSRTDPPQLPCYKLEHSNIDIPAEQINRLKREFQQVAGRSCSTFEIVAALFWSSRTRAINFDPNTQVKLVFFANCRHLIDPPLPNGFYGNCFFPVTTTASCESLRIAPNIIKVVKLIQEAKAKLPTEFVKYLKGEHVKVGDEFEDPFAPTPNYATLFMSEWGRLGFDNVDYQWGPPVHVVPIQGSVIVPAGIVRSLPLPNRGICLVTWCVEEAHRLPFIDQIHGLINKPLL*