AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100780 MtrunA17_Chr7g0217681 97.198 571 14 1 1 569 1 571 0.0 1113
Msa1100780 MtrunA17_Chr6g0453421 68.237 573 158 10 1 569 1 553 0.0 691
Msa1100780 MtrunA17_Chr2g0285771 32.423 549 303 16 21 524 22 547 2.61e-72 243
Msa1100780 MtrunA17_Chr2g0285771 26.149 348 199 8 47 364 311 630 4.15e-26 112
Msa1100780 MtrunA17_Chr3g0140741 34.623 491 232 11 27 459 15 474 7.07e-68 232
Msa1100780 MtrunA17_Chr4g0049801 34.802 454 248 11 32 459 4 435 1.62e-64 222
Msa1100780 MtrunA17_Chr4g0049801 29.863 365 178 14 13 329 242 576 1.36e-26 114
Msa1100780 MtrunA17_Chr8g0376551 31.346 587 304 20 23 553 26 569 1.92e-60 211
Msa1100780 MtrunA17_Chr8g0376551 27.778 324 175 10 47 339 313 608 1.32e-25 111
Msa1100780 MtrunA17_Chr4g0002241 31.481 432 239 12 42 464 9 392 5.52e-53 190
Msa1100780 MtrunA17_Chr3g0127051 28.571 434 279 9 49 459 63 488 2.97e-45 169
Msa1100780 MtrunA17_Chr3g0127051 30.045 223 124 7 3 225 293 483 2.48e-20 95.1
Msa1100780 MtrunA17_Chr3g0127051 35.263 190 98 6 288 455 53 239 3.81e-19 91.3
Msa1100780 MtrunA17_Chr2g0279641 29.376 497 266 18 25 459 27 500 3.91e-42 161
Msa1100780 MtrunA17_Chr5g0412061 29.505 444 285 10 39 471 29 455 9.97e-40 153
Msa1100780 MtrunA17_Chr5g0412061 25.157 318 209 7 50 351 276 580 1.34e-19 92.4
Msa1100780 MtrunA17_Chr7g0250921 50.888 169 48 5 358 526 12 145 1.18e-32 124
Msa1100780 MtrunA17_Chr7g0249721 32.979 188 109 4 48 231 99 273 1.24e-24 104
Msa1100780 MtrunA17_Chr7g0249721 30.928 194 121 4 299 483 103 292 1.61e-13 71.6
Msa1100780 MtrunA17_Chr1g0184511 32.569 218 132 5 10 225 124 328 5.51e-23 102
Msa1100780 MtrunA17_Chr1g0184511 30.508 177 116 2 291 461 160 335 3.82e-15 78.6
Msa1100780 MtrunA17_Chr7g0274301 25.816 337 177 10 48 334 114 427 6.06e-22 99.4
Msa1100780 MtrunA17_Chr7g0274301 25.281 178 132 1 285 461 104 281 1.58e-15 79.3
Msa1100780 MtrunA17_Chr2g0298721 33.520 179 107 2 48 226 69 235 9.02e-21 95.5
Msa1100780 MtrunA17_Chr2g0298721 30.729 192 122 2 285 470 59 245 1.23e-17 85.9
Msa1100780 MtrunA17_Chr4g0071791 34.694 196 115 3 30 225 26 208 2.03e-20 94.0
Msa1100780 MtrunA17_Chr4g0071791 31.217 189 119 2 288 470 36 219 3.99e-15 77.8
Msa1100780 MtrunA17_Chr1g0197441 24.503 302 169 11 46 331 33 291 2.84e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100780 AT5G15270.3 60.000 540 191 12 11 548 17 533 0.0 618
Msa1100780 AT5G15270.2 60.038 528 186 12 11 536 17 521 0.0 605
Msa1100780 AT5G15270.1 60.038 528 186 12 11 536 17 521 0.0 605
Msa1100780 AT1G14170.3 51.158 475 188 9 26 492 25 463 6.97e-141 417
Msa1100780 AT1G14170.1 51.422 457 182 7 44 492 14 438 8.71e-140 413
Msa1100780 AT1G14170.2 51.656 453 179 7 48 492 10 430 5.54e-139 410
Msa1100780 AT5G46190.1 35.358 461 244 12 49 471 44 488 3.61e-71 241
Msa1100780 AT5G46190.1 29.141 326 155 10 52 334 320 612 2.79e-26 114
Msa1100780 AT5G46190.4 35.358 461 244 12 49 471 44 488 3.61e-71 241
Msa1100780 AT5G46190.4 29.141 326 155 10 52 334 320 612 2.79e-26 114
Msa1100780 AT5G46190.3 35.358 461 244 12 49 471 44 488 3.61e-71 241
Msa1100780 AT5G46190.3 29.141 326 155 10 52 334 320 612 2.79e-26 114
Msa1100780 AT5G46190.2 35.408 466 245 13 46 471 39 488 2.35e-70 239
Msa1100780 AT5G46190.2 28.571 315 149 10 52 323 320 601 7.52e-24 106
Msa1100780 AT4G18375.3 30.796 565 300 21 23 537 7 530 8.92e-64 218
Msa1100780 AT4G18375.2 30.973 565 299 21 23 537 7 530 4.49e-63 218
Msa1100780 AT4G18375.2 27.794 349 170 13 47 373 310 598 6.12e-24 106
Msa1100780 AT1G51580.1 32.045 440 245 12 51 459 21 437 4.75e-55 196
Msa1100780 AT1G51580.1 28.283 198 121 5 30 227 258 434 4.87e-21 97.4
Msa1100780 AT5G53060.3 30.684 453 263 12 38 461 57 487 7.00e-52 187
Msa1100780 AT5G53060.1 30.684 453 263 12 38 461 57 487 5.19e-51 186
Msa1100780 AT2G03110.2 50.327 153 72 3 82 231 1 152 5.58e-39 140
Msa1100780 AT2G03110.1 50.327 153 72 3 82 231 1 152 5.58e-39 140
Msa1100780 AT2G03110.3 50.327 153 72 3 82 231 1 152 5.58e-39 140
Msa1100780 AT2G22600.1 27.897 466 286 13 26 462 2 446 1.28e-32 133
Msa1100780 AT4G18375.1 33.688 282 130 11 264 537 85 317 1.92e-29 120
Msa1100780 AT4G18375.1 27.794 349 170 13 47 373 97 385 5.44e-25 107
Msa1100780 AT5G64390.3 36.872 179 109 1 285 459 441 619 6.82e-27 116
Msa1100780 AT5G64390.3 31.304 230 140 4 1 228 404 617 1.39e-26 115
Msa1100780 AT5G64390.3 32.461 191 99 3 51 227 49 223 6.41e-23 103
Msa1100780 AT5G64390.3 33.152 184 79 6 297 450 48 217 3.47e-14 76.3
Msa1100780 AT5G64390.2 36.872 179 109 1 285 459 441 619 7.10e-27 116
Msa1100780 AT5G64390.2 31.304 230 140 4 1 228 404 617 1.25e-26 115
Msa1100780 AT5G64390.2 32.461 191 99 3 51 227 49 223 6.49e-23 103
Msa1100780 AT5G64390.2 33.152 184 79 6 297 450 48 217 3.53e-14 76.3
Msa1100780 AT5G64390.1 36.872 179 109 1 285 459 441 619 7.19e-27 116
Msa1100780 AT5G64390.1 31.304 230 140 4 1 228 404 617 1.63e-26 115
Msa1100780 AT5G64390.1 32.461 191 99 3 51 227 49 223 6.95e-23 103
Msa1100780 AT5G64390.1 33.152 184 79 6 297 450 48 217 4.04e-14 76.3
Msa1100780 AT5G09560.1 26.151 543 287 21 51 509 32 544 1.62e-24 108
Msa1100780 AT5G09560.1 28.440 218 124 6 16 228 279 469 1.33e-16 83.6
Msa1100780 AT3G04610.3 33.146 178 105 2 48 225 162 325 1.08e-23 105
Msa1100780 AT3G04610.3 27.528 178 125 1 288 461 155 332 1.43e-16 83.6
Msa1100780 AT3G04610.4 33.146 178 105 2 48 225 162 325 1.08e-23 105
Msa1100780 AT3G04610.4 27.528 178 125 1 288 461 155 332 1.43e-16 83.6
Msa1100780 AT3G04610.2 34.270 178 103 3 48 225 186 349 1.39e-23 105
Msa1100780 AT3G04610.2 27.528 178 125 1 288 461 179 356 1.87e-16 83.2
Msa1100780 AT3G04610.1 34.270 178 103 3 48 225 186 349 1.39e-23 105
Msa1100780 AT3G04610.1 27.528 178 125 1 288 461 179 356 1.87e-16 83.2
Msa1100780 AT4G26000.1 32.022 178 109 2 48 225 73 238 1.16e-21 99.0
Msa1100780 AT4G26000.1 32.222 180 114 3 288 460 66 244 4.79e-15 78.2
Msa1100780 AT5G04430.1 25.974 308 169 12 28 331 17 269 2.49e-11 65.5
Msa1100780 AT5G04430.2 26.688 311 184 14 28 331 17 290 4.73e-11 65.1

Find 318 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGAATTGGTTGCCTTAT+TGG 0.136643 7_3:-31178896 Msa1100780:CDS
ATGGAACTTGTTCAAGTATT+TGG 0.144742 7_3:-31175614 Msa1100780:three_prime_UTR
TCATGGTGGGGCTCCAATTA+TGG 0.148669 7_3:-31179431 Msa1100780:CDS
CTTTGAGATTCCTTGGATTA+TGG 0.168812 7_3:-31175633 Msa1100780:three_prime_UTR
ACAATTTCTGTTAGAATCTA+TGG 0.177846 7_3:-31177007 Msa1100780:three_prime_UTR
CTCTTTCACTAGCCGGTTAC+TGG 0.187699 7_3:-31178927 Msa1100780:CDS
TTGCTTACTTCTGCAGTTCC+TGG 0.200050 7_3:-31179487 Msa1100780:CDS
ACAATTTCCGTTAGAATCTA+TGG 0.209065 7_3:-31176969 Msa1100780:three_prime_UTR
CAGTTTAGGCAGTAGGCTTC+AGG 0.210067 7_3:+31177765 None:intergenic
CCGTTAGAATCTATGGATAA+TGG 0.220717 7_3:-31176962 Msa1100780:three_prime_UTR
CTGTTAGAATCTATGGATAA+TGG 0.227331 7_3:-31177000 Msa1100780:three_prime_UTR
CAGAAATTGTTTGGGTTGTT+TGG 0.236028 7_3:+31177020 None:intergenic
GTTTGTGAATTGTGACTTTA+GGG 0.245122 7_3:+31182207 None:intergenic
ATCGGAGCCATTCCCATAAT+TGG 0.245633 7_3:+31179418 None:intergenic
CAAAATAGTGTGTGTTAAAA+TGG 0.247286 7_3:+31175986 None:intergenic
TTTGAATAATATAATGATAT+TGG 0.256594 7_3:-31177393 Msa1100780:three_prime_UTR
ATTAGTCTTGCTCTATGTTT+AGG 0.262619 7_3:-31175692 Msa1100780:three_prime_UTR
GGAGTGGTTTCGTCGGTGTT+AGG 0.267122 7_3:+31182075 None:intergenic
AATCAAATTAGGCAGGATTC+TGG 0.274868 7_3:-31179235 Msa1100780:CDS
TGTTTGTGAATTGTGACTTT+AGG 0.278298 7_3:+31182206 None:intergenic
CTTGGTCGAGGTGGTCCTTA+TGG 0.280832 7_3:-31178268 Msa1100780:CDS
GCTTAGGAAGTAAGGTAAAA+TGG 0.285966 7_3:+31177604 None:intergenic
ATCTGACCACTATCTTATAT+TGG 0.286139 7_3:-31177261 Msa1100780:three_prime_UTR
CATATAAAATGTGTGCATAT+TGG 0.287484 7_3:-31176052 Msa1100780:three_prime_UTR
CGCAAAATCGGAAGCATCAT+TGG 0.292279 7_3:-31181994 Msa1100780:CDS
GTTATTTATCATTGATCAAT+AGG 0.292431 7_3:-31175906 Msa1100780:three_prime_UTR
TTGCTCTATGTTTAGGTTGT+TGG 0.302791 7_3:-31175685 Msa1100780:three_prime_UTR
GCTAACATTGGAGGTGTTAT+AGG 0.305964 7_3:-31179277 Msa1100780:CDS
TCAGGTGGATGGAGGGGATT+TGG 0.309548 7_3:-31180750 Msa1100780:intron
TTGATCCTCCTTTACCAATA+AGG 0.310702 7_3:+31178882 None:intergenic
TGTTCAAGTATTTGGAGATA+TGG 0.315324 7_3:-31175606 Msa1100780:three_prime_UTR
GAATGCAGTTGGATTTCTTC+AGG 0.316192 7_3:-31175516 Msa1100780:three_prime_UTR
AGATTCTAACAGAAATTGTT+TGG 0.317530 7_3:+31177011 None:intergenic
CGTTAGAATCTATGGATAAT+GGG 0.317951 7_3:-31176961 Msa1100780:three_prime_UTR
TTTGCATCTGGCGACGGTTA+TGG 0.318019 7_3:-31178421 Msa1100780:CDS
CAACCTTGATGCCTCTATCT+AGG 0.320441 7_3:-31177664 Msa1100780:three_prime_UTR
GAGAAAGTTGAAAGAGATTC+TGG 0.321272 7_3:-31178956 Msa1100780:CDS
GGCAGATTGTTCAGAATATA+AGG 0.321391 7_3:-31180670 Msa1100780:CDS
TGAGATTGCTGTTGTGAAAA+AGG 0.325029 7_3:-31179563 Msa1100780:CDS
AAATGGCAACGCTAGCTAAA+TGG 0.327704 7_3:+31176082 None:intergenic
ACGGAACGGACTAGTACTTC+TGG 0.328930 7_3:-31178226 Msa1100780:CDS
TGCTTACTTCTGCAGTTCCT+GGG 0.334858 7_3:-31179486 Msa1100780:CDS
TGCAAAATATTGTGAAATAA+TGG 0.336117 7_3:-31176693 Msa1100780:three_prime_UTR
TTGAAACCATCTGGTCCTTC+TGG 0.338732 7_3:+31178520 None:intergenic
TGTTAGAATCTATGGATAAT+GGG 0.347034 7_3:-31176999 Msa1100780:three_prime_UTR
TAAGAGATTGAGGGCCTGTT+TGG 0.348985 7_3:-31176356 Msa1100780:three_prime_UTR
GGTGGTCCTTATGGAGCTTA+TGG 0.351103 7_3:-31178259 Msa1100780:CDS
GAAGATTACAAAAGGTCATT+TGG 0.353640 7_3:-31175460 Msa1100780:three_prime_UTR
CTTTGCCCTGTTCGCAAAAT+CGG 0.354517 7_3:-31182006 Msa1100780:CDS
GAATTCTGATGAGCTTGTTC+AGG 0.354751 7_3:-31180588 Msa1100780:intron
TCGTTGGTGTTTAGTTTGAA+TGG 0.355963 7_3:-31177149 Msa1100780:three_prime_UTR
CATGCCACTTTGAGATTCCT+TGG 0.358513 7_3:-31175640 Msa1100780:three_prime_UTR
TTAGTTTGAATGGGCTAGTC+TGG 0.362522 7_3:-31177139 Msa1100780:three_prime_UTR
GCTCCGATTGGTGGTGGTTA+TGG 0.363624 7_3:-31179403 Msa1100780:CDS
CTATCCACGGTCCATGTATC+CGG 0.368979 7_3:-31179356 Msa1100780:CDS
CTGAAGCCTACTGCCTAAAC+TGG 0.371136 7_3:-31177764 Msa1100780:three_prime_UTR
TTCAATAGTCTCCACATGTT+TGG 0.377132 7_3:+31177638 None:intergenic
CAATGGTGGGTTCTCATGGT+GGG 0.382167 7_3:-31179444 Msa1100780:CDS
TAGGGAGATCCTCCTTAGAT+AGG 0.383114 7_3:+31178816 None:intergenic
TAACATCCGCATCCTATCTA+AGG 0.386726 7_3:-31178828 Msa1100780:CDS
CATGGTGGGGCTCCAATTAT+GGG 0.388437 7_3:-31179430 Msa1100780:CDS
GGTGGTTATGGAGGGTATAA+AGG 0.389407 7_3:-31179391 Msa1100780:CDS
GTGGTATAATAAATCAAATT+AGG 0.394131 7_3:-31179246 Msa1100780:CDS
ATCAAATTAGGCAGGATTCT+GGG 0.396448 7_3:-31179234 Msa1100780:CDS
GGCTTAGCCACATCTAGTTA+AGG 0.398310 7_3:-31176426 Msa1100780:three_prime_UTR
AACGGTAAACGGTGTCGTCT+TGG 0.400100 7_3:+31182031 None:intergenic
CCCAGTGACTGACAAATTCA+TGG 0.406816 7_3:-31177688 Msa1100780:three_prime_UTR
TGACTGCTTAATAGCCATTT+CGG 0.407826 7_3:-31179173 Msa1100780:CDS
TCATAAACTCAGGGTCCGTT+TGG 0.409486 7_3:+31176134 None:intergenic
TGAAGATGAAGACGTTGATA+TGG 0.412280 7_3:-31181755 Msa1100780:CDS
AAAATTGTATATTCATAAGT+TGG 0.414004 7_3:-31176252 Msa1100780:three_prime_UTR
GCTTTAAATAGCAGCGATAT+CGG 0.415490 7_3:-31176774 Msa1100780:intron
CGTTGGTGTTTAGTTTGAAT+GGG 0.415931 7_3:-31177148 Msa1100780:three_prime_UTR
ACGGTAAACGGTGTCGTCTT+GGG 0.416434 7_3:+31182032 None:intergenic
TGCATATTGGATTGTCCTCT+AGG 0.416941 7_3:-31176039 Msa1100780:three_prime_UTR
GTATGCGGTCGGTGGTTCAA+TGG 0.418238 7_3:-31179461 Msa1100780:CDS
GCTATTTAAAACAACTGCTC+TGG 0.418782 7_3:+31176871 None:intergenic
GAGTGGTTTCGTCGGTGTTA+GGG 0.420306 7_3:+31182076 None:intergenic
ATATTTCATCATTCGATCAC+TGG 0.420864 7_3:-31175939 Msa1100780:three_prime_UTR
GGCGACGGTTATGGAAACTA+TGG 0.421841 7_3:-31178412 Msa1100780:CDS
TTCTACCTCTCTCGCCGAAA+TGG 0.422570 7_3:+31179159 None:intergenic
CTGCTATGGATGCGCTTGTC+AGG 0.423616 7_3:-31181816 Msa1100780:CDS
TGCACAGATTAGGATTCTTA+AGG 0.423719 7_3:-31180636 Msa1100780:CDS
GCCATGAATTTGTCAGTCAC+TGG 0.424683 7_3:+31177687 None:intergenic
TTTCGTCGGTGTTAGGGTTA+CGG 0.427146 7_3:+31182082 None:intergenic
GATCAGATTGGGTGTGTGAT+TGG 0.428636 7_3:-31180701 Msa1100780:CDS
GCTTAGCCACATCTAGTTAA+GGG 0.430969 7_3:-31176425 Msa1100780:three_prime_UTR
AACCATGGTTACTAAAACCT+TGG 0.433601 7_3:-31177990 Msa1100780:exon
GTTAGGGTTACGGCGTTTGT+TGG 0.434599 7_3:+31182092 None:intergenic
GAATGAGACAGGTAATCTAT+TGG 0.438851 7_3:-31175494 Msa1100780:three_prime_UTR
GGAGGGTATAAAGGTGATGT+TGG 0.439030 7_3:-31179382 Msa1100780:CDS
TATAACCAGAGGAGCCGAAC+TGG 0.439048 7_3:+31177202 None:intergenic
GGGTGTGTGATTGGGAAAGG+TGG 0.439775 7_3:-31180692 Msa1100780:CDS
TCTGGTCCTTCTGGCGAAGC+AGG 0.442517 7_3:+31178529 None:intergenic
CGAATCGGTGAAACTGTTCC+TGG 0.442677 7_3:-31181919 Msa1100780:CDS
GATTCTAACAGAAATTGTTT+GGG 0.442973 7_3:+31177012 None:intergenic
GTGAGACCGGTGCACAGATT+AGG 0.445354 7_3:-31180646 Msa1100780:CDS
CAATGTTCATTGAATGCAGT+TGG 0.445821 7_3:-31175527 Msa1100780:three_prime_UTR
TTCAACTTTCTCACTGCACC+GGG 0.446932 7_3:+31178967 None:intergenic
TCCTGGACGGCTATGATGTT+AGG 0.449333 7_3:-31176566 Msa1100780:three_prime_UTR
TATTATTTATAAATTTGTTA+AGG 0.449726 7_3:+31176215 None:intergenic
ATCCCTTGAGCCCGGATACA+TGG 0.451086 7_3:+31179345 None:intergenic
AACCTTGATGCCTCTATCTA+GGG 0.451615 7_3:-31177663 Msa1100780:three_prime_UTR
TACTTGCACAAGAGCGTCCT+TGG 0.454929 7_3:+31178630 None:intergenic
CGTCTTCCAGTTTAGGCAGT+AGG 0.458624 7_3:+31177758 None:intergenic
CCTTCATAGTTGAAACCATC+TGG 0.458835 7_3:+31178511 None:intergenic
TATTCTTATTCTGATGGCTA+TGG 0.459228 7_3:-31178457 Msa1100780:CDS
CTAAGGCTGTACAGCCATCC+TGG 0.459243 7_3:-31176583 Msa1100780:three_prime_UTR
TCGCTGAATCTGCAGATCTC+TGG 0.459290 7_3:-31179586 Msa1100780:intron
AAAACAAGCTTAATCCAAAC+AGG 0.461819 7_3:+31176342 None:intergenic
GACAGGTAATCTATTGGATT+AGG 0.465622 7_3:-31175488 Msa1100780:three_prime_UTR
GTTATGTGAAATGTGTCTCT+TGG 0.468813 7_3:+31182054 None:intergenic
TGAGTTTATGTGTCCTGCTA+TGG 0.469447 7_3:-31181830 Msa1100780:CDS
AGTTTAGGCAGTAGGCTTCA+GGG 0.470110 7_3:+31177766 None:intergenic
GTATTCTCTCTTTCACTAGC+CGG 0.470671 7_3:-31178934 Msa1100780:CDS
AAATATCAAGGTTGATAGTT+CGG 0.471588 7_3:-31179209 Msa1100780:CDS
GTTCGCAAGCTTAGGAAGTA+AGG 0.474273 7_3:+31177596 None:intergenic
TATGGTAAATAGTTGAGATT+CGG 0.474547 7_3:-31175588 Msa1100780:three_prime_UTR
GGTTCAATGGTGGGTTCTCA+TGG 0.474828 7_3:-31179448 Msa1100780:CDS
TTCTCACAATTCACAATGGC+TGG 0.477989 7_3:-31182180 Msa1100780:exon
CATTGGAGGTGTTATAGGTA+AGG 0.479056 7_3:-31179272 Msa1100780:CDS
CGGAACGGACTAGTACTTCT+GGG 0.479809 7_3:-31178225 Msa1100780:intron
CCGATTGGTGGTGGTTATGG+AGG 0.480814 7_3:-31179400 Msa1100780:CDS
TGCAACTGAAGATGATGAAA+TGG 0.481672 7_3:-31178789 Msa1100780:CDS
TTCATCTCGTCTTCCAGTTT+AGG 0.485689 7_3:+31177751 None:intergenic
ATTTAACGCACAAGACTGTA+AGG 0.488292 7_3:+31177355 None:intergenic
TGAATACAAGATTGGTTCGT+TGG 0.490609 7_3:-31177165 Msa1100780:three_prime_UTR
TGTGTTTATGCAGTTCTTTG+AGG 0.490670 7_3:-31179032 Msa1100780:intron
ACAACTACGTCTTGATACTA+AGG 0.490919 7_3:-31181950 Msa1100780:CDS
ATTGGTTGCCTTATTGGTAA+AGG 0.491056 7_3:-31178890 Msa1100780:CDS
TTTCAACTTTCTCACTGCAC+CGG 0.491500 7_3:+31178966 None:intergenic
AGATAGTACAGGTATACAAC+TGG 0.491875 7_3:+31177473 None:intergenic
CTGGTGTCAAGCTCTCGAAT+TGG 0.492427 7_3:-31178908 Msa1100780:CDS
GAGAGCTTGACACCAGTAAC+CGG 0.492678 7_3:+31178915 None:intergenic
AGGGCAAAGGTAACGGTAAA+CGG 0.493030 7_3:+31182020 None:intergenic
AATGAAACTAAACACCGAAC+TGG 0.494714 7_3:-31176543 Msa1100780:three_prime_UTR
CTTGTGGCGTCTGATCAGAT+TGG 0.495578 7_3:-31180713 Msa1100780:CDS
GAGCACATGTTCGCAAGCTT+AGG 0.498749 7_3:+31177588 None:intergenic
CTTGTATATGTAAGAGATTG+AGG 0.500205 7_3:-31176366 Msa1100780:three_prime_UTR
TCTTATTCTGATGGCTATGG+AGG 0.500846 7_3:-31178454 Msa1100780:CDS
TTGTGATGAGCGTGTTGTTA+CGG 0.501109 7_3:-31181896 Msa1100780:CDS
ATCAGATTGGGTGTGTGATT+GGG 0.501919 7_3:-31180700 Msa1100780:CDS
AGGCCTTTGAAGATTACAAA+AGG 0.503037 7_3:-31175468 Msa1100780:three_prime_UTR
AAAGGCTCTGATTCAGGTTG+CGG 0.503958 7_3:-31179545 Msa1100780:CDS
TATAAGTACAAGAGGTTATG+AGG 0.504979 7_3:-31175730 Msa1100780:three_prime_UTR
CTCAATCTCTTACATATACA+AGG 0.508204 7_3:+31176367 None:intergenic
GATTTCTTCAGGAATGAGAC+AGG 0.508273 7_3:-31175505 Msa1100780:three_prime_UTR
GCGGTCGGTGGTTCAATGGT+GGG 0.509013 7_3:-31179457 Msa1100780:CDS
AGGGTTACGGCGTTTGTTGG+TGG 0.510030 7_3:+31182095 None:intergenic
TCAATGGTGGGTTCTCATGG+TGG 0.510611 7_3:-31179445 Msa1100780:CDS
TGCGGTCGGTGGTTCAATGG+TGG 0.511251 7_3:-31179458 Msa1100780:CDS
AGATTGTCCGACAGATTGTC+TGG 0.513148 7_3:-31178032 Msa1100780:CDS
CAAGACTAATATCCAACAGT+TGG 0.514667 7_3:+31175705 None:intergenic
CACAGCTGCTTCAATTGTTG+CGG 0.514880 7_3:+31179000 None:intergenic
GAATGGACTGAATACAAGAT+TGG 0.515824 7_3:-31177173 Msa1100780:three_prime_UTR
TTGTGGCGTCTGATCAGATT+GGG 0.517025 7_3:-31180712 Msa1100780:CDS
ATGTTTGGTCCCCTAGATAG+AGG 0.517490 7_3:+31177653 None:intergenic
GATTGTCTGGTGGTGTATCT+CGG 0.518577 7_3:-31178019 Msa1100780:CDS
TATAATAAATCAAATTAGGC+AGG 0.519067 7_3:-31179242 Msa1100780:CDS
TAGCAGTTGGACAAACAAAT+CGG 0.520156 7_3:+31179296 None:intergenic
AAATATACTTTGTATATGAC+TGG 0.522382 7_3:-31175419 Msa1100780:three_prime_UTR
GCAGGAAGATATGCAAGTAC+TGG 0.523882 7_3:+31178547 None:intergenic
AAACCTTGGTGGGTCCCTGC+AGG 0.524068 7_3:-31177976 Msa1100780:intron
CCAGATGGTTTCAACTATGA+AGG 0.524623 7_3:-31178511 Msa1100780:CDS
CATATGCGGCAGCTTGGTCG+AGG 0.527118 7_3:-31178280 Msa1100780:intron
AACTATACACCACACCAGTT+CGG 0.527690 7_3:+31176529 None:intergenic
GGTGGCTATTCTTATTCTGA+TGG 0.527717 7_3:-31178463 Msa1100780:CDS
CTCTACACAACAATGCTGTA+AGG 0.527950 7_3:+31176661 None:intergenic
TTGTATATGTAAGAGATTGA+GGG 0.528732 7_3:-31176365 Msa1100780:three_prime_UTR
ATGGGAATGGCTCCGATTGG+TGG 0.530538 7_3:-31179412 Msa1100780:CDS
TATCTTCCTGCTTCGCCAGA+AGG 0.531028 7_3:-31178535 Msa1100780:CDS
TCCTAACATCATAGCCGTCC+AGG 0.531222 7_3:+31176565 None:intergenic
TGCGAACAGGGCAAAGGTAA+CGG 0.532303 7_3:+31182013 None:intergenic
CAGAATGGTGCTGTTTAACA+TGG 0.532916 7_3:+31175799 None:intergenic
GCAAAACCAATATAAGATAG+TGG 0.533028 7_3:+31177255 None:intergenic
CCTCCATAACCACCACCAAT+CGG 0.537459 7_3:+31179400 None:intergenic
TATTTCATCATTCGATCACT+GGG 0.537759 7_3:-31175938 Msa1100780:three_prime_UTR
CTCTGGTTATATGAGCTGAA+TGG 0.538675 7_3:-31177190 Msa1100780:three_prime_UTR
TAACTTCCATAAGCTCCATA+AGG 0.538976 7_3:+31178253 None:intergenic
GTTTGTCCAACTGCTAACAT+TGG 0.542273 7_3:-31179289 Msa1100780:CDS
TAAATTTGAAAGACCTTGTG+TGG 0.543201 7_3:-31177337 Msa1100780:three_prime_UTR
GGTGTGTGATTGGGAAAGGT+GGG 0.544155 7_3:-31180691 Msa1100780:CDS
GGATTCTGGGGCAAATATCA+AGG 0.544315 7_3:-31179221 Msa1100780:CDS
TATCCACGGTCCATGTATCC+GGG 0.544857 7_3:-31179355 Msa1100780:CDS
TGTTTAACATGGCATTTATG+TGG 0.545748 7_3:+31175810 None:intergenic
CATCATTCGATCACTGGGAA+AGG 0.546009 7_3:-31175933 Msa1100780:three_prime_UTR
ATTGGGTGTGTGATTGGGAA+AGG 0.547162 7_3:-31180695 Msa1100780:CDS
CCATGAATTTGTCAGTCACT+GGG 0.547663 7_3:+31177688 None:intergenic
GTTCCTGGGGTGTATGCGGT+CGG 0.548847 7_3:-31179472 Msa1100780:CDS
TTAGGATTCTTAAGGATGAT+CGG 0.549307 7_3:-31180628 Msa1100780:CDS
AAGACTAATATCCAACAGTT+GGG 0.549472 7_3:+31175706 None:intergenic
TATCCGGGCTCAAGGGATGA+AGG 0.550864 7_3:-31179340 Msa1100780:CDS
ATCGGAAGCATCATTGGCCG+CGG 0.552394 7_3:-31181988 Msa1100780:CDS
TTCAACTATGAAGGTAGAGA+TGG 0.552487 7_3:-31178502 Msa1100780:CDS
TTGATTTATATAAATTGTGA+AGG 0.552775 7_3:-31176931 Msa1100780:three_prime_UTR
GTGAAATGTGTCTCTTGGAG+TGG 0.554448 7_3:+31182059 None:intergenic
CTGACAAGCGCATCCATAGC+AGG 0.554642 7_3:+31181817 None:intergenic
GCATATTGGATTGTCCTCTA+GGG 0.556453 7_3:-31176038 Msa1100780:three_prime_UTR
GTCTCTTGGAGTGGTTTCGT+CGG 0.557133 7_3:+31182068 None:intergenic
TGAAGACGTTGATATGGAGA+AGG 0.558240 7_3:-31181749 Msa1100780:intron
TCTACCTTTGAGGTCTAGCA+CGG 0.558308 7_3:-31176447 Msa1100780:three_prime_UTR
AATGGTGGGTTCTCATGGTG+GGG 0.558992 7_3:-31179443 Msa1100780:CDS
GAACCTTCATCCCTTGAGCC+CGG 0.559965 7_3:+31179337 None:intergenic
GGATGGAGGGGATTTGGTCA+CGG 0.560016 7_3:-31180744 Msa1100780:CDS
GGTTGCCTTATTGGTAAAGG+AGG 0.560805 7_3:-31178887 Msa1100780:CDS
TCAAATTAGGCAGGATTCTG+GGG 0.561605 7_3:-31179233 Msa1100780:CDS
GGAATGGCTCCGATTGGTGG+TGG 0.561692 7_3:-31179409 Msa1100780:CDS
TGGAAACTATGGAAGTTCAC+AGG 0.562268 7_3:-31178401 Msa1100780:intron
GCTTACTTCTGCAGTTCCTG+GGG 0.562545 7_3:-31179485 Msa1100780:CDS
CATGGTTACTAAAACCTTGG+TGG 0.562818 7_3:-31177987 Msa1100780:exon
ATTTGTCAGTCACTGGGTAG+AGG 0.566631 7_3:+31177694 None:intergenic
CGACAAAACAAAGATAGTAC+AGG 0.570158 7_3:+31177462 None:intergenic
GGTTATGAGGACCCAACTGT+TGG 0.571493 7_3:-31175717 Msa1100780:three_prime_UTR
CTCTGATGTTATCAGGTGGA+TGG 0.572368 7_3:-31180761 Msa1100780:intron
GTCCATGTATCCGGGCTCAA+GGG 0.574091 7_3:-31179347 Msa1100780:CDS
TGCAGTTCCTGGGGTGTATG+CGG 0.574727 7_3:-31179476 Msa1100780:CDS
ACACCTCCAATGTTAGCAGT+TGG 0.575469 7_3:+31179283 None:intergenic
CTCTTGTGCAAGTACTTACC+CGG 0.576314 7_3:-31178621 Msa1100780:CDS
GGCTGTACAGCCATCCTGGA+CGG 0.578390 7_3:-31176579 Msa1100780:three_prime_UTR
AATAGCCATTTCGGCGAGAG+AGG 0.578458 7_3:-31179164 Msa1100780:intron
TGTCCAACTGCTAACATTGG+AGG 0.579765 7_3:-31179286 Msa1100780:CDS
TCCCCTAGATAGAGGCATCA+AGG 0.580833 7_3:+31177661 None:intergenic
TACAGGTATACAACTGGCAA+AGG 0.581153 7_3:+31177479 None:intergenic
ACATGTCACATCATAAACTC+AGG 0.582005 7_3:+31176124 None:intergenic
CTGGGTAGAGGCGTCAAGGT+GGG 0.583814 7_3:+31177706 None:intergenic
GTCACTGGGTAGAGGCGTCA+AGG 0.585145 7_3:+31177702 None:intergenic
GGTCACGGCGAAATTGCTTG+TGG 0.585277 7_3:-31180729 Msa1100780:CDS
CTCTGATTCAGGTTGCGGCA+CGG 0.585528 7_3:-31179540 Msa1100780:CDS
GGTGTTATAGGTAAGGGCGG+TGG 0.586093 7_3:-31179265 Msa1100780:CDS
CTTACAGCATTGTTGTGTAG+AGG 0.586603 7_3:-31176660 Msa1100780:three_prime_UTR
TGATGTTATCAGGTGGATGG+AGG 0.586758 7_3:-31180758 Msa1100780:intron
CAATCATTACTGAGATGAGA+AGG 0.587009 7_3:-31178862 Msa1100780:CDS
CTAGATAGAGGCATCAAGGT+TGG 0.587204 7_3:+31177665 None:intergenic
ATAATCAATTAATCACAGAA+TGG 0.587487 7_3:+31175784 None:intergenic
AAGGGATGAAGGTTCTCCGA+TGG 0.587530 7_3:-31179329 Msa1100780:CDS
TTCGATCACTGGGAAAGGCT+AGG 0.587738 7_3:-31175928 Msa1100780:three_prime_UTR
TGGGGCTCCAATTATGGGAA+TGG 0.589051 7_3:-31179425 Msa1100780:CDS
ATTGGAGGTGTTATAGGTAA+GGG 0.591478 7_3:-31179271 Msa1100780:CDS
CGATTGGTGGTGGTTATGGA+GGG 0.591635 7_3:-31179399 Msa1100780:CDS
GGAAGATATGCAAGTACTGG+TGG 0.592745 7_3:+31178550 None:intergenic
GTTGATAGTTCGGCAACTGA+AGG 0.592881 7_3:-31179199 Msa1100780:CDS
GATGTTATCAGGTGGATGGA+GGG 0.594519 7_3:-31180757 Msa1100780:intron
ATGGTTACTAAAACCTTGGT+GGG 0.595179 7_3:-31177986 Msa1100780:exon
AGCAAATGTTGAGTACGTGA+AGG 0.595406 7_3:+31179505 None:intergenic
GTTAGTCGTATAAGTACAAG+AGG 0.595664 7_3:-31175738 Msa1100780:three_prime_UTR
CAGAATATAAGGAGTGAGAC+CGG 0.595890 7_3:-31180659 Msa1100780:CDS
ATCTGTCGTCGATCTACTGT+AGG 0.596009 7_3:-31176398 Msa1100780:three_prime_UTR
ACGTGTTCAGAAGACAGATA+AGG 0.596941 7_3:+31175759 None:intergenic
ACTAAGGCGAAGATTCGAAT+CGG 0.598264 7_3:-31181934 Msa1100780:CDS
ATGCAACCCTTAACTAGATG+TGG 0.598895 7_3:+31176419 None:intergenic
GGTAGAGATGGAAGACGACA+TGG 0.599304 7_3:-31178490 Msa1100780:CDS
AGCTTATGGAAGTTATGCTA+CGG 0.600781 7_3:-31178245 Msa1100780:CDS
TTATCATTGATCAATAGGAA+AGG 0.601346 7_3:-31175901 Msa1100780:three_prime_UTR
CATCAACGCTGTTGTGTGAG+TGG 0.601645 7_3:+31182127 None:intergenic
GCTTGTCAGGATTCATCAGA+AGG 0.601873 7_3:-31181803 Msa1100780:CDS
TGAAGATGATGAAATGGTGC+AGG 0.602115 7_3:-31178783 Msa1100780:intron
TGGATCAGTGTTGTCAATTG+CGG 0.602560 7_3:+31176609 None:intergenic
GATCCTCCTTAGATAGGATG+CGG 0.604218 7_3:+31178822 None:intergenic
ATCAACGCTGTTGTGTGAGT+GGG 0.604536 7_3:+31182128 None:intergenic
TGAACAAGTTCCATAATCCA+AGG 0.604569 7_3:+31175623 None:intergenic
ATGCGGCAGCTTGGTCGAGG+TGG 0.604698 7_3:-31178277 Msa1100780:intron
ATTGATCAATAGGAAAGGCT+AGG 0.605002 7_3:-31175896 Msa1100780:three_prime_UTR
CCTGGGGTGTATGCGGTCGG+TGG 0.606038 7_3:-31179469 Msa1100780:CDS
ACAAGAGTGATTTGTCCGCT+AGG 0.608543 7_3:+31176735 None:intergenic
ATTATGGGAATGGCTCCGAT+TGG 0.609678 7_3:-31179415 Msa1100780:CDS
CCATTATCCATAGATTCTAA+CGG 0.610541 7_3:+31176962 None:intergenic
AAGAATCCTAATCTGTGCAC+CGG 0.611412 7_3:+31180640 None:intergenic
ATTGCGGATAGCGGAAATAG+CGG 0.611559 7_3:+31176625 None:intergenic
CATCCGCATCCTATCTAAGG+AGG 0.616844 7_3:-31178825 Msa1100780:CDS
GGAAGCATCATTGGCCGCGG+CGG 0.618048 7_3:-31181985 Msa1100780:CDS
GATGGAAGACGACATGGACG+TGG 0.622802 7_3:-31178484 Msa1100780:CDS
GCTGGTCAAAGAACATCCTA+CGG 0.624883 7_3:-31182162 Msa1100780:CDS
TATCTAGGGGACCAAACATG+TGG 0.625382 7_3:-31177649 Msa1100780:three_prime_UTR
GCAAATGTTGAGTACGTGAA+GGG 0.628954 7_3:+31179506 None:intergenic
GCTTCGCCAGAAGGACCAGA+TGG 0.629484 7_3:-31178526 Msa1100780:CDS
ATGTTATCAGGTGGATGGAG+GGG 0.631700 7_3:-31180756 Msa1100780:intron
AACATCATAGCCGTCCAGGA+TGG 0.633212 7_3:+31176569 None:intergenic
ACAACACTGATCCAGAGCTA+AGG 0.637004 7_3:-31176600 Msa1100780:three_prime_UTR
GTGGGAACGTTTGTTGCCGT+AGG 0.637858 7_3:+31182146 None:intergenic
TAAGCCGTGCTAGACCTCAA+AGG 0.638003 7_3:+31176443 None:intergenic
TCATCAGAAGGTGATTGCTG+AGG 0.638299 7_3:-31181791 Msa1100780:CDS
GCAAGTAACTATGAACTACC+AGG 0.638924 7_3:+31177433 None:intergenic
ATTAAATGAACTAGCCCTAG+AGG 0.639234 7_3:+31176024 None:intergenic
TCAATGAACATTGCAGACCA+AGG 0.640390 7_3:+31175537 None:intergenic
ATTGCTGAGGATTTGCGTGG+TGG 0.640532 7_3:-31181778 Msa1100780:CDS
GCAGTGAGTTTGTCAAACCA+TGG 0.642376 7_3:+31177728 None:intergenic
GAAGCTAAAATCTACCTGCA+GGG 0.642778 7_3:+31177962 None:intergenic
ACTGCAATACAGACCACACA+AGG 0.647395 7_3:+31177324 None:intergenic
GTGTTGTCAATTGCGGATAG+CGG 0.651012 7_3:+31176616 None:intergenic
ACAACACGCTCATCACAACC+AGG 0.651674 7_3:+31181901 None:intergenic
GGAAGACGACATGGACGTGG+TGG 0.651683 7_3:-31178481 Msa1100780:CDS
TTTAGATCTAAAACACCATG+TGG 0.652874 7_3:-31177509 Msa1100780:three_prime_UTR
ACCTTGATGCCTCTATCTAG+GGG 0.653496 7_3:-31177662 Msa1100780:three_prime_UTR
TCAGAATTCAGCGCACAAAG+TGG 0.655152 7_3:+31180602 None:intergenic
CTACCTGCAGGGACCCACCA+AGG 0.655648 7_3:+31177973 None:intergenic
ACATTGCAGACCAAGGAGAG+AGG 0.657886 7_3:+31175544 None:intergenic
CTGGAAGACGAGATGAACCA+TGG 0.661796 7_3:-31177745 Msa1100780:three_prime_UTR
GAAGTAAGGTAAAATGGACA+TGG 0.661826 7_3:+31177610 None:intergenic
AATCGGACTGAAAACTCCAT+CGG 0.665768 7_3:+31179313 None:intergenic
ACAATTCTCACAATTCACAA+TGG 0.665812 7_3:-31182184 Msa1100780:exon
ACTGGGTAGAGGCGTCAAGG+TGG 0.670676 7_3:+31177705 None:intergenic
TACACCACCAGACAATCTGT+CGG 0.671440 7_3:+31178025 None:intergenic
AACTAAACACCGAACTGGTG+TGG 0.672580 7_3:-31176538 Msa1100780:three_prime_UTR
TAATCCAAGGAATCTCAAAG+TGG 0.676593 7_3:+31175636 None:intergenic
CATTCAGCTCATATAACCAG+AGG 0.678713 7_3:+31177191 None:intergenic
GTGATTGCTGAGGATTTGCG+TGG 0.679408 7_3:-31181781 Msa1100780:CDS
GTTTCACGATCTCGCCGCCG+CGG 0.681169 7_3:+31181971 None:intergenic
CATGTCACATCATAAACTCA+GGG 0.685338 7_3:+31176125 None:intergenic
ATGGAAGTTATGCTACGGAA+CGG 0.690137 7_3:-31178240 Msa1100780:CDS
GGCAAAGGAACATATCCACA+TGG 0.696425 7_3:+31177494 None:intergenic
TCAACTTTCTCACTGCACCG+GGG 0.700169 7_3:+31178968 None:intergenic
GGAGGTGTTATAGGTAAGGG+CGG 0.712082 7_3:-31179268 Msa1100780:CDS
GTATCTCGGAGGAGAAACCA+TGG 0.714795 7_3:-31178005 Msa1100780:CDS
TTGTCCGACAGATTGTCTGG+TGG 0.724794 7_3:-31178029 Msa1100780:CDS
GTGATGTTGGAGACTATCCA+CGG 0.725781 7_3:-31179369 Msa1100780:CDS
TGTCTGGTGGTGTATCTCGG+AGG 0.726292 7_3:-31178016 Msa1100780:CDS
GAGCCCGGATACATGGACCG+TGG 0.743404 7_3:+31179352 None:intergenic
GCTATAGCGCTATTGCCTAG+CGG 0.758653 7_3:-31176750 Msa1100780:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAAAAATTTAATTTT+TGG - chr7_3:31175894-31175913 Msa1100780:three_prime_UTR 0.0%
!! AAAGAATATGATATAATATT+TGG - chr7_3:31176142-31176161 Msa1100780:three_prime_UTR 10.0%
!!! AAAAAAAAAAAACCATTTTT+TGG - chr7_3:31176458-31176477 Msa1100780:three_prime_UTR 10.0%
!! TTTGAATAATATAATGATAT+TGG - chr7_3:31180215-31180234 Msa1100780:intron 10.0%
!!! TTTTTTTTTGCTTATAATAG+TGG + chr7_3:31176445-31176464 None:intergenic 15.0%
!! TTTAATTATTGTTTCATATG+CGG - chr7_3:31179314-31179333 Msa1100780:CDS 15.0%
!! TTGATTTATATAAATTGTGA+AGG - chr7_3:31180677-31180696 Msa1100780:CDS 15.0%
!! AAAATTGTATATTCATAAGT+TGG - chr7_3:31181356-31181375 Msa1100780:intron 15.0%
!!! TAATTGTATTGTATGTTTTT+AGG - chr7_3:31181767-31181786 Msa1100780:CDS 15.0%
!! TATTCAATGAATCCAAAAAA+TGG + chr7_3:31176473-31176492 None:intergenic 20.0%
!!! ATGTATCTAAAGCTTATTAT+AGG + chr7_3:31176510-31176529 None:intergenic 20.0%
!! TTTATTATAATAGTGACCAA+AGG - chr7_3:31176563-31176582 Msa1100780:three_prime_UTR 20.0%
!!! ATGTATCTAAAGCTTATTAT+AGG + chr7_3:31176510-31176529 None:intergenic 20.0%
!! TTTATTATAATAGTGACCAA+AGG - chr7_3:31176563-31176582 Msa1100780:three_prime_UTR 20.0%
!! AAAATATCAGAAAGAGATTA+GGG + chr7_3:31176822-31176841 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCTAAAG+TGG + chr7_3:31177180-31177199 None:intergenic 20.0%
!! AAAATAACTTATAGCTTACA+TGG + chr7_3:31177305-31177324 None:intergenic 20.0%
!!! AATCTAATGTTTTCAAATAG+CGG - chr7_3:31177374-31177393 Msa1100780:three_prime_UTR 20.0%
!! GTGGTATAATAAATCAAATT+AGG - chr7_3:31178362-31178381 Msa1100780:intron 20.0%
!! TATAATAAATCAAATTAGGC+AGG - chr7_3:31178366-31178385 Msa1100780:intron 20.0%
!!! AATCAATTTGTTTTGTCATA+TGG - chr7_3:31178500-31178519 Msa1100780:CDS 20.0%
!!! ATCAATTTGTTTTGTCATAT+GGG - chr7_3:31178501-31178520 Msa1100780:CDS 20.0%
!! TAAAATCCTGGAAAAATTAA+TGG + chr7_3:31179246-31179265 None:intergenic 20.0%
!! ATAAACTACAAAATAAATCG+AGG + chr7_3:31179671-31179690 None:intergenic 20.0%
!!! TTAAGGAAAGCTATTTTTAT+AGG + chr7_3:31180053-31180072 None:intergenic 20.0%
!! AATAAAAAAAGCAGTCATTA+AGG + chr7_3:31180070-31180089 None:intergenic 20.0%
!! TGCAAAATATTGTGAAATAA+TGG - chr7_3:31180915-31180934 Msa1100780:intron 20.0%
!!! TTTTCTAGTACATTTCTAAT+GGG - chr7_3:31181100-31181119 Msa1100780:intron 20.0%
!! TAAAAATAAGCTAATCCAAA+CGG - chr7_3:31181459-31181478 Msa1100780:intron 20.0%
!!! ATTTTATATGGGAAGTAAAA+TGG + chr7_3:31181546-31181565 None:intergenic 20.0%
!!! AATATGCACACATTTTATAT+GGG + chr7_3:31181557-31181576 None:intergenic 20.0%
!! GTTATTTATCATTGATCAAT+AGG - chr7_3:31181702-31181721 Msa1100780:intron 20.0%
!! ATAATCAATTAATCACAGAA+TGG + chr7_3:31181827-31181846 None:intergenic 20.0%
!! AAATATACTTTGTATATGAC+TGG - chr7_3:31182189-31182208 Msa1100780:five_prime_UTR 20.0%
! TATTATAGTTTCTCAATGTC+TGG - chr7_3:31175922-31175941 Msa1100780:three_prime_UTR 25.0%
! ATTATAGTTTCTCAATGTCT+GGG - chr7_3:31175923-31175942 Msa1100780:three_prime_UTR 25.0%
!!! AGTTTTTGAGTTATGCTATT+AGG - chr7_3:31176010-31176029 Msa1100780:three_prime_UTR 25.0%
! GTGTAATTCTTTAAGCTATT+CGG - chr7_3:31176059-31176078 Msa1100780:three_prime_UTR 25.0%
! AAAAACTAATATTACGACTG+AGG + chr7_3:31176370-31176389 None:intergenic 25.0%
! TTTATTGAGATTGTTGAATC+TGG - chr7_3:31176387-31176406 Msa1100780:three_prime_UTR 25.0%
! TAAATTACTAGTTACACCTT+TGG + chr7_3:31176582-31176601 None:intergenic 25.0%
! TCAATGTTAGAAAGAGATTA+GGG + chr7_3:31176642-31176661 None:intergenic 25.0%
! TAAATTACTAGTTACACCTT+TGG + chr7_3:31176582-31176601 None:intergenic 25.0%
! CAAAATATCAGAAAGAGATT+AGG + chr7_3:31176823-31176842 None:intergenic 25.0%
!! TTGTGATGAACCTTTTTAAT+TGG - chr7_3:31177054-31177073 Msa1100780:three_prime_UTR 25.0%
!!! TGTGATGAACCTTTTTAATT+GGG - chr7_3:31177055-31177074 Msa1100780:three_prime_UTR 25.0%
! ATAGCAAAGTAGAATTTGAA+CGG - chr7_3:31177534-31177553 Msa1100780:three_prime_UTR 25.0%
! ACATACAACAATTTCTCATT+CGG + chr7_3:31177991-31178010 None:intergenic 25.0%
!!! AAATATCAAGGTTGATAGTT+CGG - chr7_3:31178399-31178418 Msa1100780:intron 25.0%
! AAATAGTAGTTCAGAATCAT+CGG + chr7_3:31178913-31178932 None:intergenic 25.0%
!! TTCTCAATGCTTTTAGATTT+CGG - chr7_3:31178940-31178959 Msa1100780:CDS 25.0%
!! TTACAACCATTAATTTTTCC+AGG - chr7_3:31179237-31179256 Msa1100780:CDS 25.0%
! AGAACGTAAAATAAATGGTT+TGG + chr7_3:31179412-31179431 None:intergenic 25.0%
! ACGTTAGAACGTAAAATAAA+TGG + chr7_3:31179417-31179436 None:intergenic 25.0%
! ACATGTATAGAGAAGAATAT+GGG + chr7_3:31179465-31179484 None:intergenic 25.0%
! AACATGTATAGAGAAGAATA+TGG + chr7_3:31179466-31179485 None:intergenic 25.0%
! TAGATAACAAAAGTCAGTAT+TGG + chr7_3:31179539-31179558 None:intergenic 25.0%
!!! TGAATGGTTTTAAGTAACAT+AGG + chr7_3:31179704-31179723 None:intergenic 25.0%
!!! AGCTATTTTTATAGGTTCTT+GGG + chr7_3:31180045-31180064 None:intergenic 25.0%
!!! AAGCTATTTTTATAGGTTCT+TGG + chr7_3:31180046-31180065 None:intergenic 25.0%
!!! AATGACTGCTTTTTTTATTC+CGG - chr7_3:31180071-31180090 Msa1100780:intron 25.0%
! GATTCTAACAGAAATTGTTT+GGG + chr7_3:31180599-31180618 None:intergenic 25.0%
! AGATTCTAACAGAAATTGTT+TGG + chr7_3:31180600-31180619 None:intergenic 25.0%
! ACAATTTCTGTTAGAATCTA+TGG - chr7_3:31180601-31180620 Msa1100780:CDS 25.0%
! TGTTAGAATCTATGGATAAT+GGG - chr7_3:31180609-31180628 Msa1100780:CDS 25.0%
! TACAAATCCCATTCTTTAAT+AGG - chr7_3:31180792-31180811 Msa1100780:intron 25.0%
! TTTGACTCCTATTAAAGAAT+GGG + chr7_3:31180802-31180821 None:intergenic 25.0%
! ATTTGACTCCTATTAAAGAA+TGG + chr7_3:31180803-31180822 None:intergenic 25.0%
!!! GTTTTCTAGTACATTTCTAA+TGG - chr7_3:31181099-31181118 Msa1100780:intron 25.0%
! TTGTATATGTAAGAGATTGA+GGG - chr7_3:31181243-31181262 Msa1100780:intron 25.0%
!! CAATATGCACACATTTTATA+TGG + chr7_3:31181558-31181577 None:intergenic 25.0%
! CATATAAAATGTGTGCATAT+TGG - chr7_3:31181556-31181575 Msa1100780:intron 25.0%
! CAAAATAGTGTGTGTTAAAA+TGG + chr7_3:31181625-31181644 None:intergenic 25.0%
! TTATCATTGATCAATAGGAA+AGG - chr7_3:31181707-31181726 Msa1100780:intron 25.0%
! TATGGTAAATAGTTGAGATT+CGG - chr7_3:31182020-31182039 Msa1100780:CDS 25.0%
GTTTGTGAATTGTGACTTTA+GGG + chr7_3:31175404-31175423 None:intergenic 30.0%
TGTTTGTGAATTGTGACTTT+AGG + chr7_3:31175405-31175424 None:intergenic 30.0%
ACAATTCTCACAATTCACAA+TGG - chr7_3:31175424-31175443 Msa1100780:three_prime_UTR 30.0%
!! TCGAATGATTTTGAAGATTC+TGG - chr7_3:31175755-31175774 Msa1100780:three_prime_UTR 30.0%
TACTTATGATTCACAAACAC+GGG + chr7_3:31176264-31176283 None:intergenic 30.0%
CTACTTATGATTCACAAACA+CGG + chr7_3:31176265-31176284 None:intergenic 30.0%
CTCAATGTTAGAAAGAGATT+AGG + chr7_3:31176643-31176662 None:intergenic 30.0%
TTAGGATTCTTAAGGATGAT+CGG - chr7_3:31176980-31176999 Msa1100780:three_prime_UTR 30.0%
AATCTACAGCCCAATTAAAA+AGG + chr7_3:31177067-31177086 None:intergenic 30.0%
AATGTTGTAAATCCAGATCA+CGG + chr7_3:31177419-31177438 None:intergenic 30.0%
GTATTAAATAGCATCCACAT+GGG + chr7_3:31177565-31177584 None:intergenic 30.0%
!!! AGATTGACAACATTTTTTCC+TGG - chr7_3:31177658-31177677 Msa1100780:three_prime_UTR 30.0%
TACGAAAACAACTTACTGTT+CGG + chr7_3:31177742-31177761 None:intergenic 30.0%
! AAATGAACCGATTCAAATAG+AGG - chr7_3:31177814-31177833 Msa1100780:intron 30.0%
TATAGAGCCTCTATTTGAAT+CGG + chr7_3:31177824-31177843 None:intergenic 30.0%
ATAAGAAATGATTGAATGGC+TGG - chr7_3:31178525-31178544 Msa1100780:CDS 30.0%
! CATCTTCAGTTGCAATTTTA+GGG + chr7_3:31178813-31178832 None:intergenic 30.0%
! TCATCTTCAGTTGCAATTTT+AGG + chr7_3:31178814-31178833 None:intergenic 30.0%
!!! TGATGTCTTTTTTGGGAAAT+CGG - chr7_3:31178875-31178894 Msa1100780:CDS 30.0%
AATAGTAGTTCAGAATCATC+GGG + chr7_3:31178912-31178931 None:intergenic 30.0%
! TCTCAATGCTTTTAGATTTC+GGG - chr7_3:31178941-31178960 Msa1100780:CDS 30.0%
! GAGAGCAAATCTTTTTGATA+AGG - chr7_3:31179012-31179031 Msa1100780:CDS 30.0%
TATTCTTATTCTGATGGCTA+TGG - chr7_3:31179151-31179170 Msa1100780:intron 30.0%
!! TTTTTCCAGGATTTTAAGTG+CGG - chr7_3:31179250-31179269 Msa1100780:CDS 30.0%
!!! TGGTTTTAAGTAACATAGGA+AGG + chr7_3:31179700-31179719 None:intergenic 30.0%
TCTGTTAATGCTAATGTGAA+TGG + chr7_3:31179720-31179739 None:intergenic 30.0%
ATGAGCATCAAAATTCTACA+TGG + chr7_3:31179768-31179787 None:intergenic 30.0%
!! GTTTTAGATCTAAAGACAAC+CGG + chr7_3:31180093-31180112 None:intergenic 30.0%
! TTTAGATCTAAAACACCATG+TGG - chr7_3:31180099-31180118 Msa1100780:intron 30.0%
TAAATTTGAAAGACCTTGTG+TGG - chr7_3:31180271-31180290 Msa1100780:intron 30.0%
ATCTGACCACTATCTTATAT+TGG - chr7_3:31180347-31180366 Msa1100780:intron 30.0%
GCAAAACCAATATAAGATAG+TGG + chr7_3:31180356-31180375 None:intergenic 30.0%
!! TAGTTGAACTTTTTCCAGTT+CGG - chr7_3:31180392-31180411 Msa1100780:intron 30.0%
!!! TCTGGTTTTTTTTTGAGTGA+AGG - chr7_3:31180487-31180506 Msa1100780:intron 30.0%
! AATTGTTTTCAAAACTGTGC+GGG + chr7_3:31180554-31180573 None:intergenic 30.0%
! GAATTGTTTTCAAAACTGTG+CGG + chr7_3:31180555-31180574 None:intergenic 30.0%
CTGTTAGAATCTATGGATAA+TGG - chr7_3:31180608-31180627 Msa1100780:CDS 30.0%
ACAATTTCCGTTAGAATCTA+TGG - chr7_3:31180639-31180658 Msa1100780:CDS 30.0%
CCATTATCCATAGATTCTAA+CGG + chr7_3:31180611-31180630 None:intergenic 30.0%
CGTTAGAATCTATGGATAAT+GGG - chr7_3:31180647-31180666 Msa1100780:CDS 30.0%
!! TGTTTTAAATAGCAGCAATG+CGG - chr7_3:31180747-31180766 Msa1100780:CDS 30.0%
AAAAACAAACAAGCATGGAT+TGG + chr7_3:31181137-31181156 None:intergenic 30.0%
AACTCAAAAACAAACAAGCA+TGG + chr7_3:31181142-31181161 None:intergenic 30.0%
CTCAATCTCTTACATATACA+AGG + chr7_3:31181244-31181263 None:intergenic 30.0%
CTTGTATATGTAAGAGATTG+AGG - chr7_3:31181242-31181261 Msa1100780:intron 30.0%
AAAACAAGCTTAATCCAAAC+AGG + chr7_3:31181269-31181288 None:intergenic 30.0%
ATATTTCATCATTCGATCAC+TGG - chr7_3:31181669-31181688 Msa1100780:intron 30.0%
TATTTCATCATTCGATCACT+GGG - chr7_3:31181670-31181689 Msa1100780:intron 30.0%
TGTTTAACATGGCATTTATG+TGG + chr7_3:31181801-31181820 None:intergenic 30.0%
TATAAGTACAAGAGGTTATG+AGG - chr7_3:31181878-31181897 Msa1100780:CDS 30.0%
AAGACTAATATCCAACAGTT+GGG + chr7_3:31181905-31181924 None:intergenic 30.0%
!! ATTAGTCTTGCTCTATGTTT+AGG - chr7_3:31181916-31181935 Msa1100780:CDS 30.0%
! ATGGAACTTGTTCAAGTATT+TGG - chr7_3:31181994-31182013 Msa1100780:CDS 30.0%
TGTTCAAGTATTTGGAGATA+TGG - chr7_3:31182002-31182021 Msa1100780:CDS 30.0%
! TGACCTTTTGTAATCTTCAA+AGG + chr7_3:31182146-31182165 None:intergenic 30.0%
GAAGATTACAAAAGGTCATT+TGG - chr7_3:31182148-31182167 Msa1100780:CDS 30.0%
GTTATGTGAAATGTGTCTCT+TGG + chr7_3:31175557-31175576 None:intergenic 35.0%
ACAACTACGTCTTGATACTA+AGG - chr7_3:31175658-31175677 Msa1100780:three_prime_UTR 35.0%
TGAAGATGAAGACGTTGATA+TGG - chr7_3:31175853-31175872 Msa1100780:three_prime_UTR 35.0%
GGATTATTCAGTGTCGTATT+TGG - chr7_3:31176031-31176050 Msa1100780:three_prime_UTR 35.0%
ATCAGTGTTTGTGTAGTGTT+TGG - chr7_3:31176327-31176346 Msa1100780:three_prime_UTR 35.0%
ATTGTTGAATCTGGTGTTTG+TGG - chr7_3:31176396-31176415 Msa1100780:three_prime_UTR 35.0%
TTGTGATCTCTGATGTTATC+AGG - chr7_3:31176840-31176859 Msa1100780:intron 35.0%
GGCAGATTGTTCAGAATATA+AGG - chr7_3:31176938-31176957 Msa1100780:three_prime_UTR 35.0%
TGCACAGATTAGGATTCTTA+AGG - chr7_3:31176972-31176991 Msa1100780:three_prime_UTR 35.0%
TCCTGAATCAATGTTGTCAA+TGG - chr7_3:31177334-31177353 Msa1100780:three_prime_UTR 35.0%
TGAATCAATGTTGTCAATGG+CGG - chr7_3:31177337-31177356 Msa1100780:three_prime_UTR 35.0%
TAAATCCAGATCACGGAAAA+TGG + chr7_3:31177412-31177431 None:intergenic 35.0%
! CTGGATTTACAACATTTTCC+TGG - chr7_3:31177423-31177442 Msa1100780:three_prime_UTR 35.0%
! ACATTTTCCTGGAGAGTTTA+TGG - chr7_3:31177434-31177453 Msa1100780:three_prime_UTR 35.0%
!! GTTGTTTTCATAAGTTGTCC+TGG - chr7_3:31177487-31177506 Msa1100780:three_prime_UTR 35.0%
CGTATTAAATAGCATCCACA+TGG + chr7_3:31177566-31177585 None:intergenic 35.0%
!!! CATTTTTTCCTGGAGAGTTA+TGG - chr7_3:31177668-31177687 Msa1100780:three_prime_UTR 35.0%
ACGAAAACAACTTACTGTTC+GGG + chr7_3:31177741-31177760 None:intergenic 35.0%
CTTCATTTGTGAAACTGTTC+AGG + chr7_3:31177771-31177790 None:intergenic 35.0%
! TGAGATTGCTGTTGTGAAAA+AGG - chr7_3:31178045-31178064 Msa1100780:CDS 35.0%
TAGCAGTTGGACAAACAAAT+CGG + chr7_3:31178315-31178334 None:intergenic 35.0%
!! ATTGGAGGTGTTATAGGTAA+GGG - chr7_3:31178337-31178356 Msa1100780:intron 35.0%
AATCAAATTAGGCAGGATTC+TGG - chr7_3:31178373-31178392 Msa1100780:intron 35.0%
ATCAAATTAGGCAGGATTCT+GGG - chr7_3:31178374-31178393 Msa1100780:intron 35.0%
TGACTGCTTAATAGCCATTT+CGG - chr7_3:31178435-31178454 Msa1100780:CDS 35.0%
GGGCATAAGAAATGATTGAA+TGG - chr7_3:31178521-31178540 Msa1100780:CDS 35.0%
TGTGTTTATGCAGTTCTTTG+AGG - chr7_3:31178576-31178595 Msa1100780:CDS 35.0%
GAGAAAGTTGAAAGAGATTC+TGG - chr7_3:31178652-31178671 Msa1100780:CDS 35.0%
! ATTGGTTGCCTTATTGGTAA+AGG - chr7_3:31178718-31178737 Msa1100780:intron 35.0%
TTGATCCTCCTTTACCAATA+AGG + chr7_3:31178729-31178748 None:intergenic 35.0%
CAATCATTACTGAGATGAGA+AGG - chr7_3:31178746-31178765 Msa1100780:intron 35.0%
TGCAACTGAAGATGATGAAA+TGG - chr7_3:31178819-31178838 Msa1100780:CDS 35.0%
!!! TGCTTGAGTGATGTCTTTTT+TGG - chr7_3:31178867-31178886 Msa1100780:CDS 35.0%
!!! GCTTGAGTGATGTCTTTTTT+GGG - chr7_3:31178868-31178887 Msa1100780:CDS 35.0%
! CTCAATGCTTTTAGATTTCG+GGG - chr7_3:31178942-31178961 Msa1100780:CDS 35.0%
! TCAATGCTTTTAGATTTCGG+GGG - chr7_3:31178943-31178962 Msa1100780:CDS 35.0%
TTCAACTATGAAGGTAGAGA+TGG - chr7_3:31179106-31179125 Msa1100780:intron 35.0%
AGCTTATGGAAGTTATGCTA+CGG - chr7_3:31179363-31179382 Msa1100780:CDS 35.0%
AACCATGGTTACTAAAACCT+TGG - chr7_3:31179618-31179637 Msa1100780:intron 35.0%
ATGGTTACTAAAACCTTGGT+GGG - chr7_3:31179622-31179641 Msa1100780:intron 35.0%
CAAAATTCTACATGGTACAC+TGG + chr7_3:31179760-31179779 None:intergenic 35.0%
TTCAATAGTCTCCACATGTT+TGG + chr7_3:31179973-31179992 None:intergenic 35.0%
GAAGTAAGGTAAAATGGACA+TGG + chr7_3:31180001-31180020 None:intergenic 35.0%
GCTTAGGAAGTAAGGTAAAA+TGG + chr7_3:31180007-31180026 None:intergenic 35.0%
AGATAGTACAGGTATACAAC+TGG + chr7_3:31180138-31180157 None:intergenic 35.0%
CGACAAAACAAAGATAGTAC+AGG + chr7_3:31180149-31180168 None:intergenic 35.0%
!!! TTTGTTTTGTCGTGTTTTCC+TGG - chr7_3:31180157-31180176 Msa1100780:intron 35.0%
ATTTAACGCACAAGACTGTA+AGG + chr7_3:31180256-31180275 None:intergenic 35.0%
!! GAATGGACTGAATACAAGAT+TGG - chr7_3:31180435-31180454 Msa1100780:intron 35.0%
!! TGAATACAAGATTGGTTCGT+TGG - chr7_3:31180443-31180462 Msa1100780:intron 35.0%
!! TCGTTGGTGTTTAGTTTGAA+TGG - chr7_3:31180459-31180478 Msa1100780:intron 35.0%
!! CGTTGGTGTTTAGTTTGAAT+GGG - chr7_3:31180460-31180479 Msa1100780:intron 35.0%
!! CAGAAATTGTTTGGGTTGTT+TGG + chr7_3:31180591-31180610 None:intergenic 35.0%
CCGTTAGAATCTATGGATAA+TGG - chr7_3:31180646-31180665 Msa1100780:CDS 35.0%
! GCTATTTAAAACAACTGCTC+TGG + chr7_3:31180740-31180759 None:intergenic 35.0%
AAAGAATGGGATTTGTATCG+CGG + chr7_3:31180789-31180808 None:intergenic 35.0%
! GCTTTAAATAGCAGCGATAT+CGG - chr7_3:31180834-31180853 Msa1100780:intron 35.0%
AATGAAACTAAACACCGAAC+TGG - chr7_3:31181065-31181084 Msa1100780:intron 35.0%
!!! GTTTTTGAGTTCTACCTTTG+AGG - chr7_3:31181151-31181170 Msa1100780:intron 35.0%
CATGTCACATCATAAACTCA+GGG + chr7_3:31181486-31181505 None:intergenic 35.0%
ACATGTCACATCATAAACTC+AGG + chr7_3:31181487-31181506 None:intergenic 35.0%
ATTAAATGAACTAGCCCTAG+AGG + chr7_3:31181587-31181606 None:intergenic 35.0%
ATTGATCAATAGGAAAGGCT+AGG - chr7_3:31181712-31181731 Msa1100780:intron 35.0%
GTTAGTCGTATAAGTACAAG+AGG - chr7_3:31181870-31181889 Msa1100780:CDS 35.0%
CAAGACTAATATCCAACAGT+TGG + chr7_3:31181906-31181925 None:intergenic 35.0%
!! TTGCTCTATGTTTAGGTTGT+TGG - chr7_3:31181923-31181942 Msa1100780:CDS 35.0%
TAATCCAAGGAATCTCAAAG+TGG + chr7_3:31181975-31181994 None:intergenic 35.0%
!! CTTTGAGATTCCTTGGATTA+TGG - chr7_3:31181975-31181994 Msa1100780:CDS 35.0%
TGAACAAGTTCCATAATCCA+AGG + chr7_3:31181988-31182007 None:intergenic 35.0%
CAATGTTCATTGAATGCAGT+TGG - chr7_3:31182081-31182100 Msa1100780:CDS 35.0%
GAATGAGACAGGTAATCTAT+TGG - chr7_3:31182114-31182133 Msa1100780:CDS 35.0%
GACAGGTAATCTATTGGATT+AGG - chr7_3:31182120-31182139 Msa1100780:CDS 35.0%
! AGGCCTTTGAAGATTACAAA+AGG - chr7_3:31182140-31182159 Msa1100780:CDS 35.0%
TTCTCACAATTCACAATGGC+TGG - chr7_3:31175428-31175447 Msa1100780:three_prime_UTR 40.0%
ACTAAGGCGAAGATTCGAAT+CGG - chr7_3:31175674-31175693 Msa1100780:three_prime_UTR 40.0%
! TTGTGATGAGCGTGTTGTTA+CGG - chr7_3:31175712-31175731 Msa1100780:three_prime_UTR 40.0%
TGAGTTTATGTGTCCTGCTA+TGG - chr7_3:31175778-31175797 Msa1100780:three_prime_UTR 40.0%
TGAAGACGTTGATATGGAGA+AGG - chr7_3:31175859-31175878 Msa1100780:three_prime_UTR 40.0%
GGATTATTGTCTGTGTGATG+AGG - chr7_3:31176080-31176099 Msa1100780:three_prime_UTR 40.0%
TGATGTTGATATGTCGATCG+TGG - chr7_3:31176107-31176126 Msa1100780:three_prime_UTR 40.0%
!! TGAATCAGTGCTGACGTATT+TGG - chr7_3:31176236-31176255 Msa1100780:three_prime_UTR 40.0%
CGGTAATTCATACCACACTT+CGG - chr7_3:31176419-31176438 Msa1100780:three_prime_UTR 40.0%
TTATAATAGTGGCCGAAGTG+TGG + chr7_3:31176434-31176453 None:intergenic 40.0%
TGATCTCTGATGTTATCAGG+TGG - chr7_3:31176843-31176862 Msa1100780:intron 40.0%
ATCAGATTGGGTGTGTGATT+GGG - chr7_3:31176908-31176927 Msa1100780:three_prime_UTR 40.0%
CAGAATATAAGGAGTGAGAC+CGG - chr7_3:31176949-31176968 Msa1100780:three_prime_UTR 40.0%
AAGAATCCTAATCTGTGCAC+CGG + chr7_3:31176971-31176990 None:intergenic 40.0%
! GAATTCTGATGAGCTTGTTC+AGG - chr7_3:31177020-31177039 Msa1100780:three_prime_UTR 40.0%
!! GCCATTGACAACATTGATTC+AGG + chr7_3:31177338-31177357 None:intergenic 40.0%
CTTACTTCCATAAACTCTCC+AGG + chr7_3:31177444-31177463 None:intergenic 40.0%
!! TACGAAGTGTTGTCAAACAG+TGG - chr7_3:31177582-31177601 Msa1100780:three_prime_UTR 40.0%
! AAACCACCATTTTCCATGAG+TGG - chr7_3:31177611-31177630 Msa1100780:three_prime_UTR 40.0%
GTTCAACCACTCATGGAAAA+TGG + chr7_3:31177620-31177639 None:intergenic 40.0%
!! GTTGAACAAACCGCCATTTT+GGG - chr7_3:31177633-31177652 Msa1100780:three_prime_UTR 40.0%
GTTGTCAATCTCACCCAAAA+TGG + chr7_3:31177649-31177668 None:intergenic 40.0%
ACTTACTTCCATAACTCTCC+AGG + chr7_3:31177679-31177698 None:intergenic 40.0%
TCGGATGCAACAATAACAGA+TGG + chr7_3:31177972-31177991 None:intergenic 40.0%
! TGTGAAAAAGGCTCTGATTC+AGG - chr7_3:31178057-31178076 Msa1100780:intron 40.0%
GCAAATGTTGAGTACGTGAA+GGG + chr7_3:31178105-31178124 None:intergenic 40.0%
AGCAAATGTTGAGTACGTGA+AGG + chr7_3:31178106-31178125 None:intergenic 40.0%
AATCGGACTGAAAACTCCAT+CGG + chr7_3:31178298-31178317 None:intergenic 40.0%
GTTTGTCCAACTGCTAACAT+TGG - chr7_3:31178319-31178338 Msa1100780:intron 40.0%
!! GCTAACATTGGAGGTGTTAT+AGG - chr7_3:31178331-31178350 Msa1100780:intron 40.0%
!! CATTGGAGGTGTTATAGGTA+AGG - chr7_3:31178336-31178355 Msa1100780:intron 40.0%
TCAAATTAGGCAGGATTCTG+GGG - chr7_3:31178375-31178394 Msa1100780:intron 40.0%
TTTCAACTTTCTCACTGCAC+CGG + chr7_3:31178645-31178664 None:intergenic 40.0%
GTATTCTCTCTTTCACTAGC+CGG - chr7_3:31178674-31178693 Msa1100780:intron 40.0%
TCTCGAATTGGTTGCCTTAT+TGG - chr7_3:31178712-31178731 Msa1100780:intron 40.0%
TAACATCCGCATCCTATCTA+AGG - chr7_3:31178780-31178799 Msa1100780:intron 40.0%
TGAAGATGATGAAATGGTGC+AGG - chr7_3:31178825-31178844 Msa1100780:CDS 40.0%
! AAAAAGATTTGCTCTCAGCC+GGG + chr7_3:31179008-31179027 None:intergenic 40.0%
! CAAAAAGATTTGCTCTCAGC+CGG + chr7_3:31179009-31179028 None:intergenic 40.0%
CCTTCATAGTTGAAACCATC+TGG + chr7_3:31179100-31179119 None:intergenic 40.0%
CCAGATGGTTTCAACTATGA+AGG - chr7_3:31179097-31179116 Msa1100780:intron 40.0%
GGTGGCTATTCTTATTCTGA+TGG - chr7_3:31179145-31179164 Msa1100780:intron 40.0%
TCTTATTCTGATGGCTATGG+AGG - chr7_3:31179154-31179173 Msa1100780:intron 40.0%
TGGAAACTATGGAAGTTCAC+AGG - chr7_3:31179207-31179226 Msa1100780:CDS 40.0%
ATGGAAGTTATGCTACGGAA+CGG - chr7_3:31179368-31179387 Msa1100780:CDS 40.0%
GGACAATCTATCAGACAATC+TGG + chr7_3:31179565-31179584 None:intergenic 40.0%
!! CACCAAGGTTTTAGTAACCA+TGG + chr7_3:31179623-31179642 None:intergenic 40.0%
CATGGTTACTAAAACCTTGG+TGG - chr7_3:31179621-31179640 Msa1100780:intron 40.0%
GAAGCTAAAATCTACCTGCA+GGG + chr7_3:31179649-31179668 None:intergenic 40.0%
ATAACTCAGCTGTTTGGATG+GGG + chr7_3:31179816-31179835 None:intergenic 40.0%
CATAACTCAGCTGTTTGGAT+GGG + chr7_3:31179817-31179836 None:intergenic 40.0%
ACATAACTCAGCTGTTTGGA+TGG + chr7_3:31179818-31179837 None:intergenic 40.0%
CTTCACATAACTCAGCTGTT+TGG + chr7_3:31179822-31179841 None:intergenic 40.0%
TTCATCTCGTCTTCCAGTTT+AGG + chr7_3:31179860-31179879 None:intergenic 40.0%
CCATGAATTTGTCAGTCACT+GGG + chr7_3:31179923-31179942 None:intergenic 40.0%
AACCTTGATGCCTCTATCTA+GGG - chr7_3:31179945-31179964 Msa1100780:intron 40.0%
TACAGGTATACAACTGGCAA+AGG + chr7_3:31180132-31180151 None:intergenic 40.0%
GCAAGTAACTATGAACTACC+AGG + chr7_3:31180178-31180197 None:intergenic 40.0%
CATTCAGCTCATATAACCAG+AGG + chr7_3:31180420-31180439 None:intergenic 40.0%
CTCTGGTTATATGAGCTGAA+TGG - chr7_3:31180418-31180437 Msa1100780:intron 40.0%
!! TTAGTTTGAATGGGCTAGTC+TGG - chr7_3:31180469-31180488 Msa1100780:intron 40.0%
! GCTATTTAAAGCAACTGCTC+TGG + chr7_3:31180826-31180845 None:intergenic 40.0%
CTCTACACAACAATGCTGTA+AGG + chr7_3:31180950-31180969 None:intergenic 40.0%
CTTACAGCATTGTTGTGTAG+AGG - chr7_3:31180948-31180967 Msa1100780:intron 40.0%
TGGATCAGTGTTGTCAATTG+CGG + chr7_3:31181002-31181021 None:intergenic 40.0%
AACTATACACCACACCAGTT+CGG + chr7_3:31181082-31181101 None:intergenic 40.0%
GCTTAGCCACATCTAGTTAA+GGG - chr7_3:31181183-31181202 Msa1100780:intron 40.0%
ATGCAACCCTTAACTAGATG+TGG + chr7_3:31181192-31181211 None:intergenic 40.0%
AAATGGCAACGCTAGCTAAA+TGG + chr7_3:31181529-31181548 None:intergenic 40.0%
TGCATATTGGATTGTCCTCT+AGG - chr7_3:31181569-31181588 Msa1100780:intron 40.0%
GCATATTGGATTGTCCTCTA+GGG - chr7_3:31181570-31181589 Msa1100780:intron 40.0%
!! CAGAATGGTGCTGTTTAACA+TGG + chr7_3:31181812-31181831 None:intergenic 40.0%
ACGTGTTCAGAAGACAGATA+AGG + chr7_3:31181852-31181871 None:intergenic 40.0%
TCAATGAACATTGCAGACCA+AGG + chr7_3:31182074-31182093 None:intergenic 40.0%
GAATGCAGTTGGATTTCTTC+AGG - chr7_3:31182092-31182111 Msa1100780:CDS 40.0%
GATTTCTTCAGGAATGAGAC+AGG - chr7_3:31182103-31182122 Msa1100780:CDS 40.0%
GCTGGTCAAAGAACATCCTA+CGG - chr7_3:31175446-31175465 Msa1100780:three_prime_UTR 45.0%
ATCAACGCTGTTGTGTGAGT+GGG + chr7_3:31175483-31175502 None:intergenic 45.0%
!! TTTCGTCGGTGTTAGGGTTA+CGG + chr7_3:31175529-31175548 None:intergenic 45.0%
GTGAAATGTGTCTCTTGGAG+TGG + chr7_3:31175552-31175571 None:intergenic 45.0%
! AGGGCAAAGGTAACGGTAAA+CGG + chr7_3:31175591-31175610 None:intergenic 45.0%
CTTTGCCCTGTTCGCAAAAT+CGG - chr7_3:31175602-31175621 Msa1100780:three_prime_UTR 45.0%
! TGCTTCCGATTTTGCGAACA+GGG + chr7_3:31175610-31175629 None:intergenic 45.0%
! ATGCTTCCGATTTTGCGAAC+AGG + chr7_3:31175611-31175630 None:intergenic 45.0%
!! CGCAAAATCGGAAGCATCAT+TGG - chr7_3:31175614-31175633 Msa1100780:three_prime_UTR 45.0%
GCTTGTCAGGATTCATCAGA+AGG - chr7_3:31175805-31175824 Msa1100780:three_prime_UTR 45.0%
TCATCAGAAGGTGATTGCTG+AGG - chr7_3:31175817-31175836 Msa1100780:three_prime_UTR 45.0%
ACAGACACGGAAACCAAACA+TGG + chr7_3:31175949-31175968 None:intergenic 45.0%
! ATGTTTGGTTTCCGTGTCTG+TGG - chr7_3:31175948-31175967 Msa1100780:three_prime_UTR 45.0%
TTGAAGCACGAACACAGACA+CGG + chr7_3:31175982-31176001 None:intergenic 45.0%
GTTGAATCTGGTGTTTGTGG+CGG - chr7_3:31176399-31176418 Msa1100780:three_prime_UTR 45.0%
CTCTGATGTTATCAGGTGGA+TGG - chr7_3:31176847-31176866 Msa1100780:intron 45.0%
TGATGTTATCAGGTGGATGG+AGG - chr7_3:31176850-31176869 Msa1100780:intron 45.0%
GATGTTATCAGGTGGATGGA+GGG - chr7_3:31176851-31176870 Msa1100780:intron 45.0%
ATGTTATCAGGTGGATGGAG+GGG - chr7_3:31176852-31176871 Msa1100780:intron 45.0%
TTGTGGCGTCTGATCAGATT+GGG - chr7_3:31176896-31176915 Msa1100780:three_prime_UTR 45.0%
GATCAGATTGGGTGTGTGAT+TGG - chr7_3:31176907-31176926 Msa1100780:three_prime_UTR 45.0%
ATTGGGTGTGTGATTGGGAA+AGG - chr7_3:31176913-31176932 Msa1100780:three_prime_UTR 45.0%
TCAGAATTCAGCGCACAAAG+TGG + chr7_3:31177009-31177028 None:intergenic 45.0%
!!! AACTGCCATTTTCCGTGATC+TGG - chr7_3:31177404-31177423 Msa1100780:three_prime_UTR 45.0%
!! TTTGAACGGATTGTCCCATG+TGG - chr7_3:31177548-31177567 Msa1100780:three_prime_UTR 45.0%
CAACCACTCATGGAAAATGG+TGG + chr7_3:31177617-31177636 None:intergenic 45.0%
! GGTTGAACAAACCGCCATTT+TGG - chr7_3:31177632-31177651 Msa1100780:three_prime_UTR 45.0%
GTCAATCTCACCCAAAATGG+CGG + chr7_3:31177646-31177665 None:intergenic 45.0%
!! AAAGGCTCTGATTCAGGTTG+CGG - chr7_3:31178063-31178082 Msa1100780:intron 45.0%
TTGCTTACTTCTGCAGTTCC+TGG - chr7_3:31178121-31178140 Msa1100780:intron 45.0%
TGCTTACTTCTGCAGTTCCT+GGG - chr7_3:31178122-31178141 Msa1100780:intron 45.0%
ATCGGAGCCATTCCCATAAT+TGG + chr7_3:31178193-31178212 None:intergenic 45.0%
ATTATGGGAATGGCTCCGAT+TGG - chr7_3:31178193-31178212 Msa1100780:intron 45.0%
! GGTGGTTATGGAGGGTATAA+AGG - chr7_3:31178217-31178236 Msa1100780:intron 45.0%
! GGAGGGTATAAAGGTGATGT+TGG - chr7_3:31178226-31178245 Msa1100780:CDS 45.0%
GTGATGTTGGAGACTATCCA+CGG - chr7_3:31178239-31178258 Msa1100780:CDS 45.0%
TGTCCAACTGCTAACATTGG+AGG - chr7_3:31178322-31178341 Msa1100780:intron 45.0%
ACACCTCCAATGTTAGCAGT+TGG + chr7_3:31178328-31178347 None:intergenic 45.0%
!! GGATTCTGGGGCAAATATCA+AGG - chr7_3:31178387-31178406 Msa1100780:intron 45.0%
!! GTTGATAGTTCGGCAACTGA+AGG - chr7_3:31178409-31178428 Msa1100780:CDS 45.0%
CACAGCTGCTTCAATTGTTG+CGG + chr7_3:31178611-31178630 None:intergenic 45.0%
TTCAACTTTCTCACTGCACC+GGG + chr7_3:31178644-31178663 None:intergenic 45.0%
! GGTTGCCTTATTGGTAAAGG+AGG - chr7_3:31178721-31178740 Msa1100780:intron 45.0%
GATCCTCCTTAGATAGGATG+CGG + chr7_3:31178789-31178808 None:intergenic 45.0%
TAGGGAGATCCTCCTTAGAT+AGG + chr7_3:31178795-31178814 None:intergenic 45.0%
ATGATGAAATGGTGCAGGTG+AGG - chr7_3:31178830-31178849 Msa1100780:CDS 45.0%
CTCTTGTGCAAGTACTTACC+CGG - chr7_3:31178987-31179006 Msa1100780:CDS 45.0%
!! GGAAGATATGCAAGTACTGG+TGG + chr7_3:31179061-31179080 None:intergenic 45.0%
GCAGGAAGATATGCAAGTAC+TGG + chr7_3:31179064-31179083 None:intergenic 45.0%
TTGAAACCATCTGGTCCTTC+TGG + chr7_3:31179091-31179110 None:intergenic 45.0%
! GGCTCAAGTGATTTTGCATC+TGG - chr7_3:31179175-31179194 Msa1100780:CDS 45.0%
! AGTGATTTTGCATCTGGCGA+CGG - chr7_3:31179181-31179200 Msa1100780:CDS 45.0%
CTCATCCGCACTTAAAATCC+TGG + chr7_3:31179258-31179277 None:intergenic 45.0%
TTGTTTCATATGCGGCAGCT+TGG - chr7_3:31179322-31179341 Msa1100780:CDS 45.0%
AGATTGTCCGACAGATTGTC+TGG - chr7_3:31179576-31179595 Msa1100780:intron 45.0%
TACACCACCAGACAATCTGT+CGG + chr7_3:31179586-31179605 None:intergenic 45.0%
! GATTGTCTGGTGGTGTATCT+CGG - chr7_3:31179589-31179608 Msa1100780:intron 45.0%
GGAAGCTAAAATCTACCTGC+AGG + chr7_3:31179650-31179669 None:intergenic 45.0%
TTCTACATGGTACACTGGTC+AGG + chr7_3:31179755-31179774 None:intergenic 45.0%
AGTTTAGGCAGTAGGCTTCA+GGG + chr7_3:31179845-31179864 None:intergenic 45.0%
GCAGTGAGTTTGTCAAACCA+TGG + chr7_3:31179883-31179902 None:intergenic 45.0%
ATTTGTCAGTCACTGGGTAG+AGG + chr7_3:31179917-31179936 None:intergenic 45.0%
CCCAGTGACTGACAAATTCA+TGG - chr7_3:31179920-31179939 Msa1100780:intron 45.0%
GCCATGAATTTGTCAGTCAC+TGG + chr7_3:31179924-31179943 None:intergenic 45.0%
!! CTAGATAGAGGCATCAAGGT+TGG + chr7_3:31179946-31179965 None:intergenic 45.0%
CAACCTTGATGCCTCTATCT+AGG - chr7_3:31179944-31179963 Msa1100780:intron 45.0%
ACCTTGATGCCTCTATCTAG+GGG - chr7_3:31179946-31179965 Msa1100780:intron 45.0%
ATGTTTGGTCCCCTAGATAG+AGG + chr7_3:31179958-31179977 None:intergenic 45.0%
TATCTAGGGGACCAAACATG+TGG - chr7_3:31179959-31179978 Msa1100780:intron 45.0%
GTTCGCAAGCTTAGGAAGTA+AGG + chr7_3:31180015-31180034 None:intergenic 45.0%
GGCAAAGGAACATATCCACA+TGG + chr7_3:31180117-31180136 None:intergenic 45.0%
ACTGCAATACAGACCACACA+AGG + chr7_3:31180287-31180306 None:intergenic 45.0%
! ACAAGAGTGATTTGTCCGCT+AGG + chr7_3:31180876-31180895 None:intergenic 45.0%
!! ATTGCGGATAGCGGAAATAG+CGG + chr7_3:31180986-31181005 None:intergenic 45.0%
GTGTTGTCAATTGCGGATAG+CGG + chr7_3:31180995-31181014 None:intergenic 45.0%
ACAACACTGATCCAGAGCTA+AGG - chr7_3:31181008-31181027 Msa1100780:intron 45.0%
AACTAAACACCGAACTGGTG+TGG - chr7_3:31181070-31181089 Msa1100780:intron 45.0%
!! TCTACCTTTGAGGTCTAGCA+CGG - chr7_3:31181161-31181180 Msa1100780:intron 45.0%
GGCTTAGCCACATCTAGTTA+AGG - chr7_3:31181182-31181201 Msa1100780:intron 45.0%
ATCTGTCGTCGATCTACTGT+AGG - chr7_3:31181210-31181229 Msa1100780:intron 45.0%
TAAGAGATTGAGGGCCTGTT+TGG - chr7_3:31181252-31181271 Msa1100780:intron 45.0%
TCATAAACTCAGGGTCCGTT+TGG + chr7_3:31181477-31181496 None:intergenic 45.0%
CATCATTCGATCACTGGGAA+AGG - chr7_3:31181675-31181694 Msa1100780:intron 45.0%
!! CATGCCACTTTGAGATTCCT+TGG - chr7_3:31181968-31181987 Msa1100780:CDS 45.0%
!!! CTGTTTTTGTCCTCTCTCCT+TGG - chr7_3:31182054-31182073 Msa1100780:CDS 45.0%
!!! ATAAAAAAAAAATACTTTTT+AGG + chr7_3:31176548-31176567 None:intergenic 5.0%
!!! AATAAAAAAAAATACTTTTT+AGG + chr7_3:31176729-31176748 None:intergenic 5.0%
!!! TATTATTTATAAATTTGTTA+AGG + chr7_3:31181396-31181415 None:intergenic 5.0%
CATCAACGCTGTTGTGTGAG+TGG + chr7_3:31175484-31175503 None:intergenic 50.0%
GTTAGGGTTACGGCGTTTGT+TGG + chr7_3:31175519-31175538 None:intergenic 50.0%
!! GAGTGGTTTCGTCGGTGTTA+GGG + chr7_3:31175535-31175554 None:intergenic 50.0%
GTCTCTTGGAGTGGTTTCGT+CGG + chr7_3:31175543-31175562 None:intergenic 50.0%
!! ACGGTAAACGGTGTCGTCTT+GGG + chr7_3:31175579-31175598 None:intergenic 50.0%
!! AACGGTAAACGGTGTCGTCT+TGG + chr7_3:31175580-31175599 None:intergenic 50.0%
TGCGAACAGGGCAAAGGTAA+CGG + chr7_3:31175598-31175617 None:intergenic 50.0%
! CGATTTTGCGAACAGGGCAA+AGG + chr7_3:31175604-31175623 None:intergenic 50.0%
CGAATCGGTGAAACTGTTCC+TGG - chr7_3:31175689-31175708 Msa1100780:three_prime_UTR 50.0%
ACAACACGCTCATCACAACC+AGG + chr7_3:31175710-31175729 None:intergenic 50.0%
GTGATTGCTGAGGATTTGCG+TGG - chr7_3:31175827-31175846 Msa1100780:three_prime_UTR 50.0%
ATTGCTGAGGATTTGCGTGG+TGG - chr7_3:31175830-31175849 Msa1100780:three_prime_UTR 50.0%
CTCAATGTCTGGGCCATGTT+TGG - chr7_3:31175933-31175952 Msa1100780:three_prime_UTR 50.0%
TCGCGACGTTAATGTCGAGT+CGG - chr7_3:31176180-31176199 Msa1100780:three_prime_UTR 50.0%
CGACTGAGGATTCACTGACA+CGG + chr7_3:31176356-31176375 None:intergenic 50.0%
CTTGTGGCGTCTGATCAGAT+TGG - chr7_3:31176895-31176914 Msa1100780:three_prime_UTR 50.0%
GGTGTGTGATTGGGAAAGGT+GGG - chr7_3:31176917-31176936 Msa1100780:three_prime_UTR 50.0%
GTTGTCAATGGCGGCTATTG+CGG - chr7_3:31177346-31177365 Msa1100780:three_prime_UTR 50.0%
GCTTGACAACACTAAGCTCC+AGG + chr7_3:31177508-31177527 None:intergenic 50.0%
! GCGGTTTGTTCAACCACTCA+TGG + chr7_3:31177627-31177646 None:intergenic 50.0%
TCGCTGAATCTGCAGATCTC+TGG - chr7_3:31178022-31178041 Msa1100780:CDS 50.0%
GCTTACTTCTGCAGTTCCTG+GGG - chr7_3:31178123-31178142 Msa1100780:intron 50.0%
!! GGTTCAATGGTGGGTTCTCA+TGG - chr7_3:31178160-31178179 Msa1100780:intron 50.0%
!! TCAATGGTGGGTTCTCATGG+TGG - chr7_3:31178163-31178182 Msa1100780:intron 50.0%
!! CAATGGTGGGTTCTCATGGT+GGG - chr7_3:31178164-31178183 Msa1100780:intron 50.0%
!! AATGGTGGGTTCTCATGGTG+GGG - chr7_3:31178165-31178184 Msa1100780:intron 50.0%
! TCATGGTGGGGCTCCAATTA+TGG - chr7_3:31178177-31178196 Msa1100780:intron 50.0%
! CATGGTGGGGCTCCAATTAT+GGG - chr7_3:31178178-31178197 Msa1100780:intron 50.0%
TGGGGCTCCAATTATGGGAA+TGG - chr7_3:31178183-31178202 Msa1100780:intron 50.0%
CCTCCATAACCACCACCAAT+CGG + chr7_3:31178211-31178230 None:intergenic 50.0%
!! CGATTGGTGGTGGTTATGGA+GGG - chr7_3:31178209-31178228 Msa1100780:intron 50.0%
CTATCCACGGTCCATGTATC+CGG - chr7_3:31178252-31178271 Msa1100780:CDS 50.0%
TATCCACGGTCCATGTATCC+GGG - chr7_3:31178253-31178272 Msa1100780:CDS 50.0%
AAGGGATGAAGGTTCTCCGA+TGG - chr7_3:31178279-31178298 Msa1100780:intron 50.0%
!! GGAGGTGTTATAGGTAAGGG+CGG - chr7_3:31178340-31178359 Msa1100780:intron 50.0%
AATAGCCATTTCGGCGAGAG+AGG - chr7_3:31178444-31178463 Msa1100780:CDS 50.0%
TTCTACCTCTCTCGCCGAAA+TGG + chr7_3:31178452-31178471 None:intergenic 50.0%
TCAACTTTCTCACTGCACCG+GGG + chr7_3:31178643-31178662 None:intergenic 50.0%
CTCTTTCACTAGCCGGTTAC+TGG - chr7_3:31178681-31178700 Msa1100780:intron 50.0%
GAGAGCTTGACACCAGTAAC+CGG + chr7_3:31178696-31178715 None:intergenic 50.0%
! CTGGTGTCAAGCTCTCGAAT+TGG - chr7_3:31178700-31178719 Msa1100780:intron 50.0%
CATCCGCATCCTATCTAAGG+AGG - chr7_3:31178783-31178802 Msa1100780:intron 50.0%
GGGGGAACTAGATATTGCCA+AGG - chr7_3:31178961-31178980 Msa1100780:CDS 50.0%
!! TACTTGCACAAGAGCGTCCT+TGG + chr7_3:31178981-31179000 None:intergenic 50.0%
TATCTTCCTGCTTCGCCAGA+AGG - chr7_3:31179073-31179092 Msa1100780:intron 50.0%
GGTAGAGATGGAAGACGACA+TGG - chr7_3:31179118-31179137 Msa1100780:intron 50.0%
TTTGCATCTGGCGACGGTTA+TGG - chr7_3:31179187-31179206 Msa1100780:CDS 50.0%
GGCGACGGTTATGGAAACTA+TGG - chr7_3:31179196-31179215 Msa1100780:CDS 50.0%
!! ACGGAACGGACTAGTACTTC+TGG - chr7_3:31179382-31179401 Msa1100780:CDS 50.0%
!! CGGAACGGACTAGTACTTCT+GGG - chr7_3:31179383-31179402 Msa1100780:CDS 50.0%
TTGTCCGACAGATTGTCTGG+TGG - chr7_3:31179579-31179598 Msa1100780:intron 50.0%
GTATCTCGGAGGAGAAACCA+TGG - chr7_3:31179603-31179622 Msa1100780:intron 50.0%
GGGAAGGGAAAGGCAACAAA+GGG + chr7_3:31179796-31179815 None:intergenic 50.0%
TGTTTGGATGGGGAAGGGAA+AGG + chr7_3:31179806-31179825 None:intergenic 50.0%
TCAGCTGTTTGGATGGGGAA+GGG + chr7_3:31179811-31179830 None:intergenic 50.0%
CAGTTTAGGCAGTAGGCTTC+AGG + chr7_3:31179846-31179865 None:intergenic 50.0%
CTGAAGCCTACTGCCTAAAC+TGG - chr7_3:31179844-31179863 Msa1100780:intron 50.0%
CGTCTTCCAGTTTAGGCAGT+AGG + chr7_3:31179853-31179872 None:intergenic 50.0%
CTGGAAGACGAGATGAACCA+TGG - chr7_3:31179863-31179882 Msa1100780:intron 50.0%
!! TCCCCTAGATAGAGGCATCA+AGG + chr7_3:31179950-31179969 None:intergenic 50.0%
GAGCACATGTTCGCAAGCTT+AGG + chr7_3:31180023-31180042 None:intergenic 50.0%
! TTTTTCCAGTTCGGCTCCTC+TGG - chr7_3:31180401-31180420 Msa1100780:intron 50.0%
TATAACCAGAGGAGCCGAAC+TGG + chr7_3:31180409-31180428 None:intergenic 50.0%
GCTATAGCGCTATTGCCTAG+CGG - chr7_3:31180858-31180877 Msa1100780:intron 50.0%
AACATCATAGCCGTCCAGGA+TGG + chr7_3:31181042-31181061 None:intergenic 50.0%
TCCTGGACGGCTATGATGTT+AGG - chr7_3:31181042-31181061 Msa1100780:intron 50.0%
TCCTAACATCATAGCCGTCC+AGG + chr7_3:31181046-31181065 None:intergenic 50.0%
TAAGCCGTGCTAGACCTCAA+AGG + chr7_3:31181168-31181187 None:intergenic 50.0%
TTCGATCACTGGGAAAGGCT+AGG - chr7_3:31181680-31181699 Msa1100780:intron 50.0%
GGTTATGAGGACCCAACTGT+TGG - chr7_3:31181891-31181910 Msa1100780:CDS 50.0%
ACATTGCAGACCAAGGAGAG+AGG + chr7_3:31182067-31182086 None:intergenic 50.0%
! GTGGGAACGTTTGTTGCCGT+AGG + chr7_3:31175465-31175484 None:intergenic 55.0%
! AGGGTTACGGCGTTTGTTGG+TGG + chr7_3:31175516-31175535 None:intergenic 55.0%
! GGAGTGGTTTCGTCGGTGTT+AGG + chr7_3:31175536-31175555 None:intergenic 55.0%
!! ATCGGAAGCATCATTGGCCG+CGG - chr7_3:31175620-31175639 Msa1100780:three_prime_UTR 55.0%
CTGACAAGCGCATCCATAGC+AGG + chr7_3:31175794-31175813 None:intergenic 55.0%
CTGCTATGGATGCGCTTGTC+AGG - chr7_3:31175792-31175811 Msa1100780:three_prime_UTR 55.0%
TGGTTTCCGTGTCTGTGGTG+TGG - chr7_3:31175953-31175972 Msa1100780:three_prime_UTR 55.0%
CGCGACGTTAATGTCGAGTC+GGG - chr7_3:31176181-31176200 Msa1100780:three_prime_UTR 55.0%
TCAGGTGGATGGAGGGGATT+TGG - chr7_3:31176858-31176877 Msa1100780:intron 55.0%
! GGATGGAGGGGATTTGGTCA+CGG - chr7_3:31176864-31176883 Msa1100780:intron 55.0%
GGTCACGGCGAAATTGCTTG+TGG - chr7_3:31176879-31176898 Msa1100780:three_prime_UTR 55.0%
GGGTGTGTGATTGGGAAAGG+TGG - chr7_3:31176916-31176935 Msa1100780:three_prime_UTR 55.0%
GTGAGACCGGTGCACAGATT+AGG - chr7_3:31176962-31176981 Msa1100780:three_prime_UTR 55.0%
!! CTCTGATTCAGGTTGCGGCA+CGG - chr7_3:31178068-31178087 Msa1100780:intron 55.0%
TGCAGTTCCTGGGGTGTATG+CGG - chr7_3:31178132-31178151 Msa1100780:intron 55.0%
GTATGCGGTCGGTGGTTCAA+TGG - chr7_3:31178147-31178166 Msa1100780:intron 55.0%
ATGGGAATGGCTCCGATTGG+TGG - chr7_3:31178196-31178215 Msa1100780:intron 55.0%
!! GCTCCGATTGGTGGTGGTTA+TGG - chr7_3:31178205-31178224 Msa1100780:intron 55.0%
!! CCGATTGGTGGTGGTTATGG+AGG - chr7_3:31178208-31178227 Msa1100780:intron 55.0%
GTCCATGTATCCGGGCTCAA+GGG - chr7_3:31178261-31178280 Msa1100780:CDS 55.0%
ATCCCTTGAGCCCGGATACA+TGG + chr7_3:31178266-31178285 None:intergenic 55.0%
TATCCGGGCTCAAGGGATGA+AGG - chr7_3:31178268-31178287 Msa1100780:CDS 55.0%
GAACCTTCATCCCTTGAGCC+CGG + chr7_3:31178274-31178293 None:intergenic 55.0%
! GGTGTTATAGGTAAGGGCGG+TGG - chr7_3:31178343-31178362 Msa1100780:intron 55.0%
! CAGCTGTGCTTTTGCAACCC+CGG - chr7_3:31178623-31178642 Msa1100780:CDS 55.0%
GATGGAAGACGACATGGACG+TGG - chr7_3:31179124-31179143 Msa1100780:intron 55.0%
! TGTCTGGTGGTGTATCTCGG+AGG - chr7_3:31179592-31179611 Msa1100780:intron 55.0%
GGGGAAGGGAAAGGCAACAA+AGG + chr7_3:31179797-31179816 None:intergenic 55.0%
CTCAGCTGTTTGGATGGGGA+AGG + chr7_3:31179812-31179831 None:intergenic 55.0%
TGGCTGTACAGCCTTAGCTC+TGG + chr7_3:31181022-31181041 None:intergenic 55.0%
CTAAGGCTGTACAGCCATCC+TGG - chr7_3:31181025-31181044 Msa1100780:intron 55.0%
CGGACACCACACCACAGACA+CGG + chr7_3:31175962-31175981 None:intergenic 60.0%
GTTCCTGGGGTGTATGCGGT+CGG - chr7_3:31178136-31178155 Msa1100780:intron 60.0%
TGCGGTCGGTGGTTCAATGG+TGG - chr7_3:31178150-31178169 Msa1100780:intron 60.0%
GCGGTCGGTGGTTCAATGGT+GGG - chr7_3:31178151-31178170 Msa1100780:intron 60.0%
GGAATGGCTCCGATTGGTGG+TGG - chr7_3:31178199-31178218 Msa1100780:intron 60.0%
GGTCCATGTATCCGGGCTCA+AGG - chr7_3:31178260-31178279 Msa1100780:CDS 60.0%
TCTGGTCCTTCTGGCGAAGC+AGG + chr7_3:31179082-31179101 None:intergenic 60.0%
GCTTCGCCAGAAGGACCAGA+TGG - chr7_3:31179082-31179101 Msa1100780:intron 60.0%
GGAAGACGACATGGACGTGG+TGG - chr7_3:31179127-31179146 Msa1100780:intron 60.0%
CATATGCGGCAGCTTGGTCG+AGG - chr7_3:31179328-31179347 Msa1100780:CDS 60.0%
! AAACCTTGGTGGGTCCCTGC+AGG - chr7_3:31179632-31179651 Msa1100780:intron 60.0%
!! CTGGGTAGAGGCGTCAAGGT+GGG + chr7_3:31179905-31179924 None:intergenic 60.0%
!! ACTGGGTAGAGGCGTCAAGG+TGG + chr7_3:31179906-31179925 None:intergenic 60.0%
!! GTCACTGGGTAGAGGCGTCA+AGG + chr7_3:31179909-31179928 None:intergenic 60.0%
GGCTGTACAGCCATCCTGGA+CGG - chr7_3:31181029-31181048 Msa1100780:intron 60.0%
!! GGAAGCATCATTGGCCGCGG+CGG - chr7_3:31175623-31175642 Msa1100780:three_prime_UTR 65.0%
GTTTCACGATCTCGCCGCCG+CGG + chr7_3:31175640-31175659 None:intergenic 65.0%
GAGCCCGGATACATGGACCG+TGG + chr7_3:31178259-31178278 None:intergenic 65.0%
ATGCGGCAGCTTGGTCGAGG+TGG - chr7_3:31179331-31179350 Msa1100780:CDS 65.0%
CTACCTGCAGGGACCCACCA+AGG + chr7_3:31179638-31179657 None:intergenic 65.0%
CCACCGACCGCATACACCCC+AGG + chr7_3:31178142-31178161 None:intergenic 70.0%
CCTGGGGTGTATGCGGTCGG+TGG - chr7_3:31178139-31178158 Msa1100780:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 31175357 31182273 31175357 ID=Msa1100780;Name=Msa1100780
chr7_3 mRNA 31175357 31182273 31175357 ID=Msa1100780-mRNA-1;Parent=Msa1100780;Name=Msa1100780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=86|1|1|1|0.75|0.66|9|2382|569
chr7_3 exon 31175357 31176782 31175357 ID=Msa1100780-mRNA-1:exon:6602;Parent=Msa1100780-mRNA-1
chr7_3 exon 31176869 31177803 31176869 ID=Msa1100780-mRNA-1:exon:6601;Parent=Msa1100780-mRNA-1
chr7_3 exon 31177977 31178064 31177977 ID=Msa1100780-mRNA-1:exon:6600;Parent=Msa1100780-mRNA-1
chr7_3 exon 31178226 31178290 31178226 ID=Msa1100780-mRNA-1:exon:6599;Parent=Msa1100780-mRNA-1
chr7_3 exon 31178402 31178674 31178402 ID=Msa1100780-mRNA-1:exon:6598;Parent=Msa1100780-mRNA-1
chr7_3 exon 31178784 31179041 31178784 ID=Msa1100780-mRNA-1:exon:6597;Parent=Msa1100780-mRNA-1
chr7_3 exon 31179165 31179593 31179165 ID=Msa1100780-mRNA-1:exon:6596;Parent=Msa1100780-mRNA-1
chr7_3 exon 31180589 31180768 31180589 ID=Msa1100780-mRNA-1:exon:6595;Parent=Msa1100780-mRNA-1
chr7_3 exon 31181750 31182273 31181750 ID=Msa1100780-mRNA-1:exon:6594;Parent=Msa1100780-mRNA-1
chr7_3 five_prime_UTR 31182188 31182273 31182188 ID=Msa1100780-mRNA-1:five_prime_utr;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31181750 31182187 31181750 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31180589 31180768 31180589 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31179165 31179593 31179165 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31178784 31179041 31178784 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31178402 31178674 31178402 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31178226 31178290 31178226 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 CDS 31177998 31178064 31177998 ID=Msa1100780-mRNA-1:cds;Parent=Msa1100780-mRNA-1
chr7_3 three_prime_UTR 31177977 31177997 31177977 ID=Msa1100780-mRNA-1:three_prime_utr;Parent=Msa1100780-mRNA-1
chr7_3 three_prime_UTR 31176869 31177803 31176869 ID=Msa1100780-mRNA-1:three_prime_utr;Parent=Msa1100780-mRNA-1
chr7_3 three_prime_UTR 31175357 31176782 31175357 ID=Msa1100780-mRNA-1:three_prime_utr;Parent=Msa1100780-mRNA-1
Gene Sequence

>Msa1100780

ATGGCTGGTCAAAGAACATCCTACGGCAACAAACGTTCCCACTCACACAACAGCGTTGATGACAACAGAACCACCAACAAACGCCGTAACCCTAACACCGACGAAACCACTCCAAGAGACACATTTCACATAACCCAAGACGACACCGTTTACCGTTACCTTTGCCCTGTTCGCAAAATCGGAAGCATCATTGGCCGCGGCGGCGAGATCGTGAAACAACTACGTCTTGATACTAAGGCGAAGATTCGAATCGGTGAAACTGTTCCTGGTTGTGATGAGCGTGTTGTTACGGTTTATAGTGTTTCTGATGAATCGAATGATTTTGAAGATTCTGGTGAGTTTATGTGTCCTGCTATGGATGCGCTTGTCAGGATTCATCAGAAGGTGATTGCTGAGGATTTGCGTGGTGGTGAAGATGAAGACGTTGATATGGAGAAGGTGGATGGAGGGGATTTGGTCACGGCGAAATTGCTTGTGGCGTCTGATCAGATTGGGTGTGTGATTGGGAAAGGTGGGCAGATTGTTCAGAATATAAGGAGTGAGACCGGTGCACAGATTAGGATTCTTAAGGATGATCGGCTGCCACTTTGTGCGCTGAATTCTGATGAGCTTGTTCAGATCTCTGGTGAGATTGCTGTTGTGAAAAAGGCTCTGATTCAGGTTGCGGCACGGCTTCATGACAACCCTTCACGTACTCAACATTTGCTTACTTCTGCAGTTCCTGGGGTGTATGCGGTCGGTGGTTCAATGGTGGGTTCTCATGGTGGGGCTCCAATTATGGGAATGGCTCCGATTGGTGGTGGTTATGGAGGGTATAAAGGTGATGTTGGAGACTATCCACGGTCCATGTATCCGGGCTCAAGGGATGAAGGTTCTCCGATGGAGTTTTCAGTCCGATTTGTTTGTCCAACTGCTAACATTGGAGGTGTTATAGGTAAGGGCGGTGGTATAATAAATCAAATTAGGCAGGATTCTGGGGCAAATATCAAGGTTGATAGTTCGGCAACTGAAGGAGATGACTGCTTAATAGCCATTTCGGCGAGAGAGTTCTTTGAGGATTCATTCTCCGCAACAATTGAAGCAGCTGTGCTTTTGCAACCCCGGTGCAGTGAGAAAGTTGAAAGAGATTCTGGTATTCTCTCTTTCACTAGCCGGTTACTGGTGTCAAGCTCTCGAATTGGTTGCCTTATTGGTAAAGGAGGATCAATCATTACTGAGATGAGAAGGCTTACAAAAGCTAACATCCGCATCCTATCTAAGGAGGATCTCCCTAAAATTGCAACTGAAGATGATGAAATGGTGCAGATTTCGGGGGAACTAGATATTGCCAAGGACGCTCTTGTGCAAGTACTTACCCGGCTGAGAGCAAATCTTTTTGATAAGGAGCGTTCTGTCTCATCATTGCTTCCACCAGTACTTGCATATCTTCCTGCTTCGCCAGAAGGACCAGATGGTTTCAACTATGAAGGTAGAGATGGAAGACGACATGGACGTGGTGGCTATTCTTATTCTGATGGCTATGGAGGCTCAAGTGATTTTGCATCTGGCGACGGTTATGGAAACTATGGAAGTTCACAGCTTGGTCGAGGTGGTCCTTATGGAGCTTATGGAAGTTATGCTACGGAACGGACTAGTACTTCTGGATTGTCTGATAGATTGTCCGACAGATTGTCTGGTGGTGTATCTCGGAGGAGAAACCATGGTTACTAA
Protein sequence

>Msa1100780

MAGQRTSYGNKRSHSHNSVDDNRTTNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGGEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVYAVGGSMVGSHGGAPIMGMAPIGGGYGGYKGDVGDYPRSMYPGSRDEGSPMEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISAREFFEDSFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALVQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGPDGFNYEGRDGRRHGRGGYSYSDGYGGSSDFASGDGYGNYGSSQLGRGGPYGAYGSYATERTSTSGLSDRLSDRLSGGVSRRRNHGY*