AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1437140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437140 MtrunA17_Chr7g0217581 89.117 487 42 3 1 477 98 583 0.0 870
Msa1437140 MtrunA17_Chr6g0453321 56.313 499 192 10 1 477 1 495 4.69e-170 488
Msa1437140 MtrunA17_Chr4g0042481 42.857 497 228 12 1 475 1 463 9.60e-112 338
Msa1437140 MtrunA17_Chr3g0092111 39.847 522 212 19 1 477 1 465 3.18e-89 280
Msa1437140 MtrunA17_Chr5g0417601 37.654 486 181 15 4 475 2 379 8.51e-70 227
Msa1437140 MtrunA17_Chr8g0355261 34.888 493 239 21 3 476 9 438 1.50e-66 220
Msa1437140 MtrunA17_Chr5g0417561 35.579 475 188 18 4 475 2 361 8.76e-66 216
Msa1437140 MtrunA17_Chr5g0417551 35.041 488 181 20 4 475 2 369 5.31e-62 206
Msa1437140 MtrunA17_Chr7g0254161 34.651 430 195 14 78 476 49 423 2.84e-50 177
Msa1437140 MtrunA17_Chr5g0417571 41.434 251 119 7 6 238 4 244 2.72e-40 147
Msa1437140 MtrunA17_Chr6g0460731 37.282 287 97 10 2 253 7 245 7.62e-40 147
Msa1437140 MtrunA17_Chr6g0460721 64.211 95 34 0 95 189 48 142 3.69e-37 139
Msa1437140 MtrunA17_Chr2g0283811 83.333 60 10 0 130 189 41 100 2.58e-33 123
Msa1437140 MtrunA17_Chr3g0127201 66.667 60 20 0 133 192 24 83 8.94e-25 103
Msa1437140 MtrunA17_Chr8g0374111 68.966 58 18 0 136 193 29 86 1.60e-24 101
Msa1437140 MtrunA17_Chr8g0346551 66.102 59 20 0 131 189 19 77 3.83e-24 101
Msa1437140 MtrunA17_Chr8g0374251 75.472 53 13 0 138 190 70 122 3.99e-24 103
Msa1437140 MtrunA17_Chr2g0326001 56.098 82 28 1 108 189 20 93 4.62e-24 102
Msa1437140 MtrunA17_Chr4g0061761 71.698 53 15 0 134 186 38 90 4.70e-24 102
Msa1437140 MtrunA17_Chr1g0177251 59.211 76 30 1 131 205 6 81 5.55e-24 101
Msa1437140 MtrunA17_Chr8g0341671 73.077 52 14 0 136 187 20 71 6.78e-24 99.8
Msa1437140 MtrunA17_Chr2g0308011 75.510 49 12 0 136 184 37 85 8.76e-24 99.0
Msa1437140 MtrunA17_Chr4g0010151 61.290 62 24 0 128 189 74 135 9.87e-24 102
Msa1437140 MtrunA17_Chr4g0047001 47.222 108 41 3 93 189 6 108 1.10e-23 102
Msa1437140 MtrunA17_Chr2g0328021 66.667 57 19 0 138 194 64 120 1.73e-23 100
Msa1437140 MtrunA17_Chr7g0223311 41.176 119 68 2 86 203 28 145 1.78e-23 101
Msa1437140 MtrunA17_Chr8g0367161 52.000 75 36 0 115 189 11 85 3.09e-23 100
Msa1437140 MtrunA17_Chr4g0030051 66.154 65 21 1 125 188 29 93 4.09e-23 99.0
Msa1437140 MtrunA17_Chr3g0126201 68.421 57 17 1 134 189 48 104 7.25e-23 99.4
Msa1437140 MtrunA17_Chr1g0188851 67.925 53 17 0 136 188 43 95 8.59e-23 98.2
Msa1437140 MtrunA17_Chr4g0031411 63.333 60 22 0 129 188 68 127 1.22e-22 98.6
Msa1437140 MtrunA17_Chr2g0282051 74.074 54 13 1 136 189 46 98 5.81e-22 95.5
Msa1437140 MtrunA17_Chr5g0411951 65.455 55 19 0 132 186 39 93 7.03e-22 96.7
Msa1437140 MtrunA17_Chr2g0282441 72.000 50 14 0 138 187 27 76 1.15e-21 95.9
Msa1437140 MtrunA17_Chr2g0282511 73.469 49 13 0 136 184 45 93 1.61e-21 95.1
Msa1437140 MtrunA17_Chr4g0047761 69.231 52 16 0 138 189 74 125 1.68e-21 95.1
Msa1437140 MtrunA17_Chr7g0237921 69.231 52 16 0 138 189 78 129 1.75e-21 95.5
Msa1437140 MtrunA17_Chr3g0117601 59.091 66 26 1 122 186 46 111 3.50e-21 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437140 AT5G39660.3 41.051 514 202 19 6 477 3 457 1.06e-89 281
Msa1437140 AT5G39660.1 41.051 514 202 19 6 477 3 457 1.06e-89 281
Msa1437140 AT5G39660.2 41.051 514 202 19 6 477 3 457 1.06e-89 281
Msa1437140 AT3G47500.1 41.093 494 223 23 1 475 2 446 1.56e-81 260
Msa1437140 AT5G62430.1 38.095 378 122 16 108 475 21 296 3.09e-55 186
Msa1437140 AT1G69570.1 33.065 496 212 20 1 476 1 396 2.43e-50 176
Msa1437140 AT1G26790.1 31.263 499 186 24 1 476 7 371 2.00e-38 144
Msa1437140 AT1G29160.1 85.000 60 9 0 130 189 56 115 5.66e-35 129
Msa1437140 AT2G34140.1 81.667 60 11 0 130 189 52 111 4.43e-33 123
Msa1437140 AT5G60200.1 58.333 72 30 0 132 203 51 122 1.97e-25 105
Msa1437140 AT3G45610.1 45.263 95 52 0 101 195 5 99 4.17e-25 103
Msa1437140 AT5G60850.1 73.214 56 15 0 136 191 51 106 5.75e-25 105
Msa1437140 AT1G51700.1 68.421 57 18 0 136 192 33 89 1.89e-24 100
Msa1437140 AT3G61850.2 60.870 69 27 0 124 192 50 118 3.02e-24 102
Msa1437140 AT3G61850.3 60.870 69 27 0 124 192 50 118 3.02e-24 102
Msa1437140 AT3G61850.1 60.870 69 27 0 124 192 62 130 3.62e-24 102
Msa1437140 AT3G61850.5 60.870 69 27 0 124 192 50 118 5.11e-24 102
Msa1437140 AT3G61850.4 60.870 69 27 0 124 192 62 130 5.54e-24 102
Msa1437140 AT3G50410.1 68.966 58 18 0 136 193 30 87 7.23e-24 100
Msa1437140 AT3G55370.1 65.000 60 21 0 132 191 72 131 1.31e-23 101
Msa1437140 AT3G21270.1 76.471 51 12 0 138 188 31 81 1.32e-23 98.6
Msa1437140 AT3G55370.2 65.000 60 21 0 132 191 72 131 1.36e-23 102
Msa1437140 AT4G24060.1 68.421 57 18 0 133 189 50 106 1.43e-23 102
Msa1437140 AT3G55370.3 65.000 60 21 0 132 191 117 176 1.59e-23 102
Msa1437140 AT1G07640.1 68.333 60 18 1 138 196 23 82 1.75e-23 100
Msa1437140 AT2G28510.1 67.797 59 19 0 138 196 50 108 1.78e-23 100
Msa1437140 AT1G07640.2 68.333 60 18 1 138 196 79 138 2.75e-23 100
Msa1437140 AT1G07640.3 68.333 60 18 1 138 196 87 146 3.54e-23 100
Msa1437140 AT4G38000.1 55.844 77 29 2 135 210 40 112 4.52e-23 98.6
Msa1437140 AT2G28810.2 62.295 61 23 0 127 187 68 128 5.41e-23 99.8
Msa1437140 AT2G37590.1 56.061 66 29 0 124 189 77 142 6.68e-23 99.8
Msa1437140 AT5G66940.1 35.393 178 90 6 136 290 32 207 7.02e-23 97.4
Msa1437140 AT2G28810.1 62.295 61 23 0 127 187 85 145 8.11e-23 99.8
Msa1437140 AT1G28310.1 72.222 54 15 0 136 189 27 80 1.07e-22 99.0
Msa1437140 AT1G28310.2 72.222 54 15 0 136 189 51 104 1.75e-22 98.6
Msa1437140 AT5G65590.1 67.857 56 18 0 136 191 41 96 2.21e-22 97.8
Msa1437140 AT3G52440.2 43.299 97 49 2 110 200 12 108 2.23e-22 97.1
Msa1437140 AT1G64620.1 67.308 52 17 0 133 184 46 97 2.81e-22 98.2
Msa1437140 AT3G52440.1 57.353 68 28 1 134 200 22 89 3.28e-22 95.9
Msa1437140 AT1G21340.1 64.286 56 20 0 138 193 40 95 4.15e-22 95.9
Msa1437140 AT1G47655.1 71.429 49 14 0 136 184 29 77 1.12e-21 93.6
Msa1437140 AT4G00940.1 64.407 59 21 0 131 189 63 121 1.21e-21 95.5
Msa1437140 AT4G00940.3 64.407 59 21 0 131 189 63 121 1.21e-21 95.5
Msa1437140 AT4G00940.2 64.407 59 21 0 131 189 63 121 1.21e-21 95.5
Msa1437140 AT5G02460.1 63.793 58 21 0 132 189 91 148 1.81e-21 96.7
Msa1437140 AT2G46590.1 42.268 97 55 1 87 183 20 115 3.41e-21 95.1
Msa1437140 AT2G46590.2 42.268 97 55 1 87 183 32 127 4.15e-21 95.1
Msa1437140 AT4G21050.1 58.209 67 28 0 123 189 11 77 5.39e-21 91.7
Msa1437140 AT5G62940.1 62.295 61 22 1 127 186 63 123 3.13e-20 92.8
Msa1437140 AT4G21040.1 62.264 53 20 0 138 190 27 79 2.44e-18 84.3
Msa1437140 AT4G21080.1 60.377 53 21 0 138 190 27 79 1.32e-17 82.8
Msa1437140 AT4G21030.1 59.091 44 18 0 138 181 23 66 1.52e-11 63.9

Find 129 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTAGTTGAAACTTTA+TGG 0.068102 tig0028150:+42481 Msa1437140:three_prime_UTR
CCAACATGAATTTCTGAAAT+TGG 0.133092 tig0028150:-39407 None:intergenic
TCATAATCACTTATATATTT+TGG 0.145452 tig0028150:+42052 Msa1437140:exon
CATTCTATCCTGCAACTTAT+TGG 0.150210 tig0028150:+41624 Msa1437140:CDS
CTAATCTGGCATGGTTTATT+AGG 0.185719 tig0028150:+42453 Msa1437140:three_prime_UTR
ATTCTATCCTGCAACTTATT+GGG 0.232977 tig0028150:+41625 Msa1437140:CDS
CTGAACAAGAACCACATTAA+TGG 0.264740 tig0028150:+42248 Msa1437140:three_prime_UTR
GGGTTCAATTTGTACTTTCC+TGG 0.266809 tig0028150:+42390 Msa1437140:three_prime_UTR
TCCTCCGCGAAGACTCTTTC+AGG 0.296594 tig0028150:+41925 Msa1437140:CDS
GCAAGAACTGCCAGAGATAT+TGG 0.302290 tig0028150:+41111 Msa1437140:CDS
CTCTTAGATGTATATAAATA+AGG 0.319140 tig0028150:+42350 Msa1437140:three_prime_UTR
GAGAGTTTGTAGTAGAGTTA+TGG 0.354581 tig0028150:-41715 None:intergenic
TTGGTTGCGTCAAACTGATT+TGG 0.359459 tig0028150:+42086 Msa1437140:three_prime_UTR
GACTCTGCGATCAAACTGTT+TGG 0.377035 tig0028150:+39374 Msa1437140:CDS
CAATGTAGCAACCTCCCTTT+CGG 0.382427 tig0028150:-40928 None:intergenic
GCCAACCGAACAGAAGAAAA+AGG 0.384313 tig0028150:+42198 Msa1437140:three_prime_UTR
AGCTCTTTCTGGACAACCCT+TGG 0.392158 tig0028150:+41875 Msa1437140:CDS
ATCCTCCCCTTGTTCTTCAC+TGG 0.395303 tig0028150:-41390 None:intergenic
GTGCAAAATTACACAAGAAA+TGG 0.400392 tig0028150:+41326 Msa1437140:CDS
TGCACCTTCCGTCGACTTTG+TGG 0.406190 tig0028150:-41438 None:intergenic
CCTTGTTCTTCACTGGTATG+AGG 0.408705 tig0028150:-41383 None:intergenic
TATATACATCTAAGAGGTCT+TGG 0.409722 tig0028150:-42343 None:intergenic
CTCCCTTGAATGTTTACCTA+AGG 0.416607 tig0028150:-41741 None:intergenic
CTTGAATGTTTACCTAAGGT+TGG 0.421534 tig0028150:-41737 None:intergenic
AACGGTACAATCCTTACATT+TGG 0.421611 tig0028150:+41245 Msa1437140:CDS
TTATATATACATGAACTAAC+AGG 0.424598 tig0028150:-42283 None:intergenic
TCAGTTCTAGAAGTTGCATC+TGG 0.425578 tig0028150:-40882 None:intergenic
CAACCTTAGGTAAACATTCA+AGG 0.427611 tig0028150:+41738 Msa1437140:CDS
AAGCGACACTTCAGAATTCT+CGG 0.433945 tig0028150:+41201 Msa1437140:CDS
TTCAAAGACCGAAGAAGAAC+AGG 0.434370 tig0028150:+40956 Msa1437140:CDS
TGTCTCGTCCTGTTCTTCTT+CGG 0.435826 tig0028150:-40964 None:intergenic
GTACAACCCCAATAAGTTGC+AGG 0.438881 tig0028150:-41632 None:intergenic
TGTGGTTTCCTAAAACTTTG+AGG 0.440466 tig0028150:+41825 Msa1437140:CDS
TCATGAATCCAGAACACAAC+GGG 0.441078 tig0028150:+40792 Msa1437140:intron
CCTAGACAATGCCGCCGGAT+TGG 0.441868 tig0028150:-42008 None:intergenic
GAGTTATGGTTTGCACCATT+CGG 0.443392 tig0028150:-41701 None:intergenic
TTTCTGCGACCGGCACCTAC+TGG 0.444047 tig0028150:-41161 None:intergenic
GCTCTTTCTGGACAACCCTT+GGG 0.447364 tig0028150:+41876 Msa1437140:CDS
CACCTTGTGGTGGGAAGCTA+TGG 0.449902 tig0028150:-41499 None:intergenic
TTCAGTCTTGCAAGCCAATC+CGG 0.451150 tig0028150:+41994 Msa1437140:CDS
TTCTATCCTGCAACTTATTG+GGG 0.466905 tig0028150:+41626 Msa1437140:CDS
TTTAGTTGAAACTTTATGGC+TGG 0.467066 tig0028150:+42485 Msa1437140:three_prime_UTR
CACCGGCAGTCCAATATCTC+TGG 0.470878 tig0028150:-41121 None:intergenic
CTCGTTTGCATCGGATTCCA+TGG 0.476868 tig0028150:-41554 None:intergenic
GCAGTTCTTGCAGAAATGAC+GGG 0.478653 tig0028150:-41099 None:intergenic
GATTGTACCGTTGCATTTCA+AGG 0.479174 tig0028150:-41234 None:intergenic
CAATAAGTTGCAGGATAGAA+TGG 0.479650 tig0028150:-41623 None:intergenic
GGAAAATCCTGATGGACAAA+AGG 0.486001 tig0028150:-41597 None:intergenic
CTTATTTATATACATCTAAG+AGG 0.488347 tig0028150:-42349 None:intergenic
CCAATTTCAGAAATTCATGT+TGG 0.497810 tig0028150:+39407 Msa1437140:CDS
GATGGACAAAAGGCCGGTGG+TGG 0.498700 tig0028150:-41587 None:intergenic
TCATTGACTCTAATCTGGCA+TGG 0.501353 tig0028150:+42444 Msa1437140:three_prime_UTR
ACTACAAACTCTCCAACCTT+AGG 0.501563 tig0028150:+41725 Msa1437140:CDS
TAATGTGGTTCTTGTTCAGT+TGG 0.504875 tig0028150:-42244 None:intergenic
GGCAGTTCTTGCAGAAATGA+CGG 0.505612 tig0028150:-41100 None:intergenic
AAGGATAAGAATAAGAATGA+GGG 0.506790 tig0028150:+42369 Msa1437140:three_prime_UTR
ATCAGTGAGCTCGTTTGCAT+CGG 0.516857 tig0028150:-41563 None:intergenic
CGTGGAATGTTCCATGCACT+TGG 0.517020 tig0028150:-41659 None:intergenic
GTGAGTTGGATCCAAATGTA+AGG 0.517691 tig0028150:-41256 None:intergenic
AGCTTGTTCTTGAGATACAT+TGG 0.519714 tig0028150:-41465 None:intergenic
TTGTCCTCGTTGTAGTAGCA+TGG 0.523986 tig0028150:+41034 Msa1437140:CDS
TGCCAGAGATATTGGACTGC+CGG 0.524544 tig0028150:+41119 Msa1437140:CDS
ACCTACTGGTACGTTTCTCA+TGG 0.524953 tig0028150:-41147 None:intergenic
TACCGTTGCATTTCAAGGAA+GGG 0.526711 tig0028150:-41229 None:intergenic
TAAGGATAAGAATAAGAATG+AGG 0.530067 tig0028150:+42368 Msa1437140:three_prime_UTR
TACGTTTCTCATGGTTCCAC+CGG 0.531107 tig0028150:-41138 None:intergenic
TGAATCACATAAAGGTGAGT+TGG 0.531921 tig0028150:-41270 None:intergenic
GATGCCACTGAATCACATAA+AGG 0.533836 tig0028150:-41278 None:intergenic
GTACCGTTGCATTTCAAGGA+AGG 0.535966 tig0028150:-41230 None:intergenic
TCTTGCAGAAATGACGGGGT+TGG 0.542522 tig0028150:-41094 None:intergenic
TTTGCACCATTCGGTGATGA+TGG 0.554189 tig0028150:-41692 None:intergenic
GGAAAATAGCCACCTTGTGG+TGG 0.564170 tig0028150:-41509 None:intergenic
CACCCTTCCTTGAAATGCAA+CGG 0.569292 tig0028150:+41227 Msa1437140:CDS
ACTACAAATTAACAAGACTT+CGG 0.569954 tig0028150:-42161 None:intergenic
TTGTTCTTGAGATACATTGG+TGG 0.575585 tig0028150:-41462 None:intergenic
GAACTCCTTGGCATTTACCA+TGG 0.576696 tig0028150:+41537 Msa1437140:CDS
CAAGAACAAGCTATGTGGAA+TGG 0.577149 tig0028150:+41476 Msa1437140:CDS
AACCTTAGGTAAACATTCAA+GGG 0.580141 tig0028150:+41739 Msa1437140:CDS
CTCACCTTTATGTGATTCAG+TGG 0.580504 tig0028150:+41274 Msa1437140:CDS
ATTCTTCTGTTGATTGTGCA+AGG 0.584727 tig0028150:-40851 None:intergenic
AATGCCTGAAAGAGTCTTCG+CGG 0.584851 tig0028150:-41929 None:intergenic
AATGGCATGGAAAATCCTGA+TGG 0.590674 tig0028150:-41605 None:intergenic
TATCTCAAGAACAAGCTATG+TGG 0.592377 tig0028150:+41471 Msa1437140:CDS
TGTTACAGTATCCACCGAAA+GGG 0.593158 tig0028150:+40914 Msa1437140:CDS
CAAGTGCATGGAACATTCCA+CGG 0.594597 tig0028150:+41660 Msa1437140:CDS
CCTCATACCAGTGAAGAACA+AGG 0.595660 tig0028150:+41383 Msa1437140:CDS
GGCCATAGCTTCCCACCACA+AGG 0.598341 tig0028150:+41497 Msa1437140:CDS
CATTATGAAAGAAAGAAGCC+AGG 0.602999 tig0028150:-42408 None:intergenic
AATCCTGATGGACAAAAGGC+CGG 0.603585 tig0028150:-41593 None:intergenic
GGATCAATCAAATAAATCGT+CGG 0.604223 tig0028150:+41409 Msa1437140:CDS
ACCTTCCGTCGACTTTGTGG+AGG 0.610776 tig0028150:-41435 None:intergenic
GGATTCCATGGTAAATGCCA+AGG 0.611774 tig0028150:-41542 None:intergenic
CTGTTACAGTATCCACCGAA+AGG 0.612746 tig0028150:+40913 Msa1437140:CDS
CTAAAATCAAGCGAAGGAGA+TGG 0.613491 tig0028150:+41773 Msa1437140:CDS
TGTAGCAACCTCCCTTTCGG+TGG 0.614289 tig0028150:-40925 None:intergenic
GAAAATAGCCACCTTGTGGT+GGG 0.619044 tig0028150:-41508 None:intergenic
GATGATGGTTGTGCTTGCCG+TGG 0.621977 tig0028150:-41677 None:intergenic
ATGCTACTACAACGAGGACA+AGG 0.624918 tig0028150:-41032 None:intergenic
AGTTGCAGGATAGAATGGCA+TGG 0.625575 tig0028150:-41618 None:intergenic
TCTCGTGAAAAGGTTGAACA+CGG 0.626649 tig0028150:-42109 None:intergenic
GAGCTCACTGATTCCACCAC+CGG 0.627819 tig0028150:+41574 Msa1437140:CDS
CAGTTCTTGCAGAAATGACG+GGG 0.628674 tig0028150:-41098 None:intergenic
GTTGTACTATGCCAAGTGCA+TGG 0.629999 tig0028150:+41648 Msa1437140:CDS
ACAAGAATGCTCCATTAATG+TGG 0.631067 tig0028150:-42259 None:intergenic
TAAGCGAAGAAAAGAGCTTG+TGG 0.632631 tig0028150:+41807 Msa1437140:CDS
TACCAGTGAAGAACAAGGGG+AGG 0.634191 tig0028150:+41388 Msa1437140:CDS
TACAGTATCCACCGAAAGGG+AGG 0.634842 tig0028150:+40917 Msa1437140:CDS
ACCTCCACAAAGTCGACGGA+AGG 0.636006 tig0028150:+41434 Msa1437140:CDS
ACAAGAACATGAGATTGAGA+AGG 0.637128 tig0028150:+39517 Msa1437140:CDS
AGGATAAGAATAAGAATGAG+GGG 0.637694 tig0028150:+42370 Msa1437140:three_prime_UTR
AACATGCTAAAATCAAGCGA+AGG 0.639475 tig0028150:+41767 Msa1437140:CDS
CTCATACCAGTGAAGAACAA+GGG 0.644364 tig0028150:+41384 Msa1437140:CDS
TCATACCAGTGAAGAACAAG+GGG 0.646136 tig0028150:+41385 Msa1437140:CDS
AGAAACGTACCAGTAGGTGC+CGG 0.653444 tig0028150:+41152 Msa1437140:CDS
TTTGAGGATCGATGACTCAG+AGG 0.659653 tig0028150:+41841 Msa1437140:CDS
CAGAGATATTGGACTGCCGG+TGG 0.661022 tig0028150:+41122 Msa1437140:CDS
CTTAGGTAAACATTCAAGGG+AGG 0.664142 tig0028150:+41742 Msa1437140:CDS
GGTTACCTCCACAAAGTCGA+CGG 0.667234 tig0028150:+41430 Msa1437140:CDS
TGAGGAAAATAGCCACCTTG+TGG 0.671039 tig0028150:-41512 None:intergenic
GCACAACCATCATCACCGAA+TGG 0.672816 tig0028150:+41686 Msa1437140:CDS
ACCATGAGAAACGTACCAGT+AGG 0.705884 tig0028150:+41146 Msa1437140:CDS
CCTGATGGACAAAAGGCCGG+TGG 0.706000 tig0028150:-41590 None:intergenic
GGACGAGACAAGTAACACAC+AGG 0.712817 tig0028150:+40977 Msa1437140:CDS
GCCTGAAAGAGTCTTCGCGG+AGG 0.713974 tig0028150:-41926 None:intergenic
CATAGCTTCCCACCACAAGG+TGG 0.714183 tig0028150:+41500 Msa1437140:CDS
AGTCTTGCAAGCCAATCCGG+CGG 0.717524 tig0028150:+41997 Msa1437140:CDS
AAATGCCAAGGAGTTCCATG+AGG 0.739950 tig0028150:-41530 None:intergenic
TTCATGAATCCAGAACACAA+CGG 0.740548 tig0028150:+40791 Msa1437140:intron
GTGTCCATGCTACTACAACG+AGG 0.808267 tig0028150:-41038 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGAGAATTTTGATTTTT+TGG + tig0028150:39547-39566 Msa1437140:intron 15.0%
!!! AATAATTTTTTCACTTTTCA+AGG + tig0028150:39748-39767 Msa1437140:intron 15.0%
!! TTAAACTACATAGTATAATT+TGG - tig0028150:39842-39861 None:intergenic 15.0%
!!! TAAGTTTTTGAAGTTATATT+TGG + tig0028150:39859-39878 Msa1437140:intron 15.0%
!! TTTATTTCATATACCAAATA+AGG - tig0028150:39925-39944 None:intergenic 15.0%
!!! TTCTTTTTATGATATTAATG+TGG + tig0028150:40721-40740 Msa1437140:intron 15.0%
!!! TCATAATCACTTATATATTT+TGG + tig0028150:42052-42071 Msa1437140:exon 15.0%
!! ATTATTTAGTTGAAACTTTA+TGG + tig0028150:42481-42500 Msa1437140:three_prime_UTR 15.0%
!! AAAAAGAATGATGTTGTAAA+AGG - tig0028150:39288-39307 None:intergenic 20.0%
!! ATTCTTCCATTTCAAATAAA+GGG - tig0028150:39600-39619 None:intergenic 20.0%
!! TATTCTTCCATTTCAAATAA+AGG - tig0028150:39601-39620 None:intergenic 20.0%
!! TGAAATGGAAGAATATTTAA+TGG + tig0028150:39606-39625 Msa1437140:intron 20.0%
!! GAAATGGAAGAATATTTAAT+GGG + tig0028150:39607-39626 Msa1437140:intron 20.0%
!! ATTGAAAGAATTACCTTATT+TGG + tig0028150:39909-39928 Msa1437140:intron 20.0%
!!! AAATCATGTTAGTTTATGTT+TGG - tig0028150:40187-40206 None:intergenic 20.0%
!!! CTTTTTCTTGTTTGAATTTT+GGG + tig0028150:40219-40238 Msa1437140:intron 20.0%
!!! TTTGAATTTTGGGTTTTATA+TGG + tig0028150:40229-40248 Msa1437140:intron 20.0%
!! TTTATTGCGAAAAAAACATT+TGG - tig0028150:40589-40608 None:intergenic 20.0%
!! CATGAATAAATACTAATCTT+TGG + tig0028150:40766-40785 Msa1437140:intron 20.0%
!!! TATTTTGGTAATTGTGTTTT+TGG + tig0028150:42067-42086 Msa1437140:three_prime_UTR 20.0%
!! TTATATATACATGAACTAAC+AGG - tig0028150:42286-42305 None:intergenic 20.0%
!! CTTATTTATATACATCTAAG+AGG - tig0028150:42352-42371 None:intergenic 20.0%
!! CTCTTAGATGTATATAAATA+AGG + tig0028150:42350-42369 Msa1437140:three_prime_UTR 20.0%
!!! GTTTTTAGCAACAAAAATGT+TGG + tig0028150:39343-39362 Msa1437140:exon 25.0%
!! TTATGACCCTTTATTTGAAA+TGG + tig0028150:39591-39610 Msa1437140:intron 25.0%
!!! AAAATTCATTTGACTTGCTT+TGG + tig0028150:39655-39674 Msa1437140:intron 25.0%
!! ATTTTGGATTGTTTTCAATC+TGG + tig0028150:39785-39804 Msa1437140:intron 25.0%
!! TTTTGGATTGTTTTCAATCT+GGG + tig0028150:39786-39805 Msa1437140:intron 25.0%
!! TTTGAAGTTATATTTGGCTT+TGG + tig0028150:39865-39884 Msa1437140:intron 25.0%
!!! GGTGAAGTTTTATTTATTCA+TGG + tig0028150:39886-39905 Msa1437140:intron 25.0%
!! TATTGAAAGGAAAGTGATTT+TGG + tig0028150:40060-40079 Msa1437140:intron 25.0%
!! TTAGTTTATGTTTGGAATCA+CGG - tig0028150:40179-40198 None:intergenic 25.0%
!!! GCTTTTTCTTGTTTGAATTT+TGG + tig0028150:40218-40237 Msa1437140:intron 25.0%
!!! TTTAAAATTCGACAGTTTTC+TGG - tig0028150:40267-40286 None:intergenic 25.0%
!!! AAACTGTCGAATTTTAAAAC+TGG + tig0028150:40269-40288 Msa1437140:intron 25.0%
! ACTACAAATTAACAAGACTT+CGG - tig0028150:42164-42183 None:intergenic 25.0%
! TAAGGATAAGAATAAGAATG+AGG + tig0028150:42368-42387 Msa1437140:three_prime_UTR 25.0%
! AAGGATAAGAATAAGAATGA+GGG + tig0028150:42369-42388 Msa1437140:three_prime_UTR 25.0%
!! CCAACATGAATTTCTGAAAT+TGG - tig0028150:39410-39429 None:intergenic 30.0%
CCAATTTCAGAAATTCATGT+TGG + tig0028150:39407-39426 Msa1437140:CDS 30.0%
!! GGAGTTTCAATGTTTGATTT+TGG + tig0028150:39769-39788 Msa1437140:intron 30.0%
AGAATTAGGAAGCTATTGAA+AGG + tig0028150:40047-40066 Msa1437140:intron 30.0%
GTTCAACAAAATCACAATCA+CGG + tig0028150:40128-40147 Msa1437140:intron 30.0%
CACAAACTGATACAAAAACA+AGG + tig0028150:40457-40476 Msa1437140:intron 30.0%
TCGAATAAAAAGAACGAAGA+TGG + tig0028150:40825-40844 Msa1437140:CDS 30.0%
GTGCAAAATTACACAAGAAA+TGG + tig0028150:41326-41345 Msa1437140:CDS 30.0%
GGATCAATCAAATAAATCGT+CGG + tig0028150:41409-41428 Msa1437140:CDS 30.0%
ATTCTATCCTGCAACTTATT+GGG + tig0028150:41625-41644 Msa1437140:CDS 30.0%
AACCTTAGGTAAACATTCAA+GGG + tig0028150:41739-41758 Msa1437140:CDS 30.0%
!!! GTTGTTGTTTTTAATCCCAA+GGG - tig0028150:41894-41913 None:intergenic 30.0%
! TTTGTGATTTTCTCGTGAAA+AGG - tig0028150:42122-42141 None:intergenic 30.0%
TATATACATCTAAGAGGTCT+TGG - tig0028150:42346-42365 None:intergenic 30.0%
AGGATAAGAATAAGAATGAG+GGG + tig0028150:42370-42389 Msa1437140:three_prime_UTR 30.0%
!!! GTTTTTCATTGACTCTAATC+TGG + tig0028150:42439-42458 Msa1437140:three_prime_UTR 30.0%
TTTAGTTGAAACTTTATGGC+TGG + tig0028150:42485-42504 Msa1437140:three_prime_UTR 30.0%
ACAAGAACATGAGATTGAGA+AGG + tig0028150:39517-39536 Msa1437140:CDS 35.0%
ACCTTGTTGATGCTAGAATT+AGG + tig0028150:40033-40052 Msa1437140:intron 35.0%
TCCTAATTCTAGCATCAACA+AGG - tig0028150:40037-40056 None:intergenic 35.0%
! ATTCGACAGTTTTCTGGATT+TGG - tig0028150:40261-40280 None:intergenic 35.0%
! TCAGTTTTACTCAATTCCCT+TGG + tig0028150:40345-40364 Msa1437140:intron 35.0%
AATTCCCTTGGTTTAATGTC+TGG + tig0028150:40357-40376 Msa1437140:intron 35.0%
AACACCAGACATTAAACCAA+GGG - tig0028150:40364-40383 None:intergenic 35.0%
AAACACCAGACATTAAACCA+AGG - tig0028150:40365-40384 None:intergenic 35.0%
TTAATGTCTGGTGTTTGTGT+CGG + tig0028150:40369-40388 Msa1437140:intron 35.0%
TCGAATGATAGGATCCAATT+TGG - tig0028150:40418-40437 None:intergenic 35.0%
GTTAGGAAACATCGAATGAT+AGG - tig0028150:40429-40448 None:intergenic 35.0%
CAGTTTGTGTAGAATCTGTT+AGG - tig0028150:40446-40465 None:intergenic 35.0%
CATTAGCAGTAGACTCAATA+TGG - tig0028150:40499-40518 None:intergenic 35.0%
TTCATGAATCCAGAACACAA+CGG + tig0028150:40791-40810 Msa1437140:intron 35.0%
! ATTCTTCTGTTGATTGTGCA+AGG - tig0028150:40854-40873 None:intergenic 35.0%
! CTATTTTGTCCGGTTTTTTG+AGG - tig0028150:41010-41029 None:intergenic 35.0%
AACGGTACAATCCTTACATT+TGG + tig0028150:41245-41264 Msa1437140:CDS 35.0%
TGAATCACATAAAGGTGAGT+TGG - tig0028150:41273-41292 None:intergenic 35.0%
TTGTTCTTGAGATACATTGG+TGG - tig0028150:41465-41484 None:intergenic 35.0%
! AGCTTGTTCTTGAGATACAT+TGG - tig0028150:41468-41487 None:intergenic 35.0%
TATCTCAAGAACAAGCTATG+TGG + tig0028150:41471-41490 Msa1437140:CDS 35.0%
CAATAAGTTGCAGGATAGAA+TGG - tig0028150:41626-41645 None:intergenic 35.0%
CATTCTATCCTGCAACTTAT+TGG + tig0028150:41624-41643 Msa1437140:CDS 35.0%
TTCTATCCTGCAACTTATTG+GGG + tig0028150:41626-41645 Msa1437140:CDS 35.0%
GAGAGTTTGTAGTAGAGTTA+TGG - tig0028150:41718-41737 None:intergenic 35.0%
CTTGAATGTTTACCTAAGGT+TGG - tig0028150:41740-41759 None:intergenic 35.0%
CAACCTTAGGTAAACATTCA+AGG + tig0028150:41738-41757 Msa1437140:CDS 35.0%
AACATGCTAAAATCAAGCGA+AGG + tig0028150:41767-41786 Msa1437140:CDS 35.0%
TGTGGTTTCCTAAAACTTTG+AGG + tig0028150:41825-41844 Msa1437140:CDS 35.0%
! TCATCGATCCTCAAAGTTTT+AGG - tig0028150:41836-41855 None:intergenic 35.0%
AAGCAGAAAAAAGCTCTTTC+TGG + tig0028150:41864-41883 Msa1437140:CDS 35.0%
!!! CGTTGTTGTTTTTAATCCCA+AGG - tig0028150:41895-41914 None:intergenic 35.0%
! ACCAACCTTTTTCTTCTGTT+CGG - tig0028150:42206-42225 None:intergenic 35.0%
TAATGTGGTTCTTGTTCAGT+TGG - tig0028150:42247-42266 None:intergenic 35.0%
CTGAACAAGAACCACATTAA+TGG + tig0028150:42248-42267 Msa1437140:three_prime_UTR 35.0%
ACAAGAATGCTCCATTAATG+TGG - tig0028150:42262-42281 None:intergenic 35.0%
CATTATGAAAGAAAGAAGCC+AGG - tig0028150:42411-42430 None:intergenic 35.0%
CTAATCTGGCATGGTTTATT+AGG + tig0028150:42453-42472 Msa1437140:three_prime_UTR 35.0%
GAACTGAGAGTTACAAGAGT+TGG - tig0028150:40003-40022 None:intergenic 40.0%
ACTCTTGTAACTCTCAGTTC+AGG + tig0028150:40003-40022 Msa1437140:intron 40.0%
TAGTAAAAGCCACACTTTCG+AGG + tig0028150:40106-40125 Msa1437140:intron 40.0%
TTTGTTGAACCTCGAAAGTG+TGG - tig0028150:40118-40137 None:intergenic 40.0%
CGGTGAATTTCACGAAATCA+TGG - tig0028150:40159-40178 None:intergenic 40.0%
GGAATCTGCTCAAAGATGTT+AGG - tig0028150:40295-40314 None:intergenic 40.0%
GGGGATTAACTCATCCAAAT+TGG + tig0028150:40401-40420 Msa1437140:intron 40.0%
TCATGAATCCAGAACACAAC+GGG + tig0028150:40792-40811 Msa1437140:intron 40.0%
!! TCAGTTCTAGAAGTTGCATC+TGG - tig0028150:40885-40904 None:intergenic 40.0%
TGTTACAGTATCCACCGAAA+GGG + tig0028150:40914-40933 Msa1437140:CDS 40.0%
TTCAAAGACCGAAGAAGAAC+AGG + tig0028150:40956-40975 Msa1437140:CDS 40.0%
GGATAAGCACCTCAAAAAAC+CGG + tig0028150:40998-41017 Msa1437140:CDS 40.0%
! GGACAAGGAACTATTTTGTC+CGG - tig0028150:41020-41039 None:intergenic 40.0%
AAGCGACACTTCAGAATTCT+CGG + tig0028150:41201-41220 Msa1437140:CDS 40.0%
TACCGTTGCATTTCAAGGAA+GGG - tig0028150:41232-41251 None:intergenic 40.0%
GATTGTACCGTTGCATTTCA+AGG - tig0028150:41237-41256 None:intergenic 40.0%
! GTGAGTTGGATCCAAATGTA+AGG - tig0028150:41259-41278 None:intergenic 40.0%
CTCACCTTTATGTGATTCAG+TGG + tig0028150:41274-41293 Msa1437140:CDS 40.0%
GATGCCACTGAATCACATAA+AGG - tig0028150:41281-41300 None:intergenic 40.0%
CTCATACCAGTGAAGAACAA+GGG + tig0028150:41384-41403 Msa1437140:CDS 40.0%
TCATACCAGTGAAGAACAAG+GGG + tig0028150:41385-41404 Msa1437140:CDS 40.0%
CAAGAACAAGCTATGTGGAA+TGG + tig0028150:41476-41495 Msa1437140:CDS 40.0%
! ATTTTCCTCATGGAACTCCT+TGG + tig0028150:41525-41544 Msa1437140:CDS 40.0%
! GGAAAATCCTGATGGACAAA+AGG - tig0028150:41600-41619 None:intergenic 40.0%
AATGGCATGGAAAATCCTGA+TGG - tig0028150:41608-41627 None:intergenic 40.0%
! GAGTTATGGTTTGCACCATT+CGG - tig0028150:41704-41723 None:intergenic 40.0%
ACTACAAACTCTCCAACCTT+AGG + tig0028150:41725-41744 Msa1437140:CDS 40.0%
CTCCCTTGAATGTTTACCTA+AGG - tig0028150:41744-41763 None:intergenic 40.0%
CTTAGGTAAACATTCAAGGG+AGG + tig0028150:41742-41761 Msa1437140:CDS 40.0%
CTAAAATCAAGCGAAGGAGA+TGG + tig0028150:41773-41792 Msa1437140:CDS 40.0%
TAAGCGAAGAAAAGAGCTTG+TGG + tig0028150:41807-41826 Msa1437140:CDS 40.0%
! TTTTCTCGTCGCACTTTGAA+GGG - tig0028150:41955-41974 None:intergenic 40.0%
! TTTTTCTCGTCGCACTTTGA+AGG - tig0028150:41956-41975 None:intergenic 40.0%
TTGGTTGCGTCAAACTGATT+TGG + tig0028150:42086-42105 Msa1437140:three_prime_UTR 40.0%
TCTCGTGAAAAGGTTGAACA+CGG - tig0028150:42112-42131 None:intergenic 40.0%
! ACCTTTTTCTTCTGTTCGGT+TGG - tig0028150:42202-42221 None:intergenic 40.0%
ACCGAACAGAAGAAAAAGGT+TGG + tig0028150:42202-42221 Msa1437140:three_prime_UTR 40.0%
GGGTTCAATTTGTACTTTCC+TGG + tig0028150:42390-42409 Msa1437140:three_prime_UTR 40.0%
!! TCATTGACTCTAATCTGGCA+TGG + tig0028150:42444-42463 Msa1437140:three_prime_UTR 40.0%
GACTCTGCGATCAAACTGTT+TGG + tig0028150:39374-39393 Msa1437140:CDS 45.0%
AAGTGCAGAGCATATGATGC+AGG - tig0028150:40316-40335 None:intergenic 45.0%
! TGTTTGTGTCGGTGCTTCAT+AGG + tig0028150:40380-40399 Msa1437140:intron 45.0%
! GTTTGTGTCGGTGCTTCATA+GGG + tig0028150:40381-40400 Msa1437140:intron 45.0%
! TTTGTGTCGGTGCTTCATAG+GGG + tig0028150:40382-40401 Msa1437140:intron 45.0%
GTCTACTGCTAATGCTCTCA+TGG + tig0028150:40505-40524 Msa1437140:intron 45.0%
! GTTTTTCTCCCGTTGTGTTC+TGG - tig0028150:40803-40822 None:intergenic 45.0%
CTGTTACAGTATCCACCGAA+AGG + tig0028150:40913-40932 Msa1437140:CDS 45.0%
CAATGTAGCAACCTCCCTTT+CGG - tig0028150:40931-40950 None:intergenic 45.0%
TGTCTCGTCCTGTTCTTCTT+CGG - tig0028150:40967-40986 None:intergenic 45.0%
ATGCTACTACAACGAGGACA+AGG - tig0028150:41035-41054 None:intergenic 45.0%
TTGTCCTCGTTGTAGTAGCA+TGG + tig0028150:41034-41053 Msa1437140:CDS 45.0%
CAGTTCTTGCAGAAATGACG+GGG - tig0028150:41101-41120 None:intergenic 45.0%
GCAGTTCTTGCAGAAATGAC+GGG - tig0028150:41102-41121 None:intergenic 45.0%
GGCAGTTCTTGCAGAAATGA+CGG - tig0028150:41103-41122 None:intergenic 45.0%
GCAAGAACTGCCAGAGATAT+TGG + tig0028150:41111-41130 Msa1437140:CDS 45.0%
TACGTTTCTCATGGTTCCAC+CGG - tig0028150:41141-41160 None:intergenic 45.0%
ACCATGAGAAACGTACCAGT+AGG + tig0028150:41146-41165 Msa1437140:CDS 45.0%
ACCTACTGGTACGTTTCTCA+TGG - tig0028150:41150-41169 None:intergenic 45.0%
!!! GCTCTTGTTTTTTCTGCGAC+CGG - tig0028150:41174-41193 None:intergenic 45.0%
CACCCTTCCTTGAAATGCAA+CGG + tig0028150:41227-41246 Msa1437140:CDS 45.0%
GTACCGTTGCATTTCAAGGA+AGG - tig0028150:41233-41252 None:intergenic 45.0%
CCTTGTTCTTCACTGGTATG+AGG - tig0028150:41386-41405 None:intergenic 45.0%
CCTCATACCAGTGAAGAACA+AGG + tig0028150:41383-41402 Msa1437140:CDS 45.0%
GAAAATAGCCACCTTGTGGT+GGG - tig0028150:41511-41530 None:intergenic 45.0%
TGAGGAAAATAGCCACCTTG+TGG - tig0028150:41515-41534 None:intergenic 45.0%
!! CAAGGTGGCTATTTTCCTCA+TGG + tig0028150:41515-41534 Msa1437140:CDS 45.0%
AAATGCCAAGGAGTTCCATG+AGG - tig0028150:41533-41552 None:intergenic 45.0%
GAACTCCTTGGCATTTACCA+TGG + tig0028150:41537-41556 Msa1437140:CDS 45.0%
GGATTCCATGGTAAATGCCA+AGG - tig0028150:41545-41564 None:intergenic 45.0%
ATCAGTGAGCTCGTTTGCAT+CGG - tig0028150:41566-41585 None:intergenic 45.0%
! AATCCTGATGGACAAAAGGC+CGG - tig0028150:41596-41615 None:intergenic 45.0%
AGTTGCAGGATAGAATGGCA+TGG - tig0028150:41621-41640 None:intergenic 45.0%
GTACAACCCCAATAAGTTGC+AGG - tig0028150:41635-41654 None:intergenic 45.0%
GTTGTACTATGCCAAGTGCA+TGG + tig0028150:41648-41667 Msa1437140:CDS 45.0%
CAAGTGCATGGAACATTCCA+CGG + tig0028150:41660-41679 Msa1437140:CDS 45.0%
! TTTGCACCATTCGGTGATGA+TGG - tig0028150:41695-41714 None:intergenic 45.0%
TTTGAGGATCGATGACTCAG+AGG + tig0028150:41841-41860 Msa1437140:CDS 45.0%
AATGCCTGAAAGAGTCTTCG+CGG - tig0028150:41932-41951 None:intergenic 45.0%
GTGCGACGAGAAAAATCACT+CGG + tig0028150:41961-41980 Msa1437140:CDS 45.0%
TTCAGTCTTGCAAGCCAATC+CGG + tig0028150:41994-42013 Msa1437140:CDS 45.0%
GCCAACCGAACAGAAGAAAA+AGG + tig0028150:42198-42217 Msa1437140:three_prime_UTR 45.0%
TACAGTATCCACCGAAAGGG+AGG + tig0028150:40917-40936 Msa1437140:CDS 50.0%
GGACGAGACAAGTAACACAC+AGG + tig0028150:40977-40996 Msa1437140:CDS 50.0%
GTGTCCATGCTACTACAACG+AGG - tig0028150:41041-41060 None:intergenic 50.0%
! TCTTGCAGAAATGACGGGGT+TGG - tig0028150:41097-41116 None:intergenic 50.0%
TGCCAGAGATATTGGACTGC+CGG + tig0028150:41119-41138 Msa1437140:CDS 50.0%
AGAAACGTACCAGTAGGTGC+CGG + tig0028150:41152-41171 Msa1437140:CDS 50.0%
TACCAGTGAAGAACAAGGGG+AGG + tig0028150:41388-41407 Msa1437140:CDS 50.0%
ATCCTCCCCTTGTTCTTCAC+TGG - tig0028150:41393-41412 None:intergenic 50.0%
GGTTACCTCCACAAAGTCGA+CGG + tig0028150:41430-41449 Msa1437140:CDS 50.0%
GGAAAATAGCCACCTTGTGG+TGG - tig0028150:41512-41531 None:intergenic 50.0%
CTCGTTTGCATCGGATTCCA+TGG - tig0028150:41557-41576 None:intergenic 50.0%
CGTGGAATGTTCCATGCACT+TGG - tig0028150:41662-41681 None:intergenic 50.0%
GCACAACCATCATCACCGAA+TGG + tig0028150:41686-41705 Msa1437140:CDS 50.0%
AGCTCTTTCTGGACAACCCT+TGG + tig0028150:41875-41894 Msa1437140:CDS 50.0%
GCTCTTTCTGGACAACCCTT+GGG + tig0028150:41876-41895 Msa1437140:CDS 50.0%
TGTAGCAACCTCCCTTTCGG+TGG - tig0028150:40928-40947 None:intergenic 55.0%
CACCGGCAGTCCAATATCTC+TGG - tig0028150:41124-41143 None:intergenic 55.0%
CAGAGATATTGGACTGCCGG+TGG + tig0028150:41122-41141 Msa1437140:CDS 55.0%
ACCTCCACAAAGTCGACGGA+AGG + tig0028150:41434-41453 Msa1437140:CDS 55.0%
!! ACCTTCCGTCGACTTTGTGG+AGG - tig0028150:41438-41457 None:intergenic 55.0%
!! TGCACCTTCCGTCGACTTTG+TGG - tig0028150:41441-41460 None:intergenic 55.0%
! CACCTTGTGGTGGGAAGCTA+TGG - tig0028150:41502-41521 None:intergenic 55.0%
CATAGCTTCCCACCACAAGG+TGG + tig0028150:41500-41519 Msa1437140:CDS 55.0%
!! GAGCTCACTGATTCCACCAC+CGG + tig0028150:41574-41593 Msa1437140:CDS 55.0%
! GATGATGGTTGTGCTTGCCG+TGG - tig0028150:41680-41699 None:intergenic 55.0%
TCCTCCGCGAAGACTCTTTC+AGG + tig0028150:41925-41944 Msa1437140:CDS 55.0%
AGTCTTGCAAGCCAATCCGG+CGG + tig0028150:41997-42016 Msa1437140:CDS 55.0%
TTTCTGCGACCGGCACCTAC+TGG - tig0028150:41164-41183 None:intergenic 60.0%
GGCCATAGCTTCCCACCACA+AGG + tig0028150:41497-41516 Msa1437140:CDS 60.0%
GATGGACAAAAGGCCGGTGG+TGG - tig0028150:41590-41609 None:intergenic 60.0%
! CCTGATGGACAAAAGGCCGG+TGG - tig0028150:41593-41612 None:intergenic 60.0%
! CCACCGGCCTTTTGTCCATC+AGG + tig0028150:41590-41609 Msa1437140:CDS 60.0%
GCCTGAAAGAGTCTTCGCGG+AGG - tig0028150:41929-41948 None:intergenic 60.0%
CCTAGACAATGCCGCCGGAT+TGG - tig0028150:42011-42030 None:intergenic 60.0%
CCAATCCGGCGGCATTGTCT+AGG + tig0028150:42008-42027 Msa1437140:CDS 60.0%
AGCGACCTAGACAATGCCGC+CGG - tig0028150:42016-42035 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0028150 gene 39261 42540 39261 ID=Msa1437140;Name=Msa1437140
tig0028150 mRNA 39261 42540 39261 ID=Msa1437140-mRNA-1;Parent=Msa1437140;Name=Msa1437140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=98|1|1|1|1|1|2|483|477
tig0028150 exon 39261 39538 39261 ID=Msa1437140-mRNA-1:exon:10484;Parent=Msa1437140-mRNA-1
tig0028150 exon 40804 42540 40804 ID=Msa1437140-mRNA-1:exon:10485;Parent=Msa1437140-mRNA-1
tig0028150 five_prime_UTR 39261 39358 39261 ID=Msa1437140-mRNA-1:five_prime_utr;Parent=Msa1437140-mRNA-1
tig0028150 CDS 39359 39538 39359 ID=Msa1437140-mRNA-1:cds;Parent=Msa1437140-mRNA-1
tig0028150 CDS 40804 42057 40804 ID=Msa1437140-mRNA-1:cds;Parent=Msa1437140-mRNA-1
tig0028150 three_prime_UTR 42058 42540 42058 ID=Msa1437140-mRNA-1:three_prime_utr;Parent=Msa1437140-mRNA-1
Gene Sequence

>Msa1437140

ATGTTGGAGACAAAAGACTCTGCGATCAAACTGTTTGGAAAAACAATTCCAATTTCAGAAATTCATGTTGGAAAAACAATTTCAGAGAGTATTGATGATCATCATCATGATTTTTCTACAAACTCTTCAAATGAGTCTCATAATAATAAAGATGCTTCACAAGAACATGAGATTGAGAAGAACACAACGGGAGAAAAACTGTCGAATAAAAAGAACGAAGATGGATTCCTTGCACAATCAACAGAAGAATTCACTAATCCAGATGCAACTTCTAGAACTGATGAAGAATCTGTTACAGTATCCACCGAAAGGGAGGTTGCTACATTGAAAACTTCAAAGACCGAAGAAGAACAGGACGAGACAAGTAACACACAGGATAAGCACCTCAAAAAACCGGACAAAATAGTTCCTTGTCCTCGTTGTAGTAGCATGGACACGAAGTTCTGCTACTATAATAATTACAATGTCAACCAACCCCGTCATTTCTGCAAGAACTGCCAGAGATATTGGACTGCCGGTGGAACCATGAGAAACGTACCAGTAGGTGCCGGTCGCAGAAAAAACAAGAGCTCTTCAGAAGCGACACTTCAGAATTCTCGGATACACCCTTCCTTGAAATGCAACGGTACAATCCTTACATTTGGATCCAACTCACCTTTATGTGATTCAGTGGCATCTGTTTTGAAACTTGCTGATAAAACAGTGCAAAATTACACAAGAAATGGATATCATAAACATGAAGAACTAAGAATTTGTGTTCCTCATACCAGTGAAGAACAAGGGGAGGATCAATCAAATAAATCGTCGGTTACCTCCACAAAGTCGACGGAAGGTGCAACCACCAATGTATCTCAAGAACAAGCTATGTGGAATGGCCATAGCTTCCCACCACAAGGTGGCTATTTTCCTCATGGAACTCCTTGGCATTTACCATGGAATCCGATGCAAACGAGCTCACTGATTCCACCACCGGCCTTTTGTCCATCAGGATTTTCCATGCCATTCTATCCTGCAACTTATTGGGGTTGTACTATGCCAAGTGCATGGAACATTCCACGGCAAGCACAACCATCATCACCGAATGGTGCAAACCATAACTCTACTACAAACTCTCCAACCTTAGGTAAACATTCAAGGGAGGAAAACATGCTAAAATCAAGCGAAGGAGATGGTAAGAAAGAAATAAGCGAAGAAAAGAGCTTGTGGTTTCCTAAAACTTTGAGGATCGATGACTCAGAGGAAGCAGAAAAAAGCTCTTTCTGGACAACCCTTGGGATTAAAAACAACAACGCTGACTCAGTTCCTCCGCGAAGACTCTTTCAGGCATTCCCTTCAAAGTGCGACGAGAAAAATCACTCGGTACAAGTGTCTTCAGTCTTGCAAGCCAATCCGGCGGCATTGTCTAGGTCGCTTCACTTTCACGAGACTTCATAA
Protein sequence

>Msa1437140

MLETKDSAIKLFGKTIPISEIHVGKTISESIDDHHHDFSTNSSNESHNNKDASQEHEIEKNTTGEKLSNKKNEDGFLAQSTEEFTNPDATSRTDEESVTVSTEREVATLKTSKTEEEQDETSNTQDKHLKKPDKIVPCPRCSSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSEATLQNSRIHPSLKCNGTILTFGSNSPLCDSVASVLKLADKTVQNYTRNGYHKHEELRICVPHTSEEQGEDQSNKSSVTSTKSTEGATTNVSQEQAMWNGHSFPPQGGYFPHGTPWHLPWNPMQTSSLIPPPAFCPSGFSMPFYPATYWGCTMPSAWNIPRQAQPSSPNGANHNSTTNSPTLGKHSREENMLKSSEGDGKKEISEEKSLWFPKTLRIDDSEEAEKSSFWTTLGIKNNNADSVPPRRLFQAFPSKCDEKNHSVQVSSVLQANPAALSRSLHFHETS*