Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082310 | XP_039684274.1 | 90.881 | 658 | 51 | 4 | 1 | 656 | 1 | 651 | 0.0 | 1169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082310 | sp|F4HXL0|PLIP2_ARATH | 53.278 | 717 | 250 | 18 | 1 | 651 | 1 | 698 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082310 | G7KSR9 | 90.045 | 663 | 52 | 5 | 1 | 656 | 1 | 656 | 0.0 | 1159 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1041150 | Msa1082310 | 0.851183 | 1.047642e-60 | -8.615850e-47 |
| Msa1082310 | Msa1127180 | 0.819680 | 1.022613e-52 | -8.615850e-47 |
| Msa1082310 | Msa1132950 | 0.801268 | 9.755091e-49 | -8.615850e-47 |
| Msa1082310 | Msa1362010 | 0.822305 | 2.543243e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082310 | MtrunA17_Chr7g0269851 | 86.272 | 692 | 52 | 5 | 1 | 656 | 1 | 685 | 0.0 | 1145 |
| Msa1082310 | MtrunA17_Chr1g0194901 | 61.158 | 708 | 194 | 16 | 1 | 651 | 1 | 684 | 0.0 | 788 |
| Msa1082310 | MtrunA17_Chr7g0275571 | 41.901 | 568 | 266 | 13 | 78 | 593 | 113 | 668 | 9.81e-131 | 400 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082310 | AT1G02660.1 | 53.278 | 717 | 250 | 18 | 1 | 651 | 1 | 698 | 0.0 | 627 |
| Msa1082310 | AT3G62590.1 | 52.326 | 602 | 216 | 10 | 73 | 651 | 72 | 625 | 0.0 | 551 |
| Msa1082310 | AT3G61680.2 | 47.490 | 518 | 250 | 7 | 88 | 592 | 120 | 628 | 1.54e-148 | 446 |
| Msa1082310 | AT3G61680.1 | 47.490 | 518 | 250 | 7 | 88 | 592 | 120 | 628 | 1.54e-148 | 446 |
| Msa1082310 | AT3G61680.3 | 47.490 | 518 | 250 | 7 | 88 | 592 | 120 | 628 | 1.54e-148 | 446 |
Find 153 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGGCCAGGTAATTGTTTC+TGG | 0.171266 | 7_2:-82373837 | None:intergenic |
| CATGTCTCACTTGGGGAATT+TGG | 0.213240 | 7_2:+82374132 | Msa1082310:CDS |
| TCCTTGCTGCCGTGCGGATT+TGG | 0.226066 | 7_2:-82376378 | None:intergenic |
| TGCGGATTTGGCTGAGTTCT+TGG | 0.237935 | 7_2:-82376366 | None:intergenic |
| GAAGAAGGAGATGGAGAAAA+TGG | 0.247361 | 7_2:+82373896 | Msa1082310:CDS |
| CGTTTCACTGGCCATTCTCT+TGG | 0.258914 | 7_2:+82375592 | Msa1082310:CDS |
| CCAGCTCAAAGCTGCTAAAT+TGG | 0.265066 | 7_2:+82376219 | Msa1082310:CDS |
| GATGAAATAAACCTTGATAT+TGG | 0.297573 | 7_2:-82374167 | None:intergenic |
| AGTAATTCTGCGACATGGTT+AGG | 0.309991 | 7_2:-82375823 | None:intergenic |
| GTTTCACTGGCCATTCTCTT+GGG | 0.310775 | 7_2:+82375593 | Msa1082310:CDS |
| TTGCTTCCTGTGGTAACCTT+TGG | 0.325594 | 7_2:+82375679 | Msa1082310:CDS |
| ATGAAATAAACCTTGATATT+GGG | 0.350525 | 7_2:-82374166 | None:intergenic |
| ACAGGAAGCAAAGAAGAAAT+AGG | 0.368214 | 7_2:-82375667 | None:intergenic |
| TAAATCTTATGCTGCTGATA+AGG | 0.368606 | 7_2:+82375635 | Msa1082310:CDS |
| AGTCCTTGAAAAGGTTTAGT+AGG | 0.369572 | 7_2:+82376542 | Msa1082310:CDS |
| AACTGACGTTGGGTCTTTGA+TGG | 0.377743 | 7_2:+82374911 | Msa1082310:CDS |
| TTATTACAAAGTGGGATTCC+TGG | 0.377761 | 7_2:+82373659 | Msa1082310:CDS |
| ACAAGGATGACTGCGGAAAC+TGG | 0.384297 | 7_2:-82375860 | None:intergenic |
| ATGAAAATGAAGAAGAGATT+AGG | 0.395176 | 7_2:+82374041 | Msa1082310:CDS |
| GCAGTAATAGAAGTGATTAA+AGG | 0.396032 | 7_2:-82373689 | None:intergenic |
| ACCTAAAATCTCAAGGTTCT+CGG | 0.414863 | 7_2:+82375560 | Msa1082310:CDS |
| TGTCTGTTTAATCCCTGAAA+AGG | 0.415869 | 7_2:-82376512 | None:intergenic |
| AACAACTGCTGTCATTGAAT+TGG | 0.422992 | 7_2:-82374940 | None:intergenic |
| CGGGCAACTTTCCGTTTCAC+TGG | 0.425212 | 7_2:+82375580 | Msa1082310:CDS |
| GAGATGGAGAAAATGGGAAC+TGG | 0.427346 | 7_2:+82373903 | Msa1082310:CDS |
| CTTAATATCTCGAGGGGATG+TGG | 0.443615 | 7_2:-82376256 | None:intergenic |
| AAATCTTATGCTGCTGATAA+GGG | 0.445335 | 7_2:+82375636 | Msa1082310:CDS |
| TTCTCCGGCATCTTTCCCAT+TGG | 0.445792 | 7_2:-82374769 | None:intergenic |
| GTGGTTGAAGGTTCACTTGA+AGG | 0.447799 | 7_2:+82374852 | Msa1082310:CDS |
| ACAATTACCTCAAATTGAAC+TGG | 0.447991 | 7_2:-82375301 | None:intergenic |
| CAGCCTCATAGATACCTCTA+TGG | 0.448318 | 7_2:-82375495 | None:intergenic |
| CAAGTTCTTCACCCTGTGAA+TGG | 0.449149 | 7_2:+82375012 | Msa1082310:CDS |
| TGTGAGATTGCAGTGGTTGA+AGG | 0.449691 | 7_2:+82374840 | Msa1082310:CDS |
| CCTGGCCGTCGACGAGGTTA+CGG | 0.459662 | 7_2:+82373850 | Msa1082310:CDS |
| GTAATTCTGCGACATGGTTA+GGG | 0.460593 | 7_2:-82375822 | None:intergenic |
| CCTAAAATCTCAAGGTTCTC+GGG | 0.463443 | 7_2:+82375561 | Msa1082310:CDS |
| ATCAATAGAGAAGAAGGAAC+TGG | 0.468428 | 7_2:+82374722 | Msa1082310:CDS |
| ATACTCTATTCCCAATATCA+AGG | 0.470253 | 7_2:+82374156 | Msa1082310:CDS |
| TTTCACTGGCCATTCTCTTG+GGG | 0.474247 | 7_2:+82375594 | Msa1082310:CDS |
| CCAATTTAGCAGCTTTGAGC+TGG | 0.478041 | 7_2:-82376219 | None:intergenic |
| CTACAAACAGTTGCATATGT+TGG | 0.479518 | 7_2:-82376576 | None:intergenic |
| GACCGATCCGCCTATGGACC+TGG | 0.482864 | 7_2:+82376280 | Msa1082310:CDS |
| TACAAACAGTTGCATATGTT+GGG | 0.484145 | 7_2:-82376575 | None:intergenic |
| TATGAATCTGTAAAACTTGG+AGG | 0.485150 | 7_2:-82373804 | None:intergenic |
| AGCCAGGGAACCTCTTGAAA+AGG | 0.486455 | 7_2:+82374676 | Msa1082310:intron |
| CCGTAACCTCGTCGACGGCC+AGG | 0.488434 | 7_2:-82373850 | None:intergenic |
| TCTTAATTCTGTATGGAAAG+AGG | 0.488435 | 7_2:+82373943 | Msa1082310:CDS |
| CATGTCATGATCTCTGTGTA+TGG | 0.489901 | 7_2:-82376308 | None:intergenic |
| GTATCTATGAGGCTGCTAAA+GGG | 0.492305 | 7_2:+82375503 | Msa1082310:CDS |
| CACCTCCACACATGATGGAC+GGG | 0.493139 | 7_2:-82375705 | None:intergenic |
| TTAAGTGACCGATCCGCCTA+TGG | 0.498782 | 7_2:+82376274 | Msa1082310:CDS |
| GTAAACAGAGTTGTGGAAGA+AGG | 0.499077 | 7_2:+82373881 | Msa1082310:CDS |
| ACCTATGAATCTGTAAAACT+TGG | 0.499685 | 7_2:-82373807 | None:intergenic |
| GTTCAGAGTCATTTGAATCC+TGG | 0.500446 | 7_2:+82375257 | Msa1082310:CDS |
| CAAGAGAATGGCCAGTGAAA+CGG | 0.500612 | 7_2:-82375591 | None:intergenic |
| AGAGTTGTGGAAGAAGGAGA+TGG | 0.500925 | 7_2:+82373887 | Msa1082310:CDS |
| TATTTCTTCTTTGCTTCCTG+TGG | 0.504548 | 7_2:+82375669 | Msa1082310:CDS |
| GGTATCTATGAGGCTGCTAA+AGG | 0.505259 | 7_2:+82375502 | Msa1082310:CDS |
| GTGTTCTTGCTTCCTACTCT+CGG | 0.506196 | 7_2:+82376598 | Msa1082310:CDS |
| CAGGTAGAAAGTCCTTGAAA+AGG | 0.511559 | 7_2:+82376533 | Msa1082310:CDS |
| GCTGAGTTCTTGGCGAATCA+CGG | 0.511618 | 7_2:-82376356 | None:intergenic |
| GAAAGAAAAGAGGAAAAGAA+TGG | 0.514106 | 7_2:+82374789 | Msa1082310:CDS |
| AAAGGTGCGGTGGCCTCTTG+TGG | 0.515177 | 7_2:+82376414 | Msa1082310:CDS |
| AAGAAGGAGATGGAGAAAAT+GGG | 0.516970 | 7_2:+82373897 | Msa1082310:CDS |
| TATGGCTCCTCCAGGTCCAT+AGG | 0.518076 | 7_2:-82376290 | None:intergenic |
| CTTTGTGTTTATTACAAAGT+GGG | 0.518264 | 7_2:+82373651 | Msa1082310:CDS |
| GTCTGTTTAATCCCTGAAAA+GGG | 0.519128 | 7_2:-82376511 | None:intergenic |
| GTCACATATGAACCATTCAC+AGG | 0.527693 | 7_2:-82375024 | None:intergenic |
| AACTTCATCAATAGAGAAGA+AGG | 0.527755 | 7_2:+82374716 | Msa1082310:CDS |
| GTAAGTGATGCGGACATTGT+TGG | 0.530938 | 7_2:+82376445 | Msa1082310:CDS |
| TAGCCATCATCTTCTTCCAC+CGG | 0.535478 | 7_2:+82376138 | Msa1082310:CDS |
| TTTAGGTGAGCATGAACCTC+GGG | 0.536388 | 7_2:-82375544 | None:intergenic |
| CTCCAGGTCCATAGGCGGAT+CGG | 0.536666 | 7_2:-82376282 | None:intergenic |
| TTAAGAAAGAAGAAACCAAT+GGG | 0.538108 | 7_2:+82374754 | Msa1082310:CDS |
| TAATCCCTGAAAAGGGAGGC+TGG | 0.541253 | 7_2:-82376504 | None:intergenic |
| CCATGTCGCAGAATTACTAA+AGG | 0.544242 | 7_2:+82375828 | Msa1082310:CDS |
| ACGATCACCTCCACACATGA+TGG | 0.544848 | 7_2:-82375710 | None:intergenic |
| ATGCACGTGAACGTGATCAT+TGG | 0.546832 | 7_2:-82373744 | None:intergenic |
| GAAGCTGCTATATGCACCGA+TGG | 0.548227 | 7_2:+82376075 | Msa1082310:intron |
| AGAGTCATTTGAATCCTGGC+AGG | 0.551210 | 7_2:+82375261 | Msa1082310:CDS |
| GTATGCACACATGTCTCACT+TGG | 0.551229 | 7_2:+82374123 | Msa1082310:CDS |
| CTCCGCCAGAAACAATTACC+TGG | 0.552461 | 7_2:+82373832 | Msa1082310:CDS |
| GAAACCAATGGGAAAGATGC+CGG | 0.552736 | 7_2:+82374765 | Msa1082310:CDS |
| TTACCGCAGAGTCACGTTCA+AGG | 0.553282 | 7_2:+82375751 | Msa1082310:CDS |
| CCTTTAGTAATTCTGCGACA+TGG | 0.559948 | 7_2:-82375828 | None:intergenic |
| GTGATTAAAGGAACGATACC+AGG | 0.560094 | 7_2:-82373677 | None:intergenic |
| GCCAAATCCGCACGGCAGCA+AGG | 0.565559 | 7_2:+82376377 | Msa1082310:CDS |
| ATTAAGAAAGAAGAAACCAA+TGG | 0.569071 | 7_2:+82374753 | Msa1082310:CDS |
| GATCGTCTGCTCGAAAAGCT+AGG | 0.570026 | 7_2:+82375727 | Msa1082310:CDS |
| AGATGGAGAAAATGGGAACT+GGG | 0.570726 | 7_2:+82373904 | Msa1082310:CDS |
| TCTCTGTGTATGGCTCCTCC+AGG | 0.571504 | 7_2:-82376298 | None:intergenic |
| CAATTACCTGGCCGTCGACG+AGG | 0.571680 | 7_2:+82373844 | Msa1082310:CDS |
| TATGCACACATGTCTCACTT+GGG | 0.573102 | 7_2:+82374124 | Msa1082310:CDS |
| CATGATGGACGGGGAGCCAA+AGG | 0.574571 | 7_2:-82375695 | None:intergenic |
| CATTGTTGGTGGGAGATCCA+TGG | 0.578805 | 7_2:+82376459 | Msa1082310:CDS |
| TTCACTGGCCATTCTCTTGG+GGG | 0.579207 | 7_2:+82375595 | Msa1082310:CDS |
| ATCGGTCACTTAATATCTCG+AGG | 0.582626 | 7_2:-82376264 | None:intergenic |
| ACTTTGTGTTTATTACAAAG+TGG | 0.587222 | 7_2:+82373650 | Msa1082310:CDS |
| CATGCTCACCTAAAATCTCA+AGG | 0.588915 | 7_2:+82375553 | Msa1082310:CDS |
| GAGGCTGGTCTTGAATAATA+CGG | 0.591656 | 7_2:-82376489 | None:intergenic |
| AGTTATATGTTTCCGAGAGT+AGG | 0.593280 | 7_2:-82376610 | None:intergenic |
| CATTTGATTCTGAAAGAAGA+GGG | 0.594352 | 7_2:-82376186 | None:intergenic |
| TCACCTCCACACATGATGGA+CGG | 0.595113 | 7_2:-82375706 | None:intergenic |
| TGTTTGTAGAGTTGATGAAG+AGG | 0.596553 | 7_2:+82374003 | Msa1082310:CDS |
| TCATTTGATTCTGAAAGAAG+AGG | 0.596751 | 7_2:-82376187 | None:intergenic |
| GGCTCCCCGTCCATCATGTG+TGG | 0.599550 | 7_2:+82375700 | Msa1082310:CDS |
| GCACAGAGACATAGTACCAC+GGG | 0.600168 | 7_2:+82375783 | Msa1082310:CDS |
| CTCCGCCGTAACCTCGTCGA+CGG | 0.603252 | 7_2:-82373855 | None:intergenic |
| AGATGCCGGAGAAAGAAAAG+AGG | 0.605156 | 7_2:+82374779 | Msa1082310:CDS |
| TACCCGGTGGAAGAAGATGA+TGG | 0.607656 | 7_2:-82376141 | None:intergenic |
| AAGCTGCTATATGCACCGAT+GGG | 0.608378 | 7_2:+82376076 | Msa1082310:CDS |
| AGAATCAGTAATTCGCCCAT+CGG | 0.612468 | 7_2:-82376091 | None:intergenic |
| GGGAACCTCTTGAAAAGGTG+TGG | 0.615583 | 7_2:+82374681 | Msa1082310:CDS |
| AAGGAGAGAACTAAGACGAA+AGG | 0.616416 | 7_2:+82376396 | Msa1082310:CDS |
| CATAGATACCTCTATGGACA+AGG | 0.616860 | 7_2:-82375489 | None:intergenic |
| AGTGATGCGGACATTGTTGG+TGG | 0.617441 | 7_2:+82376448 | Msa1082310:CDS |
| GGCTCCTCCAGGTCCATAGG+CGG | 0.617601 | 7_2:-82376287 | None:intergenic |
| GGTGGAAGAAGATGATGGCT+AGG | 0.619407 | 7_2:-82376136 | None:intergenic |
| AACTAAGACGAAAGGTGCGG+TGG | 0.620457 | 7_2:+82376404 | Msa1082310:CDS |
| AGCCATCATCTTCTTCCACC+GGG | 0.620848 | 7_2:+82376139 | Msa1082310:CDS |
| TGTCCATAGAGGTATCTATG+AGG | 0.623935 | 7_2:+82375492 | Msa1082310:CDS |
| GGCCAGGTAATTGTTTCTGG+CGG | 0.629092 | 7_2:-82373834 | None:intergenic |
| GCATCAATCTCACGTGAGCA+CGG | 0.629640 | 7_2:+82373763 | Msa1082310:CDS |
| TCGGTCACTTAATATCTCGA+GGG | 0.631519 | 7_2:-82376263 | None:intergenic |
| TTAGATGTCCTTGTCCATAG+AGG | 0.637092 | 7_2:+82375481 | Msa1082310:CDS |
| AATAATACGGACAGATACCA+TGG | 0.637561 | 7_2:-82376476 | None:intergenic |
| GGGGAGCCAAAGGTTACCAC+AGG | 0.637612 | 7_2:-82375685 | None:intergenic |
| TCCCCGTCCATCATGTGTGG+AGG | 0.638035 | 7_2:+82375703 | Msa1082310:CDS |
| TTTACTTGGTTATTAAGACA+AGG | 0.638155 | 7_2:-82375877 | None:intergenic |
| CGATCCGCCTATGGACCTGG+AGG | 0.638363 | 7_2:+82376283 | Msa1082310:CDS |
| CTTACACTACGTGCCACAAG+AGG | 0.640501 | 7_2:-82376427 | None:intergenic |
| CGGTCACTTAATATCTCGAG+GGG | 0.642028 | 7_2:-82376262 | None:intergenic |
| TCTTATGCTGCTGATAAGGG+AGG | 0.642092 | 7_2:+82375639 | Msa1082310:CDS |
| TGATGCTTGTGAGATTGCAG+TGG | 0.646322 | 7_2:+82374833 | Msa1082310:CDS |
| AGAACTCAGCCAAATCCGCA+CGG | 0.648030 | 7_2:+82376369 | Msa1082310:CDS |
| GGAGAATGTAAACAGAGTTG+TGG | 0.651308 | 7_2:+82373874 | Msa1082310:CDS |
| GTTCTCTCCTTGCTGCCGTG+CGG | 0.651475 | 7_2:-82376384 | None:intergenic |
| ATTCCTTGAACGTGACTCTG+CGG | 0.654338 | 7_2:-82375754 | None:intergenic |
| ACCTCCACACATGATGGACG+GGG | 0.657981 | 7_2:-82375704 | None:intergenic |
| ATGCACACATGTCTCACTTG+GGG | 0.665122 | 7_2:+82374125 | Msa1082310:CDS |
| GGCCGTCGACGAGGTTACGG+CGG | 0.674397 | 7_2:+82373853 | Msa1082310:CDS |
| TACTTGCATGAAAATGCCCG+TGG | 0.685103 | 7_2:-82375799 | None:intergenic |
| TGCACAGAGACATAGTACCA+CGG | 0.687263 | 7_2:+82375782 | Msa1082310:CDS |
| TGTTTAATCCCTGAAAAGGG+AGG | 0.687911 | 7_2:-82376508 | None:intergenic |
| GTGATGCGGACATTGTTGGT+GGG | 0.700714 | 7_2:+82376449 | Msa1082310:CDS |
| AATCTCACGTGAGCACGGTG+AGG | 0.702468 | 7_2:+82373768 | Msa1082310:CDS |
| GAGAACTAAGACGAAAGGTG+CGG | 0.711212 | 7_2:+82376401 | Msa1082310:CDS |
| TATTAAGACAAGGATGACTG+CGG | 0.711381 | 7_2:-82375867 | None:intergenic |
| TCACATATGAACCATTCACA+GGG | 0.713581 | 7_2:-82375023 | None:intergenic |
| GGCACGTAGTGTAAGTGATG+CGG | 0.720051 | 7_2:+82376435 | Msa1082310:CDS |
| AAAAGATATAGACCACTACC+CGG | 0.728169 | 7_2:-82376157 | None:intergenic |
| AGATATAGACCACTACCCGG+TGG | 0.732749 | 7_2:-82376154 | None:intergenic |
| ATATCAACAGATGTTACCCG+AGG | 0.747249 | 7_2:+82375528 | Msa1082310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGATCTTAATTCTGTA+TGG | + | chr7_2:82373936-82373955 | Msa1082310:CDS | 20.0% |
| !! | ATGAAATAAACCTTGATATT+GGG | - | chr7_2:82374169-82374188 | None:intergenic | 20.0% |
| !! | TTTATACATTAGGAATGTTT+AGG | + | chr7_2:82374230-82374249 | Msa1082310:intron | 20.0% |
| !! | AGAAAATAGATGTGATTAAA+TGG | - | chr7_2:82374355-82374374 | None:intergenic | 20.0% |
| !! | ATTAAAAATGATAGCAAGTT+TGG | + | chr7_2:82375186-82375205 | Msa1082310:intron | 20.0% |
| !!! | TTTTTACTTATATTTAACGC+CGG | - | chr7_2:82375929-82375948 | None:intergenic | 20.0% |
| !! | AACTACAAAAAGAATATCTT+TGG | - | chr7_2:82376013-82376032 | None:intergenic | 20.0% |
| !!! | TCACTAAGATTTAAAATCAA+AGG | - | chr7_2:82376042-82376061 | None:intergenic | 20.0% |
| ! | ACTTTGTGTTTATTACAAAG+TGG | + | chr7_2:82373650-82373669 | Msa1082310:CDS | 25.0% |
| ! | CTTTGTGTTTATTACAAAGT+GGG | + | chr7_2:82373651-82373670 | Msa1082310:CDS | 25.0% |
| ! | ATGAAAATGAAGAAGAGATT+AGG | + | chr7_2:82374041-82374060 | Msa1082310:CDS | 25.0% |
| ! | GATGAAATAAACCTTGATAT+TGG | - | chr7_2:82374170-82374189 | None:intergenic | 25.0% |
| !! | TACAAAAACCTTCATAGTTT+TGG | + | chr7_2:82374268-82374287 | Msa1082310:intron | 25.0% |
| !!! | CATTATTTTTGTTCTTTGAG+TGG | + | chr7_2:82374561-82374580 | Msa1082310:intron | 25.0% |
| !!! | TGCTATGCTAATTTGTATTT+TGG | + | chr7_2:82374641-82374660 | Msa1082310:intron | 25.0% |
| ! | ATTAAGAAAGAAGAAACCAA+TGG | + | chr7_2:82374753-82374772 | Msa1082310:CDS | 25.0% |
| ! | TTAAGAAAGAAGAAACCAAT+GGG | + | chr7_2:82374754-82374773 | Msa1082310:CDS | 25.0% |
| !!! | TACGAGATATTTTGTTATTC+AGG | + | chr7_2:82375061-82375080 | Msa1082310:CDS | 25.0% |
| ! | ATGTTATGTGAATAATCACA+AGG | - | chr7_2:82375152-82375171 | None:intergenic | 25.0% |
| !!! | AGCAAGTTTGGATTTATTTT+TGG | + | chr7_2:82375198-82375217 | Msa1082310:intron | 25.0% |
| ! | GTATCAAAACAATAATTGGT+TGG | - | chr7_2:82375232-82375251 | None:intergenic | 25.0% |
| !!! | AATTATTGTTTTGATACGCA+GGG | + | chr7_2:82375235-82375254 | Msa1082310:intron | 25.0% |
| ! | TGTTTACACTTTGTGAAATT+GGG | + | chr7_2:82375427-82375446 | Msa1082310:intron | 25.0% |
| !!! | AGATACATTTTTTTTCCCTT+AGG | + | chr7_2:82375456-82375475 | Msa1082310:intron | 25.0% |
| !!! | GATACATTTTTTTTCCCTTA+GGG | + | chr7_2:82375457-82375476 | Msa1082310:intron | 25.0% |
| !!! | ATACATTTTTTTTCCCTTAG+GGG | + | chr7_2:82375458-82375477 | Msa1082310:intron | 25.0% |
| ! | TTTACTTGGTTATTAAGACA+AGG | - | chr7_2:82375880-82375899 | None:intergenic | 25.0% |
| !! | ATTATCTGAAATACTTCATC+CGG | + | chr7_2:82375907-82375926 | Msa1082310:intron | 25.0% |
| ! | GGTCATATGTATAAGTAAAA+AGG | - | chr7_2:82375992-82376011 | None:intergenic | 25.0% |
| GCAGTAATAGAAGTGATTAA+AGG | - | chr7_2:82373692-82373711 | None:intergenic | 30.0% | |
| TATGAATCTGTAAAACTTGG+AGG | - | chr7_2:82373807-82373826 | None:intergenic | 30.0% | |
| ! | TCCAAGTTTTACAGATTCAT+AGG | + | chr7_2:82373806-82373825 | Msa1082310:CDS | 30.0% |
| ACCTATGAATCTGTAAAACT+TGG | - | chr7_2:82373810-82373829 | None:intergenic | 30.0% | |
| TCTTAATTCTGTATGGAAAG+AGG | + | chr7_2:82373943-82373962 | Msa1082310:CDS | 30.0% | |
| ATACTCTATTCCCAATATCA+AGG | + | chr7_2:82374156-82374175 | Msa1082310:CDS | 30.0% | |
| ! | GAAAGCATAAAAGGAAATGA+AGG | - | chr7_2:82374192-82374211 | None:intergenic | 30.0% |
| ! | CAAAGACATGAAAGCATAAA+AGG | - | chr7_2:82374201-82374220 | None:intergenic | 30.0% |
| GTGCACTTTCTTTATACATT+AGG | + | chr7_2:82374220-82374239 | Msa1082310:intron | 30.0% | |
| TATCAATGCCAAAACTATGA+AGG | - | chr7_2:82374279-82374298 | None:intergenic | 30.0% | |
| !!! | TCATAGTTTTGGCATTGATA+AGG | + | chr7_2:82374279-82374298 | Msa1082310:intron | 30.0% |
| GAATGTGTTCATCCAAAATT+AGG | + | chr7_2:82374616-82374635 | Msa1082310:intron | 30.0% | |
| ! | TAGCATAGCAATCCTAATTT+TGG | - | chr7_2:82374631-82374650 | None:intergenic | 30.0% |
| AACTTCATCAATAGAGAAGA+AGG | + | chr7_2:82374716-82374735 | Msa1082310:CDS | 30.0% | |
| GAAAGAAAAGAGGAAAAGAA+TGG | + | chr7_2:82374789-82374808 | Msa1082310:CDS | 30.0% | |
| AACATGATAAAAACTGACGT+TGG | + | chr7_2:82374900-82374919 | Msa1082310:CDS | 30.0% | |
| ACATGATAAAAACTGACGTT+GGG | + | chr7_2:82374901-82374920 | Msa1082310:CDS | 30.0% | |
| TTCAGGTATGAAAAATTAGC+AGG | + | chr7_2:82375078-82375097 | Msa1082310:intron | 30.0% | |
| TCAGGTATGAAAAATTAGCA+GGG | + | chr7_2:82375079-82375098 | Msa1082310:intron | 30.0% | |
| CTGCGTATCAAAACAATAAT+TGG | - | chr7_2:82375236-82375255 | None:intergenic | 30.0% | |
| !!! | CAATTATTGTTTTGATACGC+AGG | + | chr7_2:82375234-82375253 | Msa1082310:intron | 30.0% |
| ACAATTACCTCAAATTGAAC+TGG | - | chr7_2:82375304-82375323 | None:intergenic | 30.0% | |
| AAATTCATCCCTTTAACAAG+AGG | - | chr7_2:82375364-82375383 | None:intergenic | 30.0% | |
| GTGTTTACACTTTGTGAAAT+TGG | + | chr7_2:82375426-82375445 | Msa1082310:intron | 30.0% | |
| TAAATCTTATGCTGCTGATA+AGG | + | chr7_2:82375635-82375654 | Msa1082310:CDS | 30.0% | |
| AAATCTTATGCTGCTGATAA+GGG | + | chr7_2:82375636-82375655 | Msa1082310:CDS | 30.0% | |
| CTAGGTGAAAAAATTTCATC+TGG | - | chr7_2:82376121-82376140 | None:intergenic | 30.0% | |
| ! | CATTTGATTCTGAAAGAAGA+GGG | - | chr7_2:82376189-82376208 | None:intergenic | 30.0% |
| ! | TCATTTGATTCTGAAAGAAG+AGG | - | chr7_2:82376190-82376209 | None:intergenic | 30.0% |
| TACAAACAGTTGCATATGTT+GGG | - | chr7_2:82376578-82376597 | None:intergenic | 30.0% | |
| TTATTACAAAGTGGGATTCC+TGG | + | chr7_2:82373659-82373678 | Msa1082310:CDS | 35.0% | |
| AAGAAGGAGATGGAGAAAAT+GGG | + | chr7_2:82373897-82373916 | Msa1082310:CDS | 35.0% | |
| TGGAAAGAGGAAAAAAAGAG+TGG | + | chr7_2:82373956-82373975 | Msa1082310:CDS | 35.0% | |
| !! | TGTTTGTAGAGTTGATGAAG+AGG | + | chr7_2:82374003-82374022 | Msa1082310:CDS | 35.0% |
| !!! | GTTTTCTAGAATGCTTCGTA+GGG | + | chr7_2:82374078-82374097 | Msa1082310:CDS | 35.0% |
| GCATTTATATGCCAGACTAA+AGG | + | chr7_2:82374301-82374320 | Msa1082310:intron | 35.0% | |
| ! | GTGTTTGATACCTGATTTGT+AGG | + | chr7_2:82374422-82374441 | Msa1082310:intron | 35.0% |
| AAACATGCAATCTTAGAGCA+AGG | - | chr7_2:82374462-82374481 | None:intergenic | 35.0% | |
| ! | TTTGTGACCTGATTGATGAT+CGG | + | chr7_2:82374496-82374515 | Msa1082310:intron | 35.0% |
| CTATATTCCGATCATCAATC+AGG | - | chr7_2:82374506-82374525 | None:intergenic | 35.0% | |
| TTGAGTGGAATTCAATTGTG+TGG | + | chr7_2:82374576-82374595 | Msa1082310:intron | 35.0% | |
| ATCAATAGAGAAGAAGGAAC+TGG | + | chr7_2:82374722-82374741 | Msa1082310:CDS | 35.0% | |
| ! | CTTTTCCTCTTTTCTTTCTC+CGG | - | chr7_2:82374787-82374806 | None:intergenic | 35.0% |
| AACAACTGCTGTCATTGAAT+TGG | - | chr7_2:82374943-82374962 | None:intergenic | 35.0% | |
| TCACATATGAACCATTCACA+GGG | - | chr7_2:82375026-82375045 | None:intergenic | 35.0% | |
| CAGGTATGAAAAATTAGCAG+GGG | + | chr7_2:82375080-82375099 | Msa1082310:intron | 35.0% | |
| ! | ATTGAACTGGCTCAAAAAGT+AGG | - | chr7_2:82375291-82375310 | None:intergenic | 35.0% |
| ! | TTTTGAGCCAGTTCAATTTG+AGG | + | chr7_2:82375294-82375313 | Msa1082310:CDS | 35.0% |
| GAGGTAATTGTTACTATTGC+AGG | + | chr7_2:82375313-82375332 | Msa1082310:intron | 35.0% | |
| ATGCGATTCCTCTTGTTAAA+GGG | + | chr7_2:82375353-82375372 | Msa1082310:intron | 35.0% | |
| ACCTAAAATCTCAAGGTTCT+CGG | + | chr7_2:82375560-82375579 | Msa1082310:CDS | 35.0% | |
| ACAGGAAGCAAAGAAGAAAT+AGG | - | chr7_2:82375670-82375689 | None:intergenic | 35.0% | |
| TATTTCTTCTTTGCTTCCTG+TGG | + | chr7_2:82375669-82375688 | Msa1082310:CDS | 35.0% | |
| TATTAAGACAAGGATGACTG+CGG | - | chr7_2:82375870-82375889 | None:intergenic | 35.0% | |
| AGATAATGTCGCACTTTACT+TGG | - | chr7_2:82375894-82375913 | None:intergenic | 35.0% | |
| AAAAGATATAGACCACTACC+CGG | - | chr7_2:82376160-82376179 | None:intergenic | 35.0% | |
| ! | AGTGGTCTATATCTTTTGAG+TGG | + | chr7_2:82376163-82376182 | Msa1082310:CDS | 35.0% |
| AATAATACGGACAGATACCA+TGG | - | chr7_2:82376479-82376498 | None:intergenic | 35.0% | |
| GTCTGTTTAATCCCTGAAAA+GGG | - | chr7_2:82376514-82376533 | None:intergenic | 35.0% | |
| TGTCTGTTTAATCCCTGAAA+AGG | - | chr7_2:82376515-82376534 | None:intergenic | 35.0% | |
| !! | TTTTCAGGGATTAAACAGAC+AGG | + | chr7_2:82376514-82376533 | Msa1082310:CDS | 35.0% |
| AGTCCTTGAAAAGGTTTAGT+AGG | + | chr7_2:82376542-82376561 | Msa1082310:CDS | 35.0% | |
| ! | AAGCCTACTAAACCTTTTCA+AGG | - | chr7_2:82376548-82376567 | None:intergenic | 35.0% |
| CTACAAACAGTTGCATATGT+TGG | - | chr7_2:82376579-82376598 | None:intergenic | 35.0% | |
| GTGATTAAAGGAACGATACC+AGG | - | chr7_2:82373680-82373699 | None:intergenic | 40.0% | |
| GGAGAATGTAAACAGAGTTG+TGG | + | chr7_2:82373874-82373893 | Msa1082310:CDS | 40.0% | |
| GTAAACAGAGTTGTGGAAGA+AGG | + | chr7_2:82373881-82373900 | Msa1082310:CDS | 40.0% | |
| GAAGAAGGAGATGGAGAAAA+TGG | + | chr7_2:82373896-82373915 | Msa1082310:CDS | 40.0% | |
| AGATGGAGAAAATGGGAACT+GGG | + | chr7_2:82373904-82373923 | Msa1082310:CDS | 40.0% | |
| ! | AAATGGGAACTGGGTTTTCA+AGG | + | chr7_2:82373913-82373932 | Msa1082310:CDS | 40.0% |
| !!! | CGTTTTCTAGAATGCTTCGT+AGG | + | chr7_2:82374077-82374096 | Msa1082310:CDS | 40.0% |
| TATGCACACATGTCTCACTT+GGG | + | chr7_2:82374124-82374143 | Msa1082310:CDS | 40.0% | |
| ! | ACCTGATTTGTAGGCTTTGT+TGG | + | chr7_2:82374431-82374450 | Msa1082310:intron | 40.0% |
| TCCAACAAAGCCTACAAATC+AGG | - | chr7_2:82374435-82374454 | None:intergenic | 40.0% | |
| ! | GATCGGAATATAGTTCTGCT+AGG | + | chr7_2:82374513-82374532 | Msa1082310:intron | 40.0% |
| GTTCTGCTAGGAAGATATGT+AGG | + | chr7_2:82374525-82374544 | Msa1082310:intron | 40.0% | |
| AGGAAGATATGTAGGTCAGT+AGG | + | chr7_2:82374533-82374552 | Msa1082310:intron | 40.0% | |
| AAGATATGTAGGTCAGTAGG+TGG | + | chr7_2:82374536-82374555 | Msa1082310:intron | 40.0% | |
| AGATATGTAGGTCAGTAGGT+GGG | + | chr7_2:82374537-82374556 | Msa1082310:intron | 40.0% | |
| TTGGAACTGTGAATTTAGCC+AGG | + | chr7_2:82374660-82374679 | Msa1082310:intron | 40.0% | |
| TGGAACTGTGAATTTAGCCA+GGG | + | chr7_2:82374661-82374680 | Msa1082310:intron | 40.0% | |
| GTCACATATGAACCATTCAC+AGG | - | chr7_2:82375027-82375046 | None:intergenic | 40.0% | |
| GTTCAGAGTCATTTGAATCC+TGG | + | chr7_2:82375257-82375276 | Msa1082310:CDS | 40.0% | |
| GATGCGATTCCTCTTGTTAA+AGG | + | chr7_2:82375352-82375371 | Msa1082310:intron | 40.0% | |
| TTAGATGTCCTTGTCCATAG+AGG | + | chr7_2:82375481-82375500 | Msa1082310:CDS | 40.0% | |
| CATAGATACCTCTATGGACA+AGG | - | chr7_2:82375492-82375511 | None:intergenic | 40.0% | |
| !! | TGTCCATAGAGGTATCTATG+AGG | + | chr7_2:82375492-82375511 | Msa1082310:CDS | 40.0% |
| GTATCTATGAGGCTGCTAAA+GGG | + | chr7_2:82375503-82375522 | Msa1082310:CDS | 40.0% | |
| ATATCAACAGATGTTACCCG+AGG | + | chr7_2:82375528-82375547 | Msa1082310:CDS | 40.0% | |
| !! | TTTTAGGTGAGCATGAACCT+CGG | - | chr7_2:82375548-82375567 | None:intergenic | 40.0% |
| CATGCTCACCTAAAATCTCA+AGG | + | chr7_2:82375553-82375572 | Msa1082310:CDS | 40.0% | |
| CCTAAAATCTCAAGGTTCTC+GGG | + | chr7_2:82375561-82375580 | Msa1082310:CDS | 40.0% | |
| GTAATTCTGCGACATGGTTA+GGG | - | chr7_2:82375825-82375844 | None:intergenic | 40.0% | |
| AGTAATTCTGCGACATGGTT+AGG | - | chr7_2:82375826-82375845 | None:intergenic | 40.0% | |
| CCTTTAGTAATTCTGCGACA+TGG | - | chr7_2:82375831-82375850 | None:intergenic | 40.0% | |
| CCATGTCGCAGAATTACTAA+AGG | + | chr7_2:82375828-82375847 | Msa1082310:CDS | 40.0% | |
| AGAATCAGTAATTCGCCCAT+CGG | - | chr7_2:82376094-82376113 | None:intergenic | 40.0% | |
| TCGGTCACTTAATATCTCGA+GGG | - | chr7_2:82376266-82376285 | None:intergenic | 40.0% | |
| ATCGGTCACTTAATATCTCG+AGG | - | chr7_2:82376267-82376286 | None:intergenic | 40.0% | |
| CATGTCATGATCTCTGTGTA+TGG | - | chr7_2:82376311-82376330 | None:intergenic | 40.0% | |
| AAGGAGAGAACTAAGACGAA+AGG | + | chr7_2:82376396-82376415 | Msa1082310:CDS | 40.0% | |
| !! | GAGGCTGGTCTTGAATAATA+CGG | - | chr7_2:82376492-82376511 | None:intergenic | 40.0% |
| TGTTTAATCCCTGAAAAGGG+AGG | - | chr7_2:82376511-82376530 | None:intergenic | 40.0% | |
| CAGGTAGAAAGTCCTTGAAA+AGG | + | chr7_2:82376533-82376552 | Msa1082310:CDS | 40.0% | |
| ATGCACGTGAACGTGATCAT+TGG | - | chr7_2:82373747-82373766 | None:intergenic | 45.0% | |
| AGAGTTGTGGAAGAAGGAGA+TGG | + | chr7_2:82373887-82373906 | Msa1082310:CDS | 45.0% | |
| GAGATGGAGAAAATGGGAAC+TGG | + | chr7_2:82373903-82373922 | Msa1082310:CDS | 45.0% | |
| GTATGCACACATGTCTCACT+TGG | + | chr7_2:82374123-82374142 | Msa1082310:CDS | 45.0% | |
| ATGCACACATGTCTCACTTG+GGG | + | chr7_2:82374125-82374144 | Msa1082310:CDS | 45.0% | |
| CATGTCTCACTTGGGGAATT+TGG | + | chr7_2:82374132-82374151 | Msa1082310:CDS | 45.0% | |
| GATATGTAGGTCAGTAGGTG+GGG | + | chr7_2:82374538-82374557 | Msa1082310:intron | 45.0% | |
| GAAACCAATGGGAAAGATGC+CGG | + | chr7_2:82374765-82374784 | Msa1082310:CDS | 45.0% | |
| AGATGCCGGAGAAAGAAAAG+AGG | + | chr7_2:82374779-82374798 | Msa1082310:CDS | 45.0% | |
| TGATGCTTGTGAGATTGCAG+TGG | + | chr7_2:82374833-82374852 | Msa1082310:CDS | 45.0% | |
| TGTGAGATTGCAGTGGTTGA+AGG | + | chr7_2:82374840-82374859 | Msa1082310:CDS | 45.0% | |
| GTGGTTGAAGGTTCACTTGA+AGG | + | chr7_2:82374852-82374871 | Msa1082310:CDS | 45.0% | |
| AACTGACGTTGGGTCTTTGA+TGG | + | chr7_2:82374911-82374930 | Msa1082310:CDS | 45.0% | |
| CAAGTTCTTCACCCTGTGAA+TGG | + | chr7_2:82375012-82375031 | Msa1082310:CDS | 45.0% | |
| AGAGTCATTTGAATCCTGGC+AGG | + | chr7_2:82375261-82375280 | Msa1082310:CDS | 45.0% | |
| AAAAAGTAGGTTTGCCTGCC+AGG | - | chr7_2:82375278-82375297 | None:intergenic | 45.0% | |
| CAAGGACATCTAACCCCTAA+GGG | - | chr7_2:82375474-82375493 | None:intergenic | 45.0% | |
| ACAAGGACATCTAACCCCTA+AGG | - | chr7_2:82375475-82375494 | None:intergenic | 45.0% | |
| CAGCCTCATAGATACCTCTA+TGG | - | chr7_2:82375498-82375517 | None:intergenic | 45.0% | |
| GGTATCTATGAGGCTGCTAA+AGG | + | chr7_2:82375502-82375521 | Msa1082310:CDS | 45.0% | |
| TTTAGGTGAGCATGAACCTC+GGG | - | chr7_2:82375547-82375566 | None:intergenic | 45.0% | |
| ! | CCCGAGAACCTTGAGATTTT+AGG | - | chr7_2:82375564-82375583 | None:intergenic | 45.0% |
| CAAGAGAATGGCCAGTGAAA+CGG | - | chr7_2:82375594-82375613 | None:intergenic | 45.0% | |
| GTTTCACTGGCCATTCTCTT+GGG | + | chr7_2:82375593-82375612 | Msa1082310:CDS | 45.0% | |
| TTTCACTGGCCATTCTCTTG+GGG | + | chr7_2:82375594-82375613 | Msa1082310:CDS | 45.0% | |
| TCTTATGCTGCTGATAAGGG+AGG | + | chr7_2:82375639-82375658 | Msa1082310:CDS | 45.0% | |
| TTGCTTCCTGTGGTAACCTT+TGG | + | chr7_2:82375679-82375698 | Msa1082310:CDS | 45.0% | |
| ATTCCTTGAACGTGACTCTG+CGG | - | chr7_2:82375757-82375776 | None:intergenic | 45.0% | |
| TGCACAGAGACATAGTACCA+CGG | + | chr7_2:82375782-82375801 | Msa1082310:CDS | 45.0% | |
| TACTTGCATGAAAATGCCCG+TGG | - | chr7_2:82375802-82375821 | None:intergenic | 45.0% | |
| ! | AAGCTGCTATATGCACCGAT+GGG | + | chr7_2:82376076-82376095 | Msa1082310:CDS | 45.0% |
| TAGCCATCATCTTCTTCCAC+CGG | + | chr7_2:82376138-82376157 | Msa1082310:CDS | 45.0% | |
| !! | CCAATTTAGCAGCTTTGAGC+TGG | - | chr7_2:82376222-82376241 | None:intergenic | 45.0% |
| CCAGCTCAAAGCTGCTAAAT+TGG | + | chr7_2:82376219-82376238 | Msa1082310:CDS | 45.0% | |
| CTTAATATCTCGAGGGGATG+TGG | - | chr7_2:82376259-82376278 | None:intergenic | 45.0% | |
| CGGTCACTTAATATCTCGAG+GGG | - | chr7_2:82376265-82376284 | None:intergenic | 45.0% | |
| GAGAACTAAGACGAAAGGTG+CGG | + | chr7_2:82376401-82376420 | Msa1082310:CDS | 45.0% | |
| GTAAGTGATGCGGACATTGT+TGG | + | chr7_2:82376445-82376464 | Msa1082310:CDS | 45.0% | |
| GTGTTCTTGCTTCCTACTCT+CGG | + | chr7_2:82376598-82376617 | Msa1082310:CDS | 45.0% | |
| GCATCAATCTCACGTGAGCA+CGG | + | chr7_2:82373763-82373782 | Msa1082310:CDS | 50.0% | |
| CTCCGCCAGAAACAATTACC+TGG | + | chr7_2:82373832-82373851 | Msa1082310:CDS | 50.0% | |
| !! | GGCCAGGTAATTGTTTCTGG+CGG | - | chr7_2:82373837-82373856 | None:intergenic | 50.0% |
| GACGGCCAGGTAATTGTTTC+TGG | - | chr7_2:82373840-82373859 | None:intergenic | 50.0% | |
| CACTGTACACGCCTTTAGTC+TGG | - | chr7_2:82374315-82374334 | None:intergenic | 50.0% | |
| AGCCAGGGAACCTCTTGAAA+AGG | + | chr7_2:82374676-82374695 | Msa1082310:intron | 50.0% | |
| !! | CACCTTTTCAAGAGGTTCCC+TGG | - | chr7_2:82374681-82374700 | None:intergenic | 50.0% |
| GGGAACCTCTTGAAAAGGTG+TGG | + | chr7_2:82374681-82374700 | Msa1082310:CDS | 50.0% | |
| !! | GCAGACCACACCTTTTCAAG+AGG | - | chr7_2:82374689-82374708 | None:intergenic | 50.0% |
| TTCTCCGGCATCTTTCCCAT+TGG | - | chr7_2:82374772-82374791 | None:intergenic | 50.0% | |
| CGTTTCACTGGCCATTCTCT+TGG | + | chr7_2:82375592-82375611 | Msa1082310:CDS | 50.0% | |
| TTCACTGGCCATTCTCTTGG+GGG | + | chr7_2:82375595-82375614 | Msa1082310:CDS | 50.0% | |
| ! | TCACCTCCACACATGATGGA+CGG | - | chr7_2:82375709-82375728 | None:intergenic | 50.0% |
| ACGATCACCTCCACACATGA+TGG | - | chr7_2:82375713-82375732 | None:intergenic | 50.0% | |
| GATCGTCTGCTCGAAAAGCT+AGG | + | chr7_2:82375727-82375746 | Msa1082310:CDS | 50.0% | |
| TTACCGCAGAGTCACGTTCA+AGG | + | chr7_2:82375751-82375770 | Msa1082310:CDS | 50.0% | |
| GCACAGAGACATAGTACCAC+GGG | + | chr7_2:82375783-82375802 | Msa1082310:CDS | 50.0% | |
| ACAAGGATGACTGCGGAAAC+TGG | - | chr7_2:82375863-82375882 | None:intergenic | 50.0% | |
| GAAGCTGCTATATGCACCGA+TGG | + | chr7_2:82376075-82376094 | Msa1082310:intron | 50.0% | |
| ! | GGTGGAAGAAGATGATGGCT+AGG | - | chr7_2:82376139-82376158 | None:intergenic | 50.0% |
| AGCCATCATCTTCTTCCACC+GGG | + | chr7_2:82376139-82376158 | Msa1082310:CDS | 50.0% | |
| TACCCGGTGGAAGAAGATGA+TGG | - | chr7_2:82376144-82376163 | None:intergenic | 50.0% | |
| AGATATAGACCACTACCCGG+TGG | - | chr7_2:82376157-82376176 | None:intergenic | 50.0% | |
| TTAAGTGACCGATCCGCCTA+TGG | + | chr7_2:82376274-82376293 | Msa1082310:CDS | 50.0% | |
| GCTGAGTTCTTGGCGAATCA+CGG | - | chr7_2:82376359-82376378 | None:intergenic | 50.0% | |
| TGCGGATTTGGCTGAGTTCT+TGG | - | chr7_2:82376369-82376388 | None:intergenic | 50.0% | |
| AGAACTCAGCCAAATCCGCA+CGG | + | chr7_2:82376369-82376388 | Msa1082310:CDS | 50.0% | |
| ! | AACTAAGACGAAAGGTGCGG+TGG | + | chr7_2:82376404-82376423 | Msa1082310:CDS | 50.0% |
| CTTACACTACGTGCCACAAG+AGG | - | chr7_2:82376430-82376449 | None:intergenic | 50.0% | |
| GGCACGTAGTGTAAGTGATG+CGG | + | chr7_2:82376435-82376454 | Msa1082310:CDS | 50.0% | |
| AGTGATGCGGACATTGTTGG+TGG | + | chr7_2:82376448-82376467 | Msa1082310:CDS | 50.0% | |
| GTGATGCGGACATTGTTGGT+GGG | + | chr7_2:82376449-82376468 | Msa1082310:CDS | 50.0% | |
| ! | CATTGTTGGTGGGAGATCCA+TGG | + | chr7_2:82376459-82376478 | Msa1082310:CDS | 50.0% |
| ! | AAGACCAGCCTCCCTTTTCA+GGG | + | chr7_2:82376500-82376519 | Msa1082310:CDS | 50.0% |
| TAATCCCTGAAAAGGGAGGC+TGG | - | chr7_2:82376507-82376526 | None:intergenic | 50.0% | |
| AATCTCACGTGAGCACGGTG+AGG | + | chr7_2:82373768-82373787 | Msa1082310:CDS | 55.0% | |
| CGGGCAACTTTCCGTTTCAC+TGG | + | chr7_2:82375580-82375599 | Msa1082310:CDS | 55.0% | |
| CCAAGCTTCCCCCAAGAGAA+TGG | - | chr7_2:82375606-82375625 | None:intergenic | 55.0% | |
| CCATTCTCTTGGGGGAAGCT+TGG | + | chr7_2:82375603-82375622 | Msa1082310:CDS | 55.0% | |
| !! | ACCTCCACACATGATGGACG+GGG | - | chr7_2:82375707-82375726 | None:intergenic | 55.0% |
| !! | CACCTCCACACATGATGGAC+GGG | - | chr7_2:82375708-82375727 | None:intergenic | 55.0% |
| CATCTTCTTCCACCGGGTAG+TGG | + | chr7_2:82376145-82376164 | Msa1082310:CDS | 55.0% | |
| TATGGCTCCTCCAGGTCCAT+AGG | - | chr7_2:82376293-82376312 | None:intergenic | 55.0% | |
| TCTCTGTGTATGGCTCCTCC+AGG | - | chr7_2:82376301-82376320 | None:intergenic | 55.0% | |
| ! | CAAGACCAGCCTCCCTTTTC+AGG | + | chr7_2:82376499-82376518 | Msa1082310:CDS | 55.0% |
| CAATTACCTGGCCGTCGACG+AGG | + | chr7_2:82373844-82373863 | Msa1082310:CDS | 60.0% | |
| GGGGAGCCAAAGGTTACCAC+AGG | - | chr7_2:82375688-82375707 | None:intergenic | 60.0% | |
| !! | CATGATGGACGGGGAGCCAA+AGG | - | chr7_2:82375698-82375717 | None:intergenic | 60.0% |
| TCCCCGTCCATCATGTGTGG+AGG | + | chr7_2:82375703-82375722 | Msa1082310:CDS | 60.0% | |
| CTCCAGGTCCATAGGCGGAT+CGG | - | chr7_2:82376285-82376304 | None:intergenic | 60.0% | |
| TCCTTGCTGCCGTGCGGATT+TGG | - | chr7_2:82376381-82376400 | None:intergenic | 60.0% | |
| GTTCTCTCCTTGCTGCCGTG+CGG | - | chr7_2:82376387-82376406 | None:intergenic | 60.0% | |
| ! | AAAGGTGCGGTGGCCTCTTG+TGG | + | chr7_2:82376414-82376433 | Msa1082310:CDS | 60.0% |
| CCTGGCCGTCGACGAGGTTA+CGG | + | chr7_2:82373850-82373869 | Msa1082310:CDS | 65.0% | |
| CTCCGCCGTAACCTCGTCGA+CGG | - | chr7_2:82373858-82373877 | None:intergenic | 65.0% | |
| GGCTCCCCGTCCATCATGTG+TGG | + | chr7_2:82375700-82375719 | Msa1082310:CDS | 65.0% | |
| GACCGATCCGCCTATGGACC+TGG | + | chr7_2:82376280-82376299 | Msa1082310:CDS | 65.0% | |
| CGATCCGCCTATGGACCTGG+AGG | + | chr7_2:82376283-82376302 | Msa1082310:CDS | 65.0% | |
| GGCTCCTCCAGGTCCATAGG+CGG | - | chr7_2:82376290-82376309 | None:intergenic | 65.0% | |
| GCCAAATCCGCACGGCAGCA+AGG | + | chr7_2:82376377-82376396 | Msa1082310:CDS | 65.0% | |
| CCGTAACCTCGTCGACGGCC+AGG | - | chr7_2:82373853-82373872 | None:intergenic | 70.0% | |
| GGCCGTCGACGAGGTTACGG+CGG | + | chr7_2:82373853-82373872 | Msa1082310:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82373644 | 82376630 | 82373644 | ID=Msa1082310;Name=Msa1082310 |
| chr7_2 | mRNA | 82373644 | 82376630 | 82373644 | ID=Msa1082310-mRNA-1;Parent=Msa1082310;Name=Msa1082310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|5|0|656 |
| chr7_2 | exon | 82373644 | 82374177 | 82373644 | ID=Msa1082310-mRNA-1:exon:21291;Parent=Msa1082310-mRNA-1 |
| chr7_2 | exon | 82374678 | 82375082 | 82374678 | ID=Msa1082310-mRNA-1:exon:21292;Parent=Msa1082310-mRNA-1 |
| chr7_2 | exon | 82375256 | 82375315 | 82375256 | ID=Msa1082310-mRNA-1:exon:21293;Parent=Msa1082310-mRNA-1 |
| chr7_2 | exon | 82375478 | 82375894 | 82375478 | ID=Msa1082310-mRNA-1:exon:21294;Parent=Msa1082310-mRNA-1 |
| chr7_2 | exon | 82376076 | 82376630 | 82376076 | ID=Msa1082310-mRNA-1:exon:21295;Parent=Msa1082310-mRNA-1 |
| chr7_2 | CDS | 82373644 | 82374177 | 82373644 | ID=Msa1082310-mRNA-1:cds;Parent=Msa1082310-mRNA-1 |
| chr7_2 | CDS | 82374678 | 82375082 | 82374678 | ID=Msa1082310-mRNA-1:cds;Parent=Msa1082310-mRNA-1 |
| chr7_2 | CDS | 82375256 | 82375315 | 82375256 | ID=Msa1082310-mRNA-1:cds;Parent=Msa1082310-mRNA-1 |
| chr7_2 | CDS | 82375478 | 82375894 | 82375478 | ID=Msa1082310-mRNA-1:cds;Parent=Msa1082310-mRNA-1 |
| chr7_2 | CDS | 82376076 | 82376630 | 82376076 | ID=Msa1082310-mRNA-1:cds;Parent=Msa1082310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
