AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1048950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048950 MtrunA17_Chr7g0217581 88.934 488 42 4 1 478 98 583 0.0 867
Msa1048950 MtrunA17_Chr6g0453321 56.313 499 193 9 1 478 1 495 1.73e-171 491
Msa1048950 MtrunA17_Chr4g0042481 42.771 498 228 13 1 476 1 463 5.45e-110 333
Msa1048950 MtrunA17_Chr3g0092111 39.464 522 215 19 1 478 1 465 5.90e-89 279
Msa1048950 MtrunA17_Chr5g0417601 38.037 489 176 17 4 476 2 379 2.38e-69 226
Msa1048950 MtrunA17_Chr8g0355261 35.020 494 238 21 3 477 9 438 6.35e-67 221
Msa1048950 MtrunA17_Chr5g0417561 36.100 482 177 20 4 476 2 361 1.48e-64 213
Msa1048950 MtrunA17_Chr5g0417551 36.326 479 188 20 4 476 2 369 2.21e-62 207
Msa1048950 MtrunA17_Chr7g0254161 34.651 430 195 14 79 477 49 423 2.65e-50 177
Msa1048950 MtrunA17_Chr5g0417571 41.434 251 120 7 6 239 4 244 1.27e-40 148
Msa1048950 MtrunA17_Chr6g0460731 36.458 288 99 9 2 254 7 245 9.41e-40 147
Msa1048950 MtrunA17_Chr6g0460721 64.211 95 34 0 96 190 48 142 3.57e-37 139
Msa1048950 MtrunA17_Chr2g0283811 83.333 60 10 0 131 190 41 100 2.78e-33 123
Msa1048950 MtrunA17_Chr3g0127201 66.667 60 20 0 134 193 24 83 8.84e-25 103
Msa1048950 MtrunA17_Chr8g0374111 68.966 58 18 0 137 194 29 86 1.76e-24 101
Msa1048950 MtrunA17_Chr8g0346551 66.102 59 20 0 132 190 19 77 3.86e-24 101
Msa1048950 MtrunA17_Chr8g0374251 75.472 53 13 0 139 191 70 122 3.94e-24 103
Msa1048950 MtrunA17_Chr2g0326001 56.098 82 28 1 109 190 20 93 4.48e-24 102
Msa1048950 MtrunA17_Chr4g0061761 71.698 53 15 0 135 187 38 90 4.83e-24 102
Msa1048950 MtrunA17_Chr1g0177251 59.211 76 30 1 132 206 6 81 5.48e-24 101
Msa1048950 MtrunA17_Chr8g0341671 73.077 52 14 0 137 188 20 71 6.63e-24 99.8
Msa1048950 MtrunA17_Chr2g0308011 75.510 49 12 0 137 185 37 85 8.99e-24 99.0
Msa1048950 MtrunA17_Chr4g0010151 61.290 62 24 0 129 190 74 135 1.00e-23 102
Msa1048950 MtrunA17_Chr4g0047001 47.222 108 41 3 94 190 6 108 1.06e-23 102
Msa1048950 MtrunA17_Chr7g0223311 41.176 119 68 2 87 204 28 145 1.73e-23 101
Msa1048950 MtrunA17_Chr2g0328021 66.667 57 19 0 139 195 64 120 1.79e-23 100
Msa1048950 MtrunA17_Chr8g0367161 52.000 75 36 0 116 190 11 85 2.97e-23 100
Msa1048950 MtrunA17_Chr4g0030051 66.154 65 21 1 126 189 29 93 4.20e-23 99.0
Msa1048950 MtrunA17_Chr3g0126201 68.421 57 17 1 135 190 48 104 7.09e-23 99.4
Msa1048950 MtrunA17_Chr1g0188851 67.925 53 17 0 137 189 43 95 8.57e-23 98.2
Msa1048950 MtrunA17_Chr4g0031411 63.333 60 22 0 130 189 68 127 1.26e-22 98.6
Msa1048950 MtrunA17_Chr2g0282051 74.074 54 13 1 137 190 46 98 5.85e-22 95.5
Msa1048950 MtrunA17_Chr5g0411951 65.455 55 19 0 133 187 39 93 7.15e-22 96.7
Msa1048950 MtrunA17_Chr2g0282441 72.000 50 14 0 139 188 27 76 1.14e-21 95.9
Msa1048950 MtrunA17_Chr2g0282511 73.469 49 13 0 137 185 45 93 1.70e-21 94.7
Msa1048950 MtrunA17_Chr4g0047761 69.231 52 16 0 139 190 74 125 1.74e-21 95.1
Msa1048950 MtrunA17_Chr7g0237921 69.231 52 16 0 139 190 78 129 1.77e-21 95.5
Msa1048950 MtrunA17_Chr3g0117601 59.091 66 26 1 123 187 46 111 3.36e-21 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048950 AT5G39660.3 40.741 513 206 18 6 478 3 457 1.91e-89 281
Msa1048950 AT5G39660.1 40.741 513 206 18 6 478 3 457 1.91e-89 281
Msa1048950 AT5G39660.2 40.741 513 206 18 6 478 3 457 1.91e-89 281
Msa1048950 AT3G47500.1 40.606 495 225 23 1 476 2 446 1.40e-80 257
Msa1048950 AT5G62430.1 37.859 383 131 15 99 476 16 296 4.03e-55 186
Msa1048950 AT1G69570.1 32.998 497 212 20 1 477 1 396 5.42e-50 176
Msa1048950 AT1G26790.1 31.400 500 185 25 1 477 7 371 1.13e-38 144
Msa1048950 AT1G29160.1 85.000 60 9 0 131 190 56 115 5.56e-35 129
Msa1048950 AT2G34140.1 81.667 60 11 0 131 190 52 111 4.72e-33 123
Msa1048950 AT5G60200.1 58.333 72 30 0 133 204 51 122 2.01e-25 105
Msa1048950 AT3G45610.1 45.263 95 52 0 102 196 5 99 4.41e-25 103
Msa1048950 AT5G60850.1 73.214 56 15 0 137 192 51 106 5.85e-25 105
Msa1048950 AT1G51700.1 68.421 57 18 0 137 193 33 89 1.94e-24 100
Msa1048950 AT3G61850.2 60.870 69 27 0 125 193 50 118 3.01e-24 102
Msa1048950 AT3G61850.3 60.870 69 27 0 125 193 50 118 3.01e-24 102
Msa1048950 AT3G61850.1 60.870 69 27 0 125 193 62 130 3.68e-24 102
Msa1048950 AT3G61850.5 60.870 69 27 0 125 193 50 118 4.91e-24 102
Msa1048950 AT3G61850.4 60.870 69 27 0 125 193 62 130 5.27e-24 102
Msa1048950 AT3G50410.1 68.966 58 18 0 137 194 30 87 7.43e-24 100
Msa1048950 AT3G55370.1 65.000 60 21 0 133 192 72 131 1.28e-23 101
Msa1048950 AT3G55370.2 65.000 60 21 0 133 192 72 131 1.40e-23 102
Msa1048950 AT4G24060.1 68.421 57 18 0 134 190 50 106 1.42e-23 102
Msa1048950 AT3G21270.1 76.471 51 12 0 139 189 31 81 1.45e-23 98.6
Msa1048950 AT3G55370.3 65.000 60 21 0 133 192 117 176 1.64e-23 102
Msa1048950 AT2G28510.1 67.797 59 19 0 139 197 50 108 1.73e-23 100
Msa1048950 AT1G07640.1 68.333 60 18 1 139 197 23 82 1.84e-23 100
Msa1048950 AT1G07640.2 68.333 60 18 1 139 197 79 138 2.88e-23 100
Msa1048950 AT1G07640.3 68.333 60 18 1 139 197 87 146 3.47e-23 100
Msa1048950 AT4G38000.1 55.844 77 29 2 136 211 40 112 4.50e-23 98.6
Msa1048950 AT2G28810.2 62.295 61 23 0 128 188 68 128 5.45e-23 99.8
Msa1048950 AT2G37590.1 56.061 66 29 0 125 190 77 142 6.36e-23 99.8
Msa1048950 AT5G66940.1 35.393 178 90 6 137 291 32 207 7.42e-23 97.4
Msa1048950 AT2G28810.1 62.295 61 23 0 128 188 85 145 7.86e-23 99.8
Msa1048950 AT1G28310.1 72.222 54 15 0 137 190 27 80 1.09e-22 99.0
Msa1048950 AT1G28310.2 72.222 54 15 0 137 190 51 104 1.73e-22 98.6
Msa1048950 AT3G52440.2 43.299 97 49 2 111 201 12 108 2.11e-22 97.1
Msa1048950 AT5G65590.1 67.857 56 18 0 137 192 41 96 2.29e-22 97.8
Msa1048950 AT1G64620.1 67.308 52 17 0 134 185 46 97 2.91e-22 98.2
Msa1048950 AT3G52440.1 57.353 68 28 1 135 201 22 89 3.17e-22 95.9
Msa1048950 AT1G21340.1 64.286 56 20 0 139 194 40 95 4.06e-22 95.9
Msa1048950 AT4G00940.1 64.407 59 21 0 132 190 63 121 1.18e-21 95.5
Msa1048950 AT4G00940.3 64.407 59 21 0 132 190 63 121 1.18e-21 95.5
Msa1048950 AT4G00940.2 64.407 59 21 0 132 190 63 121 1.18e-21 95.5
Msa1048950 AT1G47655.1 71.429 49 14 0 137 185 29 77 1.21e-21 93.2
Msa1048950 AT5G02460.1 63.793 58 21 0 133 190 91 148 1.87e-21 96.7
Msa1048950 AT2G46590.1 42.268 97 55 1 88 184 20 115 3.07e-21 95.5
Msa1048950 AT2G46590.2 42.268 97 55 1 88 184 32 127 3.88e-21 95.1
Msa1048950 AT4G21050.1 58.209 67 28 0 124 190 11 77 5.37e-21 91.7
Msa1048950 AT5G62940.1 62.295 61 22 1 128 187 63 123 3.24e-20 92.4
Msa1048950 AT4G21040.1 62.264 53 20 0 139 191 27 79 2.43e-18 84.3
Msa1048950 AT4G21080.1 60.377 53 21 0 139 191 27 79 1.31e-17 82.8
Msa1048950 AT4G21030.1 59.091 44 18 0 139 182 23 66 1.54e-11 63.9

Find 133 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTAGTTGAAACTTTA+TGG 0.068102 7_2:+11597343 Msa1048950:three_prime_UTR
CATTCTATCCTGCAACTTAT+TGG 0.150210 7_2:+11596486 Msa1048950:CDS
CTAATCTGGCTTGGTTTATT+AGG 0.170341 7_2:+11597315 Msa1048950:three_prime_UTR
CCAACATGAATTTCTGAAAT+AGG 0.172204 7_2:-11594224 None:intergenic
TCGTAACCACTTATATATTT+TGG 0.176022 7_2:+11596914 Msa1048950:exon
ATTCTATCCTGCAACTTATT+GGG 0.232977 7_2:+11596487 Msa1048950:CDS
CTGAACAAGAACCACATTAA+TGG 0.264740 7_2:+11597110 Msa1048950:three_prime_UTR
GGGTTCAATTTGTACTTTCC+TGG 0.266809 7_2:+11597252 Msa1048950:three_prime_UTR
TCCTCCGAGAAGACTCTTTC+AGG 0.298613 7_2:+11596787 Msa1048950:CDS
GCAAGAACTGCCAGAGATAT+TGG 0.302290 7_2:+11595973 Msa1048950:CDS
AAAAGAATGATGTTGTAAAA+AGG 0.349191 7_2:-11594099 None:intergenic
GAGAGTTTGTAGTAGAGTTA+TGG 0.354581 7_2:-11596577 None:intergenic
GACTCTGCGATCAAACTGTT+TGG 0.377035 7_2:+11594191 Msa1048950:CDS
CAATGTAGCAACCTCCCTTT+CGG 0.382427 7_2:-11595790 None:intergenic
GCCAACCGAACAGAAGAAAA+AGG 0.384313 7_2:+11597060 Msa1048950:three_prime_UTR
ATCCTCCCCTTGTTCTTCAC+TGG 0.395303 7_2:-11596252 None:intergenic
GTGCAAAATTACACAAGAAA+TGG 0.400392 7_2:+11596188 Msa1048950:CDS
TGCACCTTCCGTCGACTTTG+TGG 0.406190 7_2:-11596300 None:intergenic
CCTTGTTCTTCACTGGTATG+AGG 0.408705 7_2:-11596245 None:intergenic
TATATACATCTAAGAGGTCT+TGG 0.409722 7_2:-11597205 None:intergenic
AGCTCTTTCTGGACAACACT+TGG 0.410378 7_2:+11596737 Msa1048950:CDS
CTCCCTTGAATGTTTACCTA+AGG 0.416607 7_2:-11596603 None:intergenic
CTTGAATGTTTACCTAAGGT+TGG 0.421534 7_2:-11596599 None:intergenic
AACGGTACAATCCTTACATT+TGG 0.421611 7_2:+11596107 Msa1048950:CDS
TTATATATACATGAACTAAC+AGG 0.424598 7_2:-11597145 None:intergenic
TCAGTTCTAGAAGTTGCATC+TGG 0.425578 7_2:-11595744 None:intergenic
CAACCTTAGGTAAACATTCA+AGG 0.427611 7_2:+11596600 Msa1048950:CDS
TCATTGATTCTAATCTGGCT+TGG 0.431622 7_2:+11597306 Msa1048950:three_prime_UTR
AAGCGACACTTCAGAATTCT+CGG 0.433945 7_2:+11596063 Msa1048950:CDS
TTCAAAGACCGAAGAAGAAC+AGG 0.434370 7_2:+11595818 Msa1048950:CDS
TGTCTCGTCCTGTTCTTCTT+CGG 0.435826 7_2:-11595826 None:intergenic
GTACAACCCCAATAAGTTGC+AGG 0.438881 7_2:-11596494 None:intergenic
TCATGAATCCAGAACACAAC+GGG 0.441078 7_2:+11595654 Msa1048950:intron
CCTAGACAATGCCGCCGGAT+TGG 0.441868 7_2:-11596870 None:intergenic
GAGTTATGGTTTGCACCATT+CGG 0.443392 7_2:-11596563 None:intergenic
TTTCTGCGACCGGCACCTAC+TGG 0.444047 7_2:-11596023 None:intergenic
TTGGTTGTGTCAAACTGATT+TGG 0.446723 7_2:+11596948 Msa1048950:three_prime_UTR
CACCTTGTGGTGGGAAGCTA+TGG 0.449902 7_2:-11596361 None:intergenic
TTCAGTCTTGCAAGCCAATC+CGG 0.451150 7_2:+11596856 Msa1048950:CDS
TGTGGTTTCCTAAAACTTTG+AGG 0.455041 7_2:+11596687 Msa1048950:CDS
TTAGCGAAGAAAAGAGTTTG+TGG 0.459216 7_2:+11596669 Msa1048950:CDS
TTCTATCCTGCAACTTATTG+GGG 0.466905 7_2:+11596488 Msa1048950:CDS
TTTAGTTGAAACTTTATGGC+TGG 0.467066 7_2:+11597347 Msa1048950:three_prime_UTR
CACCGGCAGTCCAATATCTC+TGG 0.470878 7_2:-11595983 None:intergenic
AATGCCTGAAAGAGTCTTCT+CGG 0.474960 7_2:-11596791 None:intergenic
CTCGTTTGCATCGGATTCCA+TGG 0.476868 7_2:-11596416 None:intergenic
GCAGTTCTTGCAGAAATGAC+GGG 0.478653 7_2:-11595961 None:intergenic
GATTGTACCGTTGCATTTCA+AGG 0.479174 7_2:-11596096 None:intergenic
CAATAAGTTGCAGGATAGAA+TGG 0.479650 7_2:-11596485 None:intergenic
GGAAAATCCTGATGGACAAA+AGG 0.486001 7_2:-11596459 None:intergenic
GATGGACAAAAGGCCGGTGG+TGG 0.498700 7_2:-11596449 None:intergenic
ACTTTCCTCATGGAACTCCT+TGG 0.498742 7_2:+11596387 Msa1048950:CDS
ACTACAAACTCTCCAACCTT+AGG 0.501563 7_2:+11596587 Msa1048950:CDS
TAATGTGGTTCTTGTTCAGT+TGG 0.504875 7_2:-11597106 None:intergenic
GGCAGTTCTTGCAGAAATGA+CGG 0.505612 7_2:-11595962 None:intergenic
AATGATAAGAATAAGAATGA+GGG 0.510840 7_2:+11597231 Msa1048950:three_prime_UTR
ATTATTTATATACATCTAAG+AGG 0.515093 7_2:-11597211 None:intergenic
ATCAGTGAGCTCGTTTGCAT+CGG 0.516857 7_2:-11596425 None:intergenic
CGTGGAATGTTCCATGCACT+TGG 0.517020 7_2:-11596521 None:intergenic
CCTATTTCAGAAATTCATGT+TGG 0.517045 7_2:+11594224 Msa1048950:CDS
GTGAGTTGGATCCAAATGTA+AGG 0.517691 7_2:-11596118 None:intergenic
AGCTTGTTCTTGAGATACAT+TGG 0.519714 7_2:-11596327 None:intergenic
TTGTCCTCGTTGTAGTAGCA+TGG 0.523986 7_2:+11595896 Msa1048950:CDS
TGCCAGAGATATTGGACTGC+CGG 0.524544 7_2:+11595981 Msa1048950:CDS
ACCTACTGGTACGTTTCTCA+TGG 0.524953 7_2:-11596009 None:intergenic
TACCGTTGCATTTCAAGGAA+GGG 0.526711 7_2:-11596091 None:intergenic
TACGTTTCTCATGGTTCCAC+CGG 0.531107 7_2:-11596000 None:intergenic
TGAATCACATAAAGGTGAGT+TGG 0.531921 7_2:-11596132 None:intergenic
GATGCCACTGAATCACATAA+AGG 0.533836 7_2:-11596140 None:intergenic
GTACCGTTGCATTTCAAGGA+AGG 0.535966 7_2:-11596092 None:intergenic
TCTTGCAGAAATGACGGGGT+TGG 0.542522 7_2:-11595956 None:intergenic
GCTCTTTCTGGACAACACTT+GGG 0.545826 7_2:+11596738 Msa1048950:CDS
CAATTACCAAAATATATAAG+TGG 0.552215 7_2:-11596920 None:intergenic
TAATGATAAGAATAAGAATG+AGG 0.552697 7_2:+11597230 Msa1048950:three_prime_UTR
TTTGCACCATTCGGTGATGA+TGG 0.554189 7_2:-11596554 None:intergenic
CAAGGTGGCTACTTTCCTCA+TGG 0.567490 7_2:+11596377 Msa1048950:CDS
CACCCTTCCTTGAAATGCAA+CGG 0.569292 7_2:+11596089 Msa1048950:CDS
TTGTTCTTGAGATACATTGG+TGG 0.575585 7_2:-11596324 None:intergenic
GAACTCCTTGGCATTTACCA+TGG 0.576696 7_2:+11596399 Msa1048950:CDS
CAAGAACAAGCTATGTGGAA+TGG 0.577149 7_2:+11596338 Msa1048950:CDS
AACCTTAGGTAAACATTCAA+GGG 0.580141 7_2:+11596601 Msa1048950:CDS
CTCACCTTTATGTGATTCAG+TGG 0.580504 7_2:+11596136 Msa1048950:CDS
ATTCTTCTGTTGATTGTGCA+AGG 0.584727 7_2:-11595713 None:intergenic
AATGGCATGGAAAATCCTGA+TGG 0.590674 7_2:-11596467 None:intergenic
TATCTCAAGAACAAGCTATG+TGG 0.592377 7_2:+11596333 Msa1048950:CDS
TGTTACAGTATCCACCGAAA+GGG 0.593158 7_2:+11595776 Msa1048950:CDS
CAAGTGCATGGAACATTCCA+CGG 0.594597 7_2:+11596522 Msa1048950:CDS
CCTCATACCAGTGAAGAACA+AGG 0.595660 7_2:+11596245 Msa1048950:CDS
GGCCATAGCTTCCCACCACA+AGG 0.598341 7_2:+11596359 Msa1048950:CDS
CATTATGAAAGAAAGAAGCC+AGG 0.602999 7_2:-11597270 None:intergenic
AATCCTGATGGACAAAAGGC+CGG 0.603585 7_2:-11596455 None:intergenic
GGAAAGTAGCCACCTTGTGG+TGG 0.603675 7_2:-11596371 None:intergenic
GGATCAATCAAATAAATCGT+CGG 0.604223 7_2:+11596271 Msa1048950:CDS
ACCTTCCGTCGACTTTGTGG+AGG 0.610776 7_2:-11596297 None:intergenic
GGATTCCATGGTAAATGCCA+AGG 0.611774 7_2:-11596404 None:intergenic
CTGTTACAGTATCCACCGAA+AGG 0.612746 7_2:+11595775 Msa1048950:CDS
CTAAAATCAAGCGAAGGAGA+TGG 0.613491 7_2:+11596635 Msa1048950:CDS
TGTAGCAACCTCCCTTTCGG+TGG 0.614289 7_2:-11595787 None:intergenic
GAAAGTAGCCACCTTGTGGT+GGG 0.619044 7_2:-11596370 None:intergenic
TCTTGTGAAAAGGTTGAACA+CGG 0.621914 7_2:-11596971 None:intergenic
GATGATGGTTGTGCTTGCCG+TGG 0.621977 7_2:-11596539 None:intergenic
ATGATAAGAATAAGAATGAG+GGG 0.622016 7_2:+11597232 Msa1048950:three_prime_UTR
TTTGAGGATTGATGACTCTG+AGG 0.623626 7_2:+11596703 Msa1048950:CDS
ATGCTACTACAACGAGGACA+AGG 0.624918 7_2:-11595894 None:intergenic
AGTTGCAGGATAGAATGGCA+TGG 0.625575 7_2:-11596480 None:intergenic
GAGCTCACTGATTCCACCAC+CGG 0.627819 7_2:+11596436 Msa1048950:CDS
CAGTTCTTGCAGAAATGACG+GGG 0.628674 7_2:-11595960 None:intergenic
GTTGTACTATGCCAAGTGCA+TGG 0.629999 7_2:+11596510 Msa1048950:CDS
ACAAGAATGCTCCATTAATG+TGG 0.631067 7_2:-11597121 None:intergenic
TACCAGTGAAGAACAAGGGG+AGG 0.634191 7_2:+11596250 Msa1048950:CDS
TACAGTATCCACCGAAAGGG+AGG 0.634842 7_2:+11595779 Msa1048950:CDS
ACCTCCACAAAGTCGACGGA+AGG 0.636006 7_2:+11596296 Msa1048950:CDS
ACAAGAACATGAGATTGAGA+AGG 0.637128 7_2:+11594337 Msa1048950:CDS
AACATGCTAAAATCAAGCGA+AGG 0.639475 7_2:+11596629 Msa1048950:CDS
CTCATACCAGTGAAGAACAA+GGG 0.644364 7_2:+11596246 Msa1048950:CDS
TCATACCAGTGAAGAACAAG+GGG 0.646136 7_2:+11596247 Msa1048950:CDS
TGAGGAAAGTAGCCACCTTG+TGG 0.648868 7_2:-11596374 None:intergenic
AGAAACGTACCAGTAGGTGC+CGG 0.653444 7_2:+11596014 Msa1048950:CDS
CAGAGATATTGGACTGCCGG+TGG 0.661022 7_2:+11595984 Msa1048950:CDS
CTTAGGTAAACATTCAAGGG+AGG 0.664142 7_2:+11596604 Msa1048950:CDS
GGTTACCTCCACAAAGTCGA+CGG 0.667234 7_2:+11596292 Msa1048950:CDS
GCACAACCATCATCACCGAA+TGG 0.672816 7_2:+11596548 Msa1048950:CDS
ACTACAAATTAACAAGACTG+CGG 0.695212 7_2:-11597023 None:intergenic
ACCATGAGAAACGTACCAGT+AGG 0.705884 7_2:+11596008 Msa1048950:CDS
CCTGATGGACAAAAGGCCGG+TGG 0.706000 7_2:-11596452 None:intergenic
TCTTCTCGGAGGAACTGAGT+CGG 0.710902 7_2:-11596777 None:intergenic
GGACGAGACAAGTAACACAC+AGG 0.712817 7_2:+11595839 Msa1048950:CDS
CATAGCTTCCCACCACAAGG+TGG 0.714183 7_2:+11596362 Msa1048950:CDS
AGTCTTGCAAGCCAATCCGG+CGG 0.717524 7_2:+11596859 Msa1048950:CDS
GCCTGAAAGAGTCTTCTCGG+AGG 0.722364 7_2:-11596788 None:intergenic
AAATGCCAAGGAGTTCCATG+AGG 0.739950 7_2:-11596392 None:intergenic
TTCATGAATCCAGAACACAA+CGG 0.740548 7_2:+11595653 Msa1048950:intron
GTGTCCATGCTACTACAACG+AGG 0.808267 7_2:-11595900 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGAGAATTTTGATTTTT+TGG + chr7_2:11594367-11594386 Msa1048950:intron 15.0%
!!! ATTTTTCCATTTCAAATAAA+GGG - chr7_2:11594420-11594439 None:intergenic 15.0%
!!! TATTTTTCCATTTCAAATAA+AGG - chr7_2:11594421-11594440 None:intergenic 15.0%
!! TGAAATGGAAAAATATTTAA+TGG + chr7_2:11594426-11594445 Msa1048950:intron 15.0%
!! GAAATGGAAAAATATTTAAT+GGG + chr7_2:11594427-11594446 Msa1048950:intron 15.0%
!!! AATAATTTTTTCACTTTTCA+AGG + chr7_2:11594574-11594593 Msa1048950:intron 15.0%
!! TTAAACTACATAGTATAATT+TGG - chr7_2:11594668-11594687 None:intergenic 15.0%
!!! TAAGTTTTTGAAGTTATATT+TGG + chr7_2:11594685-11594704 Msa1048950:intron 15.0%
!! TTTATTTCATATACCAAATA+AGG - chr7_2:11594751-11594770 None:intergenic 15.0%
!!! TTCTTTTTATGATATTAATG+TGG + chr7_2:11595583-11595602 Msa1048950:intron 15.0%
!! ATTATTTATATACATCTAAG+AGG - chr7_2:11597214-11597233 None:intergenic 15.0%
!! ATTATTTAGTTGAAACTTTA+TGG + chr7_2:11597343-11597362 Msa1048950:three_prime_UTR 15.0%
!! AAAAGAATGATGTTGTAAAA+AGG - chr7_2:11594102-11594121 None:intergenic 20.0%
!! ATTGAAAGAATTACCTTATT+TGG + chr7_2:11594735-11594754 Msa1048950:intron 20.0%
!!! AAATCATGTTAGTTTATGTT+CGG - chr7_2:11595031-11595050 None:intergenic 20.0%
!! TTTATTGCGAAAAAAACATT+TGG - chr7_2:11595449-11595468 None:intergenic 20.0%
!! CATGAATAAATACTAATCTT+TGG + chr7_2:11595628-11595647 Msa1048950:intron 20.0%
!! CAATTACCAAAATATATAAG+TGG - chr7_2:11596923-11596942 None:intergenic 20.0%
!!! TATTTTGGTAATTGTGTTTT+TGG + chr7_2:11596929-11596948 Msa1048950:three_prime_UTR 20.0%
!! TTATATATACATGAACTAAC+AGG - chr7_2:11597148-11597167 None:intergenic 20.0%
!! TAATGATAAGAATAAGAATG+AGG + chr7_2:11597230-11597249 Msa1048950:three_prime_UTR 20.0%
!! AATGATAAGAATAAGAATGA+GGG + chr7_2:11597231-11597250 Msa1048950:three_prime_UTR 20.0%
!!! GTTTTTAGCAACAAAAATGT+TGG + chr7_2:11594160-11594179 Msa1048950:exon 25.0%
!! TTATGACCCTTTATTTGAAA+TGG + chr7_2:11594411-11594430 Msa1048950:intron 25.0%
!!! AAAATTCATTTGACTTGCTT+TGG + chr7_2:11594475-11594494 Msa1048950:intron 25.0%
!! TTTTGGATTGTTTTCAATCT+AGG + chr7_2:11594612-11594631 Msa1048950:intron 25.0%
!! TTTGAAGTTATATTTGGCTT+TGG + chr7_2:11594691-11594710 Msa1048950:intron 25.0%
!!! GGTGAAGTTTTATTTTTTCA+TGG + chr7_2:11594712-11594731 Msa1048950:intron 25.0%
!!! CTTTTTCTTGTTTGACTTTT+GGG + chr7_2:11595063-11595082 Msa1048950:intron 25.0%
!!! TTTGACTTTTGGGTTTTATA+TGG + chr7_2:11595073-11595092 Msa1048950:intron 25.0%
!!! TTTAAAATTCGACAGTTTTC+TGG - chr7_2:11595111-11595130 None:intergenic 25.0%
!!! AACTGTCGAATTTTAAAAAC+TGG + chr7_2:11595114-11595133 Msa1048950:intron 25.0%
!! TCGTAACCACTTATATATTT+TGG + chr7_2:11596914-11596933 Msa1048950:exon 25.0%
!! TTTGTGATTTTCTTGTGAAA+AGG - chr7_2:11596984-11597003 None:intergenic 25.0%
! ATGATAAGAATAAGAATGAG+GGG + chr7_2:11597232-11597251 Msa1048950:three_prime_UTR 25.0%
!!! GTTTTTCATTGATTCTAATC+TGG + chr7_2:11597301-11597320 Msa1048950:three_prime_UTR 25.0%
!! CCAACATGAATTTCTGAAAT+AGG - chr7_2:11594227-11594246 None:intergenic 30.0%
CCTATTTCAGAAATTCATGT+TGG + chr7_2:11594224-11594243 Msa1048950:CDS 30.0%
!! GGAGTTTCAATGTTTGATTT+TGG + chr7_2:11594595-11594614 Msa1048950:intron 30.0%
! GAAGCTATTGAAAGTGATTT+TGG + chr7_2:11594912-11594931 Msa1048950:intron 30.0%
TTAGTTTATGTTCGGAATCA+AGG - chr7_2:11595023-11595042 None:intergenic 30.0%
!! GCTTTTTCTTGTTTGACTTT+TGG + chr7_2:11595062-11595081 Msa1048950:intron 30.0%
AAAACTGAAATTCGTCAAAG+TGG - chr7_2:11595193-11595212 None:intergenic 30.0%
CACAAACTGATACAAAAACA+AGG + chr7_2:11595317-11595336 Msa1048950:intron 30.0%
TCGAATAAAAAGAACGAAGA+TGG + chr7_2:11595687-11595706 Msa1048950:CDS 30.0%
GTGCAAAATTACACAAGAAA+TGG + chr7_2:11596188-11596207 Msa1048950:CDS 30.0%
GGATCAATCAAATAAATCGT+CGG + chr7_2:11596271-11596290 Msa1048950:CDS 30.0%
ATTCTATCCTGCAACTTATT+GGG + chr7_2:11596487-11596506 Msa1048950:CDS 30.0%
AACCTTAGGTAAACATTCAA+GGG + chr7_2:11596601-11596620 Msa1048950:CDS 30.0%
! TCATCAATCCTCAAAGTTTT+AGG - chr7_2:11596698-11596717 None:intergenic 30.0%
ACTACAAATTAACAAGACTG+CGG - chr7_2:11597026-11597045 None:intergenic 30.0%
TATATACATCTAAGAGGTCT+TGG - chr7_2:11597208-11597227 None:intergenic 30.0%
TTTAGTTGAAACTTTATGGC+TGG + chr7_2:11597347-11597366 Msa1048950:three_prime_UTR 30.0%
ACAAGAACATGAGATTGAGA+AGG + chr7_2:11594337-11594356 Msa1048950:CDS 35.0%
ACCTTGTTGATGCTAGAATT+AGG + chr7_2:11594890-11594909 Msa1048950:intron 35.0%
TCCTAATTCTAGCATCAACA+AGG - chr7_2:11594894-11594913 None:intergenic 35.0%
AGGTGAATTTCACGAAATCA+TGG - chr7_2:11595003-11595022 None:intergenic 35.0%
! ATTCGACAGTTTTCTGGATT+TGG - chr7_2:11595105-11595124 None:intergenic 35.0%
! TCAGTTTTACTCAATTCCCT+TGG + chr7_2:11595205-11595224 Msa1048950:intron 35.0%
AATTCCCTTGGTTTAATGTC+TGG + chr7_2:11595217-11595236 Msa1048950:intron 35.0%
AACACCAGACATTAAACCAA+GGG - chr7_2:11595224-11595243 None:intergenic 35.0%
AAACACCAGACATTAAACCA+AGG - chr7_2:11595225-11595244 None:intergenic 35.0%
TTAATGTCTGGTGTTTGTGT+CGG + chr7_2:11595229-11595248 Msa1048950:intron 35.0%
TCGAATGATAGGATCCAATT+TGG - chr7_2:11595278-11595297 None:intergenic 35.0%
GTTAGGAAACATCGAATGAT+AGG - chr7_2:11595289-11595308 None:intergenic 35.0%
CAGTTTGTGTAGAATCTGTT+AGG - chr7_2:11595306-11595325 None:intergenic 35.0%
CATTAGCAGTAGACTCAATA+TGG - chr7_2:11595359-11595378 None:intergenic 35.0%
TTCATGAATCCAGAACACAA+CGG + chr7_2:11595653-11595672 Msa1048950:intron 35.0%
! ATTCTTCTGTTGATTGTGCA+AGG - chr7_2:11595716-11595735 None:intergenic 35.0%
! CTATTTTGTCCGGTTTTTTG+AGG - chr7_2:11595872-11595891 None:intergenic 35.0%
AACGGTACAATCCTTACATT+TGG + chr7_2:11596107-11596126 Msa1048950:CDS 35.0%
TGAATCACATAAAGGTGAGT+TGG - chr7_2:11596135-11596154 None:intergenic 35.0%
TTGTTCTTGAGATACATTGG+TGG - chr7_2:11596327-11596346 None:intergenic 35.0%
! AGCTTGTTCTTGAGATACAT+TGG - chr7_2:11596330-11596349 None:intergenic 35.0%
TATCTCAAGAACAAGCTATG+TGG + chr7_2:11596333-11596352 Msa1048950:CDS 35.0%
CAATAAGTTGCAGGATAGAA+TGG - chr7_2:11596488-11596507 None:intergenic 35.0%
CATTCTATCCTGCAACTTAT+TGG + chr7_2:11596486-11596505 Msa1048950:CDS 35.0%
TTCTATCCTGCAACTTATTG+GGG + chr7_2:11596488-11596507 Msa1048950:CDS 35.0%
GAGAGTTTGTAGTAGAGTTA+TGG - chr7_2:11596580-11596599 None:intergenic 35.0%
CTTGAATGTTTACCTAAGGT+TGG - chr7_2:11596602-11596621 None:intergenic 35.0%
CAACCTTAGGTAAACATTCA+AGG + chr7_2:11596600-11596619 Msa1048950:CDS 35.0%
AACATGCTAAAATCAAGCGA+AGG + chr7_2:11596629-11596648 Msa1048950:CDS 35.0%
TTAGCGAAGAAAAGAGTTTG+TGG + chr7_2:11596669-11596688 Msa1048950:CDS 35.0%
TGTGGTTTCCTAAAACTTTG+AGG + chr7_2:11596687-11596706 Msa1048950:CDS 35.0%
AAGCAGAAAAAAGCTCTTTC+TGG + chr7_2:11596726-11596745 Msa1048950:CDS 35.0%
! TTTTCTCGTCACACTTTGAA+GGG - chr7_2:11596817-11596836 None:intergenic 35.0%
! TTTTTCTCGTCACACTTTGA+AGG - chr7_2:11596818-11596837 None:intergenic 35.0%
TTGGTTGTGTCAAACTGATT+TGG + chr7_2:11596948-11596967 Msa1048950:three_prime_UTR 35.0%
TCTTGTGAAAAGGTTGAACA+CGG - chr7_2:11596974-11596993 None:intergenic 35.0%
! ACCAACCTTTTTCTTCTGTT+CGG - chr7_2:11597068-11597087 None:intergenic 35.0%
TAATGTGGTTCTTGTTCAGT+TGG - chr7_2:11597109-11597128 None:intergenic 35.0%
CTGAACAAGAACCACATTAA+TGG + chr7_2:11597110-11597129 Msa1048950:three_prime_UTR 35.0%
ACAAGAATGCTCCATTAATG+TGG - chr7_2:11597124-11597143 None:intergenic 35.0%
CATTATGAAAGAAAGAAGCC+AGG - chr7_2:11597273-11597292 None:intergenic 35.0%
!! TCATTGATTCTAATCTGGCT+TGG + chr7_2:11597306-11597325 Msa1048950:three_prime_UTR 35.0%
!! CTAATCTGGCTTGGTTTATT+AGG + chr7_2:11597315-11597334 Msa1048950:three_prime_UTR 35.0%
GAACTGAGAGTTACAAGAGT+TGG - chr7_2:11594860-11594879 None:intergenic 40.0%
ACTCTTGTAACTCTCAGTTC+AGG + chr7_2:11594860-11594879 Msa1048950:intron 40.0%
TAGTAAAAGCCACACTTTCG+AGG + chr7_2:11594958-11594977 Msa1048950:intron 40.0%
TTTGTTGAACCTCGAAAGTG+TGG - chr7_2:11594970-11594989 None:intergenic 40.0%
GGAATCTGCTCAAAGATGTT+AGG - chr7_2:11595140-11595159 None:intergenic 40.0%
GGGGATTAACTCATCCAAAT+TGG + chr7_2:11595261-11595280 Msa1048950:intron 40.0%
TCATGAATCCAGAACACAAC+GGG + chr7_2:11595654-11595673 Msa1048950:intron 40.0%
!! TCAGTTCTAGAAGTTGCATC+TGG - chr7_2:11595747-11595766 None:intergenic 40.0%
TGTTACAGTATCCACCGAAA+GGG + chr7_2:11595776-11595795 Msa1048950:CDS 40.0%
TTCAAAGACCGAAGAAGAAC+AGG + chr7_2:11595818-11595837 Msa1048950:CDS 40.0%
GGATAAGCACCTCAAAAAAC+CGG + chr7_2:11595860-11595879 Msa1048950:CDS 40.0%
! GGACAAGGAACTATTTTGTC+CGG - chr7_2:11595882-11595901 None:intergenic 40.0%
AAGCGACACTTCAGAATTCT+CGG + chr7_2:11596063-11596082 Msa1048950:CDS 40.0%
TACCGTTGCATTTCAAGGAA+GGG - chr7_2:11596094-11596113 None:intergenic 40.0%
GATTGTACCGTTGCATTTCA+AGG - chr7_2:11596099-11596118 None:intergenic 40.0%
! GTGAGTTGGATCCAAATGTA+AGG - chr7_2:11596121-11596140 None:intergenic 40.0%
CTCACCTTTATGTGATTCAG+TGG + chr7_2:11596136-11596155 Msa1048950:CDS 40.0%
GATGCCACTGAATCACATAA+AGG - chr7_2:11596143-11596162 None:intergenic 40.0%
CTCATACCAGTGAAGAACAA+GGG + chr7_2:11596246-11596265 Msa1048950:CDS 40.0%
TCATACCAGTGAAGAACAAG+GGG + chr7_2:11596247-11596266 Msa1048950:CDS 40.0%
CAAGAACAAGCTATGTGGAA+TGG + chr7_2:11596338-11596357 Msa1048950:CDS 40.0%
! GGAAAATCCTGATGGACAAA+AGG - chr7_2:11596462-11596481 None:intergenic 40.0%
AATGGCATGGAAAATCCTGA+TGG - chr7_2:11596470-11596489 None:intergenic 40.0%
! GAGTTATGGTTTGCACCATT+CGG - chr7_2:11596566-11596585 None:intergenic 40.0%
ACTACAAACTCTCCAACCTT+AGG + chr7_2:11596587-11596606 Msa1048950:CDS 40.0%
CTCCCTTGAATGTTTACCTA+AGG - chr7_2:11596606-11596625 None:intergenic 40.0%
CTTAGGTAAACATTCAAGGG+AGG + chr7_2:11596604-11596623 Msa1048950:CDS 40.0%
CTAAAATCAAGCGAAGGAGA+TGG + chr7_2:11596635-11596654 Msa1048950:CDS 40.0%
! TTTGAGGATTGATGACTCTG+AGG + chr7_2:11596703-11596722 Msa1048950:CDS 40.0%
AATGCCTGAAAGAGTCTTCT+CGG - chr7_2:11596794-11596813 None:intergenic 40.0%
GTGTGACGAGAAAAATCACT+CGG + chr7_2:11596823-11596842 Msa1048950:CDS 40.0%
! ACCTTTTTCTTCTGTTCGGT+TGG - chr7_2:11597064-11597083 None:intergenic 40.0%
ACCGAACAGAAGAAAAAGGT+TGG + chr7_2:11597064-11597083 Msa1048950:three_prime_UTR 40.0%
GGGTTCAATTTGTACTTTCC+TGG + chr7_2:11597252-11597271 Msa1048950:three_prime_UTR 40.0%
GACTCTGCGATCAAACTGTT+TGG + chr7_2:11594191-11594210 Msa1048950:CDS 45.0%
AAGAGCAGAGCATATGATGC+AGG - chr7_2:11595161-11595180 None:intergenic 45.0%
! TGTTTGTGTCGGTGCTTCAT+AGG + chr7_2:11595240-11595259 Msa1048950:intron 45.0%
! GTTTGTGTCGGTGCTTCATA+GGG + chr7_2:11595241-11595260 Msa1048950:intron 45.0%
! TTTGTGTCGGTGCTTCATAG+GGG + chr7_2:11595242-11595261 Msa1048950:intron 45.0%
GTCTACTGCTAATGCTCTCA+TGG + chr7_2:11595365-11595384 Msa1048950:intron 45.0%
! GTTTTTCTCCCGTTGTGTTC+TGG - chr7_2:11595665-11595684 None:intergenic 45.0%
CTGTTACAGTATCCACCGAA+AGG + chr7_2:11595775-11595794 Msa1048950:CDS 45.0%
CAATGTAGCAACCTCCCTTT+CGG - chr7_2:11595793-11595812 None:intergenic 45.0%
TGTCTCGTCCTGTTCTTCTT+CGG - chr7_2:11595829-11595848 None:intergenic 45.0%
ATGCTACTACAACGAGGACA+AGG - chr7_2:11595897-11595916 None:intergenic 45.0%
TTGTCCTCGTTGTAGTAGCA+TGG + chr7_2:11595896-11595915 Msa1048950:CDS 45.0%
CAGTTCTTGCAGAAATGACG+GGG - chr7_2:11595963-11595982 None:intergenic 45.0%
GCAGTTCTTGCAGAAATGAC+GGG - chr7_2:11595964-11595983 None:intergenic 45.0%
GGCAGTTCTTGCAGAAATGA+CGG - chr7_2:11595965-11595984 None:intergenic 45.0%
GCAAGAACTGCCAGAGATAT+TGG + chr7_2:11595973-11595992 Msa1048950:CDS 45.0%
TACGTTTCTCATGGTTCCAC+CGG - chr7_2:11596003-11596022 None:intergenic 45.0%
ACCATGAGAAACGTACCAGT+AGG + chr7_2:11596008-11596027 Msa1048950:CDS 45.0%
ACCTACTGGTACGTTTCTCA+TGG - chr7_2:11596012-11596031 None:intergenic 45.0%
!!! GCTCTTGTTTTTTCTGCGAC+CGG - chr7_2:11596036-11596055 None:intergenic 45.0%
CACCCTTCCTTGAAATGCAA+CGG + chr7_2:11596089-11596108 Msa1048950:CDS 45.0%
GTACCGTTGCATTTCAAGGA+AGG - chr7_2:11596095-11596114 None:intergenic 45.0%
CCTTGTTCTTCACTGGTATG+AGG - chr7_2:11596248-11596267 None:intergenic 45.0%
CCTCATACCAGTGAAGAACA+AGG + chr7_2:11596245-11596264 Msa1048950:CDS 45.0%
ACTTTCCTCATGGAACTCCT+TGG + chr7_2:11596387-11596406 Msa1048950:CDS 45.0%
AAATGCCAAGGAGTTCCATG+AGG - chr7_2:11596395-11596414 None:intergenic 45.0%
GAACTCCTTGGCATTTACCA+TGG + chr7_2:11596399-11596418 Msa1048950:CDS 45.0%
GGATTCCATGGTAAATGCCA+AGG - chr7_2:11596407-11596426 None:intergenic 45.0%
ATCAGTGAGCTCGTTTGCAT+CGG - chr7_2:11596428-11596447 None:intergenic 45.0%
! AATCCTGATGGACAAAAGGC+CGG - chr7_2:11596458-11596477 None:intergenic 45.0%
AGTTGCAGGATAGAATGGCA+TGG - chr7_2:11596483-11596502 None:intergenic 45.0%
GTACAACCCCAATAAGTTGC+AGG - chr7_2:11596497-11596516 None:intergenic 45.0%
GTTGTACTATGCCAAGTGCA+TGG + chr7_2:11596510-11596529 Msa1048950:CDS 45.0%
CAAGTGCATGGAACATTCCA+CGG + chr7_2:11596522-11596541 Msa1048950:CDS 45.0%
! TTTGCACCATTCGGTGATGA+TGG - chr7_2:11596557-11596576 None:intergenic 45.0%
AGCTCTTTCTGGACAACACT+TGG + chr7_2:11596737-11596756 Msa1048950:CDS 45.0%
GCTCTTTCTGGACAACACTT+GGG + chr7_2:11596738-11596757 Msa1048950:CDS 45.0%
TTCAGTCTTGCAAGCCAATC+CGG + chr7_2:11596856-11596875 Msa1048950:CDS 45.0%
GCCAACCGAACAGAAGAAAA+AGG + chr7_2:11597060-11597079 Msa1048950:three_prime_UTR 45.0%
TACAGTATCCACCGAAAGGG+AGG + chr7_2:11595779-11595798 Msa1048950:CDS 50.0%
GGACGAGACAAGTAACACAC+AGG + chr7_2:11595839-11595858 Msa1048950:CDS 50.0%
GTGTCCATGCTACTACAACG+AGG - chr7_2:11595903-11595922 None:intergenic 50.0%
! TCTTGCAGAAATGACGGGGT+TGG - chr7_2:11595959-11595978 None:intergenic 50.0%
TGCCAGAGATATTGGACTGC+CGG + chr7_2:11595981-11596000 Msa1048950:CDS 50.0%
AGAAACGTACCAGTAGGTGC+CGG + chr7_2:11596014-11596033 Msa1048950:CDS 50.0%
TACCAGTGAAGAACAAGGGG+AGG + chr7_2:11596250-11596269 Msa1048950:CDS 50.0%
ATCCTCCCCTTGTTCTTCAC+TGG - chr7_2:11596255-11596274 None:intergenic 50.0%
GGTTACCTCCACAAAGTCGA+CGG + chr7_2:11596292-11596311 Msa1048950:CDS 50.0%
GAAAGTAGCCACCTTGTGGT+GGG - chr7_2:11596373-11596392 None:intergenic 50.0%
TGAGGAAAGTAGCCACCTTG+TGG - chr7_2:11596377-11596396 None:intergenic 50.0%
! CAAGGTGGCTACTTTCCTCA+TGG + chr7_2:11596377-11596396 Msa1048950:CDS 50.0%
CTCGTTTGCATCGGATTCCA+TGG - chr7_2:11596419-11596438 None:intergenic 50.0%
CGTGGAATGTTCCATGCACT+TGG - chr7_2:11596524-11596543 None:intergenic 50.0%
GCACAACCATCATCACCGAA+TGG + chr7_2:11596548-11596567 Msa1048950:CDS 50.0%
TCTTCTCGGAGGAACTGAGT+CGG - chr7_2:11596780-11596799 None:intergenic 50.0%
TCCTCCGAGAAGACTCTTTC+AGG + chr7_2:11596787-11596806 Msa1048950:CDS 50.0%
TGTAGCAACCTCCCTTTCGG+TGG - chr7_2:11595790-11595809 None:intergenic 55.0%
CACCGGCAGTCCAATATCTC+TGG - chr7_2:11595986-11596005 None:intergenic 55.0%
CAGAGATATTGGACTGCCGG+TGG + chr7_2:11595984-11596003 Msa1048950:CDS 55.0%
ACCTCCACAAAGTCGACGGA+AGG + chr7_2:11596296-11596315 Msa1048950:CDS 55.0%
!! ACCTTCCGTCGACTTTGTGG+AGG - chr7_2:11596300-11596319 None:intergenic 55.0%
!! TGCACCTTCCGTCGACTTTG+TGG - chr7_2:11596303-11596322 None:intergenic 55.0%
! CACCTTGTGGTGGGAAGCTA+TGG - chr7_2:11596364-11596383 None:intergenic 55.0%
CATAGCTTCCCACCACAAGG+TGG + chr7_2:11596362-11596381 Msa1048950:CDS 55.0%
GGAAAGTAGCCACCTTGTGG+TGG - chr7_2:11596374-11596393 None:intergenic 55.0%
!! GAGCTCACTGATTCCACCAC+CGG + chr7_2:11596436-11596455 Msa1048950:CDS 55.0%
! GATGATGGTTGTGCTTGCCG+TGG - chr7_2:11596542-11596561 None:intergenic 55.0%
GCCTGAAAGAGTCTTCTCGG+AGG - chr7_2:11596791-11596810 None:intergenic 55.0%
AGTCTTGCAAGCCAATCCGG+CGG + chr7_2:11596859-11596878 Msa1048950:CDS 55.0%
TTTCTGCGACCGGCACCTAC+TGG - chr7_2:11596026-11596045 None:intergenic 60.0%
GGCCATAGCTTCCCACCACA+AGG + chr7_2:11596359-11596378 Msa1048950:CDS 60.0%
GATGGACAAAAGGCCGGTGG+TGG - chr7_2:11596452-11596471 None:intergenic 60.0%
! CCTGATGGACAAAAGGCCGG+TGG - chr7_2:11596455-11596474 None:intergenic 60.0%
! CCACCGGCCTTTTGTCCATC+AGG + chr7_2:11596452-11596471 Msa1048950:CDS 60.0%
CCTAGACAATGCCGCCGGAT+TGG - chr7_2:11596873-11596892 None:intergenic 60.0%
CCAATCCGGCGGCATTGTCT+AGG + chr7_2:11596870-11596889 Msa1048950:CDS 60.0%
AGCGACCTAGACAATGCCGC+CGG - chr7_2:11596878-11596897 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 11594075 11597402 11594075 ID=Msa1048950;Name=Msa1048950
chr7_2 mRNA 11594075 11597402 11594075 ID=Msa1048950-mRNA-1;Parent=Msa1048950;Name=Msa1048950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=101|1|1|1|1|1|2|483|478
chr7_2 exon 11594075 11594358 11594075 ID=Msa1048950-mRNA-1:exon:2921;Parent=Msa1048950-mRNA-1
chr7_2 exon 11595666 11597402 11595666 ID=Msa1048950-mRNA-1:exon:2922;Parent=Msa1048950-mRNA-1
chr7_2 five_prime_UTR 11594075 11594175 11594075 ID=Msa1048950-mRNA-1:five_prime_utr;Parent=Msa1048950-mRNA-1
chr7_2 CDS 11594176 11594358 11594176 ID=Msa1048950-mRNA-1:cds;Parent=Msa1048950-mRNA-1
chr7_2 CDS 11595666 11596919 11595666 ID=Msa1048950-mRNA-1:cds;Parent=Msa1048950-mRNA-1
chr7_2 three_prime_UTR 11596920 11597402 11596920 ID=Msa1048950-mRNA-1:three_prime_utr;Parent=Msa1048950-mRNA-1
Gene Sequence

>Msa1048950

ATGTTGGAGACAAAAGACTCTGCGATCAAACTGTTTGGAAAAACAATTCCTATTTCAGAAATTCATGTTGGAAAAACAATTTCAGAGAGTATTGATGATCATCATCATCATGATTTTTCTACAAACTCTTCAAATGAGTCTCATAATAATAAAGATGCTTCACAAGAACATGAGATTGAGAAGAACACAACGGGAGAAAAACTGTCGAATAAAAAGAACGAAGATGGATTCCTTGCACAATCAACAGAAGAATTCACTAATCCAGATGCAACTTCTAGAACTGATGAAGAATCTGTTACAGTATCCACCGAAAGGGAGGTTGCTACATTGAAAACTTCAAAGACCGAAGAAGAACAGGACGAGACAAGTAACACACAGGATAAGCACCTCAAAAAACCGGACAAAATAGTTCCTTGTCCTCGTTGTAGTAGCATGGACACGAAGTTCTGCTACTATAATAATTACAATGTCAACCAACCCCGTCATTTCTGCAAGAACTGCCAGAGATATTGGACTGCCGGTGGAACCATGAGAAACGTACCAGTAGGTGCCGGTCGCAGAAAAAACAAGAGCTCTTCAGAAGCGACACTTCAGAATTCTCGGATACACCCTTCCTTGAAATGCAACGGTACAATCCTTACATTTGGATCCAACTCACCTTTATGTGATTCAGTGGCATCTGTTTTGAAACTTGCTGATAAAACAGTGCAAAATTACACAAGAAATGGATATCATAAACATGAAGAACTAAGAATTTGTGTTCCTCATACCAGTGAAGAACAAGGGGAGGATCAATCAAATAAATCGTCGGTTACCTCCACAAAGTCGACGGAAGGTGCAACCACCAATGTATCTCAAGAACAAGCTATGTGGAATGGCCATAGCTTCCCACCACAAGGTGGCTACTTTCCTCATGGAACTCCTTGGCATTTACCATGGAATCCGATGCAAACGAGCTCACTGATTCCACCACCGGCCTTTTGTCCATCAGGATTTTCCATGCCATTCTATCCTGCAACTTATTGGGGTTGTACTATGCCAAGTGCATGGAACATTCCACGGCAAGCACAACCATCATCACCGAATGGTGCAAACCATAACTCTACTACAAACTCTCCAACCTTAGGTAAACATTCAAGGGAGGAAAACATGCTAAAATCAAGCGAAGGAGATGGTAAGAAAGAAATTAGCGAAGAAAAGAGTTTGTGGTTTCCTAAAACTTTGAGGATTGATGACTCTGAGGAAGCAGAAAAAAGCTCTTTCTGGACAACACTTGGGATTAAAAACAACAACGCCGACTCAGTTCCTCCGAGAAGACTCTTTCAGGCATTCCCTTCAAAGTGTGACGAGAAAAATCACTCGGTACAATTGTCTTCAGTCTTGCAAGCCAATCCGGCGGCATTGTCTAGGTCGCTTCACTTTCATGAGACTTCGTAA
Protein sequence

>Msa1048950

MLETKDSAIKLFGKTIPISEIHVGKTISESIDDHHHHDFSTNSSNESHNNKDASQEHEIEKNTTGEKLSNKKNEDGFLAQSTEEFTNPDATSRTDEESVTVSTEREVATLKTSKTEEEQDETSNTQDKHLKKPDKIVPCPRCSSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSEATLQNSRIHPSLKCNGTILTFGSNSPLCDSVASVLKLADKTVQNYTRNGYHKHEELRICVPHTSEEQGEDQSNKSSVTSTKSTEGATTNVSQEQAMWNGHSFPPQGGYFPHGTPWHLPWNPMQTSSLIPPPAFCPSGFSMPFYPATYWGCTMPSAWNIPRQAQPSSPNGANHNSTTNSPTLGKHSREENMLKSSEGDGKKEISEEKSLWFPKTLRIDDSEEAEKSSFWTTLGIKNNNADSVPPRRLFQAFPSKCDEKNHSVQLSSVLQANPAALSRSLHFHETS*