Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041150 | XP_039684274.1 | 91.004 | 667 | 41 | 5 | 1 | 664 | 1 | 651 | 0.0 | 1164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041150 | sp|F4HXL0|PLIP2_ARATH | 52.263 | 729 | 247 | 19 | 1 | 659 | 1 | 698 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041150 | G7KSR9 | 90.855 | 667 | 47 | 5 | 1 | 664 | 1 | 656 | 0.0 | 1160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1041150 | Msa1082310 | 0.851183 | 1.047642e-60 | -8.615850e-47 |
| Msa1041150 | Msa1127180 | 0.942017 | 1.510748e-101 | -8.615850e-47 |
| Msa1041150 | Msa1362010 | 0.942696 | 4.543954e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041150 | MtrunA17_Chr7g0269851 | 88.389 | 689 | 51 | 6 | 1 | 664 | 1 | 685 | 0.0 | 1157 |
| Msa1041150 | MtrunA17_Chr1g0194901 | 59.748 | 713 | 204 | 16 | 1 | 659 | 1 | 684 | 0.0 | 779 |
| Msa1041150 | MtrunA17_Chr7g0275571 | 41.652 | 581 | 262 | 14 | 73 | 601 | 113 | 668 | 8.13e-127 | 391 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041150 | AT1G02660.1 | 52.263 | 729 | 247 | 19 | 1 | 659 | 1 | 698 | 0.0 | 618 |
| Msa1041150 | AT3G62590.1 | 51.223 | 613 | 219 | 9 | 68 | 659 | 72 | 625 | 0.0 | 544 |
| Msa1041150 | AT3G61680.2 | 46.729 | 535 | 242 | 11 | 83 | 600 | 120 | 628 | 1.38e-145 | 438 |
| Msa1041150 | AT3G61680.1 | 46.729 | 535 | 242 | 11 | 83 | 600 | 120 | 628 | 1.38e-145 | 438 |
| Msa1041150 | AT3G61680.3 | 46.729 | 535 | 242 | 11 | 83 | 600 | 120 | 628 | 1.38e-145 | 438 |
Find 153 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGGCCAGGCAATTGTTTC+TGG | 0.131284 | 7_1:-78675944 | None:intergenic |
| CATGTCTCACTTGGGGAATT+TGG | 0.213240 | 7_1:+78676242 | Msa1041150:CDS |
| TCCTTGCTGCCGTGCGGATT+TGG | 0.226066 | 7_1:-78678483 | None:intergenic |
| TGCGGATTTGGCTGAGTTCT+TGG | 0.237935 | 7_1:-78678471 | None:intergenic |
| CGTTTCACTGGCCATTCTCT+TGG | 0.258914 | 7_1:+78677697 | Msa1041150:CDS |
| CCAGCTCAAAGCTGCTAAAT+TGG | 0.265066 | 7_1:+78678324 | Msa1041150:CDS |
| CAAAGACATGAAAGCATAAA+AGG | 0.269225 | 7_1:-78676308 | None:intergenic |
| GATGAAATAAACCTTGATAT+TGG | 0.297573 | 7_1:-78676277 | None:intergenic |
| GAAGAAGGAGATGGACAAAA+TGG | 0.299306 | 7_1:+78676003 | Msa1041150:CDS |
| AGTAATTCTGCGACATGGTT+AGG | 0.309991 | 7_1:-78677928 | None:intergenic |
| GTTTCACTGGCCATTCTCTT+GGG | 0.310775 | 7_1:+78677698 | Msa1041150:CDS |
| TTGCTTCCTGTGGTAACCTT+TGG | 0.325594 | 7_1:+78677784 | Msa1041150:CDS |
| ATGAAATAAACCTTGATATT+GGG | 0.350525 | 7_1:-78676276 | None:intergenic |
| ACAGGAAGCAAAGAAGAAAT+AGG | 0.368214 | 7_1:-78677772 | None:intergenic |
| AGTCCTTGAAAAGGTTTAGT+AGG | 0.369572 | 7_1:+78678647 | Msa1041150:CDS |
| AACTGACGTTGGGTCTTTGA+TGG | 0.377743 | 7_1:+78677018 | Msa1041150:CDS |
| TTATTACAAAGTGGGATTCC+TGG | 0.377761 | 7_1:+78675781 | Msa1041150:CDS |
| ACAAGGATGACTGCGGAAAC+TGG | 0.384297 | 7_1:-78677965 | None:intergenic |
| GCAGTAATAGAAGTGATTAA+AGG | 0.396032 | 7_1:-78675811 | None:intergenic |
| TAAATCTTATGCTGTTGATA+AGG | 0.405800 | 7_1:+78677740 | Msa1041150:CDS |
| ACCTAAAATCTCAAGGTTCT+CGG | 0.414863 | 7_1:+78677665 | Msa1041150:CDS |
| TGTCTGTTTAATCCCTGAAA+AGG | 0.415869 | 7_1:-78678617 | None:intergenic |
| CGGGCAACTTTCCGTTTCAC+TGG | 0.425212 | 7_1:+78677685 | Msa1041150:CDS |
| AACAACCGCTGTCATTGAAT+TGG | 0.425475 | 7_1:-78677047 | None:intergenic |
| GAGATGGACAAAATGGGAAC+TGG | 0.438740 | 7_1:+78676010 | Msa1041150:CDS |
| CTTAATATCTCGAGGGGATG+TGG | 0.443615 | 7_1:-78678361 | None:intergenic |
| TTCTCCGGCATCTTTCCCAT+TGG | 0.445792 | 7_1:-78676876 | None:intergenic |
| CCTGGCCGTCGACGAGGTTA+CGG | 0.447816 | 7_1:+78675957 | Msa1041150:CDS |
| ACAATTACCTCAAATTGAAC+TGG | 0.447991 | 7_1:-78677406 | None:intergenic |
| CAGCCTCATAGATACCTCTA+TGG | 0.448318 | 7_1:-78677600 | None:intergenic |
| CAAGTTCTTCACCCTGTGAA+TGG | 0.449149 | 7_1:+78677119 | Msa1041150:CDS |
| TGTGAGATTGCAGTGGTTGA+AGG | 0.449691 | 7_1:+78676947 | Msa1041150:CDS |
| GTAATTCTGCGACATGGTTA+GGG | 0.460593 | 7_1:-78677927 | None:intergenic |
| CCTAAAATCTCAAGGTTCTC+GGG | 0.463443 | 7_1:+78677666 | Msa1041150:CDS |
| ATCAATAGAGAAGAAGGAAC+TGG | 0.468428 | 7_1:+78676829 | Msa1041150:CDS |
| ATACTCTATTCCCAATATCA+AGG | 0.470253 | 7_1:+78676266 | Msa1041150:CDS |
| TTTCACTGGCCATTCTCTTG+GGG | 0.474247 | 7_1:+78677699 | Msa1041150:CDS |
| CCAATTTAGCAGCTTTGAGC+TGG | 0.478041 | 7_1:-78678324 | None:intergenic |
| CTACAAACAGTTGCATATGT+TGG | 0.479518 | 7_1:-78678681 | None:intergenic |
| GACCGATCCGCCTATGGACC+TGG | 0.482864 | 7_1:+78678385 | Msa1041150:CDS |
| CCGTAACCTCGTCGACGGCC+AGG | 0.484027 | 7_1:-78675957 | None:intergenic |
| TACAAACAGTTGCATATGTT+GGG | 0.484145 | 7_1:-78678680 | None:intergenic |
| TATGAATCTGTAAAACTTGG+AGG | 0.485150 | 7_1:-78675911 | None:intergenic |
| AGCCAGGGAACCTCTTGAAA+AGG | 0.486455 | 7_1:+78676783 | Msa1041150:intron |
| TCTTAATTCTGTATGGAAAG+AGG | 0.488435 | 7_1:+78676050 | Msa1041150:CDS |
| CATGTCATGATCTCTGTGTA+TGG | 0.489901 | 7_1:-78678413 | None:intergenic |
| GTATCTATGAGGCTGCTAAA+GGG | 0.492305 | 7_1:+78677608 | Msa1041150:CDS |
| CACCTCCACACATGATGGAC+GGG | 0.493139 | 7_1:-78677810 | None:intergenic |
| TTAAGTGACCGATCCGCCTA+TGG | 0.498782 | 7_1:+78678379 | Msa1041150:CDS |
| GTAAACAGAGTTGTGGAAGA+AGG | 0.499077 | 7_1:+78675988 | Msa1041150:CDS |
| ACCTATGAATCTGTAAAACT+TGG | 0.499685 | 7_1:-78675914 | None:intergenic |
| GTTCAGAGTCATTTGAATCC+TGG | 0.500446 | 7_1:+78677362 | Msa1041150:CDS |
| CAAGAGAATGGCCAGTGAAA+CGG | 0.500612 | 7_1:-78677696 | None:intergenic |
| TATTTCTTCTTTGCTTCCTG+TGG | 0.504548 | 7_1:+78677774 | Msa1041150:CDS |
| GAAAGCATAAAAGGAAATGA+AGG | 0.504951 | 7_1:-78676299 | None:intergenic |
| GGTATCTATGAGGCTGCTAA+AGG | 0.505259 | 7_1:+78677607 | Msa1041150:CDS |
| GTGTTCTTGCTTCCTACTCT+CGG | 0.506196 | 7_1:+78678703 | Msa1041150:CDS |
| CAGGTAGAAAGTCCTTGAAA+AGG | 0.511559 | 7_1:+78678638 | Msa1041150:CDS |
| GCTGAGTTCTTGGCGAATCA+CGG | 0.511618 | 7_1:-78678461 | None:intergenic |
| GAAAGAAAAGAGGAAAAGAA+TGG | 0.514106 | 7_1:+78676896 | Msa1041150:CDS |
| AAAGGTGCGGTGGCCTCTTG+TGG | 0.515177 | 7_1:+78678519 | Msa1041150:CDS |
| TATGGCTCCTCCAGGTCCAT+AGG | 0.518076 | 7_1:-78678395 | None:intergenic |
| CTTTGTGTTTATTACAAAGT+GGG | 0.518264 | 7_1:+78675773 | Msa1041150:CDS |
| GTCTGTTTAATCCCTGAAAA+GGG | 0.519128 | 7_1:-78678616 | None:intergenic |
| GTCACATATGAACCATTCAC+AGG | 0.527693 | 7_1:-78677131 | None:intergenic |
| AACTTCATCAATAGAGAAGA+AGG | 0.527755 | 7_1:+78676823 | Msa1041150:CDS |
| TAGCCATCATCTTCTTCCAC+CGG | 0.535478 | 7_1:+78678243 | Msa1041150:CDS |
| GTAAGTGATGCGGACATTGT+TGG | 0.536188 | 7_1:+78678550 | Msa1041150:CDS |
| TTTAGGTGAGCATGAACCTC+GGG | 0.536388 | 7_1:-78677649 | None:intergenic |
| CTCCAGGTCCATAGGCGGAT+CGG | 0.536666 | 7_1:-78678387 | None:intergenic |
| TTAAGAAAGAAGAAACCAAT+GGG | 0.538108 | 7_1:+78676861 | Msa1041150:CDS |
| TAATCCCTGAAAAGGGAGGC+TGG | 0.541253 | 7_1:-78678609 | None:intergenic |
| CCATGTCGCAGAATTACTAA+AGG | 0.544242 | 7_1:+78677933 | Msa1041150:CDS |
| ACGATCACCTCCACACATGA+TGG | 0.544848 | 7_1:-78677815 | None:intergenic |
| ATGCACGTGAACGTGATCAT+TGG | 0.546832 | 7_1:-78675851 | None:intergenic |
| GAAGCTGCTATATGCACCGA+TGG | 0.548227 | 7_1:+78678180 | Msa1041150:intron |
| AGAGTCATTTGAATCCTGGC+AGG | 0.551210 | 7_1:+78677366 | Msa1041150:CDS |
| GTATGCACACATGTCTCACT+TGG | 0.551229 | 7_1:+78676233 | Msa1041150:CDS |
| GAAACCAATGGGAAAGATGC+CGG | 0.552736 | 7_1:+78676872 | Msa1041150:CDS |
| AAGAAGGAGATGGACAAAAT+GGG | 0.557833 | 7_1:+78676004 | Msa1041150:CDS |
| CTCCGCCAGAAACAATTGCC+TGG | 0.558127 | 7_1:+78675939 | Msa1041150:CDS |
| CCTTTAGTAATTCTGCGACA+TGG | 0.559948 | 7_1:-78677933 | None:intergenic |
| GTGATTAAAGGAACGATACC+AGG | 0.560094 | 7_1:-78675799 | None:intergenic |
| GCCAAATCCGCACGGCAGCA+AGG | 0.565559 | 7_1:+78678482 | Msa1041150:CDS |
| TCTTATGCTGTTGATAAGGA+AGG | 0.566630 | 7_1:+78677744 | Msa1041150:CDS |
| ATTAAGAAAGAAGAAACCAA+TGG | 0.569071 | 7_1:+78676860 | Msa1041150:CDS |
| GATCGTCTGCTCGAAAAGCT+AGG | 0.570026 | 7_1:+78677832 | Msa1041150:CDS |
| TCTCTGTGTATGGCTCCTCC+AGG | 0.571504 | 7_1:-78678403 | None:intergenic |
| TATGCACACATGTCTCACTT+GGG | 0.573102 | 7_1:+78676234 | Msa1041150:CDS |
| CATGATGGACGGGGAGCCAA+AGG | 0.574571 | 7_1:-78677800 | None:intergenic |
| CATTGTTGGTGGGAGATCCA+TGG | 0.578805 | 7_1:+78678564 | Msa1041150:CDS |
| TTCACTGGCCATTCTCTTGG+GGG | 0.579207 | 7_1:+78677700 | Msa1041150:CDS |
| ATCGGTCACTTAATATCTCG+AGG | 0.582626 | 7_1:-78678369 | None:intergenic |
| GGCCAGGCAATTGTTTCTGG+CGG | 0.586577 | 7_1:-78675941 | None:intergenic |
| ACTTTGTGTTTATTACAAAG+TGG | 0.587222 | 7_1:+78675772 | Msa1041150:CDS |
| CATGCTCACCTAAAATCTCA+AGG | 0.588915 | 7_1:+78677658 | Msa1041150:CDS |
| GAGGCTGGTCTTGAATAATA+CGG | 0.591656 | 7_1:-78678594 | None:intergenic |
| AGTTATATGTTTCCGAGAGT+AGG | 0.593280 | 7_1:-78678715 | None:intergenic |
| CATTTGATTCTGAAAGAAGA+GGG | 0.594352 | 7_1:-78678291 | None:intergenic |
| TCACCTCCACACATGATGGA+CGG | 0.595113 | 7_1:-78677811 | None:intergenic |
| AGAGTTGTGGAAGAAGGAGA+TGG | 0.596023 | 7_1:+78675994 | Msa1041150:CDS |
| TGTTTGTAGAGTTGATGAAG+AGG | 0.596553 | 7_1:+78676110 | Msa1041150:CDS |
| TCATTTGATTCTGAAAGAAG+AGG | 0.596751 | 7_1:-78678292 | None:intergenic |
| GGCTCCCCGTCCATCATGTG+TGG | 0.599550 | 7_1:+78677805 | Msa1041150:CDS |
| GCACAGAGACATAGTACCAC+GGG | 0.600168 | 7_1:+78677888 | Msa1041150:CDS |
| CTCCGCCGTAACCTCGTCGA+CGG | 0.603252 | 7_1:-78675962 | None:intergenic |
| AGATGCCGGAGAAAGAAAAG+AGG | 0.605156 | 7_1:+78676886 | Msa1041150:CDS |
| TACCCGGTGGAAGAAGATGA+TGG | 0.607656 | 7_1:-78678246 | None:intergenic |
| AAGCTGCTATATGCACCGAT+GGG | 0.608378 | 7_1:+78678181 | Msa1041150:CDS |
| AGAATCAGTAATTCGCCCAT+CGG | 0.612468 | 7_1:-78678196 | None:intergenic |
| CAATTGCCTGGCCGTCGACG+AGG | 0.614272 | 7_1:+78675951 | Msa1041150:CDS |
| GGGAACCTCTTGAAAAGGTG+TGG | 0.615583 | 7_1:+78676788 | Msa1041150:CDS |
| AAGGAGAGAACTAAGACGAA+AGG | 0.616416 | 7_1:+78678501 | Msa1041150:CDS |
| CATAGATACCTCTATGGACA+AGG | 0.616860 | 7_1:-78677594 | None:intergenic |
| AGTGATGCGGACATTGTTGG+TGG | 0.617441 | 7_1:+78678553 | Msa1041150:CDS |
| GGCTCCTCCAGGTCCATAGG+CGG | 0.617601 | 7_1:-78678392 | None:intergenic |
| CTTACACTTCGTGCCACAAG+AGG | 0.618198 | 7_1:-78678532 | None:intergenic |
| GGTGGAAGAAGATGATGGCT+AGG | 0.619407 | 7_1:-78678241 | None:intergenic |
| AACTAAGACGAAAGGTGCGG+TGG | 0.620457 | 7_1:+78678509 | Msa1041150:CDS |
| AGCCATCATCTTCTTCCACC+GGG | 0.620848 | 7_1:+78678244 | Msa1041150:CDS |
| TGTCCATAGAGGTATCTATG+AGG | 0.623935 | 7_1:+78677597 | Msa1041150:CDS |
| GCATCAATCTCACGTGAGCA+CGG | 0.629640 | 7_1:+78675870 | Msa1041150:CDS |
| TCGGTCACTTAATATCTCGA+GGG | 0.631519 | 7_1:-78678368 | None:intergenic |
| AGATGGACAAAATGGGAACT+GGG | 0.633266 | 7_1:+78676011 | Msa1041150:CDS |
| TTAGATGTCCTTGTCCATAG+AGG | 0.637092 | 7_1:+78677586 | Msa1041150:CDS |
| AATAATACGGACAGATACCA+TGG | 0.637561 | 7_1:-78678581 | None:intergenic |
| GGGGAGCCAAAGGTTACCAC+AGG | 0.637612 | 7_1:-78677790 | None:intergenic |
| TCCCCGTCCATCATGTGTGG+AGG | 0.638035 | 7_1:+78677808 | Msa1041150:CDS |
| TTTACTTGGTTATTAAGACA+AGG | 0.638155 | 7_1:-78677982 | None:intergenic |
| CGATCCGCCTATGGACCTGG+AGG | 0.638363 | 7_1:+78678388 | Msa1041150:CDS |
| CGGTCACTTAATATCTCGAG+GGG | 0.642028 | 7_1:-78678367 | None:intergenic |
| TGATGCTTGTGAGATTGCAG+TGG | 0.646322 | 7_1:+78676940 | Msa1041150:CDS |
| AGAACTCAGCCAAATCCGCA+CGG | 0.648030 | 7_1:+78678474 | Msa1041150:CDS |
| GGAGAATGTAAACAGAGTTG+TGG | 0.651308 | 7_1:+78675981 | Msa1041150:CDS |
| GTTCTCTCCTTGCTGCCGTG+CGG | 0.651475 | 7_1:-78678489 | None:intergenic |
| GGCCGTCGACGAGGTTACGG+CGG | 0.651522 | 7_1:+78675960 | Msa1041150:CDS |
| ACCTCCACACATGATGGACG+GGG | 0.657981 | 7_1:-78677809 | None:intergenic |
| ATGCACACATGTCTCACTTG+GGG | 0.665122 | 7_1:+78676235 | Msa1041150:CDS |
| TACTTGCATGAAAATGCCCG+TGG | 0.685103 | 7_1:-78677904 | None:intergenic |
| TGCACAGAGACATAGTACCA+CGG | 0.687263 | 7_1:+78677887 | Msa1041150:CDS |
| AACTACCAATTCAATGACAG+CGG | 0.687266 | 7_1:+78677042 | Msa1041150:CDS |
| TGTTTAATCCCTGAAAAGGG+AGG | 0.687911 | 7_1:-78678613 | None:intergenic |
| GTGATGCGGACATTGTTGGT+GGG | 0.700714 | 7_1:+78678554 | Msa1041150:CDS |
| AATCTCACGTGAGCACGGTG+AGG | 0.702468 | 7_1:+78675875 | Msa1041150:CDS |
| ATTCCTTGAACGTGACTCCG+CGG | 0.708794 | 7_1:-78677859 | None:intergenic |
| GAGAACTAAGACGAAAGGTG+CGG | 0.711212 | 7_1:+78678506 | Msa1041150:CDS |
| TATTAAGACAAGGATGACTG+CGG | 0.711381 | 7_1:-78677972 | None:intergenic |
| TCACATATGAACCATTCACA+GGG | 0.713581 | 7_1:-78677130 | None:intergenic |
| GGCACGAAGTGTAAGTGATG+CGG | 0.720051 | 7_1:+78678540 | Msa1041150:CDS |
| AAAAGATATAGACCACTACC+CGG | 0.728169 | 7_1:-78678262 | None:intergenic |
| AGATATAGACCACTACCCGG+TGG | 0.732749 | 7_1:-78678259 | None:intergenic |
| TCGAAAAGCTAGGTTTACCG+CGG | 0.741792 | 7_1:+78677842 | Msa1041150:CDS |
| ATATCAACAGATGTTACCCG+AGG | 0.747249 | 7_1:+78677633 | Msa1041150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACTTATATTTAACAC+CGG | - | chr7_1:78678034-78678053 | None:intergenic | 15.0% |
| !!! | TCATTAAGATTTAAAATCAA+AGG | - | chr7_1:78678147-78678166 | None:intergenic | 15.0% |
| !!! | TTTTTGATCTTAATTCTGTA+TGG | + | chr7_1:78676043-78676062 | Msa1041150:CDS | 20.0% |
| !! | ATGAAATAAACCTTGATATT+GGG | - | chr7_1:78676279-78676298 | None:intergenic | 20.0% |
| !! | TTTATACATTAGGAATGTTT+AGG | + | chr7_1:78676340-78676359 | Msa1041150:intron | 20.0% |
| !! | ATTAAAAATGATAGCAAGTT+TGG | + | chr7_1:78677291-78677310 | Msa1041150:intron | 20.0% |
| !!! | AGATACATTTTTTTTTCCTT+AGG | + | chr7_1:78677561-78677580 | Msa1041150:intron | 20.0% |
| !!! | GATACATTTTTTTTTCCTTA+GGG | + | chr7_1:78677562-78677581 | Msa1041150:intron | 20.0% |
| !!! | ATACATTTTTTTTTCCTTAG+GGG | + | chr7_1:78677563-78677582 | Msa1041150:intron | 20.0% |
| ! | ACTTTGTGTTTATTACAAAG+TGG | + | chr7_1:78675772-78675791 | Msa1041150:CDS | 25.0% |
| ! | CTTTGTGTTTATTACAAAGT+GGG | + | chr7_1:78675773-78675792 | Msa1041150:CDS | 25.0% |
| ! | GATGAAATAAACCTTGATAT+TGG | - | chr7_1:78676280-78676299 | None:intergenic | 25.0% |
| !! | TACAAAAACCTTCATAGTTT+TGG | + | chr7_1:78676378-78676397 | Msa1041150:intron | 25.0% |
| !!! | CATTATTTTTGTACTTTGAG+TGG | + | chr7_1:78676670-78676689 | Msa1041150:intron | 25.0% |
| !!! | TGCTATGCTAATTTGTATTT+TGG | + | chr7_1:78676748-78676767 | Msa1041150:intron | 25.0% |
| ! | ATTAAGAAAGAAGAAACCAA+TGG | + | chr7_1:78676860-78676879 | Msa1041150:CDS | 25.0% |
| ! | TTAAGAAAGAAGAAACCAAT+GGG | + | chr7_1:78676861-78676880 | Msa1041150:CDS | 25.0% |
| !!! | TACGAGATATTTTGTTATTC+AGG | + | chr7_1:78677168-78677187 | Msa1041150:CDS | 25.0% |
| ! | ATGTTATGTGAATAATCACA+AGG | - | chr7_1:78677257-78677276 | None:intergenic | 25.0% |
| !!! | AGCAAGTTTGGATTTATTTT+TGG | + | chr7_1:78677303-78677322 | Msa1041150:intron | 25.0% |
| ! | GTATCAAAACAATAATTGGT+TGG | - | chr7_1:78677337-78677356 | None:intergenic | 25.0% |
| !!! | AATTATTGTTTTGATACGCA+GGG | + | chr7_1:78677340-78677359 | Msa1041150:intron | 25.0% |
| ! | TGTTTACACTTTGTGAAATT+GGG | + | chr7_1:78677532-78677551 | Msa1041150:intron | 25.0% |
| ! | TAAATCTTATGCTGTTGATA+AGG | + | chr7_1:78677740-78677759 | Msa1041150:CDS | 25.0% |
| ! | TTTACTTGGTTATTAAGACA+AGG | - | chr7_1:78677985-78678004 | None:intergenic | 25.0% |
| !! | ATTATCTGAAATACTTCATC+CGG | + | chr7_1:78678012-78678031 | Msa1041150:intron | 25.0% |
| ! | AACTACAAAAAGAATATCTC+TGG | - | chr7_1:78678118-78678137 | None:intergenic | 25.0% |
| GCAGTAATAGAAGTGATTAA+AGG | - | chr7_1:78675814-78675833 | None:intergenic | 30.0% | |
| TATGAATCTGTAAAACTTGG+AGG | - | chr7_1:78675914-78675933 | None:intergenic | 30.0% | |
| ! | TCCAAGTTTTACAGATTCAT+AGG | + | chr7_1:78675913-78675932 | Msa1041150:CDS | 30.0% |
| ACCTATGAATCTGTAAAACT+TGG | - | chr7_1:78675917-78675936 | None:intergenic | 30.0% | |
| TCTTAATTCTGTATGGAAAG+AGG | + | chr7_1:78676050-78676069 | Msa1041150:CDS | 30.0% | |
| ATACTCTATTCCCAATATCA+AGG | + | chr7_1:78676266-78676285 | Msa1041150:CDS | 30.0% | |
| ! | GAAAGCATAAAAGGAAATGA+AGG | - | chr7_1:78676302-78676321 | None:intergenic | 30.0% |
| ! | CAAAGACATGAAAGCATAAA+AGG | - | chr7_1:78676311-78676330 | None:intergenic | 30.0% |
| GTGCACTTTCTTTATACATT+AGG | + | chr7_1:78676330-78676349 | Msa1041150:intron | 30.0% | |
| TATCAATGCCAAAACTATGA+AGG | - | chr7_1:78676389-78676408 | None:intergenic | 30.0% | |
| !!! | TCATAGTTTTGGCATTGATA+AGG | + | chr7_1:78676389-78676408 | Msa1041150:intron | 30.0% |
| ! | AGCATAGCAATCCTAATTTT+GGG | - | chr7_1:78676737-78676756 | None:intergenic | 30.0% |
| ! | TAGCATAGCAATCCTAATTT+TGG | - | chr7_1:78676738-78676757 | None:intergenic | 30.0% |
| AACTTCATCAATAGAGAAGA+AGG | + | chr7_1:78676823-78676842 | Msa1041150:CDS | 30.0% | |
| GAAAGAAAAGAGGAAAAGAA+TGG | + | chr7_1:78676896-78676915 | Msa1041150:CDS | 30.0% | |
| AACATGATAAAAACTGACGT+TGG | + | chr7_1:78677007-78677026 | Msa1041150:CDS | 30.0% | |
| ACATGATAAAAACTGACGTT+GGG | + | chr7_1:78677008-78677027 | Msa1041150:CDS | 30.0% | |
| TTCAGGTATGAAAAATTAGC+AGG | + | chr7_1:78677185-78677204 | Msa1041150:intron | 30.0% | |
| TCAGGTATGAAAAATTAGCA+GGG | + | chr7_1:78677186-78677205 | Msa1041150:intron | 30.0% | |
| CTGCGTATCAAAACAATAAT+TGG | - | chr7_1:78677341-78677360 | None:intergenic | 30.0% | |
| !!! | CAATTATTGTTTTGATACGC+AGG | + | chr7_1:78677339-78677358 | Msa1041150:intron | 30.0% |
| ACAATTACCTCAAATTGAAC+TGG | - | chr7_1:78677409-78677428 | None:intergenic | 30.0% | |
| AAATTCATCCCTTTAACAAG+AGG | - | chr7_1:78677469-78677488 | None:intergenic | 30.0% | |
| GTGTTTACACTTTGTGAAAT+TGG | + | chr7_1:78677531-78677550 | Msa1041150:intron | 30.0% | |
| GGTCGTATGTATAAGTAAAA+AGG | - | chr7_1:78678097-78678116 | None:intergenic | 30.0% | |
| ! | CTAGGTGAAAAATTTTCATC+TGG | - | chr7_1:78678226-78678245 | None:intergenic | 30.0% |
| ! | CATTTGATTCTGAAAGAAGA+GGG | - | chr7_1:78678294-78678313 | None:intergenic | 30.0% |
| ! | TCATTTGATTCTGAAAGAAG+AGG | - | chr7_1:78678295-78678314 | None:intergenic | 30.0% |
| TACAAACAGTTGCATATGTT+GGG | - | chr7_1:78678683-78678702 | None:intergenic | 30.0% | |
| TTATTACAAAGTGGGATTCC+TGG | + | chr7_1:78675781-78675800 | Msa1041150:CDS | 35.0% | |
| AAGAAGGAGATGGACAAAAT+GGG | + | chr7_1:78676004-78676023 | Msa1041150:CDS | 35.0% | |
| TGGAAAGAGGAAAAAAAGAG+TGG | + | chr7_1:78676063-78676082 | Msa1041150:CDS | 35.0% | |
| !! | TGTTTGTAGAGTTGATGAAG+AGG | + | chr7_1:78676110-78676129 | Msa1041150:CDS | 35.0% |
| !!! | GTTTTCTAGAATGCTTCGTA+GGG | + | chr7_1:78676188-78676207 | Msa1041150:CDS | 35.0% |
| GCATTTATATGCCACACTAA+AGG | + | chr7_1:78676411-78676430 | Msa1041150:intron | 35.0% | |
| ! | GTGTTTGATACCTGATTTGT+AGG | + | chr7_1:78676531-78676550 | Msa1041150:intron | 35.0% |
| AAACATGCAATCTTAGAGCA+AGG | - | chr7_1:78676571-78676590 | None:intergenic | 35.0% | |
| ! | TTTGTGACCTGATTGATGAT+CGG | + | chr7_1:78676605-78676624 | Msa1041150:intron | 35.0% |
| CTATATTCCGATCATCAATC+AGG | - | chr7_1:78676615-78676634 | None:intergenic | 35.0% | |
| TTGAGTGGAATTCAATTGTG+TGG | + | chr7_1:78676685-78676704 | Msa1041150:intron | 35.0% | |
| GAATGTGTTCACCCAAAATT+AGG | + | chr7_1:78676723-78676742 | Msa1041150:intron | 35.0% | |
| ATCAATAGAGAAGAAGGAAC+TGG | + | chr7_1:78676829-78676848 | Msa1041150:CDS | 35.0% | |
| ! | CTTTTCCTCTTTTCTTTCTC+CGG | - | chr7_1:78676894-78676913 | None:intergenic | 35.0% |
| AACTACCAATTCAATGACAG+CGG | + | chr7_1:78677042-78677061 | Msa1041150:CDS | 35.0% | |
| TCACATATGAACCATTCACA+GGG | - | chr7_1:78677133-78677152 | None:intergenic | 35.0% | |
| CAGGTATGAAAAATTAGCAG+GGG | + | chr7_1:78677187-78677206 | Msa1041150:intron | 35.0% | |
| ! | ATTGAACTGGCTCAAAAAGT+AGG | - | chr7_1:78677396-78677415 | None:intergenic | 35.0% |
| ! | TTTTGAGCCAGTTCAATTTG+AGG | + | chr7_1:78677399-78677418 | Msa1041150:CDS | 35.0% |
| GAGGTAATTGTTACTATTGC+AGG | + | chr7_1:78677418-78677437 | Msa1041150:intron | 35.0% | |
| ATGCGATTCCTCTTGTTAAA+GGG | + | chr7_1:78677458-78677477 | Msa1041150:intron | 35.0% | |
| ACCTAAAATCTCAAGGTTCT+CGG | + | chr7_1:78677665-78677684 | Msa1041150:CDS | 35.0% | |
| ! | TCTTATGCTGTTGATAAGGA+AGG | + | chr7_1:78677744-78677763 | Msa1041150:CDS | 35.0% |
| ACAGGAAGCAAAGAAGAAAT+AGG | - | chr7_1:78677775-78677794 | None:intergenic | 35.0% | |
| TATTTCTTCTTTGCTTCCTG+TGG | + | chr7_1:78677774-78677793 | Msa1041150:CDS | 35.0% | |
| TATTAAGACAAGGATGACTG+CGG | - | chr7_1:78677975-78677994 | None:intergenic | 35.0% | |
| AGATAATGTCGCACTTTACT+TGG | - | chr7_1:78677999-78678018 | None:intergenic | 35.0% | |
| AAAAGATATAGACCACTACC+CGG | - | chr7_1:78678265-78678284 | None:intergenic | 35.0% | |
| ! | AGTGGTCTATATCTTTTGAG+TGG | + | chr7_1:78678268-78678287 | Msa1041150:CDS | 35.0% |
| AATAATACGGACAGATACCA+TGG | - | chr7_1:78678584-78678603 | None:intergenic | 35.0% | |
| GTCTGTTTAATCCCTGAAAA+GGG | - | chr7_1:78678619-78678638 | None:intergenic | 35.0% | |
| TGTCTGTTTAATCCCTGAAA+AGG | - | chr7_1:78678620-78678639 | None:intergenic | 35.0% | |
| !! | TTTTCAGGGATTAAACAGAC+AGG | + | chr7_1:78678619-78678638 | Msa1041150:CDS | 35.0% |
| AGTCCTTGAAAAGGTTTAGT+AGG | + | chr7_1:78678647-78678666 | Msa1041150:CDS | 35.0% | |
| ! | AAGCCTACTAAACCTTTTCA+AGG | - | chr7_1:78678653-78678672 | None:intergenic | 35.0% |
| CTACAAACAGTTGCATATGT+TGG | - | chr7_1:78678684-78678703 | None:intergenic | 35.0% | |
| GTGATTAAAGGAACGATACC+AGG | - | chr7_1:78675802-78675821 | None:intergenic | 40.0% | |
| GGAGAATGTAAACAGAGTTG+TGG | + | chr7_1:78675981-78676000 | Msa1041150:CDS | 40.0% | |
| GTAAACAGAGTTGTGGAAGA+AGG | + | chr7_1:78675988-78676007 | Msa1041150:CDS | 40.0% | |
| GAAGAAGGAGATGGACAAAA+TGG | + | chr7_1:78676003-78676022 | Msa1041150:CDS | 40.0% | |
| AGATGGACAAAATGGGAACT+GGG | + | chr7_1:78676011-78676030 | Msa1041150:CDS | 40.0% | |
| ! | AAATGGGAACTGGGTTTTCA+AGG | + | chr7_1:78676020-78676039 | Msa1041150:CDS | 40.0% |
| !!! | CGTTTTCTAGAATGCTTCGT+AGG | + | chr7_1:78676187-78676206 | Msa1041150:CDS | 40.0% |
| TATGCACACATGTCTCACTT+GGG | + | chr7_1:78676234-78676253 | Msa1041150:CDS | 40.0% | |
| ! | ACCTGATTTGTAGGCTTTGT+TGG | + | chr7_1:78676540-78676559 | Msa1041150:intron | 40.0% |
| TCCAACAAAGCCTACAAATC+AGG | - | chr7_1:78676544-78676563 | None:intergenic | 40.0% | |
| ! | GATCGGAATATAGTTCTGCT+AGG | + | chr7_1:78676622-78676641 | Msa1041150:intron | 40.0% |
| GTTCTGCTAGGAAGATATGT+AGG | + | chr7_1:78676634-78676653 | Msa1041150:intron | 40.0% | |
| AGGAAGATATGTAGGTCAGT+AGG | + | chr7_1:78676642-78676661 | Msa1041150:intron | 40.0% | |
| AAGATATGTAGGTCAGTAGG+TGG | + | chr7_1:78676645-78676664 | Msa1041150:intron | 40.0% | |
| AGATATGTAGGTCAGTAGGT+GGG | + | chr7_1:78676646-78676665 | Msa1041150:intron | 40.0% | |
| TTGGAACTGTGAATTTAGCC+AGG | + | chr7_1:78676767-78676786 | Msa1041150:intron | 40.0% | |
| TGGAACTGTGAATTTAGCCA+GGG | + | chr7_1:78676768-78676787 | Msa1041150:intron | 40.0% | |
| AACAACCGCTGTCATTGAAT+TGG | - | chr7_1:78677050-78677069 | None:intergenic | 40.0% | |
| GTCACATATGAACCATTCAC+AGG | - | chr7_1:78677134-78677153 | None:intergenic | 40.0% | |
| GTTCAGAGTCATTTGAATCC+TGG | + | chr7_1:78677362-78677381 | Msa1041150:CDS | 40.0% | |
| GATGCGATTCCTCTTGTTAA+AGG | + | chr7_1:78677457-78677476 | Msa1041150:intron | 40.0% | |
| TTAGATGTCCTTGTCCATAG+AGG | + | chr7_1:78677586-78677605 | Msa1041150:CDS | 40.0% | |
| CATAGATACCTCTATGGACA+AGG | - | chr7_1:78677597-78677616 | None:intergenic | 40.0% | |
| !! | TGTCCATAGAGGTATCTATG+AGG | + | chr7_1:78677597-78677616 | Msa1041150:CDS | 40.0% |
| GTATCTATGAGGCTGCTAAA+GGG | + | chr7_1:78677608-78677627 | Msa1041150:CDS | 40.0% | |
| ATATCAACAGATGTTACCCG+AGG | + | chr7_1:78677633-78677652 | Msa1041150:CDS | 40.0% | |
| !! | TTTTAGGTGAGCATGAACCT+CGG | - | chr7_1:78677653-78677672 | None:intergenic | 40.0% |
| CATGCTCACCTAAAATCTCA+AGG | + | chr7_1:78677658-78677677 | Msa1041150:CDS | 40.0% | |
| CCTAAAATCTCAAGGTTCTC+GGG | + | chr7_1:78677666-78677685 | Msa1041150:CDS | 40.0% | |
| GTAATTCTGCGACATGGTTA+GGG | - | chr7_1:78677930-78677949 | None:intergenic | 40.0% | |
| AGTAATTCTGCGACATGGTT+AGG | - | chr7_1:78677931-78677950 | None:intergenic | 40.0% | |
| CCTTTAGTAATTCTGCGACA+TGG | - | chr7_1:78677936-78677955 | None:intergenic | 40.0% | |
| CCATGTCGCAGAATTACTAA+AGG | + | chr7_1:78677933-78677952 | Msa1041150:CDS | 40.0% | |
| AGAATCAGTAATTCGCCCAT+CGG | - | chr7_1:78678199-78678218 | None:intergenic | 40.0% | |
| TCGGTCACTTAATATCTCGA+GGG | - | chr7_1:78678371-78678390 | None:intergenic | 40.0% | |
| ATCGGTCACTTAATATCTCG+AGG | - | chr7_1:78678372-78678391 | None:intergenic | 40.0% | |
| CATGTCATGATCTCTGTGTA+TGG | - | chr7_1:78678416-78678435 | None:intergenic | 40.0% | |
| AAGGAGAGAACTAAGACGAA+AGG | + | chr7_1:78678501-78678520 | Msa1041150:CDS | 40.0% | |
| !! | GAGGCTGGTCTTGAATAATA+CGG | - | chr7_1:78678597-78678616 | None:intergenic | 40.0% |
| TGTTTAATCCCTGAAAAGGG+AGG | - | chr7_1:78678616-78678635 | None:intergenic | 40.0% | |
| CAGGTAGAAAGTCCTTGAAA+AGG | + | chr7_1:78678638-78678657 | Msa1041150:CDS | 40.0% | |
| ATGCACGTGAACGTGATCAT+TGG | - | chr7_1:78675854-78675873 | None:intergenic | 45.0% | |
| AGAGTTGTGGAAGAAGGAGA+TGG | + | chr7_1:78675994-78676013 | Msa1041150:CDS | 45.0% | |
| GAGATGGACAAAATGGGAAC+TGG | + | chr7_1:78676010-78676029 | Msa1041150:CDS | 45.0% | |
| GTATGCACACATGTCTCACT+TGG | + | chr7_1:78676233-78676252 | Msa1041150:CDS | 45.0% | |
| ATGCACACATGTCTCACTTG+GGG | + | chr7_1:78676235-78676254 | Msa1041150:CDS | 45.0% | |
| CATGTCTCACTTGGGGAATT+TGG | + | chr7_1:78676242-78676261 | Msa1041150:CDS | 45.0% | |
| GATATGTAGGTCAGTAGGTG+GGG | + | chr7_1:78676647-78676666 | Msa1041150:intron | 45.0% | |
| GAAACCAATGGGAAAGATGC+CGG | + | chr7_1:78676872-78676891 | Msa1041150:CDS | 45.0% | |
| AGATGCCGGAGAAAGAAAAG+AGG | + | chr7_1:78676886-78676905 | Msa1041150:CDS | 45.0% | |
| TGATGCTTGTGAGATTGCAG+TGG | + | chr7_1:78676940-78676959 | Msa1041150:CDS | 45.0% | |
| TGTGAGATTGCAGTGGTTGA+AGG | + | chr7_1:78676947-78676966 | Msa1041150:CDS | 45.0% | |
| AACTGACGTTGGGTCTTTGA+TGG | + | chr7_1:78677018-78677037 | Msa1041150:CDS | 45.0% | |
| CAAGTTCTTCACCCTGTGAA+TGG | + | chr7_1:78677119-78677138 | Msa1041150:CDS | 45.0% | |
| AGAGTCATTTGAATCCTGGC+AGG | + | chr7_1:78677366-78677385 | Msa1041150:CDS | 45.0% | |
| AAAAAGTAGGTTTGCCTGCC+AGG | - | chr7_1:78677383-78677402 | None:intergenic | 45.0% | |
| ACAAGGACATCTAACCCCTA+AGG | - | chr7_1:78677580-78677599 | None:intergenic | 45.0% | |
| CAGCCTCATAGATACCTCTA+TGG | - | chr7_1:78677603-78677622 | None:intergenic | 45.0% | |
| GGTATCTATGAGGCTGCTAA+AGG | + | chr7_1:78677607-78677626 | Msa1041150:CDS | 45.0% | |
| TTTAGGTGAGCATGAACCTC+GGG | - | chr7_1:78677652-78677671 | None:intergenic | 45.0% | |
| ! | CCCGAGAACCTTGAGATTTT+AGG | - | chr7_1:78677669-78677688 | None:intergenic | 45.0% |
| CAAGAGAATGGCCAGTGAAA+CGG | - | chr7_1:78677699-78677718 | None:intergenic | 45.0% | |
| GTTTCACTGGCCATTCTCTT+GGG | + | chr7_1:78677698-78677717 | Msa1041150:CDS | 45.0% | |
| TTTCACTGGCCATTCTCTTG+GGG | + | chr7_1:78677699-78677718 | Msa1041150:CDS | 45.0% | |
| TTGCTTCCTGTGGTAACCTT+TGG | + | chr7_1:78677784-78677803 | Msa1041150:CDS | 45.0% | |
| TCGAAAAGCTAGGTTTACCG+CGG | + | chr7_1:78677842-78677861 | Msa1041150:CDS | 45.0% | |
| TGCACAGAGACATAGTACCA+CGG | + | chr7_1:78677887-78677906 | Msa1041150:CDS | 45.0% | |
| TACTTGCATGAAAATGCCCG+TGG | - | chr7_1:78677907-78677926 | None:intergenic | 45.0% | |
| ! | AAGCTGCTATATGCACCGAT+GGG | + | chr7_1:78678181-78678200 | Msa1041150:CDS | 45.0% |
| TAGCCATCATCTTCTTCCAC+CGG | + | chr7_1:78678243-78678262 | Msa1041150:CDS | 45.0% | |
| !! | CCAATTTAGCAGCTTTGAGC+TGG | - | chr7_1:78678327-78678346 | None:intergenic | 45.0% |
| CCAGCTCAAAGCTGCTAAAT+TGG | + | chr7_1:78678324-78678343 | Msa1041150:CDS | 45.0% | |
| CTTAATATCTCGAGGGGATG+TGG | - | chr7_1:78678364-78678383 | None:intergenic | 45.0% | |
| CGGTCACTTAATATCTCGAG+GGG | - | chr7_1:78678370-78678389 | None:intergenic | 45.0% | |
| GAGAACTAAGACGAAAGGTG+CGG | + | chr7_1:78678506-78678525 | Msa1041150:CDS | 45.0% | |
| GTAAGTGATGCGGACATTGT+TGG | + | chr7_1:78678550-78678569 | Msa1041150:CDS | 45.0% | |
| GTGTTCTTGCTTCCTACTCT+CGG | + | chr7_1:78678703-78678722 | Msa1041150:CDS | 45.0% | |
| GCATCAATCTCACGTGAGCA+CGG | + | chr7_1:78675870-78675889 | Msa1041150:CDS | 50.0% | |
| CACTGTACACGCCTTTAGTG+TGG | - | chr7_1:78676425-78676444 | None:intergenic | 50.0% | |
| AGCCAGGGAACCTCTTGAAA+AGG | + | chr7_1:78676783-78676802 | Msa1041150:intron | 50.0% | |
| !! | CACCTTTTCAAGAGGTTCCC+TGG | - | chr7_1:78676788-78676807 | None:intergenic | 50.0% |
| GGGAACCTCTTGAAAAGGTG+TGG | + | chr7_1:78676788-78676807 | Msa1041150:CDS | 50.0% | |
| !! | GCAGACCACACCTTTTCAAG+AGG | - | chr7_1:78676796-78676815 | None:intergenic | 50.0% |
| TTCTCCGGCATCTTTCCCAT+TGG | - | chr7_1:78676879-78676898 | None:intergenic | 50.0% | |
| CGTTTCACTGGCCATTCTCT+TGG | + | chr7_1:78677697-78677716 | Msa1041150:CDS | 50.0% | |
| TTCACTGGCCATTCTCTTGG+GGG | + | chr7_1:78677700-78677719 | Msa1041150:CDS | 50.0% | |
| ! | TCACCTCCACACATGATGGA+CGG | - | chr7_1:78677814-78677833 | None:intergenic | 50.0% |
| ACGATCACCTCCACACATGA+TGG | - | chr7_1:78677818-78677837 | None:intergenic | 50.0% | |
| GATCGTCTGCTCGAAAAGCT+AGG | + | chr7_1:78677832-78677851 | Msa1041150:CDS | 50.0% | |
| ATTCCTTGAACGTGACTCCG+CGG | - | chr7_1:78677862-78677881 | None:intergenic | 50.0% | |
| GCACAGAGACATAGTACCAC+GGG | + | chr7_1:78677888-78677907 | Msa1041150:CDS | 50.0% | |
| ACAAGGATGACTGCGGAAAC+TGG | - | chr7_1:78677968-78677987 | None:intergenic | 50.0% | |
| GAAGCTGCTATATGCACCGA+TGG | + | chr7_1:78678180-78678199 | Msa1041150:intron | 50.0% | |
| ! | GGTGGAAGAAGATGATGGCT+AGG | - | chr7_1:78678244-78678263 | None:intergenic | 50.0% |
| AGCCATCATCTTCTTCCACC+GGG | + | chr7_1:78678244-78678263 | Msa1041150:CDS | 50.0% | |
| TACCCGGTGGAAGAAGATGA+TGG | - | chr7_1:78678249-78678268 | None:intergenic | 50.0% | |
| AGATATAGACCACTACCCGG+TGG | - | chr7_1:78678262-78678281 | None:intergenic | 50.0% | |
| TTAAGTGACCGATCCGCCTA+TGG | + | chr7_1:78678379-78678398 | Msa1041150:CDS | 50.0% | |
| GCTGAGTTCTTGGCGAATCA+CGG | - | chr7_1:78678464-78678483 | None:intergenic | 50.0% | |
| TGCGGATTTGGCTGAGTTCT+TGG | - | chr7_1:78678474-78678493 | None:intergenic | 50.0% | |
| AGAACTCAGCCAAATCCGCA+CGG | + | chr7_1:78678474-78678493 | Msa1041150:CDS | 50.0% | |
| ! | AACTAAGACGAAAGGTGCGG+TGG | + | chr7_1:78678509-78678528 | Msa1041150:CDS | 50.0% |
| CTTACACTTCGTGCCACAAG+AGG | - | chr7_1:78678535-78678554 | None:intergenic | 50.0% | |
| GGCACGAAGTGTAAGTGATG+CGG | + | chr7_1:78678540-78678559 | Msa1041150:CDS | 50.0% | |
| AGTGATGCGGACATTGTTGG+TGG | + | chr7_1:78678553-78678572 | Msa1041150:CDS | 50.0% | |
| GTGATGCGGACATTGTTGGT+GGG | + | chr7_1:78678554-78678573 | Msa1041150:CDS | 50.0% | |
| ! | CATTGTTGGTGGGAGATCCA+TGG | + | chr7_1:78678564-78678583 | Msa1041150:CDS | 50.0% |
| ! | AAGACCAGCCTCCCTTTTCA+GGG | + | chr7_1:78678605-78678624 | Msa1041150:CDS | 50.0% |
| TAATCCCTGAAAAGGGAGGC+TGG | - | chr7_1:78678612-78678631 | None:intergenic | 50.0% | |
| AATCTCACGTGAGCACGGTG+AGG | + | chr7_1:78675875-78675894 | Msa1041150:CDS | 55.0% | |
| CTCCGCCAGAAACAATTGCC+TGG | + | chr7_1:78675939-78675958 | Msa1041150:CDS | 55.0% | |
| !! | GGCCAGGCAATTGTTTCTGG+CGG | - | chr7_1:78675944-78675963 | None:intergenic | 55.0% |
| GACGGCCAGGCAATTGTTTC+TGG | - | chr7_1:78675947-78675966 | None:intergenic | 55.0% | |
| CGGGCAACTTTCCGTTTCAC+TGG | + | chr7_1:78677685-78677704 | Msa1041150:CDS | 55.0% | |
| CCAAGCTTCCCCCAAGAGAA+TGG | - | chr7_1:78677711-78677730 | None:intergenic | 55.0% | |
| CCATTCTCTTGGGGGAAGCT+TGG | + | chr7_1:78677708-78677727 | Msa1041150:CDS | 55.0% | |
| !! | ACCTCCACACATGATGGACG+GGG | - | chr7_1:78677812-78677831 | None:intergenic | 55.0% |
| !! | CACCTCCACACATGATGGAC+GGG | - | chr7_1:78677813-78677832 | None:intergenic | 55.0% |
| TTACCGCGGAGTCACGTTCA+AGG | + | chr7_1:78677856-78677875 | Msa1041150:CDS | 55.0% | |
| CATCTTCTTCCACCGGGTAG+TGG | + | chr7_1:78678250-78678269 | Msa1041150:CDS | 55.0% | |
| TATGGCTCCTCCAGGTCCAT+AGG | - | chr7_1:78678398-78678417 | None:intergenic | 55.0% | |
| TCTCTGTGTATGGCTCCTCC+AGG | - | chr7_1:78678406-78678425 | None:intergenic | 55.0% | |
| ! | CAAGACCAGCCTCCCTTTTC+AGG | + | chr7_1:78678604-78678623 | Msa1041150:CDS | 55.0% |
| GGGGAGCCAAAGGTTACCAC+AGG | - | chr7_1:78677793-78677812 | None:intergenic | 60.0% | |
| !! | CATGATGGACGGGGAGCCAA+AGG | - | chr7_1:78677803-78677822 | None:intergenic | 60.0% |
| TCCCCGTCCATCATGTGTGG+AGG | + | chr7_1:78677808-78677827 | Msa1041150:CDS | 60.0% | |
| CTCCAGGTCCATAGGCGGAT+CGG | - | chr7_1:78678390-78678409 | None:intergenic | 60.0% | |
| TCCTTGCTGCCGTGCGGATT+TGG | - | chr7_1:78678486-78678505 | None:intergenic | 60.0% | |
| GTTCTCTCCTTGCTGCCGTG+CGG | - | chr7_1:78678492-78678511 | None:intergenic | 60.0% | |
| ! | AAAGGTGCGGTGGCCTCTTG+TGG | + | chr7_1:78678519-78678538 | Msa1041150:CDS | 60.0% |
| CAATTGCCTGGCCGTCGACG+AGG | + | chr7_1:78675951-78675970 | Msa1041150:CDS | 65.0% | |
| CCTGGCCGTCGACGAGGTTA+CGG | + | chr7_1:78675957-78675976 | Msa1041150:CDS | 65.0% | |
| CTCCGCCGTAACCTCGTCGA+CGG | - | chr7_1:78675965-78675984 | None:intergenic | 65.0% | |
| GGCTCCCCGTCCATCATGTG+TGG | + | chr7_1:78677805-78677824 | Msa1041150:CDS | 65.0% | |
| GACCGATCCGCCTATGGACC+TGG | + | chr7_1:78678385-78678404 | Msa1041150:CDS | 65.0% | |
| CGATCCGCCTATGGACCTGG+AGG | + | chr7_1:78678388-78678407 | Msa1041150:CDS | 65.0% | |
| GGCTCCTCCAGGTCCATAGG+CGG | - | chr7_1:78678395-78678414 | None:intergenic | 65.0% | |
| GCCAAATCCGCACGGCAGCA+AGG | + | chr7_1:78678482-78678501 | Msa1041150:CDS | 65.0% | |
| CCGTAACCTCGTCGACGGCC+AGG | - | chr7_1:78675960-78675979 | None:intergenic | 70.0% | |
| GGCCGTCGACGAGGTTACGG+CGG | + | chr7_1:78675960-78675979 | Msa1041150:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 78675766 | 78678735 | 78675766 | ID=Msa1041150;Name=Msa1041150 |
| chr7_1 | mRNA | 78675766 | 78678735 | 78675766 | ID=Msa1041150-mRNA-1;Parent=Msa1041150;Name=Msa1041150-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0.75|0.8|5|0|664 |
| chr7_1 | exon | 78675766 | 78676323 | 78675766 | ID=Msa1041150-mRNA-1:exon:21036;Parent=Msa1041150-mRNA-1 |
| chr7_1 | exon | 78676785 | 78677189 | 78676785 | ID=Msa1041150-mRNA-1:exon:21037;Parent=Msa1041150-mRNA-1 |
| chr7_1 | exon | 78677361 | 78677420 | 78677361 | ID=Msa1041150-mRNA-1:exon:21038;Parent=Msa1041150-mRNA-1 |
| chr7_1 | exon | 78677583 | 78677999 | 78677583 | ID=Msa1041150-mRNA-1:exon:21039;Parent=Msa1041150-mRNA-1 |
| chr7_1 | exon | 78678181 | 78678735 | 78678181 | ID=Msa1041150-mRNA-1:exon:21040;Parent=Msa1041150-mRNA-1 |
| chr7_1 | CDS | 78675766 | 78676323 | 78675766 | ID=Msa1041150-mRNA-1:cds;Parent=Msa1041150-mRNA-1 |
| chr7_1 | CDS | 78676785 | 78677189 | 78676785 | ID=Msa1041150-mRNA-1:cds;Parent=Msa1041150-mRNA-1 |
| chr7_1 | CDS | 78677361 | 78677420 | 78677361 | ID=Msa1041150-mRNA-1:cds;Parent=Msa1041150-mRNA-1 |
| chr7_1 | CDS | 78677583 | 78677999 | 78677583 | ID=Msa1041150-mRNA-1:cds;Parent=Msa1041150-mRNA-1 |
| chr7_1 | CDS | 78678181 | 78678735 | 78678181 | ID=Msa1041150-mRNA-1:cds;Parent=Msa1041150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
