AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1048980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048980 MtrunA17_Chr7g0217681 94.746 571 11 2 21 572 1 571 0.0 1078
Msa1048980 MtrunA17_Chr6g0453421 67.491 566 157 10 21 572 1 553 0.0 676
Msa1048980 MtrunA17_Chr2g0285771 32.597 543 293 16 41 527 22 547 8.08e-72 242
Msa1048980 MtrunA17_Chr2g0285771 26.113 337 196 8 67 367 311 630 3.17e-25 110
Msa1048980 MtrunA17_Chr3g0140741 34.100 478 235 10 47 462 15 474 7.42e-65 224
Msa1048980 MtrunA17_Chr4g0049801 33.333 447 247 11 52 462 4 435 8.08e-61 212
Msa1048980 MtrunA17_Chr4g0049801 28.291 357 177 15 33 332 242 576 3.58e-23 103
Msa1048980 MtrunA17_Chr8g0376551 30.976 594 306 19 33 556 10 569 3.29e-58 205
Msa1048980 MtrunA17_Chr8g0376551 27.796 313 172 10 67 342 313 608 1.38e-24 108
Msa1048980 MtrunA17_Chr4g0002241 30.769 442 236 12 44 467 3 392 2.28e-51 186
Msa1048980 MtrunA17_Chr3g0127051 28.636 440 254 12 69 462 63 488 1.82e-41 159
Msa1048980 MtrunA17_Chr3g0127051 25.000 348 221 8 23 349 293 621 1.74e-17 86.3
Msa1048980 MtrunA17_Chr5g0412061 28.935 432 286 10 59 474 29 455 9.36e-38 147
Msa1048980 MtrunA17_Chr2g0279641 43.605 172 91 3 297 462 329 500 8.26e-33 134
Msa1048980 MtrunA17_Chr2g0279641 25.342 438 240 14 45 456 27 403 3.22e-25 110
Msa1048980 MtrunA17_Chr2g0279641 31.461 178 103 2 66 231 328 498 1.59e-23 105
Msa1048980 MtrunA17_Chr2g0279641 28.492 179 109 4 298 458 47 224 2.17e-12 70.1
Msa1048980 MtrunA17_Chr7g0250921 50.888 169 48 5 361 529 12 145 1.11e-32 124
Msa1048980 MtrunA17_Chr1g0184511 33.140 172 97 3 68 228 164 328 2.00e-19 92.0
Msa1048980 MtrunA17_Chr1g0184511 30.508 177 116 2 294 464 160 335 2.49e-15 79.0
Msa1048980 MtrunA17_Chr7g0274301 22.967 418 238 13 3 349 35 439 2.98e-19 91.3
Msa1048980 MtrunA17_Chr7g0274301 25.281 178 132 1 288 464 104 281 6.62e-16 80.9
Msa1048980 MtrunA17_Chr7g0249721 29.787 188 98 4 68 234 99 273 6.72e-19 87.8
Msa1048980 MtrunA17_Chr7g0249721 30.928 194 121 4 302 486 103 292 1.26e-13 72.0
Msa1048980 MtrunA17_Chr2g0298721 30.729 192 122 2 288 473 59 245 6.29e-18 86.7
Msa1048980 MtrunA17_Chr2g0298721 30.058 173 102 2 68 228 69 234 2.99e-15 78.6
Msa1048980 MtrunA17_Chr4g0071791 31.217 189 119 2 291 473 36 219 2.53e-15 78.6
Msa1048980 MtrunA17_Chr4g0071791 30.570 193 110 4 50 228 26 208 2.65e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048980 AT5G15270.3 58.724 533 192 11 31 551 17 533 0.0 602
Msa1048980 AT5G15270.2 58.733 521 187 11 31 539 17 521 0.0 590
Msa1048980 AT5G15270.1 58.733 521 187 11 31 539 17 521 0.0 590
Msa1048980 AT1G14170.3 50.106 473 179 10 46 495 25 463 1.35e-136 406
Msa1048980 AT1G14170.1 50.330 455 173 8 64 495 14 438 2.26e-135 402
Msa1048980 AT1G14170.2 50.554 451 170 8 68 495 10 430 1.29e-134 399
Msa1048980 AT5G46190.1 34.211 456 239 12 69 474 44 488 1.18e-66 229
Msa1048980 AT5G46190.1 28.296 311 160 8 72 337 320 612 3.61e-24 107
Msa1048980 AT5G46190.4 34.211 456 239 12 69 474 44 488 1.18e-66 229
Msa1048980 AT5G46190.4 28.296 311 160 8 72 337 320 612 3.61e-24 107
Msa1048980 AT5G46190.3 34.211 456 239 12 69 474 44 488 1.18e-66 229
Msa1048980 AT5G46190.3 28.296 311 160 8 72 337 320 612 3.61e-24 107
Msa1048980 AT5G46190.2 34.273 461 240 13 66 474 39 488 4.60e-66 228
Msa1048980 AT5G46190.2 27.667 300 154 8 72 326 320 601 8.43e-22 100
Msa1048980 AT4G18375.3 30.396 556 297 21 43 540 7 530 4.57e-61 211
Msa1048980 AT4G18375.2 30.396 556 297 21 43 540 7 530 2.20e-60 211
Msa1048980 AT4G18375.2 27.515 338 168 13 67 376 310 598 7.16e-23 103
Msa1048980 AT1G51580.1 31.416 452 246 12 56 462 5 437 2.40e-52 189
Msa1048980 AT1G51580.1 25.000 216 143 5 19 230 234 434 5.93e-18 87.8
Msa1048980 AT5G53060.3 29.670 455 248 12 58 464 57 487 2.08e-49 180
Msa1048980 AT5G53060.3 28.205 195 121 6 43 228 296 480 2.96e-14 76.3
Msa1048980 AT5G53060.1 29.670 455 248 12 58 464 57 487 8.01e-49 180
Msa1048980 AT5G53060.1 28.205 195 121 6 43 228 296 480 3.43e-14 76.3
Msa1048980 AT2G22600.1 27.549 461 277 14 46 465 2 446 7.74e-33 134
Msa1048980 AT2G03110.2 42.767 159 58 5 102 234 1 152 8.30e-31 117
Msa1048980 AT2G03110.1 42.767 159 58 5 102 234 1 152 8.30e-31 117
Msa1048980 AT2G03110.3 42.767 159 58 5 102 234 1 152 8.30e-31 117
Msa1048980 AT4G18375.1 34.921 252 125 9 297 540 97 317 1.89e-29 120
Msa1048980 AT4G18375.1 27.515 338 168 13 67 376 97 385 1.02e-23 103
Msa1048980 AT5G64390.1 36.872 179 109 1 288 462 441 619 2.89e-27 117
Msa1048980 AT5G64390.1 29.911 224 136 4 20 231 403 617 7.41e-23 103
Msa1048980 AT5G64390.1 32.597 181 95 4 71 230 49 223 6.68e-21 97.8
Msa1048980 AT5G64390.1 33.152 184 79 6 300 453 48 217 2.54e-14 76.6
Msa1048980 AT5G64390.2 36.872 179 109 1 288 462 441 619 3.44e-27 117
Msa1048980 AT5G64390.2 29.911 224 136 4 20 231 403 617 6.85e-23 103
Msa1048980 AT5G64390.2 32.597 181 95 4 71 230 49 223 7.46e-21 97.4
Msa1048980 AT5G64390.2 33.152 184 79 6 300 453 48 217 2.64e-14 76.6
Msa1048980 AT5G64390.3 36.872 179 109 1 288 462 441 619 3.52e-27 117
Msa1048980 AT5G64390.3 29.911 224 136 4 20 231 403 617 7.60e-23 103
Msa1048980 AT5G64390.3 32.597 181 95 4 71 230 49 223 7.23e-21 97.4
Msa1048980 AT5G64390.3 33.152 184 79 6 300 453 48 217 2.83e-14 76.6
Msa1048980 AT3G04610.3 32.948 173 95 3 68 228 162 325 2.08e-20 95.5
Msa1048980 AT3G04610.3 27.528 178 125 1 291 464 155 332 6.53e-17 84.3
Msa1048980 AT3G04610.4 32.948 173 95 3 68 228 162 325 2.08e-20 95.5
Msa1048980 AT3G04610.4 27.528 178 125 1 291 464 155 332 6.53e-17 84.3
Msa1048980 AT3G04610.2 32.948 173 95 3 68 228 186 349 3.12e-20 95.1
Msa1048980 AT3G04610.2 27.528 178 125 1 291 464 179 356 9.26e-17 84.0
Msa1048980 AT3G04610.1 32.948 173 95 3 68 228 186 349 3.12e-20 95.1
Msa1048980 AT3G04610.1 27.528 178 125 1 291 464 179 356 9.26e-17 84.0
Msa1048980 AT4G26000.1 29.379 177 98 4 68 228 73 238 8.30e-17 84.0
Msa1048980 AT4G26000.1 32.222 180 114 3 291 463 66 244 2.63e-15 79.3
Msa1048980 AT5G09560.1 29.778 225 131 6 315 512 320 544 8.00e-15 78.2
Msa1048980 AT5G09560.1 26.316 209 123 6 36 231 279 469 4.55e-12 69.3
Msa1048980 AT5G04430.1 26.846 298 162 12 48 334 17 269 9.05e-12 67.0
Msa1048980 AT5G04430.2 27.243 301 178 14 48 334 17 290 5.82e-11 64.7

Find 301 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGAATTGGTTGCCTTAT+TGG 0.136643 7_2:+11652384 Msa1048980:CDS
ATGGAACTTGTTCAAGTATT+TGG 0.144742 7_2:+11655570 Msa1048980:three_prime_UTR
TCATGGTGGGGCTCCAATTA+TGG 0.148669 7_2:+11651849 Msa1048980:CDS
CTTTGAGATTCCTTGGATTA+TGG 0.168812 7_2:+11655551 Msa1048980:three_prime_UTR
ACAATTTCTGTTAGAATCTA+TGG 0.177846 7_2:+11654275 Msa1048980:three_prime_UTR
CTCTTTCACTAGCCGGTTAC+TGG 0.187699 7_2:+11652353 Msa1048980:CDS
TTGCTTACTTCTGCAGTTCC+TGG 0.200050 7_2:+11651793 Msa1048980:CDS
ACAATTTCCGTTAGAATCTA+TGG 0.209065 7_2:+11654313 Msa1048980:three_prime_UTR
CAGTTTAGGCAGTAGGCTTC+AGG 0.210067 7_2:-11653515 None:intergenic
CCGTTAGAATCTATGGATAA+TGG 0.220717 7_2:+11654320 Msa1048980:three_prime_UTR
CTGTTAGAATCTATGGATAA+TGG 0.227331 7_2:+11654282 Msa1048980:three_prime_UTR
CAGAAATTGTTTGGGTTGTT+TGG 0.236028 7_2:-11654262 None:intergenic
CTCCGATTGGTGGTGGTTAT+GGG 0.237832 7_2:+11651878 Msa1048980:CDS
GCTCCGATTGGTGGTGGTTA+TGG 0.240110 7_2:+11651877 Msa1048980:CDS
ATCGGAGCCATTCCCATAAT+TGG 0.245633 7_2:-11651862 None:intergenic
TTTGAATAATATAATGATAT+TGG 0.256594 7_2:+11653887 Msa1048980:three_prime_UTR
ATTAGTCTTGCTCTATGTTT+AGG 0.262619 7_2:+11655492 Msa1048980:three_prime_UTR
GGAGTGGTTTCGTCGGTGTT+AGG 0.267122 7_2:-11649100 None:intergenic
AATCAAATTAGGCAGGATTC+TGG 0.274868 7_2:+11652045 Msa1048980:CDS
CTTGGTCGAGGTGGTCCTTA+TGG 0.280832 7_2:+11653012 Msa1048980:CDS
GCTTAGGAAGTAAGGTAAAA+TGG 0.285966 7_2:-11653676 None:intergenic
ATCTGACCACTATCTTATAT+TGG 0.286139 7_2:+11654019 Msa1048980:three_prime_UTR
CATATAAAATGTGTGCATAT+TGG 0.287484 7_2:+11655132 Msa1048980:three_prime_UTR
GTTATTTATCATTGATCAAT+AGG 0.292431 7_2:+11655278 Msa1048980:three_prime_UTR
TTGCTCTATGTTTAGGTTGT+TGG 0.302791 7_2:+11655499 Msa1048980:three_prime_UTR
GCTAACATTGGAGGTGTTAT+AGG 0.305964 7_2:+11652003 Msa1048980:CDS
CAAAATAGTGAGTGTTAAAA+TGG 0.309031 7_2:-11655198 None:intergenic
TTGATCCTCCTTTACCAATA+AGG 0.310702 7_2:-11652398 None:intergenic
TGTTCAAGTATTTGGAGATA+TGG 0.315324 7_2:+11655578 Msa1048980:three_prime_UTR
GAATGCAGTTGGATTTCTTC+AGG 0.316192 7_2:+11655668 Msa1048980:three_prime_UTR
AGATTCTAACAGAAATTGTT+TGG 0.317530 7_2:-11654271 None:intergenic
CGTTAGAATCTATGGATAAT+GGG 0.317951 7_2:+11654321 Msa1048980:three_prime_UTR
TTTGCATCTGGCGACGGTTA+TGG 0.318019 7_2:+11652859 Msa1048980:CDS
CAACCTTGATGCCTCTATCT+AGG 0.320441 7_2:+11653616 Msa1048980:three_prime_UTR
GAGAAAGTTGAAAGAGATTC+TGG 0.321272 7_2:+11652324 Msa1048980:CDS
GGCAGATTGTTCAGAATATA+AGG 0.321391 7_2:+11650605 Msa1048980:CDS
TGAGATTGCTGTTGTGAAAA+AGG 0.325029 7_2:+11651717 Msa1048980:CDS
AAATGGCAACGCTAGCTAAA+TGG 0.327704 7_2:-11655102 None:intergenic
CTTTGTCCGGTTCGCAAAAT+CGG 0.328779 7_2:+11649169 Msa1048980:CDS
ACGGAACGGACTAGTACTTC+TGG 0.328930 7_2:+11653054 Msa1048980:CDS
TGCTTACTTCTGCAGTTCCT+GGG 0.334858 7_2:+11651794 Msa1048980:CDS
TGCAAAATATTGTGAAATAA+TGG 0.336117 7_2:+11654503 Msa1048980:three_prime_UTR
TTGAAACCATCTGGTCCTTC+TGG 0.338732 7_2:-11652760 None:intergenic
CGCAAAATCGGCAGCATCAT+TGG 0.340343 7_2:+11649181 Msa1048980:CDS
TGTTAGAATCTATGGATAAT+GGG 0.347034 7_2:+11654283 Msa1048980:three_prime_UTR
TAAGAGATTGAGGGCCTGTT+TGG 0.348985 7_2:+11654828 Msa1048980:three_prime_UTR
GGTGGTCCTTATGGAGCTTA+TGG 0.351103 7_2:+11653021 Msa1048980:CDS
GAACTCTGACGAGCTTGTTC+AGG 0.352751 7_2:+11650687 Msa1048980:CDS
TCGTTGGTGTTTAGTTTGAA+TGG 0.355963 7_2:+11654133 Msa1048980:three_prime_UTR
TAAGATTACAAAAGGTCATT+TGG 0.356080 7_2:+11655724 Msa1048980:three_prime_UTR
CATGCCACTTTGAGATTCCT+TGG 0.358513 7_2:+11655544 Msa1048980:three_prime_UTR
TTAGTTTGAATGGGCTAGTC+TGG 0.362522 7_2:+11654143 Msa1048980:three_prime_UTR
CTATCCACGGTCCATGTATC+CGG 0.368979 7_2:+11651924 Msa1048980:CDS
CTGAAGCCTACTGCCTAAAC+TGG 0.371136 7_2:+11653516 Msa1048980:three_prime_UTR
TTCAATAGTCTCCACATGTT+TGG 0.377132 7_2:-11653642 None:intergenic
CAATGGTGGGTTCTCATGGT+GGG 0.382167 7_2:+11651836 Msa1048980:CDS
TAGGGAGATCCTCCTTAGAT+AGG 0.383114 7_2:-11652464 None:intergenic
TAACATCCGCATCCTATCTA+AGG 0.386726 7_2:+11652452 Msa1048980:CDS
CATGGTGGGGCTCCAATTAT+GGG 0.388437 7_2:+11651850 Msa1048980:CDS
GTGGTATAATAAATCAAATT+AGG 0.394131 7_2:+11652034 Msa1048980:CDS
CCGATTGGTGGTGGTTATGG+GGG 0.395303 7_2:+11651880 Msa1048980:CDS
ATCAAATTAGGCAGGATTCT+GGG 0.396448 7_2:+11652046 Msa1048980:CDS
GGCTTAGCCACATCTAGTTA+AGG 0.398310 7_2:+11654758 Msa1048980:three_prime_UTR
CGGACAAAGGTAACGGTAAA+CGG 0.401582 7_2:-11649155 None:intergenic
TGAAGATGAAGATGTTGATA+TGG 0.404532 7_2:+11649420 Msa1048980:CDS
GTATGCGGCCGGTGGTTCAA+TGG 0.406315 7_2:+11651819 Msa1048980:CDS
TCCGATTGGTGGTGGTTATG+GGG 0.406534 7_2:+11651879 Msa1048980:CDS
CCCAGTGACTGACAAATTCA+TGG 0.406816 7_2:+11653592 Msa1048980:three_prime_UTR
AGGGTTACGGCGTTTGTTGT+TGG 0.407039 7_2:-11649080 None:intergenic
TGACTGCTTAATAGCCATTT+CGG 0.407826 7_2:+11652107 Msa1048980:CDS
TCATAAACTCAGGGTCCGTT+TGG 0.409486 7_2:-11655050 None:intergenic
CGAATTGGTGAAACTGTTCC+TGG 0.409684 7_2:+11649256 Msa1048980:CDS
CAGGAACAGTTTCACCAATT+CGG 0.411698 7_2:-11649255 None:intergenic
AAAATTGTATATTCATAAGT+TGG 0.414004 7_2:+11654932 Msa1048980:three_prime_UTR
CGTTGGTGTTTAGTTTGAAT+GGG 0.415931 7_2:+11654134 Msa1048980:three_prime_UTR
TGCATATTGGATTGTCCTCT+AGG 0.416941 7_2:+11655145 Msa1048980:three_prime_UTR
GCTATTTAAAACAACTGCTC+TGG 0.418782 7_2:-11654411 None:intergenic
GAGTGGTTTCGTCGGTGTTA+GGG 0.420306 7_2:-11649099 None:intergenic
ATATTTCATCATTCGATCAC+TGG 0.420864 7_2:+11655245 Msa1048980:three_prime_UTR
TGCGCAGATTAGGATTCTTA+AGG 0.421502 7_2:+11650639 Msa1048980:CDS
GGCGACGGTTATGGAAACTA+TGG 0.421841 7_2:+11652868 Msa1048980:CDS
TTCTACCTCTCTCGCCGAAA+TGG 0.422570 7_2:-11652121 None:intergenic
CTGCTATGGATGCGCTTGTC+AGG 0.423616 7_2:+11649359 Msa1048980:CDS
GTGAGACTGGTGCGCAGATT+AGG 0.423919 7_2:+11650629 Msa1048980:CDS
GCCATGAATTTGTCAGTCAC+TGG 0.424683 7_2:-11653593 None:intergenic
TTTCGTCGGTGTTAGGGTTA+CGG 0.427146 7_2:-11649093 None:intergenic
GATCAGATTGGGTGTGTGAT+TGG 0.428636 7_2:+11650574 Msa1048980:intron
GCTTAGCCACATCTAGTTAA+GGG 0.430969 7_2:+11654759 Msa1048980:three_prime_UTR
AACCATGGTTACTAAAACCT+TGG 0.433601 7_2:+11653290 Msa1048980:exon
TATAACCAGAGGAGCCGAAC+TGG 0.439048 7_2:-11654080 None:intergenic
GGGTGTGTGATTGGGAAAGG+TGG 0.439775 7_2:+11650583 Msa1048980:CDS
TCTGGTCCTTCTGGCGAAGC+AGG 0.442517 7_2:-11652751 None:intergenic
GATTCTAACAGAAATTGTTT+GGG 0.442973 7_2:-11654270 None:intergenic
CAATGTTCATTGAATGCAGT+TGG 0.445821 7_2:+11655657 Msa1048980:three_prime_UTR
TTCAACTTTCTCACTGCACC+GGG 0.446932 7_2:-11652313 None:intergenic
TATTATTTATAAATTTGTTA+AGG 0.449726 7_2:-11654969 None:intergenic
TCGCTGAATCTTCAGATCTC+TGG 0.449818 7_2:+11651694 Msa1048980:intron
ATCCCTTGAGCCCGGATACA+TGG 0.451086 7_2:-11651935 None:intergenic
AACCTTGATGCCTCTATCTA+GGG 0.451615 7_2:+11653617 Msa1048980:three_prime_UTR
TACTTGCACAAGAGCGTCCT+TGG 0.454929 7_2:-11652650 None:intergenic
CGTCTTCCAGTTTAGGCAGT+AGG 0.458624 7_2:-11653522 None:intergenic
CCTTCATAGTTGAAACCATC+TGG 0.458835 7_2:-11652769 None:intergenic
TATTCTTATTCTGATGGCTA+TGG 0.459228 7_2:+11652823 Msa1048980:CDS
AAAACAAGCTTAATCCAAAC+AGG 0.461819 7_2:-11654842 None:intergenic
TGAGTTTATGTGTCCTGCTA+TGG 0.469447 7_2:+11649345 Msa1048980:CDS
AGTTTAGGCAGTAGGCTTCA+GGG 0.470110 7_2:-11653514 None:intergenic
ACGAAGGCGAAGATCCGAAT+TGG 0.470439 7_2:+11649241 Msa1048980:CDS
GTATTCTCTCTTTCACTAGC+CGG 0.470671 7_2:+11652346 Msa1048980:CDS
AACAAGCATGGATTGGAAGT+TGG 0.471105 7_2:-11654703 None:intergenic
AAATATCAAGGTTGATAGTT+CGG 0.471588 7_2:+11652071 Msa1048980:CDS
GTTCGCAAGCTTAGGAAGTA+AGG 0.474273 7_2:-11653684 None:intergenic
TATGGTAAATAGTTGAGATT+CGG 0.474547 7_2:+11655596 Msa1048980:three_prime_UTR
GGTTCAATGGTGGGTTCTCA+TGG 0.474828 7_2:+11651832 Msa1048980:CDS
CATTGGAGGTGTTATAGGTA+AGG 0.479056 7_2:+11652008 Msa1048980:CDS
CGGAACGGACTAGTACTTCT+GGG 0.479809 7_2:+11653055 Msa1048980:CDS
TGCAACTGAAGATGATGAAA+TGG 0.481672 7_2:+11652491 Msa1048980:CDS
TTCATCTCGTCTTCCAGTTT+AGG 0.485689 7_2:-11653529 None:intergenic
ATTTAACGCACAAGACTGTA+AGG 0.488292 7_2:-11653925 None:intergenic
TCAAAGCGCAAAGCGGCAGC+CGG 0.488898 7_2:-11650666 None:intergenic
TGAATACAAGATTGGTTCGT+TGG 0.490609 7_2:+11654117 Msa1048980:three_prime_UTR
TGTGTTTATGCAGTTCTTTG+AGG 0.490670 7_2:+11652248 Msa1048980:intron
ATTGGTTGCCTTATTGGTAA+AGG 0.491056 7_2:+11652390 Msa1048980:CDS
TTTCAACTTTCTCACTGCAC+CGG 0.491500 7_2:-11652314 None:intergenic
AGATAGTACAGGTATACAAC+TGG 0.491875 7_2:-11653807 None:intergenic
TGCGGCCGGTGGTTCAATGG+TGG 0.491994 7_2:+11651822 Msa1048980:CDS
CTGGTGTCAAGCTCTCGAAT+TGG 0.492427 7_2:+11652372 Msa1048980:CDS
TTCTCACGATTCACAATGGC+TGG 0.492615 7_2:+11648995 Msa1048980:CDS
GAGAGCTTGACACCAGTAAC+CGG 0.492678 7_2:-11652365 None:intergenic
GTTCCTGGGGTGTATGCGGC+CGG 0.498146 7_2:+11651808 Msa1048980:CDS
GAGCACATGTTCGCAAGCTT+AGG 0.498749 7_2:-11653692 None:intergenic
CTTGTATATGTAAGAGATTG+AGG 0.500205 7_2:+11654818 Msa1048980:three_prime_UTR
TCTTATTCTGATGGCTATGG+AGG 0.500846 7_2:+11652826 Msa1048980:CDS
TTGTGATGAGCGTGTTGTTA+CGG 0.501109 7_2:+11649279 Msa1048980:CDS
ATCAGATTGGGTGTGTGATT+GGG 0.501919 7_2:+11650575 Msa1048980:intron
CGTTTACCGTTACCTTTGTC+CGG 0.503615 7_2:+11649156 Msa1048980:CDS
TATAAGTACAAGAGGTTATG+AGG 0.504979 7_2:+11655454 Msa1048980:three_prime_UTR
GACAGGTAATCTATTAGATT+AGG 0.505592 7_2:+11655696 Msa1048980:three_prime_UTR
GTTATGTGAAATGTGTCTCT+TGG 0.508075 7_2:-11649121 None:intergenic
CTCAATCTCTTACATATACA+AGG 0.508204 7_2:-11654817 None:intergenic
GATTTCTTCAGGAATGAGAC+AGG 0.508273 7_2:+11655679 Msa1048980:three_prime_UTR
TATGAAACTAAACACCGAAC+TGG 0.508579 7_2:+11654641 Msa1048980:three_prime_UTR
TCAATGGTGGGTTCTCATGG+TGG 0.510611 7_2:+11651835 Msa1048980:CDS
TGGCTGTACAGTCTTAGCTC+TGG 0.512096 7_2:-11654607 None:intergenic
AGATTGTCCGACAGATTGTC+TGG 0.513148 7_2:+11653248 Msa1048980:CDS
CAAGACTAATATCCAACAGT+TGG 0.514667 7_2:-11655479 None:intergenic
CACAGCTGCTTCAATTGTTG+CGG 0.514880 7_2:-11652280 None:intergenic
GAATGGACTGAATACAAGAT+TGG 0.515824 7_2:+11654109 Msa1048980:three_prime_UTR
ATGTTTGGTCCCCTAGATAG+AGG 0.517490 7_2:-11653627 None:intergenic
GATTGTCTGGTGGTGTATCT+CGG 0.518577 7_2:+11653261 Msa1048980:CDS
TATAATAAATCAAATTAGGC+AGG 0.519067 7_2:+11652038 Msa1048980:CDS
TAGCAGTTGGACAAACAAAT+CGG 0.520156 7_2:-11651984 None:intergenic
AATCGGACTGAAAACTCCTT+CGG 0.520230 7_2:-11651967 None:intergenic
GCAGGAAGATATGCAAGTAC+TGG 0.523882 7_2:-11652733 None:intergenic
AAACCTTGGTGGGTCCCTGC+AGG 0.524068 7_2:+11653304 Msa1048980:exon
CCAGATGGTTTCAACTATGA+AGG 0.524623 7_2:+11652769 Msa1048980:CDS
ATCGGCAGCATCATTGGCCG+CGG 0.525073 7_2:+11649187 Msa1048980:CDS
CATATGCGGCAGCTTGGTCG+AGG 0.527118 7_2:+11653000 Msa1048980:intron
GCGGCCGGTGGTTCAATGGT+GGG 0.527583 7_2:+11651823 Msa1048980:CDS
AACTATACACCACACCAGTT+CGG 0.527690 7_2:-11654655 None:intergenic
GGTGGCTATTCTTATTCTGA+TGG 0.527717 7_2:+11652817 Msa1048980:CDS
CTCTACACAACAATGCTGTA+AGG 0.527950 7_2:-11654535 None:intergenic
TTGTATATGTAAGAGATTGA+GGG 0.528732 7_2:+11654819 Msa1048980:three_prime_UTR
ATGGGAATGGCTCCGATTGG+TGG 0.530538 7_2:+11651868 Msa1048980:CDS
TATCTTCCTGCTTCGCCAGA+AGG 0.531028 7_2:+11652745 Msa1048980:CDS
TTAGGATTCTTAAGGATGAC+CGG 0.532010 7_2:+11650647 Msa1048980:CDS
CAGAATGGTGCTGTTTAACA+TGG 0.532916 7_2:-11655385 None:intergenic
GCAAAACCAATATAAGATAG+TGG 0.533028 7_2:-11654025 None:intergenic
TATTTCATCATTCGATCACT+GGG 0.537759 7_2:+11655246 Msa1048980:three_prime_UTR
CTCTGGTTATATGAGCTGAA+TGG 0.538675 7_2:+11654092 Msa1048980:three_prime_UTR
TAACTTCCATAAGCTCCATA+AGG 0.538976 7_2:-11653027 None:intergenic
GTTTGTCCAACTGCTAACAT+TGG 0.542273 7_2:+11651991 Msa1048980:CDS
TAAATTTGAAAGACCTTGTG+TGG 0.543201 7_2:+11653943 Msa1048980:three_prime_UTR
GGCAGCATCATTGGCCGCGG+CGG 0.543522 7_2:+11649190 Msa1048980:CDS
GGTGTGTGATTGGGAAAGGT+GGG 0.544155 7_2:+11650584 Msa1048980:CDS
GGATTCTGGGGCAAATATCA+AGG 0.544315 7_2:+11652059 Msa1048980:CDS
TATCCACGGTCCATGTATCC+GGG 0.544857 7_2:+11651925 Msa1048980:CDS
TGTTTAACATGGCATTTATG+TGG 0.545748 7_2:-11655374 None:intergenic
CATCATTCGATCACTGGGAA+AGG 0.546009 7_2:+11655251 Msa1048980:three_prime_UTR
ATTGGGTGTGTGATTGGGAA+AGG 0.547162 7_2:+11650580 Msa1048980:CDS
CCATGAATTTGTCAGTCACT+GGG 0.547663 7_2:-11653592 None:intergenic
AAGACTAATATCCAACAGTT+GGG 0.549472 7_2:-11655478 None:intergenic
TATCCGGGCTCAAGGGATGA+AGG 0.550864 7_2:+11651940 Msa1048980:CDS
TTCAACTATGAAGGTAGAGA+TGG 0.552487 7_2:+11652778 Msa1048980:CDS
TTGATTTATATAAATTGTGA+AGG 0.552775 7_2:+11654351 Msa1048980:three_prime_UTR
GTGAAATGTGTCTCTTGGAG+TGG 0.554448 7_2:-11649116 None:intergenic
CTGACAAGCGCATCCATAGC+AGG 0.554642 7_2:-11649358 None:intergenic
CAGAATATAAGGAGTGAGAC+TGG 0.554815 7_2:+11650616 Msa1048980:CDS
GCATATTGGATTGTCCTCTA+GGG 0.556453 7_2:+11655146 Msa1048980:three_prime_UTR
GTCTCTTGGAGTGGTTTCGT+CGG 0.557133 7_2:-11649107 None:intergenic
TGAAGATGTTGATATGGAGA+AGG 0.558240 7_2:+11649426 Msa1048980:CDS
TCTACCTTTGAGGTCTAGCA+CGG 0.558308 7_2:+11654737 Msa1048980:three_prime_UTR
AATGGTGGGTTCTCATGGTG+GGG 0.558992 7_2:+11651837 Msa1048980:CDS
GTTTAGTTTCATAGCCGTCC+AGG 0.558996 7_2:-11654631 None:intergenic
GAACCTTCATCCCTTGAGCC+CGG 0.559965 7_2:-11651943 None:intergenic
GGTTGCCTTATTGGTAAAGG+AGG 0.560805 7_2:+11652393 Msa1048980:CDS
TCAAATTAGGCAGGATTCTG+GGG 0.561605 7_2:+11652047 Msa1048980:CDS
GGAATGGCTCCGATTGGTGG+TGG 0.561692 7_2:+11651871 Msa1048980:CDS
TGGAAACTATGGAAGTTCAC+AGG 0.562268 7_2:+11652879 Msa1048980:CDS
GCTTACTTCTGCAGTTCCTG+GGG 0.562545 7_2:+11651795 Msa1048980:CDS
CATGGTTACTAAAACCTTGG+TGG 0.562818 7_2:+11653293 Msa1048980:exon
ATTTGTCAGTCACTGGGTAG+AGG 0.566631 7_2:-11653586 None:intergenic
GACTGTACAGCCATCCTGGA+CGG 0.569437 7_2:+11654617 Msa1048980:three_prime_UTR
CGACAAAACAAAGATAGTAC+AGG 0.570158 7_2:-11653818 None:intergenic
GGTTATGAGGACCCAACTGT+TGG 0.571493 7_2:+11655467 Msa1048980:three_prime_UTR
GTCCATGTATCCGGGCTCAA+GGG 0.574091 7_2:+11651933 Msa1048980:CDS
ACACCTCCAATGTTAGCAGT+TGG 0.575469 7_2:-11651997 None:intergenic
AGAACCCACCATTGAACCAC+CGG 0.576052 7_2:-11651827 None:intergenic
CTCTTGTGCAAGTACTTACC+CGG 0.576314 7_2:+11652659 Msa1048980:CDS
AATAGCCATTTCGGCGAGAG+AGG 0.578458 7_2:+11652116 Msa1048980:CDS
AAAGGCTCTGATTCAAGTTG+CGG 0.579758 7_2:+11651735 Msa1048980:CDS
TGTCCAACTGCTAACATTGG+AGG 0.579765 7_2:+11651994 Msa1048980:CDS
TCCCCTAGATAGAGGCATCA+AGG 0.580833 7_2:-11653619 None:intergenic
TACAGGTATACAACTGGCAA+AGG 0.581153 7_2:-11653801 None:intergenic
ACATGTCACATCATAAACTC+AGG 0.582005 7_2:-11655060 None:intergenic
TCAATGAACATTGCAGACCA+AGG 0.582036 7_2:-11655647 None:intergenic
CAATGAACATTGCAGACCAA+GGG 0.582325 7_2:-11655646 None:intergenic
CTGGGTAGAGGCGTCAAGGT+GGG 0.583814 7_2:-11653574 None:intergenic
GTCACTGGGTAGAGGCGTCA+AGG 0.585145 7_2:-11653578 None:intergenic
GGTGTTATAGGTAAGGGCGG+TGG 0.586093 7_2:+11652015 Msa1048980:CDS
CTTACAGCATTGTTGTGTAG+AGG 0.586603 7_2:+11654536 Msa1048980:three_prime_UTR
CTCTGATTCAAGTTGCGGCA+CGG 0.586705 7_2:+11651740 Msa1048980:CDS
CAATCATTACTGAGATGAGA+AGG 0.587009 7_2:+11652418 Msa1048980:CDS
CTAGATAGAGGCATCAAGGT+TGG 0.587204 7_2:-11653615 None:intergenic
ATAATCAATTAATCACAGAA+TGG 0.587487 7_2:-11655400 None:intergenic
TTCGATCACTGGGAAAGGCT+AGG 0.587738 7_2:+11655256 Msa1048980:three_prime_UTR
TGGGGCTCCAATTATGGGAA+TGG 0.589051 7_2:+11651855 Msa1048980:CDS
TGCAGTTCCTGGGGTGTATG+CGG 0.590287 7_2:+11651804 Msa1048980:CDS
CCTGGGGTGTATGCGGCCGG+TGG 0.591168 7_2:+11651811 Msa1048980:CDS
ATTGGAGGTGTTATAGGTAA+GGG 0.591478 7_2:+11652009 Msa1048980:CDS
GGAAGATATGCAAGTACTGG+TGG 0.592745 7_2:-11652730 None:intergenic
GTTGATAGTTCGGCAACTGA+AGG 0.592881 7_2:+11652081 Msa1048980:CDS
ATGGTTACTAAAACCTTGGT+GGG 0.595179 7_2:+11653294 Msa1048980:exon
AGCAAATGTTGAGTACGTGA+AGG 0.595406 7_2:-11651775 None:intergenic
GTTAGTCGTATAAGTACAAG+AGG 0.595664 7_2:+11655446 Msa1048980:three_prime_UTR
ATCTGTCGTCGATCTACTGT+AGG 0.596009 7_2:+11654786 Msa1048980:three_prime_UTR
ACGTGTTCAGAAGACAGATA+AGG 0.596941 7_2:-11655425 None:intergenic
ATGCAACCCTTAACTAGATG+TGG 0.598895 7_2:-11654765 None:intergenic
GGTAGAGATGGAAGACGACA+TGG 0.599304 7_2:+11652790 Msa1048980:CDS
AGCTTATGGAAGTTATGCTA+CGG 0.600781 7_2:+11653035 Msa1048980:CDS
TTATCATTGATCAATAGGAA+AGG 0.601346 7_2:+11655283 Msa1048980:three_prime_UTR
GCTTGTCAGGATTCATCAGA+AGG 0.601873 7_2:+11649372 Msa1048980:CDS
TGAAGATGATGAAATGGTGC+AGG 0.602115 7_2:+11652497 Msa1048980:CDS
TGGATCAGTGTTGTCAATTG+CGG 0.602560 7_2:-11654587 None:intergenic
GATCCTCCTTAGATAGGATG+CGG 0.604218 7_2:-11652458 None:intergenic
TGAACAAGTTCCATAATCCA+AGG 0.604569 7_2:-11655561 None:intergenic
ATGCGGCAGCTTGGTCGAGG+TGG 0.604698 7_2:+11653003 Msa1048980:intron
ATTGATCAATAGGAAAGGCT+AGG 0.605002 7_2:+11655288 Msa1048980:three_prime_UTR
ACATTGCAGACCAAGGGGAG+AGG 0.605920 7_2:-11655640 None:intergenic
CGATTGGTGGTGGTTATGGG+GGG 0.606850 7_2:+11651881 Msa1048980:CDS
ACAAGAGTGATTTGTCCGCT+AGG 0.608543 7_2:-11654461 None:intergenic
ATTATGGGAATGGCTCCGAT+TGG 0.609678 7_2:+11651865 Msa1048980:CDS
CCATTATCCATAGATTCTAA+CGG 0.610541 7_2:-11654320 None:intergenic
AGTTTCATAGCCGTCCAGGA+TGG 0.612437 7_2:-11654627 None:intergenic
CATCCGCATCCTATCTAAGG+AGG 0.616844 7_2:+11652455 Msa1048980:CDS
AAGGGATGAAGGTTCTCCGA+AGG 0.622494 7_2:+11651951 Msa1048980:CDS
GATGGAAGACGACATGGACG+TGG 0.622802 7_2:+11652796 Msa1048980:CDS
TGCGAACCGGACAAAGGTAA+CGG 0.624302 7_2:-11649162 None:intergenic
GCTGGTCAAAGAACATCCTA+CGG 0.624883 7_2:+11649013 Msa1048980:CDS
TATCTAGGGGACCAAACATG+TGG 0.625382 7_2:+11653631 Msa1048980:three_prime_UTR
GCAAATGTTGAGTACGTGAA+GGG 0.628954 7_2:-11651774 None:intergenic
GCTTCGCCAGAAGGACCAGA+TGG 0.629484 7_2:+11652754 Msa1048980:CDS
GTGTGAACGTTTGTTGCCGT+AGG 0.637858 7_2:-11649029 None:intergenic
TAAGCCGTGCTAGACCTCAA+AGG 0.638003 7_2:-11654741 None:intergenic
TCATCAGAAGGTGATTGCTG+AGG 0.638299 7_2:+11649384 Msa1048980:CDS
GCAAGTAACTATGAACTACC+AGG 0.638924 7_2:-11653847 None:intergenic
ATTAAATGAACTAGCCCTAG+AGG 0.639234 7_2:-11655160 None:intergenic
ATTGCTGAGGATTTGCGTGG+TGG 0.640532 7_2:+11649397 Msa1048980:CDS
GCAGTGAGTTTGTCAAACCA+TGG 0.642376 7_2:-11653552 None:intergenic
GAAGCTAAAATCTACCTGCA+GGG 0.642778 7_2:-11653318 None:intergenic
ACTGCAATACAGACCACACA+AGG 0.647395 7_2:-11653956 None:intergenic
GTGTTGTCAATTGCGGATAG+CGG 0.651012 7_2:-11654580 None:intergenic
ACAACACGCTCATCACAACC+AGG 0.651674 7_2:-11649274 None:intergenic
GGAAGACGACATGGACGTGG+TGG 0.651683 7_2:+11652799 Msa1048980:CDS
TTTAGATCTAAAACACCATG+TGG 0.652874 7_2:+11653771 Msa1048980:three_prime_UTR
ACCTTGATGCCTCTATCTAG+GGG 0.653496 7_2:+11653618 Msa1048980:three_prime_UTR
CTACCTGCAGGGACCCACCA+AGG 0.655648 7_2:-11653307 None:intergenic
CTGGAAGACGAGATGAACCA+TGG 0.661796 7_2:+11653535 Msa1048980:three_prime_UTR
GAAGTAAGGTAAAATGGACA+TGG 0.661826 7_2:-11653670 None:intergenic
ACAACTCCGTCTTGATACGA+AGG 0.662897 7_2:+11649225 Msa1048980:CDS
ACAATTCTCACGATTCACAA+TGG 0.666780 7_2:+11648991 Msa1048980:CDS
ACTGGGTAGAGGCGTCAAGG+TGG 0.670676 7_2:-11653575 None:intergenic
TACACCACCAGACAATCTGT+CGG 0.671440 7_2:-11653255 None:intergenic
AACTAAACACCGAACTGGTG+TGG 0.672580 7_2:+11654646 Msa1048980:three_prime_UTR
TAATCCAAGGAATCTCAAAG+TGG 0.676593 7_2:-11655548 None:intergenic
CATTCAGCTCATATAACCAG+AGG 0.678713 7_2:-11654091 None:intergenic
GTGATTGCTGAGGATTTGCG+TGG 0.679408 7_2:+11649394 Msa1048980:CDS
GTTTCACGATCTCGCCGCCG+CGG 0.681169 7_2:-11649204 None:intergenic
AATGAACATTGCAGACCAAG+GGG 0.681914 7_2:-11655645 None:intergenic
TCTTCGCCTTCGTATCAAGA+CGG 0.682357 7_2:-11649231 None:intergenic
CATGTCACATCATAAACTCA+GGG 0.685338 7_2:-11655059 None:intergenic
ATGGAAGTTATGCTACGGAA+CGG 0.690137 7_2:+11653040 Msa1048980:CDS
GGCAAAGGAACATATCCACA+TGG 0.696425 7_2:-11653786 None:intergenic
TCAACTTTCTCACTGCACCG+GGG 0.700169 7_2:-11652312 None:intergenic
TCAGAGTTCAAAGCGCAAAG+CGG 0.710111 7_2:-11650673 None:intergenic
GGAGGTGTTATAGGTAAGGG+CGG 0.712082 7_2:+11652012 Msa1048980:CDS
GTATCTCGGAGGAGAAACCA+TGG 0.714795 7_2:+11653275 Msa1048980:CDS
TTGTCCGACAGATTGTCTGG+TGG 0.724794 7_2:+11653251 Msa1048980:CDS
GTGATGTTGGAGACTATCCA+CGG 0.725781 7_2:+11651911 Msa1048980:CDS
TGTCTGGTGGTGTATCTCGG+AGG 0.726292 7_2:+11653264 Msa1048980:CDS
GAGCCCGGATACATGGACCG+TGG 0.743404 7_2:-11651928 None:intergenic
GCAATAGCGCTATTGCCTAG+CGG 0.755960 7_2:+11654446 Msa1048980:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAAAAATTTAATTTT+TGG + chr7_2:11649461-11649480 Msa1048980:intron 0.0%
!! AAAGAATATGATATAATATT+TGG + chr7_2:11649690-11649709 Msa1048980:intron 10.0%
!! TTTGAATAATATAATGATAT+TGG + chr7_2:11653887-11653906 Msa1048980:three_prime_UTR 10.0%
!!! ATGTATCTAAAGTATATTAT+AGG - chr7_2:11650356-11650375 None:intergenic 15.0%
!! ATAAAAAAAAATCACTTGTT+AGG - chr7_2:11650394-11650413 None:intergenic 15.0%
!!! AATCTAATGTTTTCAAATAA+CGG + chr7_2:11651042-11651061 Msa1048980:intron 15.0%
!! TTTAATTATTGTTTCATATG+CGG + chr7_2:11652986-11653005 Msa1048980:intron 15.0%
!! TTGATTTATATAAATTGTGA+AGG + chr7_2:11654351-11654370 Msa1048980:three_prime_UTR 15.0%
!! AAAATTGTATATTCATAAGT+TGG + chr7_2:11654932-11654951 Msa1048980:three_prime_UTR 15.0%
!!! TAATTGTATTGTATGTTTTT+AGG + chr7_2:11655343-11655362 Msa1048980:three_prime_UTR 15.0%
!!! TATTTTATGAGTTATGCTTT+TGG + chr7_2:11649565-11649584 Msa1048980:intron 20.0%
!!! ATTTTATGAGTTATGCTTTT+GGG + chr7_2:11649566-11649585 Msa1048980:intron 20.0%
!!! GTTTTTTTTGCTTATAATAG+TGG - chr7_2:11649988-11650007 None:intergenic 20.0%
!!! TTATTCAATGACTCTAAAAA+TGG - chr7_2:11650320-11650339 None:intergenic 20.0%
!! AAAATATCAGAAAGAGATTA+GGG - chr7_2:11650489-11650508 None:intergenic 20.0%
!! AAAATAACTTATAGCTTACA+TGG - chr7_2:11650972-11650991 None:intergenic 20.0%
!! GTGGTATAATAAATCAAATT+AGG + chr7_2:11652034-11652053 Msa1048980:CDS 20.0%
!! TATAATAAATCAAATTAGGC+AGG + chr7_2:11652038-11652057 Msa1048980:CDS 20.0%
!!! AATCAATTTGTTTTGTCATA+TGG + chr7_2:11652172-11652191 Msa1048980:intron 20.0%
!!! ATCAATTTGTTTTGTCATAT+GGG + chr7_2:11652173-11652192 Msa1048980:intron 20.0%
!! ATAAACTACAAAATAAATCG+AGG - chr7_2:11653343-11653362 None:intergenic 20.0%
!!! TTAAGGAAAGCTATTTTTAT+AGG - chr7_2:11653725-11653744 None:intergenic 20.0%
!! AATAAAAAAAGCAGTCATTA+AGG - chr7_2:11653742-11653761 None:intergenic 20.0%
!! TGCAAAATATTGTGAAATAA+TGG + chr7_2:11654503-11654522 Msa1048980:three_prime_UTR 20.0%
!!! TTTTCTAGTACATTTCTAAT+GGG + chr7_2:11654676-11654695 Msa1048980:three_prime_UTR 20.0%
!! TAAAAATAAGCTAATCCAAA+CGG + chr7_2:11655035-11655054 Msa1048980:three_prime_UTR 20.0%
!!! ATTTTATATGGGAAGTAAAA+TGG - chr7_2:11655122-11655141 None:intergenic 20.0%
!!! AATATGCACACATTTTATAT+GGG - chr7_2:11655133-11655152 None:intergenic 20.0%
!! GTTATTTATCATTGATCAAT+AGG + chr7_2:11655278-11655297 Msa1048980:three_prime_UTR 20.0%
!! ATAATCAATTAATCACAGAA+TGG - chr7_2:11655403-11655422 None:intergenic 20.0%
!! TTTTGTGAATTGTGAGTTTA+GGG - chr7_2:11648970-11648989 None:intergenic 25.0%
! AATATTTGGTATTATCGAGT+CGG + chr7_2:11649704-11649723 Msa1048980:intron 25.0%
!!! TGGTTTTTTGCTTATAATAG+TGG - chr7_2:11650300-11650319 None:intergenic 25.0%
! TTTATTATAATAGTGACCAG+AGG + chr7_2:11650409-11650428 Msa1048980:intron 25.0%
! TTATTATAATAGTGACCAGA+GGG + chr7_2:11650410-11650429 Msa1048980:intron 25.0%
! CAAAATATCAGAAAGAGATT+AGG - chr7_2:11650490-11650509 None:intergenic 25.0%
!! TTGTGATGAACCTTTTTAAT+TGG + chr7_2:11650721-11650740 Msa1048980:intron 25.0%
!!! TGTGATGAACCTTTTTAATT+GGG + chr7_2:11650722-11650741 Msa1048980:intron 25.0%
!! ATTAAGTTGTTTATCCAAAG+TGG - chr7_2:11650847-11650866 None:intergenic 25.0%
! ATAGCAAAGTAGAATTTGAA+TGG + chr7_2:11651205-11651224 Msa1048980:intron 25.0%
! ACATACAACAATTTCTCATT+CGG - chr7_2:11651663-11651682 None:intergenic 25.0%
!!! AAATATCAAGGTTGATAGTT+CGG + chr7_2:11652071-11652090 Msa1048980:CDS 25.0%
! AAATAGTAGTTCAGAATCAT+CGG - chr7_2:11652585-11652604 None:intergenic 25.0%
!! TTCTCAATGCTTTTAGATTT+CGG + chr7_2:11652612-11652631 Msa1048980:intron 25.0%
! AGAACGTAAAATAAATGGTT+TGG - chr7_2:11653084-11653103 None:intergenic 25.0%
! ACGTTAGAACGTAAAATAAA+TGG - chr7_2:11653089-11653108 None:intergenic 25.0%
! ACATGTATAGAGAAGAATAT+GGG - chr7_2:11653137-11653156 None:intergenic 25.0%
! AACATGTATAGAGAAGAATA+TGG - chr7_2:11653138-11653157 None:intergenic 25.0%
! TAGATAACAAAAGTCAGTAT+TGG - chr7_2:11653211-11653230 None:intergenic 25.0%
!!! TGAATGGTTTTAAGTAACAT+AGG - chr7_2:11653376-11653395 None:intergenic 25.0%
!!! AGCTATTTTTATAGGTTCTT+GGG - chr7_2:11653717-11653736 None:intergenic 25.0%
!!! AAGCTATTTTTATAGGTTCT+TGG - chr7_2:11653718-11653737 None:intergenic 25.0%
!!! AATGACTGCTTTTTTTATTC+CGG + chr7_2:11653743-11653762 Msa1048980:three_prime_UTR 25.0%
! GATTCTAACAGAAATTGTTT+GGG - chr7_2:11654273-11654292 None:intergenic 25.0%
! AGATTCTAACAGAAATTGTT+TGG - chr7_2:11654274-11654293 None:intergenic 25.0%
! ACAATTTCTGTTAGAATCTA+TGG + chr7_2:11654275-11654294 Msa1048980:three_prime_UTR 25.0%
! TGTTAGAATCTATGGATAAT+GGG + chr7_2:11654283-11654302 Msa1048980:three_prime_UTR 25.0%
!!! GTTTTAAATAGCAGCAATAT+CGG + chr7_2:11654422-11654441 Msa1048980:three_prime_UTR 25.0%
!!! GTTTTCTAGTACATTTCTAA+TGG + chr7_2:11654675-11654694 Msa1048980:three_prime_UTR 25.0%
! TTGTATATGTAAGAGATTGA+GGG + chr7_2:11654819-11654838 Msa1048980:three_prime_UTR 25.0%
!! CAATATGCACACATTTTATA+TGG - chr7_2:11655134-11655153 None:intergenic 25.0%
! CATATAAAATGTGTGCATAT+TGG + chr7_2:11655132-11655151 Msa1048980:three_prime_UTR 25.0%
! CAAAATAGTGAGTGTTAAAA+TGG - chr7_2:11655201-11655220 None:intergenic 25.0%
! TTATCATTGATCAATAGGAA+AGG + chr7_2:11655283-11655302 Msa1048980:three_prime_UTR 25.0%
! TATGGTAAATAGTTGAGATT+CGG + chr7_2:11655596-11655615 Msa1048980:three_prime_UTR 25.0%
!! TGACCTTTTGTAATCTTAAA+AGG - chr7_2:11655722-11655741 None:intergenic 25.0%
! TAAGATTACAAAAGGTCATT+TGG + chr7_2:11655724-11655743 Msa1048980:three_prime_UTR 25.0%
! GTTTTGTGAATTGTGAGTTT+AGG - chr7_2:11648971-11648990 None:intergenic 30.0%
!! TCGAATGATTTTGAAGATTC+TGG + chr7_2:11649322-11649341 Msa1048980:CDS 30.0%
TGAAGATGAAGATGTTGATA+TGG + chr7_2:11649420-11649439 Msa1048980:CDS 30.0%
TATTAGAGTTTCTCAGTGTA+TGG + chr7_2:11649489-11649508 Msa1048980:intron 30.0%
ATTAGAGTTTCTCAGTGTAT+GGG + chr7_2:11649490-11649509 Msa1048980:intron 30.0%
GCGTAATTCTTTAAGCTATT+TGG + chr7_2:11649615-11649634 Msa1048980:intron 30.0%
ATATTTGGTATTATCGAGTC+GGG + chr7_2:11649705-11649724 Msa1048980:intron 30.0%
ATAAGTGTTTGTGTCATGTT+TGG + chr7_2:11649847-11649866 Msa1048980:intron 30.0%
TTATAATTCACTCACATACG+CGG - chr7_2:11649876-11649895 None:intergenic 30.0%
TTGTGATCTCTAATGTTATC+AGG + chr7_2:11650507-11650526 Msa1048980:intron 30.0%
AATCTACAGCCCAATTAAAA+AGG - chr7_2:11650734-11650753 None:intergenic 30.0%
ATATTGATCATGATCCACTT+TGG + chr7_2:11650830-11650849 Msa1048980:intron 30.0%
GTATTAAATAGCATCCACAT+GGG - chr7_2:11651236-11651255 None:intergenic 30.0%
!!! AGATTGACAACATTTTTTCC+TGG + chr7_2:11651329-11651348 Msa1048980:intron 30.0%
TACGAAAACAACTTACTGTT+CGG - chr7_2:11651413-11651432 None:intergenic 30.0%
TATAGAGCCTCTATTTGAAT+CGG - chr7_2:11651495-11651514 None:intergenic 30.0%
ATAAGAAATGATTGAATGGC+TGG + chr7_2:11652197-11652216 Msa1048980:intron 30.0%
! CATCTTCAGTTGCAATTTTA+GGG - chr7_2:11652485-11652504 None:intergenic 30.0%
! TCATCTTCAGTTGCAATTTT+AGG - chr7_2:11652486-11652505 None:intergenic 30.0%
!!! TGCTTGAATGATGTCTTTTT+TGG + chr7_2:11652539-11652558 Msa1048980:intron 30.0%
!!! GCTTGAATGATGTCTTTTTT+GGG + chr7_2:11652540-11652559 Msa1048980:intron 30.0%
!!! TGATGTCTTTTTTGGGAAAT+CGG + chr7_2:11652547-11652566 Msa1048980:intron 30.0%
AATAGTAGTTCAGAATCATC+GGG - chr7_2:11652584-11652603 None:intergenic 30.0%
! TCTCAATGCTTTTAGATTTC+GGG + chr7_2:11652613-11652632 Msa1048980:intron 30.0%
! GAGAGCAAATCTTTTTGATA+AGG + chr7_2:11652684-11652703 Msa1048980:CDS 30.0%
TATTCTTATTCTGATGGCTA+TGG + chr7_2:11652823-11652842 Msa1048980:CDS 30.0%
!! TTTTTCCAGGATTTTAAGTG+CGG + chr7_2:11652922-11652941 Msa1048980:intron 30.0%
!!! TGGTTTTAAGTAACATAGGA+AGG - chr7_2:11653372-11653391 None:intergenic 30.0%
TCTGTTAATGCTAATGTGAA+TGG - chr7_2:11653392-11653411 None:intergenic 30.0%
ATGAGCATCAAAATTCTACA+TGG - chr7_2:11653440-11653459 None:intergenic 30.0%
!! GTTTTAGATCTAAAGACAAC+CGG - chr7_2:11653765-11653784 None:intergenic 30.0%
! TTTAGATCTAAAACACCATG+TGG + chr7_2:11653771-11653790 Msa1048980:three_prime_UTR 30.0%
TAAATTTGAAAGACCTTGTG+TGG + chr7_2:11653943-11653962 Msa1048980:three_prime_UTR 30.0%
ATCTGACCACTATCTTATAT+TGG + chr7_2:11654019-11654038 Msa1048980:three_prime_UTR 30.0%
GCAAAACCAATATAAGATAG+TGG - chr7_2:11654028-11654047 None:intergenic 30.0%
!! TAGTTGAACTTTTTCCAGTT+CGG + chr7_2:11654066-11654085 Msa1048980:three_prime_UTR 30.0%
!!! TCTGGTTTTTTTTTGAGTGA+AGG + chr7_2:11654161-11654180 Msa1048980:three_prime_UTR 30.0%
! AATTGTTTTCAAAACTGTGC+GGG - chr7_2:11654228-11654247 None:intergenic 30.0%
! GAATTGTTTTCAAAACTGTG+CGG - chr7_2:11654229-11654248 None:intergenic 30.0%
CTGTTAGAATCTATGGATAA+TGG + chr7_2:11654282-11654301 Msa1048980:three_prime_UTR 30.0%
ACAATTTCCGTTAGAATCTA+TGG + chr7_2:11654313-11654332 Msa1048980:three_prime_UTR 30.0%
CCATTATCCATAGATTCTAA+CGG - chr7_2:11654285-11654304 None:intergenic 30.0%
CGTTAGAATCTATGGATAAT+GGG + chr7_2:11654321-11654340 Msa1048980:three_prime_UTR 30.0%
AAAAACAAACAAGCATGGAT+TGG - chr7_2:11654713-11654732 None:intergenic 30.0%
AACTCAAAAACAAACAAGCA+TGG - chr7_2:11654718-11654737 None:intergenic 30.0%
CTCAATCTCTTACATATACA+AGG - chr7_2:11654820-11654839 None:intergenic 30.0%
CTTGTATATGTAAGAGATTG+AGG + chr7_2:11654818-11654837 Msa1048980:three_prime_UTR 30.0%
AAAACAAGCTTAATCCAAAC+AGG - chr7_2:11654845-11654864 None:intergenic 30.0%
ATATTTCATCATTCGATCAC+TGG + chr7_2:11655245-11655264 Msa1048980:three_prime_UTR 30.0%
TATTTCATCATTCGATCACT+GGG + chr7_2:11655246-11655265 Msa1048980:three_prime_UTR 30.0%
TGTTTAACATGGCATTTATG+TGG - chr7_2:11655377-11655396 None:intergenic 30.0%
TATAAGTACAAGAGGTTATG+AGG + chr7_2:11655454-11655473 Msa1048980:three_prime_UTR 30.0%
AAGACTAATATCCAACAGTT+GGG - chr7_2:11655481-11655500 None:intergenic 30.0%
!! ATTAGTCTTGCTCTATGTTT+AGG + chr7_2:11655492-11655511 Msa1048980:three_prime_UTR 30.0%
! ATGGAACTTGTTCAAGTATT+TGG + chr7_2:11655570-11655589 Msa1048980:three_prime_UTR 30.0%
TGTTCAAGTATTTGGAGATA+TGG + chr7_2:11655578-11655597 Msa1048980:three_prime_UTR 30.0%
GACAGGTAATCTATTAGATT+AGG + chr7_2:11655696-11655715 Msa1048980:three_prime_UTR 30.0%
!!! AGGCCTTTTAAGATTACAAA+AGG + chr7_2:11655716-11655735 Msa1048980:three_prime_UTR 30.0%
ACAATTCTCACGATTCACAA+TGG + chr7_2:11648991-11649010 Msa1048980:CDS 35.0%
GTTATGTGAAATGTGTCTCT+TGG - chr7_2:11649124-11649143 None:intergenic 35.0%
TGAAGATGTTGATATGGAGA+AGG + chr7_2:11649426-11649445 Msa1048980:CDS 35.0%
TATCATATCAAGCACGAACA+CGG - chr7_2:11649529-11649548 None:intergenic 35.0%
GGATTATTCAGTGTCATATC+TGG + chr7_2:11649587-11649606 Msa1048980:intron 35.0%
GCTATTGAGATTGTTGAATC+TGG + chr7_2:11649925-11649944 Msa1048980:intron 35.0%
TGCTTATAATAGTGGCCATA+GGG - chr7_2:11649980-11649999 None:intergenic 35.0%
TTGCTTATAATAGTGGCCAT+AGG - chr7_2:11649981-11650000 None:intergenic 35.0%
ACCATCTTTGCTTACAATAG+TGG + chr7_2:11650006-11650025 Msa1048980:intron 35.0%
! ATCAGATTTTATGCCGTGTT+TGG + chr7_2:11650095-11650114 Msa1048980:intron 35.0%
AAATTACTAGTTACACCCTC+TGG - chr7_2:11650428-11650447 None:intergenic 35.0%
TGATCTCTAATGTTATCAGG+TGG + chr7_2:11650510-11650529 Msa1048980:intron 35.0%
GGCAGATTGTTCAGAATATA+AGG + chr7_2:11650605-11650624 Msa1048980:CDS 35.0%
TTAGGATTCTTAAGGATGAC+CGG + chr7_2:11650647-11650666 Msa1048980:CDS 35.0%
!! CCATTTGACAACATTGATTC+AGG - chr7_2:11651005-11651024 None:intergenic 35.0%
CCTGAATCAATGTTGTCAAA+TGG + chr7_2:11651002-11651021 Msa1048980:intron 35.0%
GAATCAATGTTGTCAAATGG+CGG + chr7_2:11651005-11651024 Msa1048980:intron 35.0%
AATGTTGTCAATCCAGATCA+CGG - chr7_2:11651087-11651106 None:intergenic 35.0%
!! GTTGTTTTCATAAGTTGTCC+TGG + chr7_2:11651158-11651177 Msa1048980:intron 35.0%
CGTATTAAATAGCATCCACA+TGG - chr7_2:11651237-11651256 None:intergenic 35.0%
!!! CATTTTTTCCTGGAGAGTTA+TGG + chr7_2:11651339-11651358 Msa1048980:intron 35.0%
ACGAAAACAACTTACTGTTC+GGG - chr7_2:11651412-11651431 None:intergenic 35.0%
CTTCATTTGTGAAACTGTTC+AGG - chr7_2:11651442-11651461 None:intergenic 35.0%
! AAATGAGCCGATTCAAATAG+AGG + chr7_2:11651485-11651504 Msa1048980:intron 35.0%
! TGAGATTGCTGTTGTGAAAA+AGG + chr7_2:11651717-11651736 Msa1048980:CDS 35.0%
TAGCAGTTGGACAAACAAAT+CGG - chr7_2:11651987-11652006 None:intergenic 35.0%
!! ATTGGAGGTGTTATAGGTAA+GGG + chr7_2:11652009-11652028 Msa1048980:CDS 35.0%
AATCAAATTAGGCAGGATTC+TGG + chr7_2:11652045-11652064 Msa1048980:CDS 35.0%
ATCAAATTAGGCAGGATTCT+GGG + chr7_2:11652046-11652065 Msa1048980:CDS 35.0%
TGACTGCTTAATAGCCATTT+CGG + chr7_2:11652107-11652126 Msa1048980:CDS 35.0%
GGGCATAAGAAATGATTGAA+TGG + chr7_2:11652193-11652212 Msa1048980:intron 35.0%
TGTGTTTATGCAGTTCTTTG+AGG + chr7_2:11652248-11652267 Msa1048980:intron 35.0%
GAGAAAGTTGAAAGAGATTC+TGG + chr7_2:11652324-11652343 Msa1048980:CDS 35.0%
! ATTGGTTGCCTTATTGGTAA+AGG + chr7_2:11652390-11652409 Msa1048980:CDS 35.0%
TTGATCCTCCTTTACCAATA+AGG - chr7_2:11652401-11652420 None:intergenic 35.0%
CAATCATTACTGAGATGAGA+AGG + chr7_2:11652418-11652437 Msa1048980:CDS 35.0%
TGCAACTGAAGATGATGAAA+TGG + chr7_2:11652491-11652510 Msa1048980:CDS 35.0%
! CTCAATGCTTTTAGATTTCG+GGG + chr7_2:11652614-11652633 Msa1048980:intron 35.0%
! TCAATGCTTTTAGATTTCGG+GGG + chr7_2:11652615-11652634 Msa1048980:intron 35.0%
TTCAACTATGAAGGTAGAGA+TGG + chr7_2:11652778-11652797 Msa1048980:CDS 35.0%
TAACTTCCATAAGCTCCATA+AGG - chr7_2:11653030-11653049 None:intergenic 35.0%
AGCTTATGGAAGTTATGCTA+CGG + chr7_2:11653035-11653054 Msa1048980:CDS 35.0%
AACCATGGTTACTAAAACCT+TGG + chr7_2:11653290-11653309 Msa1048980:exon 35.0%
ATGGTTACTAAAACCTTGGT+GGG + chr7_2:11653294-11653313 Msa1048980:exon 35.0%
CAAAATTCTACATGGTACAC+TGG - chr7_2:11653432-11653451 None:intergenic 35.0%
TTCAATAGTCTCCACATGTT+TGG - chr7_2:11653645-11653664 None:intergenic 35.0%
GAAGTAAGGTAAAATGGACA+TGG - chr7_2:11653673-11653692 None:intergenic 35.0%
GCTTAGGAAGTAAGGTAAAA+TGG - chr7_2:11653679-11653698 None:intergenic 35.0%
AGATAGTACAGGTATACAAC+TGG - chr7_2:11653810-11653829 None:intergenic 35.0%
CGACAAAACAAAGATAGTAC+AGG - chr7_2:11653821-11653840 None:intergenic 35.0%
!!! TTTGTTTTGTCGTGTTTTCC+TGG + chr7_2:11653829-11653848 Msa1048980:three_prime_UTR 35.0%
ATTTAACGCACAAGACTGTA+AGG - chr7_2:11653928-11653947 None:intergenic 35.0%
!! GAATGGACTGAATACAAGAT+TGG + chr7_2:11654109-11654128 Msa1048980:three_prime_UTR 35.0%
!! TGAATACAAGATTGGTTCGT+TGG + chr7_2:11654117-11654136 Msa1048980:three_prime_UTR 35.0%
!! TCGTTGGTGTTTAGTTTGAA+TGG + chr7_2:11654133-11654152 Msa1048980:three_prime_UTR 35.0%
!! CGTTGGTGTTTAGTTTGAAT+GGG + chr7_2:11654134-11654153 Msa1048980:three_prime_UTR 35.0%
!! CAGAAATTGTTTGGGTTGTT+TGG - chr7_2:11654265-11654284 None:intergenic 35.0%
CCGTTAGAATCTATGGATAA+TGG + chr7_2:11654320-11654339 Msa1048980:three_prime_UTR 35.0%
! GCTATTTAAAACAACTGCTC+TGG - chr7_2:11654414-11654433 None:intergenic 35.0%
TATGAAACTAAACACCGAAC+TGG + chr7_2:11654641-11654660 Msa1048980:three_prime_UTR 35.0%
!!! GTTTTTGAGTTCTACCTTTG+AGG + chr7_2:11654727-11654746 Msa1048980:three_prime_UTR 35.0%
CATGTCACATCATAAACTCA+GGG - chr7_2:11655062-11655081 None:intergenic 35.0%
ACATGTCACATCATAAACTC+AGG - chr7_2:11655063-11655082 None:intergenic 35.0%
ATTAAATGAACTAGCCCTAG+AGG - chr7_2:11655163-11655182 None:intergenic 35.0%
ATTGATCAATAGGAAAGGCT+AGG + chr7_2:11655288-11655307 Msa1048980:three_prime_UTR 35.0%
GTTAGTCGTATAAGTACAAG+AGG + chr7_2:11655446-11655465 Msa1048980:three_prime_UTR 35.0%
CAAGACTAATATCCAACAGT+TGG - chr7_2:11655482-11655501 None:intergenic 35.0%
!! TTGCTCTATGTTTAGGTTGT+TGG + chr7_2:11655499-11655518 Msa1048980:three_prime_UTR 35.0%
TAATCCAAGGAATCTCAAAG+TGG - chr7_2:11655551-11655570 None:intergenic 35.0%
!! CTTTGAGATTCCTTGGATTA+TGG + chr7_2:11655551-11655570 Msa1048980:three_prime_UTR 35.0%
TGAACAAGTTCCATAATCCA+AGG - chr7_2:11655564-11655583 None:intergenic 35.0%
CAATGTTCATTGAATGCAGT+TGG + chr7_2:11655657-11655676 Msa1048980:three_prime_UTR 35.0%
CAGGAACAGTTTCACCAATT+CGG - chr7_2:11649258-11649277 None:intergenic 40.0%
! TTGTGATGAGCGTGTTGTTA+CGG + chr7_2:11649279-11649298 Msa1048980:CDS 40.0%
TGAGTTTATGTGTCCTGCTA+TGG + chr7_2:11649345-11649364 Msa1048980:CDS 40.0%
GGATTATTGTCTGTGTGATG+AGG + chr7_2:11649636-11649655 Msa1048980:intron 40.0%
GAGATTGTTGAATCTGGTGT+CGG + chr7_2:11649931-11649950 Msa1048980:intron 40.0%
GCCACTATTGTAAGCAAAGA+TGG - chr7_2:11650010-11650029 None:intergenic 40.0%
TTGCTTACAATAGTGGCTGT+AGG + chr7_2:11650013-11650032 Msa1048980:intron 40.0%
TGCTTACAATAGTGGCTGTA+GGG + chr7_2:11650014-11650033 Msa1048980:intron 40.0%
ACAGACATGAACACCAAACA+CGG - chr7_2:11650111-11650130 None:intergenic 40.0%
GCATAACATGAAGAAACCGT+AGG - chr7_2:11650222-11650241 None:intergenic 40.0%
TTGCTTATAATAGTGGCCGT+AGG - chr7_2:11650293-11650312 None:intergenic 40.0%
CTCTAATGTTATCAGGTGGA+TGG + chr7_2:11650514-11650533 Msa1048980:intron 40.0%
TAATGTTATCAGGTGGATGG+AGG + chr7_2:11650517-11650536 Msa1048980:intron 40.0%
AATGTTATCAGGTGGATGGA+GGG + chr7_2:11650518-11650537 Msa1048980:intron 40.0%
ATCAGATTGGGTGTGTGATT+GGG + chr7_2:11650575-11650594 Msa1048980:intron 40.0%
CAGAATATAAGGAGTGAGAC+TGG + chr7_2:11650616-11650635 Msa1048980:CDS 40.0%
TGCGCAGATTAGGATTCTTA+AGG + chr7_2:11650639-11650658 Msa1048980:CDS 40.0%
TCAATCCAGATCACGGAAAA+TGG - chr7_2:11651080-11651099 None:intergenic 40.0%
! CTGGATTGACAACATTTTCC+TGG + chr7_2:11651091-11651110 Msa1048980:intron 40.0%
! GATTGACAACATTTTCCTGG+AGG + chr7_2:11651094-11651113 Msa1048980:intron 40.0%
! TTTTCCTGGAGGAGAGTTTA+TGG + chr7_2:11651105-11651124 Msa1048980:intron 40.0%
!! TTTGAATGGATTGTCCCATG+TGG + chr7_2:11651219-11651238 Msa1048980:intron 40.0%
!! TACGAAGTGTTGTCAAACAG+TGG + chr7_2:11651253-11651272 Msa1048980:intron 40.0%
! AAACCACCATTTTCCATGAG+TGG + chr7_2:11651282-11651301 Msa1048980:intron 40.0%
GTTCAACCACTCATGGAAAA+TGG - chr7_2:11651291-11651310 None:intergenic 40.0%
!! GTTGAACAAACCGCCATTTT+GGG + chr7_2:11651304-11651323 Msa1048980:intron 40.0%
GTTGTCAATCTCACCCAAAA+TGG - chr7_2:11651320-11651339 None:intergenic 40.0%
ACTTACTTCCATAACTCTCC+AGG - chr7_2:11651350-11651369 None:intergenic 40.0%
!! AAAGGCTCTGATTCAAGTTG+CGG + chr7_2:11651735-11651754 Msa1048980:CDS 40.0%
GCAAATGTTGAGTACGTGAA+GGG - chr7_2:11651777-11651796 None:intergenic 40.0%
AGCAAATGTTGAGTACGTGA+AGG - chr7_2:11651778-11651797 None:intergenic 40.0%
AATCGGACTGAAAACTCCTT+CGG - chr7_2:11651970-11651989 None:intergenic 40.0%
GTTTGTCCAACTGCTAACAT+TGG + chr7_2:11651991-11652010 Msa1048980:CDS 40.0%
!! GCTAACATTGGAGGTGTTAT+AGG + chr7_2:11652003-11652022 Msa1048980:CDS 40.0%
!! CATTGGAGGTGTTATAGGTA+AGG + chr7_2:11652008-11652027 Msa1048980:CDS 40.0%
TCAAATTAGGCAGGATTCTG+GGG + chr7_2:11652047-11652066 Msa1048980:CDS 40.0%
TTTCAACTTTCTCACTGCAC+CGG - chr7_2:11652317-11652336 None:intergenic 40.0%
GTATTCTCTCTTTCACTAGC+CGG + chr7_2:11652346-11652365 Msa1048980:CDS 40.0%
TCTCGAATTGGTTGCCTTAT+TGG + chr7_2:11652384-11652403 Msa1048980:CDS 40.0%
TAACATCCGCATCCTATCTA+AGG + chr7_2:11652452-11652471 Msa1048980:CDS 40.0%
TGAAGATGATGAAATGGTGC+AGG + chr7_2:11652497-11652516 Msa1048980:CDS 40.0%
! AAAAAGATTTGCTCTCAGCC+GGG - chr7_2:11652680-11652699 None:intergenic 40.0%
! CAAAAAGATTTGCTCTCAGC+CGG - chr7_2:11652681-11652700 None:intergenic 40.0%
CCTTCATAGTTGAAACCATC+TGG - chr7_2:11652772-11652791 None:intergenic 40.0%
CCAGATGGTTTCAACTATGA+AGG + chr7_2:11652769-11652788 Msa1048980:CDS 40.0%
GGTGGCTATTCTTATTCTGA+TGG + chr7_2:11652817-11652836 Msa1048980:CDS 40.0%
TCTTATTCTGATGGCTATGG+AGG + chr7_2:11652826-11652845 Msa1048980:CDS 40.0%
TGGAAACTATGGAAGTTCAC+AGG + chr7_2:11652879-11652898 Msa1048980:CDS 40.0%
ATGGAAGTTATGCTACGGAA+CGG + chr7_2:11653040-11653059 Msa1048980:CDS 40.0%
GGACAATCTATCAGACAATC+TGG - chr7_2:11653237-11653256 None:intergenic 40.0%
!! CACCAAGGTTTTAGTAACCA+TGG - chr7_2:11653295-11653314 None:intergenic 40.0%
CATGGTTACTAAAACCTTGG+TGG + chr7_2:11653293-11653312 Msa1048980:exon 40.0%
GAAGCTAAAATCTACCTGCA+GGG - chr7_2:11653321-11653340 None:intergenic 40.0%
ATAACTCAGCTGTTTGGATG+GGG - chr7_2:11653488-11653507 None:intergenic 40.0%
CATAACTCAGCTGTTTGGAT+GGG - chr7_2:11653489-11653508 None:intergenic 40.0%
ACATAACTCAGCTGTTTGGA+TGG - chr7_2:11653490-11653509 None:intergenic 40.0%
CTTCACATAACTCAGCTGTT+TGG - chr7_2:11653494-11653513 None:intergenic 40.0%
TTCATCTCGTCTTCCAGTTT+AGG - chr7_2:11653532-11653551 None:intergenic 40.0%
CCATGAATTTGTCAGTCACT+GGG - chr7_2:11653595-11653614 None:intergenic 40.0%
AACCTTGATGCCTCTATCTA+GGG + chr7_2:11653617-11653636 Msa1048980:three_prime_UTR 40.0%
TACAGGTATACAACTGGCAA+AGG - chr7_2:11653804-11653823 None:intergenic 40.0%
GCAAGTAACTATGAACTACC+AGG - chr7_2:11653850-11653869 None:intergenic 40.0%
CATTCAGCTCATATAACCAG+AGG - chr7_2:11654094-11654113 None:intergenic 40.0%
CTCTGGTTATATGAGCTGAA+TGG + chr7_2:11654092-11654111 Msa1048980:three_prime_UTR 40.0%
!! TTAGTTTGAATGGGCTAGTC+TGG + chr7_2:11654143-11654162 Msa1048980:three_prime_UTR 40.0%
CTCTACACAACAATGCTGTA+AGG - chr7_2:11654538-11654557 None:intergenic 40.0%
CTTACAGCATTGTTGTGTAG+AGG + chr7_2:11654536-11654555 Msa1048980:three_prime_UTR 40.0%
TGGATCAGTGTTGTCAATTG+CGG - chr7_2:11654590-11654609 None:intergenic 40.0%
AACTATACACCACACCAGTT+CGG - chr7_2:11654658-11654677 None:intergenic 40.0%
!! AACAAGCATGGATTGGAAGT+TGG - chr7_2:11654706-11654725 None:intergenic 40.0%
GCTTAGCCACATCTAGTTAA+GGG + chr7_2:11654759-11654778 Msa1048980:three_prime_UTR 40.0%
ATGCAACCCTTAACTAGATG+TGG - chr7_2:11654768-11654787 None:intergenic 40.0%
AAATGGCAACGCTAGCTAAA+TGG - chr7_2:11655105-11655124 None:intergenic 40.0%
TGCATATTGGATTGTCCTCT+AGG + chr7_2:11655145-11655164 Msa1048980:three_prime_UTR 40.0%
GCATATTGGATTGTCCTCTA+GGG + chr7_2:11655146-11655165 Msa1048980:three_prime_UTR 40.0%
!! CAGAATGGTGCTGTTTAACA+TGG - chr7_2:11655388-11655407 None:intergenic 40.0%
ACGTGTTCAGAAGACAGATA+AGG - chr7_2:11655428-11655447 None:intergenic 40.0%
AATGAACATTGCAGACCAAG+GGG - chr7_2:11655648-11655667 None:intergenic 40.0%
CAATGAACATTGCAGACCAA+GGG - chr7_2:11655649-11655668 None:intergenic 40.0%
TCAATGAACATTGCAGACCA+AGG - chr7_2:11655650-11655669 None:intergenic 40.0%
GAATGCAGTTGGATTTCTTC+AGG + chr7_2:11655668-11655687 Msa1048980:three_prime_UTR 40.0%
GATTTCTTCAGGAATGAGAC+AGG + chr7_2:11655679-11655698 Msa1048980:three_prime_UTR 40.0%
TTCTCACGATTCACAATGGC+TGG + chr7_2:11648995-11649014 Msa1048980:CDS 45.0%
GCTGGTCAAAGAACATCCTA+CGG + chr7_2:11649013-11649032 Msa1048980:CDS 45.0%
!! TTTCGTCGGTGTTAGGGTTA+CGG - chr7_2:11649096-11649115 None:intergenic 45.0%
GTGAAATGTGTCTCTTGGAG+TGG - chr7_2:11649119-11649138 None:intergenic 45.0%
! CGGACAAAGGTAACGGTAAA+CGG - chr7_2:11649158-11649177 None:intergenic 45.0%
CGTTTACCGTTACCTTTGTC+CGG + chr7_2:11649156-11649175 Msa1048980:CDS 45.0%
! CTTTGTCCGGTTCGCAAAAT+CGG + chr7_2:11649169-11649188 Msa1048980:CDS 45.0%
ACAACTCCGTCTTGATACGA+AGG + chr7_2:11649225-11649244 Msa1048980:CDS 45.0%
TCTTCGCCTTCGTATCAAGA+CGG - chr7_2:11649234-11649253 None:intergenic 45.0%
CGAATTGGTGAAACTGTTCC+TGG + chr7_2:11649256-11649275 Msa1048980:CDS 45.0%
GCTTGTCAGGATTCATCAGA+AGG + chr7_2:11649372-11649391 Msa1048980:CDS 45.0%
TCATCAGAAGGTGATTGCTG+AGG + chr7_2:11649384-11649403 Msa1048980:CDS 45.0%
CGATGACGTTGATATGTCGA+AGG + chr7_2:11649660-11649679 Msa1048980:intron 45.0%
TGACGTTGATATGTCGAAGG+TGG + chr7_2:11649663-11649682 Msa1048980:intron 45.0%
!! TGAATCAGTGCTGACGTGTT+TGG + chr7_2:11649756-11649775 Msa1048980:intron 45.0%
TCTGCTGTCTGTGTCTGTAA+CGG + chr7_2:11650184-11650203 Msa1048980:intron 45.0%
ACGGTGGTTCATACATCCTA+CGG + chr7_2:11650203-11650222 Msa1048980:intron 45.0%
TCTGCTGTCTGTGTCTGTAA+CGG + chr7_2:11650184-11650203 Msa1048980:intron 45.0%
ACGGTGGTTCATACATCCTA+CGG + chr7_2:11650203-11650222 Msa1048980:intron 45.0%
ATGTTATCAGGTGGATGGAG+GGG + chr7_2:11650519-11650538 Msa1048980:intron 45.0%
TTGTGGCGTCTGATCAGATT+GGG + chr7_2:11650563-11650582 Msa1048980:intron 45.0%
GATCAGATTGGGTGTGTGAT+TGG + chr7_2:11650574-11650593 Msa1048980:intron 45.0%
ATTGGGTGTGTGATTGGGAA+AGG + chr7_2:11650580-11650599 Msa1048980:CDS 45.0%
TCAGAGTTCAAAGCGCAAAG+CGG - chr7_2:11650676-11650695 None:intergenic 45.0%
TTGTCAAATGGCGGCTATTG+CGG + chr7_2:11651014-11651033 Msa1048980:intron 45.0%
!!! AACTGCCATTTTCCGTGATC+TGG + chr7_2:11651072-11651091 Msa1048980:intron 45.0%
ACTTCCATAAACTCTCCTCC+AGG - chr7_2:11651112-11651131 None:intergenic 45.0%
CAACCACTCATGGAAAATGG+TGG - chr7_2:11651288-11651307 None:intergenic 45.0%
! GGTTGAACAAACCGCCATTT+TGG + chr7_2:11651303-11651322 Msa1048980:intron 45.0%
GTCAATCTCACCCAAAATGG+CGG - chr7_2:11651317-11651336 None:intergenic 45.0%
TCGCTGAATCTTCAGATCTC+TGG + chr7_2:11651694-11651713 Msa1048980:intron 45.0%
TTGCTTACTTCTGCAGTTCC+TGG + chr7_2:11651793-11651812 Msa1048980:CDS 45.0%
TGCTTACTTCTGCAGTTCCT+GGG + chr7_2:11651794-11651813 Msa1048980:CDS 45.0%
ATCGGAGCCATTCCCATAAT+TGG - chr7_2:11651865-11651884 None:intergenic 45.0%
ATTATGGGAATGGCTCCGAT+TGG + chr7_2:11651865-11651884 Msa1048980:CDS 45.0%
GTGATGTTGGAGACTATCCA+CGG + chr7_2:11651911-11651930 Msa1048980:CDS 45.0%
TGTCCAACTGCTAACATTGG+AGG + chr7_2:11651994-11652013 Msa1048980:CDS 45.0%
ACACCTCCAATGTTAGCAGT+TGG - chr7_2:11652000-11652019 None:intergenic 45.0%
!! GGATTCTGGGGCAAATATCA+AGG + chr7_2:11652059-11652078 Msa1048980:CDS 45.0%
!! GTTGATAGTTCGGCAACTGA+AGG + chr7_2:11652081-11652100 Msa1048980:CDS 45.0%
CACAGCTGCTTCAATTGTTG+CGG - chr7_2:11652283-11652302 None:intergenic 45.0%
TTCAACTTTCTCACTGCACC+GGG - chr7_2:11652316-11652335 None:intergenic 45.0%
! GGTTGCCTTATTGGTAAAGG+AGG + chr7_2:11652393-11652412 Msa1048980:CDS 45.0%
GATCCTCCTTAGATAGGATG+CGG - chr7_2:11652461-11652480 None:intergenic 45.0%
TAGGGAGATCCTCCTTAGAT+AGG - chr7_2:11652467-11652486 None:intergenic 45.0%
ATGATGAAATGGTGCAGGTG+AGG + chr7_2:11652502-11652521 Msa1048980:intron 45.0%
CTCTTGTGCAAGTACTTACC+CGG + chr7_2:11652659-11652678 Msa1048980:CDS 45.0%
!! GGAAGATATGCAAGTACTGG+TGG - chr7_2:11652733-11652752 None:intergenic 45.0%
GCAGGAAGATATGCAAGTAC+TGG - chr7_2:11652736-11652755 None:intergenic 45.0%
TTGAAACCATCTGGTCCTTC+TGG - chr7_2:11652763-11652782 None:intergenic 45.0%
! GGCTCAAGTGATTTTGCATC+TGG + chr7_2:11652847-11652866 Msa1048980:CDS 45.0%
! AGTGATTTTGCATCTGGCGA+CGG + chr7_2:11652853-11652872 Msa1048980:CDS 45.0%
CTCATCCGCACTTAAAATCC+TGG - chr7_2:11652930-11652949 None:intergenic 45.0%
TTGTTTCATATGCGGCAGCT+TGG + chr7_2:11652994-11653013 Msa1048980:intron 45.0%
AGATTGTCCGACAGATTGTC+TGG + chr7_2:11653248-11653267 Msa1048980:CDS 45.0%
TACACCACCAGACAATCTGT+CGG - chr7_2:11653258-11653277 None:intergenic 45.0%
! GATTGTCTGGTGGTGTATCT+CGG + chr7_2:11653261-11653280 Msa1048980:CDS 45.0%
GGAAGCTAAAATCTACCTGC+AGG - chr7_2:11653322-11653341 None:intergenic 45.0%
TTCTACATGGTACACTGGTC+AGG - chr7_2:11653427-11653446 None:intergenic 45.0%
AGTTTAGGCAGTAGGCTTCA+GGG - chr7_2:11653517-11653536 None:intergenic 45.0%
GCAGTGAGTTTGTCAAACCA+TGG - chr7_2:11653555-11653574 None:intergenic 45.0%
ATTTGTCAGTCACTGGGTAG+AGG - chr7_2:11653589-11653608 None:intergenic 45.0%
CCCAGTGACTGACAAATTCA+TGG + chr7_2:11653592-11653611 Msa1048980:three_prime_UTR 45.0%
GCCATGAATTTGTCAGTCAC+TGG - chr7_2:11653596-11653615 None:intergenic 45.0%
!! CTAGATAGAGGCATCAAGGT+TGG - chr7_2:11653618-11653637 None:intergenic 45.0%
CAACCTTGATGCCTCTATCT+AGG + chr7_2:11653616-11653635 Msa1048980:three_prime_UTR 45.0%
ACCTTGATGCCTCTATCTAG+GGG + chr7_2:11653618-11653637 Msa1048980:three_prime_UTR 45.0%
ATGTTTGGTCCCCTAGATAG+AGG - chr7_2:11653630-11653649 None:intergenic 45.0%
TATCTAGGGGACCAAACATG+TGG + chr7_2:11653631-11653650 Msa1048980:three_prime_UTR 45.0%
GTTCGCAAGCTTAGGAAGTA+AGG - chr7_2:11653687-11653706 None:intergenic 45.0%
GGCAAAGGAACATATCCACA+TGG - chr7_2:11653789-11653808 None:intergenic 45.0%
ACTGCAATACAGACCACACA+AGG - chr7_2:11653959-11653978 None:intergenic 45.0%
! ACAAGAGTGATTTGTCCGCT+AGG - chr7_2:11654464-11654483 None:intergenic 45.0%
GTGTTGTCAATTGCGGATAG+CGG - chr7_2:11654583-11654602 None:intergenic 45.0%
! GTTTAGTTTCATAGCCGTCC+AGG - chr7_2:11654634-11654653 None:intergenic 45.0%
AACTAAACACCGAACTGGTG+TGG + chr7_2:11654646-11654665 Msa1048980:three_prime_UTR 45.0%
!! TCTACCTTTGAGGTCTAGCA+CGG + chr7_2:11654737-11654756 Msa1048980:three_prime_UTR 45.0%
GGCTTAGCCACATCTAGTTA+AGG + chr7_2:11654758-11654777 Msa1048980:three_prime_UTR 45.0%
ATCTGTCGTCGATCTACTGT+AGG + chr7_2:11654786-11654805 Msa1048980:three_prime_UTR 45.0%
TAAGAGATTGAGGGCCTGTT+TGG + chr7_2:11654828-11654847 Msa1048980:three_prime_UTR 45.0%
TCATAAACTCAGGGTCCGTT+TGG - chr7_2:11655053-11655072 None:intergenic 45.0%
CATCATTCGATCACTGGGAA+AGG + chr7_2:11655251-11655270 Msa1048980:three_prime_UTR 45.0%
!! CATGCCACTTTGAGATTCCT+TGG + chr7_2:11655544-11655563 Msa1048980:three_prime_UTR 45.0%
!!! TATTATTTATAAATTTGTTA+AGG - chr7_2:11654972-11654991 None:intergenic 5.0%
! GTGTGAACGTTTGTTGCCGT+AGG - chr7_2:11649032-11649051 None:intergenic 50.0%
!! AGGGTTACGGCGTTTGTTGT+TGG - chr7_2:11649083-11649102 None:intergenic 50.0%
!! GAGTGGTTTCGTCGGTGTTA+GGG - chr7_2:11649102-11649121 None:intergenic 50.0%
GTCTCTTGGAGTGGTTTCGT+CGG - chr7_2:11649110-11649129 None:intergenic 50.0%
TGCGAACCGGACAAAGGTAA+CGG - chr7_2:11649165-11649184 None:intergenic 50.0%
! CGATTTTGCGAACCGGACAA+AGG - chr7_2:11649171-11649190 None:intergenic 50.0%
!!! ATGCTGCCGATTTTGCGAAC+CGG - chr7_2:11649178-11649197 None:intergenic 50.0%
CGCAAAATCGGCAGCATCAT+TGG + chr7_2:11649181-11649200 Msa1048980:CDS 50.0%
ACGAAGGCGAAGATCCGAAT+TGG + chr7_2:11649241-11649260 Msa1048980:CDS 50.0%
ACAACACGCTCATCACAACC+AGG - chr7_2:11649277-11649296 None:intergenic 50.0%
GTGATTGCTGAGGATTTGCG+TGG + chr7_2:11649394-11649413 Msa1048980:CDS 50.0%
ATTGCTGAGGATTTGCGTGG+TGG + chr7_2:11649397-11649416 Msa1048980:CDS 50.0%
CTCAGTGTATGGGTCGTGTT+TGG + chr7_2:11649500-11649519 Msa1048980:intron 50.0%
!! TCTGGTGTCGGTGTTTGTGA+CGG + chr7_2:11649943-11649962 Msa1048980:intron 50.0%
ACGGTGATTCGTACACCCTA+TGG + chr7_2:11649962-11649981 Msa1048980:intron 50.0%
! GGATGGAGGGGATTTGGTTA+CGG + chr7_2:11650531-11650550 Msa1048980:intron 50.0%
GGTTACGGCGAAATTGCTTG+TGG + chr7_2:11650546-11650565 Msa1048980:intron 50.0%
CTTGTGGCGTCTGATCAGAT+TGG + chr7_2:11650562-11650581 Msa1048980:intron 50.0%
GGTGTGTGATTGGGAAAGGT+GGG + chr7_2:11650584-11650603 Msa1048980:CDS 50.0%
! GAACTCTGACGAGCTTGTTC+AGG + chr7_2:11650687-11650706 Msa1048980:CDS 50.0%
GCTTGACAACACTAAGCTCC+AGG - chr7_2:11651179-11651198 None:intergenic 50.0%
! GCGGTTTGTTCAACCACTCA+TGG - chr7_2:11651298-11651317 None:intergenic 50.0%
!! CTCTGATTCAAGTTGCGGCA+CGG + chr7_2:11651740-11651759 Msa1048980:CDS 50.0%
GCTTACTTCTGCAGTTCCTG+GGG + chr7_2:11651795-11651814 Msa1048980:CDS 50.0%
AGAACCCACCATTGAACCAC+CGG - chr7_2:11651830-11651849 None:intergenic 50.0%
!! GGTTCAATGGTGGGTTCTCA+TGG + chr7_2:11651832-11651851 Msa1048980:CDS 50.0%
!! TCAATGGTGGGTTCTCATGG+TGG + chr7_2:11651835-11651854 Msa1048980:CDS 50.0%
!! CAATGGTGGGTTCTCATGGT+GGG + chr7_2:11651836-11651855 Msa1048980:CDS 50.0%
!! AATGGTGGGTTCTCATGGTG+GGG + chr7_2:11651837-11651856 Msa1048980:CDS 50.0%
! TCATGGTGGGGCTCCAATTA+TGG + chr7_2:11651849-11651868 Msa1048980:CDS 50.0%
! CATGGTGGGGCTCCAATTAT+GGG + chr7_2:11651850-11651869 Msa1048980:CDS 50.0%
TGGGGCTCCAATTATGGGAA+TGG + chr7_2:11651855-11651874 Msa1048980:CDS 50.0%
!! CTCCGATTGGTGGTGGTTAT+GGG + chr7_2:11651878-11651897 Msa1048980:CDS 50.0%
!! TCCGATTGGTGGTGGTTATG+GGG + chr7_2:11651879-11651898 Msa1048980:CDS 50.0%
! GGTGGTTATGGGGGGTATAA+AGG + chr7_2:11651889-11651908 Msa1048980:CDS 50.0%
! GGGGGGTATAAAGGTGATGT+TGG + chr7_2:11651898-11651917 Msa1048980:CDS 50.0%
CTATCCACGGTCCATGTATC+CGG + chr7_2:11651924-11651943 Msa1048980:CDS 50.0%
TATCCACGGTCCATGTATCC+GGG + chr7_2:11651925-11651944 Msa1048980:CDS 50.0%
AAGGGATGAAGGTTCTCCGA+AGG + chr7_2:11651951-11651970 Msa1048980:CDS 50.0%
!! GGAGGTGTTATAGGTAAGGG+CGG + chr7_2:11652012-11652031 Msa1048980:CDS 50.0%
AATAGCCATTTCGGCGAGAG+AGG + chr7_2:11652116-11652135 Msa1048980:CDS 50.0%
TTCTACCTCTCTCGCCGAAA+TGG - chr7_2:11652124-11652143 None:intergenic 50.0%
TCAACTTTCTCACTGCACCG+GGG - chr7_2:11652315-11652334 None:intergenic 50.0%
CTCTTTCACTAGCCGGTTAC+TGG + chr7_2:11652353-11652372 Msa1048980:CDS 50.0%
GAGAGCTTGACACCAGTAAC+CGG - chr7_2:11652368-11652387 None:intergenic 50.0%
! CTGGTGTCAAGCTCTCGAAT+TGG + chr7_2:11652372-11652391 Msa1048980:CDS 50.0%
CATCCGCATCCTATCTAAGG+AGG + chr7_2:11652455-11652474 Msa1048980:CDS 50.0%
GGGGGAACTAGATATTGCCA+AGG + chr7_2:11652633-11652652 Msa1048980:CDS 50.0%
!! TACTTGCACAAGAGCGTCCT+TGG - chr7_2:11652653-11652672 None:intergenic 50.0%
TATCTTCCTGCTTCGCCAGA+AGG + chr7_2:11652745-11652764 Msa1048980:CDS 50.0%
GGTAGAGATGGAAGACGACA+TGG + chr7_2:11652790-11652809 Msa1048980:CDS 50.0%
TTTGCATCTGGCGACGGTTA+TGG + chr7_2:11652859-11652878 Msa1048980:CDS 50.0%
GGCGACGGTTATGGAAACTA+TGG + chr7_2:11652868-11652887 Msa1048980:CDS 50.0%
GGTGGTCCTTATGGAGCTTA+TGG + chr7_2:11653021-11653040 Msa1048980:CDS 50.0%
!! ACGGAACGGACTAGTACTTC+TGG + chr7_2:11653054-11653073 Msa1048980:CDS 50.0%
!! CGGAACGGACTAGTACTTCT+GGG + chr7_2:11653055-11653074 Msa1048980:CDS 50.0%
TTGTCCGACAGATTGTCTGG+TGG + chr7_2:11653251-11653270 Msa1048980:CDS 50.0%
GTATCTCGGAGGAGAAACCA+TGG + chr7_2:11653275-11653294 Msa1048980:CDS 50.0%
GGGAAGGGAAAGGCAACAAA+GGG - chr7_2:11653468-11653487 None:intergenic 50.0%
TGTTTGGATGGGGAAGGGAA+AGG - chr7_2:11653478-11653497 None:intergenic 50.0%
TCAGCTGTTTGGATGGGGAA+GGG - chr7_2:11653483-11653502 None:intergenic 50.0%
CAGTTTAGGCAGTAGGCTTC+AGG - chr7_2:11653518-11653537 None:intergenic 50.0%
CTGAAGCCTACTGCCTAAAC+TGG + chr7_2:11653516-11653535 Msa1048980:three_prime_UTR 50.0%
CGTCTTCCAGTTTAGGCAGT+AGG - chr7_2:11653525-11653544 None:intergenic 50.0%
CTGGAAGACGAGATGAACCA+TGG + chr7_2:11653535-11653554 Msa1048980:three_prime_UTR 50.0%
!! TCCCCTAGATAGAGGCATCA+AGG - chr7_2:11653622-11653641 None:intergenic 50.0%
GAGCACATGTTCGCAAGCTT+AGG - chr7_2:11653695-11653714 None:intergenic 50.0%
! TTTTTCCAGTTCGGCTCCTC+TGG + chr7_2:11654075-11654094 Msa1048980:three_prime_UTR 50.0%
TATAACCAGAGGAGCCGAAC+TGG - chr7_2:11654083-11654102 None:intergenic 50.0%
GCAATAGCGCTATTGCCTAG+CGG + chr7_2:11654446-11654465 Msa1048980:three_prime_UTR 50.0%
TGGCTGTACAGTCTTAGCTC+TGG - chr7_2:11654610-11654629 None:intergenic 50.0%
CTAAGACTGTACAGCCATCC+TGG + chr7_2:11654613-11654632 Msa1048980:three_prime_UTR 50.0%
AGTTTCATAGCCGTCCAGGA+TGG - chr7_2:11654630-11654649 None:intergenic 50.0%
TAAGCCGTGCTAGACCTCAA+AGG - chr7_2:11654744-11654763 None:intergenic 50.0%
TTCGATCACTGGGAAAGGCT+AGG + chr7_2:11655256-11655275 Msa1048980:three_prime_UTR 50.0%
GGTTATGAGGACCCAACTGT+TGG + chr7_2:11655467-11655486 Msa1048980:three_prime_UTR 50.0%
!!! CTGTTTTTGTCCTCTCCCCT+TGG + chr7_2:11655630-11655649 Msa1048980:three_prime_UTR 50.0%
! GGAGTGGTTTCGTCGGTGTT+AGG - chr7_2:11649103-11649122 None:intergenic 55.0%
CTGACAAGCGCATCCATAGC+AGG - chr7_2:11649361-11649380 None:intergenic 55.0%
CTGCTATGGATGCGCTTGTC+AGG + chr7_2:11649359-11649378 Msa1048980:CDS 55.0%
GCTGTCTGTGTCTGTAACGG+TGG + chr7_2:11650187-11650206 Msa1048980:intron 55.0%
GCTGTCTGTGTCTGTAACGG+TGG + chr7_2:11650187-11650206 Msa1048980:intron 55.0%
TCAGGTGGATGGAGGGGATT+TGG + chr7_2:11650525-11650544 Msa1048980:intron 55.0%
GGGTGTGTGATTGGGAAAGG+TGG + chr7_2:11650583-11650602 Msa1048980:CDS 55.0%
GTGAGACTGGTGCGCAGATT+AGG + chr7_2:11650629-11650648 Msa1048980:CDS 55.0%
TGCAGTTCCTGGGGTGTATG+CGG + chr7_2:11651804-11651823 Msa1048980:CDS 55.0%
ATGGGAATGGCTCCGATTGG+TGG + chr7_2:11651868-11651887 Msa1048980:CDS 55.0%
!! GCTCCGATTGGTGGTGGTTA+TGG + chr7_2:11651877-11651896 Msa1048980:CDS 55.0%
CCCCCATAACCACCACCAAT+CGG - chr7_2:11651883-11651902 None:intergenic 55.0%
!! CCGATTGGTGGTGGTTATGG+GGG + chr7_2:11651880-11651899 Msa1048980:CDS 55.0%
!! CGATTGGTGGTGGTTATGGG+GGG + chr7_2:11651881-11651900 Msa1048980:CDS 55.0%
GTCCATGTATCCGGGCTCAA+GGG + chr7_2:11651933-11651952 Msa1048980:CDS 55.0%
ATCCCTTGAGCCCGGATACA+TGG - chr7_2:11651938-11651957 None:intergenic 55.0%
TATCCGGGCTCAAGGGATGA+AGG + chr7_2:11651940-11651959 Msa1048980:CDS 55.0%
GAACCTTCATCCCTTGAGCC+CGG - chr7_2:11651946-11651965 None:intergenic 55.0%
! GGTGTTATAGGTAAGGGCGG+TGG + chr7_2:11652015-11652034 Msa1048980:CDS 55.0%
! CAGCTGTGCTTTTGCAACCC+CGG + chr7_2:11652295-11652314 Msa1048980:CDS 55.0%
GATGGAAGACGACATGGACG+TGG + chr7_2:11652796-11652815 Msa1048980:CDS 55.0%
CTTGGTCGAGGTGGTCCTTA+TGG + chr7_2:11653012-11653031 Msa1048980:CDS 55.0%
! TGTCTGGTGGTGTATCTCGG+AGG + chr7_2:11653264-11653283 Msa1048980:CDS 55.0%
GGGGAAGGGAAAGGCAACAA+AGG - chr7_2:11653469-11653488 None:intergenic 55.0%
CTCAGCTGTTTGGATGGGGA+AGG - chr7_2:11653484-11653503 None:intergenic 55.0%
GACTGTACAGCCATCCTGGA+CGG + chr7_2:11654617-11654636 Msa1048980:three_prime_UTR 55.0%
ACATTGCAGACCAAGGGGAG+AGG - chr7_2:11655643-11655662 None:intergenic 55.0%
ATCGGCAGCATCATTGGCCG+CGG + chr7_2:11649187-11649206 Msa1048980:CDS 60.0%
TCAAAGCGCAAAGCGGCAGC+CGG - chr7_2:11650669-11650688 None:intergenic 60.0%
GTATGCGGCCGGTGGTTCAA+TGG + chr7_2:11651819-11651838 Msa1048980:CDS 60.0%
GGAATGGCTCCGATTGGTGG+TGG + chr7_2:11651871-11651890 Msa1048980:CDS 60.0%
GGTCCATGTATCCGGGCTCA+AGG + chr7_2:11651932-11651951 Msa1048980:CDS 60.0%
TCTGGTCCTTCTGGCGAAGC+AGG - chr7_2:11652754-11652773 None:intergenic 60.0%
GCTTCGCCAGAAGGACCAGA+TGG + chr7_2:11652754-11652773 Msa1048980:CDS 60.0%
GGAAGACGACATGGACGTGG+TGG + chr7_2:11652799-11652818 Msa1048980:CDS 60.0%
CATATGCGGCAGCTTGGTCG+AGG + chr7_2:11653000-11653019 Msa1048980:intron 60.0%
! AAACCTTGGTGGGTCCCTGC+AGG + chr7_2:11653304-11653323 Msa1048980:exon 60.0%
!! CTGGGTAGAGGCGTCAAGGT+GGG - chr7_2:11653577-11653596 None:intergenic 60.0%
!! ACTGGGTAGAGGCGTCAAGG+TGG - chr7_2:11653578-11653597 None:intergenic 60.0%
!! GTCACTGGGTAGAGGCGTCA+AGG - chr7_2:11653581-11653600 None:intergenic 60.0%
GTTTCACGATCTCGCCGCCG+CGG - chr7_2:11649207-11649226 None:intergenic 65.0%
GTTCCTGGGGTGTATGCGGC+CGG + chr7_2:11651808-11651827 Msa1048980:CDS 65.0%
TGCGGCCGGTGGTTCAATGG+TGG + chr7_2:11651822-11651841 Msa1048980:CDS 65.0%
GCGGCCGGTGGTTCAATGGT+GGG + chr7_2:11651823-11651842 Msa1048980:CDS 65.0%
GAGCCCGGATACATGGACCG+TGG - chr7_2:11651931-11651950 None:intergenic 65.0%
ATGCGGCAGCTTGGTCGAGG+TGG + chr7_2:11653003-11653022 Msa1048980:intron 65.0%
CTACCTGCAGGGACCCACCA+AGG - chr7_2:11653310-11653329 None:intergenic 65.0%
GGCAGCATCATTGGCCGCGG+CGG + chr7_2:11649190-11649209 Msa1048980:CDS 70.0%
CCACCGGCCGCATACACCCC+AGG - chr7_2:11651814-11651833 None:intergenic 75.0%
CCTGGGGTGTATGCGGCCGG+TGG + chr7_2:11651811-11651830 Msa1048980:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 11648921 11655833 11648921 ID=Msa1048980;Name=Msa1048980
chr7_2 mRNA 11648921 11655833 11648921 ID=Msa1048980-mRNA-1;Parent=Msa1048980;Name=Msa1048980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=29|0.85|0.87|1|0.85|0.75|8|2356|572
chr7_2 exon 11648921 11649447 11648921 ID=Msa1048980-mRNA-1:exon:2930;Parent=Msa1048980-mRNA-1
chr7_2 exon 11650580 11650708 11650580 ID=Msa1048980-mRNA-1:exon:2931;Parent=Msa1048980-mRNA-1
chr7_2 exon 11651709 11652137 11651709 ID=Msa1048980-mRNA-1:exon:2932;Parent=Msa1048980-mRNA-1
chr7_2 exon 11652261 11652518 11652261 ID=Msa1048980-mRNA-1:exon:2933;Parent=Msa1048980-mRNA-1
chr7_2 exon 11652628 11652900 11652628 ID=Msa1048980-mRNA-1:exon:2934;Parent=Msa1048980-mRNA-1
chr7_2 exon 11653012 11653076 11653012 ID=Msa1048980-mRNA-1:exon:2935;Parent=Msa1048980-mRNA-1
chr7_2 exon 11653238 11653325 11653238 ID=Msa1048980-mRNA-1:exon:2936;Parent=Msa1048980-mRNA-1
chr7_2 exon 11653499 11655833 11653499 ID=Msa1048980-mRNA-1:exon:2937;Parent=Msa1048980-mRNA-1
chr7_2 five_prime_UTR 11648921 11648949 11648921 ID=Msa1048980-mRNA-1:five_prime_utr;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11648950 11649447 11648950 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11650580 11650708 11650580 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11651709 11652137 11651709 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11652261 11652518 11652261 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11652628 11652900 11652628 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11653012 11653076 11653012 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 CDS 11653238 11653304 11653238 ID=Msa1048980-mRNA-1:cds;Parent=Msa1048980-mRNA-1
chr7_2 three_prime_UTR 11653305 11653325 11653305 ID=Msa1048980-mRNA-1:three_prime_utr;Parent=Msa1048980-mRNA-1
chr7_2 three_prime_UTR 11653499 11655833 11653499 ID=Msa1048980-mRNA-1:three_prime_utr;Parent=Msa1048980-mRNA-1
Gene Sequence

>Msa1048980

ATGTTAGATAGACAAAACCCTAAACTCACAATTCACAAAACACAATTCTCACGATTCACAATGGCTGGTCAAAGAACATCCTACGGCAACAAACGTTCACACTCACACAACAGCGTTGATGACAACAGAACCAACAACAAACGCCGTAACCCTAACACCGACGAAACCACTCCAAGAGACACATTTCACATAACTCAAGACGACACCGTTTACCGTTACCTTTGTCCGGTTCGCAAAATCGGCAGCATCATTGGCCGCGGCGGCGAGATCGTGAAACAACTCCGTCTTGATACGAAGGCGAAGATCCGAATTGGTGAAACTGTTCCTGGTTGTGATGAGCGTGTTGTTACGGTTTATAGTGTTTCTGATGAATCGAATGATTTTGAAGATTCTGGTGAGTTTATGTGTCCTGCTATGGATGCGCTTGTCAGGATTCATCAGAAGGTGATTGCTGAGGATTTGCGTGGTGGTGAAGATGAAGATGTTGATATGGAGAAGATTGGGTGTGTGATTGGGAAAGGTGGGCAGATTGTTCAGAATATAAGGAGTGAGACTGGTGCGCAGATTAGGATTCTTAAGGATGACCGGCTGCCGCTTTGCGCTTTGAACTCTGACGAGCTTGTTCAGATCTCTGGTGAGATTGCTGTTGTGAAAAAGGCTCTGATTCAAGTTGCGGCACGGCTTCATGACAACCCTTCACGTACTCAACATTTGCTTACTTCTGCAGTTCCTGGGGTGTATGCGGCCGGTGGTTCAATGGTGGGTTCTCATGGTGGGGCTCCAATTATGGGAATGGCTCCGATTGGTGGTGGTTATGGGGGGTATAAAGGTGATGTTGGAGACTATCCACGGTCCATGTATCCGGGCTCAAGGGATGAAGGTTCTCCGAAGGAGTTTTCAGTCCGATTTGTTTGTCCAACTGCTAACATTGGAGGTGTTATAGGTAAGGGCGGTGGTATAATAAATCAAATTAGGCAGGATTCTGGGGCAAATATCAAGGTTGATAGTTCGGCAACTGAAGGAGATGACTGCTTAATAGCCATTTCGGCGAGAGAGTTCTTTGAGGATTCATTCTCCGCAACAATTGAAGCAGCTGTGCTTTTGCAACCCCGGTGCAGTGAGAAAGTTGAAAGAGATTCTGGTATTCTCTCTTTCACTAGCCGGTTACTGGTGTCAAGCTCTCGAATTGGTTGCCTTATTGGTAAAGGAGGATCAATCATTACTGAGATGAGAAGGCTTACAAAAGCTAACATCCGCATCCTATCTAAGGAGGATCTCCCTAAAATTGCAACTGAAGATGATGAAATGGTGCAGATTTCGGGGGAACTAGATATTGCCAAGGACGCTCTTGTGCAAGTACTTACCCGGCTGAGAGCAAATCTTTTTGATAAGGAGCGTTCTGTCTCATCATTGCTTCCACCAGTACTTGCATATCTTCCTGCTTCGCCAGAAGGACCAGATGGTTTCAACTATGAAGGTAGAGATGGAAGACGACATGGACGTGGTGGCTATTCTTATTCTGATGGCTATGGAGGCTCAAGTGATTTTGCATCTGGCGACGGTTATGGAAACTATGGAAGTTCACAGCTTGGTCGAGGTGGTCCTTATGGAGCTTATGGAAGTTATGCTACGGAACGGACTAGTACTTCTGGATTGTCTGATAGATTGTCCGACAGATTGTCTGGTGGTGTATCTCGGAGGAGAAACCATGGTTACTAA
Protein sequence

>Msa1048980

MLDRQNPKLTIHKTQFSRFTMAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGGEDEDVDMEKIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVYAAGGSMVGSHGGAPIMGMAPIGGGYGGYKGDVGDYPRSMYPGSRDEGSPKEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISAREFFEDSFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALVQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGPDGFNYEGRDGRRHGRGGYSYSDGYGGSSDFASGDGYGNYGSSQLGRGGPYGAYGSYATERTSTSGLSDRLSDRLSGGVSRRRNHGY*