Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512640 | XP_013461155.1 | 98.592 | 355 | 3 | 1 | 1 | 353 | 1 | 355 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512640 | sp|Q803I2|ERGI3_DANRE | 36.364 | 385 | 186 | 6 | 7 | 348 | 7 | 375 | 6.78e-72 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512640 | A0A072UZF4 | 98.592 | 355 | 3 | 1 | 1 | 353 | 1 | 355 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa0512640 | 0.803210 | 3.886648e-49 | -8.615850e-47 |
| Msa0420600 | Msa0512640 | 0.982007 | 5.358503e-154 | -8.615850e-47 |
| Msa0422070 | Msa0512640 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0273590 | Msa0512640 | -0.824515 | 7.742431e-54 | -8.615850e-47 |
| Msa0512640 | Msa0570600 | 0.830185 | 3.386126e-55 | -8.615850e-47 |
| Msa0512640 | Msa0695140 | 0.811719 | 6.083164e-51 | -8.615850e-47 |
| Msa0512640 | Msa0697520 | 0.801191 | 1.011436e-48 | -8.615850e-47 |
| Msa0512640 | Msa0748480 | 0.804923 | 1.711241e-49 | -8.615850e-47 |
| Msa0512640 | Msa0837000 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0512640 | Msa1048980 | 0.807657 | 4.541567e-50 | -8.615850e-47 |
| Msa0512640 | Msa1100780 | 0.804620 | 1.978964e-49 | -8.615850e-47 |
| Msa0512640 | Msa1100870 | 0.810453 | 1.144095e-50 | -8.615850e-47 |
| Msa0512640 | Msa1126870 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa0512640 | Msa1199870 | 0.822538 | 2.245836e-53 | -8.615850e-47 |
| Msa0512640 | Msa1202470 | 0.831310 | 1.795210e-55 | -8.615850e-47 |
| Msa0512640 | Msa1210850 | 0.802607 | 5.177498e-49 | -8.615850e-47 |
| Msa0512640 | Msa1254910 | 0.823514 | 1.329879e-53 | -8.615850e-47 |
| Msa0512640 | Msa1403940 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512640 | MtrunA17_Chr3g0120271 | 98.592 | 355 | 3 | 1 | 1 | 353 | 1 | 355 | 0.0 | 723 |
| Msa0512640 | MtrunA17_Chr5g0425571 | 36.074 | 377 | 200 | 5 | 7 | 348 | 8 | 378 | 4.24e-76 | 239 |
| Msa0512640 | MtrunA17_Chr4g0050511 | 35.616 | 365 | 200 | 8 | 7 | 340 | 8 | 368 | 1.58e-71 | 227 |
| Msa0512640 | MtrunA17_Chr4g0041801 | 32.243 | 214 | 105 | 8 | 159 | 348 | 273 | 470 | 1.95e-17 | 83.2 |
| Msa0512640 | MtrunA17_Chr2g0319621 | 31.925 | 213 | 111 | 9 | 162 | 353 | 223 | 422 | 4.03e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512640 | AT3G22290.2 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| Msa0512640 | AT3G22290.1 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| Msa0512640 | AT1G36050.2 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.08e-73 | 233 |
| Msa0512640 | AT1G22200.1 | 34.121 | 381 | 214 | 6 | 1 | 348 | 2 | 378 | 1.13e-72 | 231 |
| Msa0512640 | AT1G36050.1 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.33e-72 | 233 |
| Msa0512640 | AT1G22200.2 | 33.333 | 339 | 189 | 6 | 1 | 306 | 2 | 336 | 2.65e-58 | 192 |
| Msa0512640 | AT4G27080.1 | 29.839 | 248 | 133 | 10 | 121 | 340 | 231 | 465 | 4.99e-20 | 91.3 |
| Msa0512640 | AT4G27080.2 | 29.839 | 248 | 133 | 10 | 121 | 340 | 283 | 517 | 6.50e-20 | 91.3 |
| Msa0512640 | AT3G20560.1 | 30.651 | 261 | 143 | 11 | 121 | 353 | 231 | 481 | 8.02e-19 | 87.8 |
| Msa0512640 | AT1G50950.1 | 30.415 | 217 | 121 | 8 | 152 | 348 | 271 | 477 | 5.20e-17 | 82.4 |
| Msa0512640 | AT1G50950.2 | 30.415 | 217 | 121 | 8 | 152 | 348 | 276 | 482 | 5.67e-17 | 82.4 |
Find 96 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTCTGTTGCAGGTTTA+TGG | 0.190697 | 3_4:-62548805 | Msa0512640:intron |
| GTTATGAATTCCTGGATATT+TGG | 0.195825 | 3_4:+62548221 | None:intergenic |
| TTATGAATTCCTGGATATTT+GGG | 0.205707 | 3_4:+62548222 | None:intergenic |
| AAAATTCAAAAGGGGCAAAA+TGG | 0.213453 | 3_4:-62553512 | Msa0512640:exon |
| AAGAGATTCCAGGCACTATT+TGG | 0.222277 | 3_4:-62547097 | Msa0512640:three_prime_UTR |
| AACAGTTATGGACAGATAAT+TGG | 0.226761 | 3_4:-62550811 | Msa0512640:CDS |
| TCAAGTCTTTGTGTTGGTTT+TGG | 0.248239 | 3_4:+62553724 | None:intergenic |
| GATCATTGGTTTGATTATAA+TGG | 0.293746 | 3_4:-62553275 | Msa0512640:CDS |
| GTTATCCATGATTTGTCATT+TGG | 0.304688 | 3_4:-62548246 | Msa0512640:CDS |
| TGCCTCCTTCACCTTCTTGA+TGG | 0.309665 | 3_4:+62548930 | None:intergenic |
| AATGTCATATTTATATGAAT+TGG | 0.314883 | 3_4:+62552464 | None:intergenic |
| TTAGCCCATGCACTGAAATA+TGG | 0.324151 | 3_4:+62548749 | None:intergenic |
| CAGCTTCGTTTGAACAGTTA+TGG | 0.327126 | 3_4:-62550823 | Msa0512640:CDS |
| TTGATTGCAGTTTCGATCAT+TGG | 0.357208 | 3_4:-62553289 | Msa0512640:intron |
| CGATCAAATTGACTAGTAAT+GGG | 0.358497 | 3_4:+62547979 | None:intergenic |
| TTAGATGTTCAAAGGGTTGC+TGG | 0.373432 | 3_4:-62548778 | Msa0512640:CDS |
| GGTGGAACCTTTGCTGTAAC+AGG | 0.373701 | 3_4:-62547754 | Msa0512640:intron |
| TATATCTGATCTTGTTGAAA+AGG | 0.380648 | 3_4:-62550779 | Msa0512640:CDS |
| TCAATTCATCAAAATTCAAA+AGG | 0.390677 | 3_4:-62553522 | Msa0512640:five_prime_UTR |
| TCAAGTGGGTTATGAATTCC+TGG | 0.392656 | 3_4:+62548213 | None:intergenic |
| TCCTTGATAGTGACAGTAAT+AGG | 0.399502 | 3_4:+62547826 | None:intergenic |
| CCGATCAAATTGACTAGTAA+TGG | 0.408677 | 3_4:+62547978 | None:intergenic |
| AAACATATATGTTGCACAAA+TGG | 0.412036 | 3_4:-62548728 | Msa0512640:intron |
| TACAACTTACACTGTTCATC+AGG | 0.414564 | 3_4:-62553218 | Msa0512640:intron |
| ATGTTGATGCTTGATTCAAC+TGG | 0.415899 | 3_4:+62547036 | None:intergenic |
| CTGCATCTCCAAGAGATTCC+AGG | 0.420293 | 3_4:-62547107 | Msa0512640:three_prime_UTR |
| TACGTTGTTTCTGCACGAGT+TGG | 0.429726 | 3_4:-62553251 | Msa0512640:CDS |
| AAATTCAAAAGGGGCAAAAT+GGG | 0.434055 | 3_4:-62553511 | Msa0512640:exon |
| GAAGAAAACAAAACACCTTC+GGG | 0.440498 | 3_4:-62553690 | Msa0512640:five_prime_UTR |
| CACCTAGCACGGCACAAAGC+CGG | 0.441915 | 3_4:+62547773 | None:intergenic |
| TTCCCTTCTTTACCTTGTGA+TGG | 0.448996 | 3_4:-62552443 | Msa0512640:intron |
| AGAAGAAAACAAAACACCTT+CGG | 0.449583 | 3_4:-62553691 | Msa0512640:five_prime_UTR |
| AAAACTCAATCTGGTGCTCT+TGG | 0.451292 | 3_4:-62553427 | Msa0512640:intron |
| GAGATATATCTATATTCAGT+TGG | 0.453984 | 3_4:+62548051 | None:intergenic |
| CAATTTGATCGGACATGGCC+AGG | 0.454262 | 3_4:-62547967 | Msa0512640:intron |
| TCATTTGGCCCCAAATATCC+AGG | 0.465213 | 3_4:-62548231 | Msa0512640:CDS |
| AATTTCCATATTTCAGTGCA+TGG | 0.466918 | 3_4:-62548754 | Msa0512640:CDS |
| TTGTTGCAGAAAACTCAATC+TGG | 0.467399 | 3_4:-62553436 | Msa0512640:CDS |
| CAATTCATCAAAATTCAAAA+GGG | 0.468077 | 3_4:-62553521 | Msa0512640:five_prime_UTR |
| ACCTAGCACGGCACAAAGCC+GGG | 0.468081 | 3_4:+62547774 | None:intergenic |
| TGGATCTTGATACAAACATA+TGG | 0.471383 | 3_4:-62552249 | Msa0512640:CDS |
| CTGGAATCTCTTGGAGATGC+AGG | 0.474708 | 3_4:+62547108 | None:intergenic |
| ACGTTGTTTCTGCACGAGTT+GGG | 0.475844 | 3_4:-62553250 | Msa0512640:CDS |
| ATATCTGATCTTGTTGAAAA+GGG | 0.476430 | 3_4:-62550778 | Msa0512640:CDS |
| AAATAGTGCCTGGAATCTCT+TGG | 0.484799 | 3_4:+62547099 | None:intergenic |
| TGGGGCCAAATGACAAATCA+TGG | 0.487288 | 3_4:+62548241 | None:intergenic |
| TGCGTAGAGTTGCACAACTA+CGG | 0.491367 | 3_4:+62546878 | None:intergenic |
| TGATGAAAATGTGATGTGAA+TGG | 0.495946 | 3_4:+62553631 | None:intergenic |
| GCGGGTGGTTGAAGAAGAAC+CGG | 0.498959 | 3_4:-62553666 | Msa0512640:five_prime_UTR |
| AGTAAATTCCAAATAGTGCC+TGG | 0.500643 | 3_4:+62547089 | None:intergenic |
| AACAAAACACCTTCGGGAGC+GGG | 0.502563 | 3_4:-62553684 | Msa0512640:five_prime_UTR |
| GCCTATTACTGTCACTATCA+AGG | 0.504629 | 3_4:-62547827 | Msa0512640:CDS |
| CGGCTTTGTGCCGTGCTAGG+TGG | 0.508099 | 3_4:-62547772 | Msa0512640:CDS |
| ACCCGGCTTTGTGCCGTGCT+AGG | 0.512689 | 3_4:-62547775 | Msa0512640:CDS |
| ATTTCCATATTTCAGTGCAT+GGG | 0.517261 | 3_4:-62548753 | Msa0512640:CDS |
| TAACCATCACAAGGTAAAGA+AGG | 0.521720 | 3_4:+62552440 | None:intergenic |
| ATTTACATCAACAGGCATGC+TGG | 0.524484 | 3_4:-62547219 | Msa0512640:intron |
| GCGTAGAGTTGCACAACTAC+GGG | 0.527127 | 3_4:+62546879 | None:intergenic |
| GTGGATGCCATTGATATGTC+TGG | 0.530136 | 3_4:-62552283 | Msa0512640:CDS |
| CTAGTCAATTTGATCGGACA+TGG | 0.531079 | 3_4:-62547972 | Msa0512640:CDS |
| CAACAGGCATGCTGGACCGT+TGG | 0.533592 | 3_4:-62547211 | Msa0512640:intron |
| ATCCTTGATGTCTCATCAAG+TGG | 0.543339 | 3_4:+62548198 | None:intergenic |
| ATGTCACTGCAGACACTACA+AGG | 0.546917 | 3_4:+62546981 | None:intergenic |
| AAAATTACCTGTTACAGCAA+AGG | 0.551485 | 3_4:+62547747 | None:intergenic |
| AAACAAAACACCTTCGGGAG+CGG | 0.561010 | 3_4:-62553685 | Msa0512640:five_prime_UTR |
| TTTCTCCAGATCTTCGATGC+GGG | 0.565812 | 3_4:-62548291 | Msa0512640:intron |
| AGCAAAGGTTCCACCTAGCA+CGG | 0.569794 | 3_4:+62547762 | None:intergenic |
| CCATTACTAGTCAATTTGAT+CGG | 0.571487 | 3_4:-62547978 | Msa0512640:CDS |
| CTTCAACCACCCGCTCCCGA+AGG | 0.572548 | 3_4:+62553675 | None:intergenic |
| AACCATCACAAGGTAAAGAA+GGG | 0.577515 | 3_4:+62552441 | None:intergenic |
| ATGTTTGCCAGACATATCAA+TGG | 0.583808 | 3_4:+62552276 | None:intergenic |
| AATTCATCAAAATTCAAAAG+GGG | 0.589709 | 3_4:-62553520 | Msa0512640:five_prime_UTR |
| CACTGAAAATACCATCAAGA+AGG | 0.590106 | 3_4:-62548941 | Msa0512640:CDS |
| TACCATCAAGAAGGTGAAGG+AGG | 0.599854 | 3_4:-62548932 | Msa0512640:CDS |
| ACCCACTTGATGAGACATCA+AGG | 0.600922 | 3_4:-62548200 | Msa0512640:CDS |
| GATCAAATTGACTAGTAATG+GGG | 0.602587 | 3_4:+62547980 | None:intergenic |
| AAATACCATCAAGAAGGTGA+AGG | 0.608112 | 3_4:-62548935 | Msa0512640:CDS |
| TCCTTGATGTCTCATCAAGT+GGG | 0.612215 | 3_4:+62548199 | None:intergenic |
| ATCAAATTGACTAGTAATGG+GGG | 0.614743 | 3_4:+62547981 | None:intergenic |
| GAAAATGTGATGTGAATGGA+AGG | 0.617541 | 3_4:+62553635 | None:intergenic |
| GTAACTGAGAACTGATTAGT+CGG | 0.619257 | 3_4:+62548015 | None:intergenic |
| AGGATTCTGCATGATGCGAG+TGG | 0.621286 | 3_4:-62548180 | Msa0512640:CDS |
| TATGAATTCCTGGATATTTG+GGG | 0.621776 | 3_4:+62548223 | None:intergenic |
| CAACGAGTCTGTACATCCAA+CGG | 0.621907 | 3_4:+62547195 | None:intergenic |
| AAAACACCTTCGGGAGCGGG+TGG | 0.625872 | 3_4:-62553681 | Msa0512640:five_prime_UTR |
| AACAAATGATCCTCTGTGCG+AGG | 0.627162 | 3_4:+62553454 | None:intergenic |
| TAATAAAATGAAGAAAACTA+CGG | 0.637932 | 3_4:+62547797 | None:intergenic |
| GATCATAACACACACAAGCA+TGG | 0.641030 | 3_4:-62550745 | Msa0512640:intron |
| TGTTGATGCTTGATTCAACT+GGG | 0.641158 | 3_4:+62547037 | None:intergenic |
| TGAATGGAAGGAGCTACCAC+CGG | 0.645767 | 3_4:+62553647 | None:intergenic |
| TATGTCTGGCAAACATGAGG+TGG | 0.662844 | 3_4:-62552269 | Msa0512640:CDS |
| TGCTGGTGCTAACCATCACA+AGG | 0.671676 | 3_4:+62552431 | None:intergenic |
| ATGTCTGTAGACTTGAAGCG+TGG | 0.684678 | 3_4:-62552497 | Msa0512640:CDS |
| GGTGGTTGAAGAAGAACCGG+TGG | 0.697234 | 3_4:-62553663 | Msa0512640:five_prime_UTR |
| TGATATGTCTGGCAAACATG+AGG | 0.701769 | 3_4:-62552272 | Msa0512640:CDS |
| CGATGCATTTCCTCGCACAG+AGG | 0.733486 | 3_4:-62553464 | Msa0512640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTTAATATAATAAGATA+TGG | + | chr3_4:62548676-62548695 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTAATAAATTTCT+GGG | - | chr3_4:62550391-62550410 | Msa0512640:intron | 10.0% |
| !!! | AACTTTTAAATACTATATAA+AGG | - | chr3_4:62552351-62552370 | Msa0512640:intron | 10.0% |
| !!! | ATTATTAAATATTGATTTTC+TGG | - | chr3_4:62553192-62553211 | Msa0512640:intron | 10.0% |
| !! | AACAAAAAATCTAAACTTTA+AGG | + | chr3_4:62547143-62547162 | None:intergenic | 15.0% |
| !!! | TTGTATTTAATTTTGGAATA+AGG | - | chr3_4:62547491-62547510 | Msa0512640:intron | 15.0% |
| !! | TTTGATATGTTGATATTATT+TGG | - | chr3_4:62547886-62547905 | Msa0512640:intron | 15.0% |
| !! | AATGTCATATTTATATGAAT+TGG | + | chr3_4:62548047-62548066 | None:intergenic | 15.0% |
| !! | TAAATAGTTTCTTAATATGT+TGG | - | chr3_4:62548362-62548381 | Msa0512640:intron | 15.0% |
| !! | TTCATTATATACATAAACTT+CGG | - | chr3_4:62549154-62549173 | Msa0512640:intron | 15.0% |
| !! | ATTACTTATTTAAACACAAA+CGG | + | chr3_4:62549941-62549960 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTCTATTAAAAT+TGG | + | chr3_4:62550043-62550062 | None:intergenic | 15.0% |
| !! | TAAAAGTTAAATTTAACATC+AGG | - | chr3_4:62550209-62550228 | Msa0512640:intron | 15.0% |
| !!! | CTTTTTGTTTAATAAATTTC+TGG | - | chr3_4:62550390-62550409 | Msa0512640:intron | 15.0% |
| !!! | TTTTGTTTAATAAATTTCTG+GGG | - | chr3_4:62550392-62550411 | Msa0512640:intron | 15.0% |
| !! | ATATTAAGTTTCTTTCAAAT+TGG | + | chr3_4:62551678-62551697 | None:intergenic | 15.0% |
| !!! | TCTTATTAAAGTTATTTCTT+TGG | + | chr3_4:62552085-62552104 | None:intergenic | 15.0% |
| !!! | ATTCATAATTTAAAACATGA+AGG | + | chr3_4:62552161-62552180 | None:intergenic | 15.0% |
| !! | TAATAAAATGAAGAAAACTA+CGG | + | chr3_4:62552714-62552733 | None:intergenic | 15.0% |
| !! | TATAATAAAAAACATTTGAC+TGG | - | chr3_4:62552894-62552913 | Msa0512640:intron | 15.0% |
| !! | TCAATTCATCAAAATTCAAA+AGG | - | chr3_4:62546986-62547005 | Msa0512640:three_prime_UTR | 20.0% |
| !! | CAATTCATCAAAATTCAAAA+GGG | - | chr3_4:62546987-62547006 | Msa0512640:three_prime_UTR | 20.0% |
| !! | AATTCATCAAAATTCAAAAG+GGG | - | chr3_4:62546988-62547007 | Msa0512640:three_prime_UTR | 20.0% |
| !!! | CTAAACTTTAAGGAAAAAAA+TGG | + | chr3_4:62547133-62547152 | None:intergenic | 20.0% |
| !! | ACATAAAAAGAAATCCAAAA+AGG | + | chr3_4:62548305-62548324 | None:intergenic | 20.0% |
| !!! | ATGTTGTTAAAAAGTTTTAG+TGG | - | chr3_4:62548852-62548871 | Msa0512640:intron | 20.0% |
| !! | ATATGCTTATATCACTATAT+TGG | - | chr3_4:62549200-62549219 | Msa0512640:intron | 20.0% |
| !!! | TATATCACTATATTGGTTTT+TGG | - | chr3_4:62549207-62549226 | Msa0512640:intron | 20.0% |
| !!! | ATATCACTATATTGGTTTTT+GGG | - | chr3_4:62549208-62549227 | Msa0512640:intron | 20.0% |
| !!! | AATTTCTTCTTTTTAATTCC+GGG | + | chr3_4:62549264-62549283 | None:intergenic | 20.0% |
| !!! | CAATTTCTTCTTTTTAATTC+CGG | + | chr3_4:62549265-62549284 | None:intergenic | 20.0% |
| !! | GTATTATAAATAAGTCCATT+CGG | + | chr3_4:62549402-62549421 | None:intergenic | 20.0% |
| !!! | GTTGTTACTTGTTAATTAAT+AGG | - | chr3_4:62549564-62549583 | Msa0512640:intron | 20.0% |
| !! | AAATAACCATTAATGATACA+GGG | + | chr3_4:62549641-62549660 | None:intergenic | 20.0% |
| !! | TAAATAACCATTAATGATAC+AGG | + | chr3_4:62549642-62549661 | None:intergenic | 20.0% |
| !!! | TAGATTCATTTCCTTTTTTT+GGG | - | chr3_4:62549879-62549898 | Msa0512640:intron | 20.0% |
| !! | TTACTTATTTAAACACAAAC+GGG | + | chr3_4:62549940-62549959 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCCATTTCATTA+GGG | + | chr3_4:62550687-62550706 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTCCATTTCATT+AGG | + | chr3_4:62550688-62550707 | None:intergenic | 20.0% |
| !! | AAAAATAGACATCAATTCAA+AGG | - | chr3_4:62550704-62550723 | Msa0512640:intron | 20.0% |
| !! | AAAATAGACATCAATTCAAA+GGG | - | chr3_4:62550705-62550724 | Msa0512640:intron | 20.0% |
| !! | ATAGAGAGAAATTAAATCAT+AGG | + | chr3_4:62551276-62551295 | None:intergenic | 20.0% |
| !! | ATTTAGAAAAACATGATTTC+TGG | + | chr3_4:62551348-62551367 | None:intergenic | 20.0% |
| !!! | ATTCTTTTATAGTTCTTTTC+TGG | - | chr3_4:62551449-62551468 | Msa0512640:intron | 20.0% |
| !!! | TTCTAGGAAAAAATATTTCA+AGG | + | chr3_4:62551897-62551916 | None:intergenic | 20.0% |
| !! | TTACTTATTTGCAGTTATTT+GGG | + | chr3_4:62552007-62552026 | None:intergenic | 20.0% |
| !! | TTTACTTATTTGCAGTTATT+TGG | + | chr3_4:62552008-62552027 | None:intergenic | 20.0% |
| !! | TAACTGCAAATAAGTAAATA+AGG | - | chr3_4:62552010-62552029 | Msa0512640:intron | 20.0% |
| !!! | TCTTGAATATTGTTTTAACA+TGG | - | chr3_4:62552392-62552411 | Msa0512640:intron | 20.0% |
| !!! | CATTATACATTTATGAGTTT+TGG | - | chr3_4:62552585-62552604 | Msa0512640:intron | 20.0% |
| !! | AGCTTAAAACTATAATCATA+TGG | + | chr3_4:62552818-62552837 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAAGTCTTTGTGT+TGG | + | chr3_4:62546793-62546812 | None:intergenic | 25.0% |
| ! | TTAAGGAAAAAAATGGATCA+GGG | + | chr3_4:62547126-62547145 | None:intergenic | 25.0% |
| ! | TTTAAGGAAAAAAATGGATC+AGG | + | chr3_4:62547127-62547146 | None:intergenic | 25.0% |
| !!! | GATCATTGGTTTGATTATAA+TGG | - | chr3_4:62547233-62547252 | Msa0512640:intron | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+TGG | + | chr3_4:62547389-62547408 | None:intergenic | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+TGG | + | chr3_4:62547389-62547408 | None:intergenic | 25.0% |
| !! | TTTTCATAAGTTCTTCAAGA+TGG | + | chr3_4:62547641-62547660 | None:intergenic | 25.0% |
| !! | TATTTAGTGCCTTTTTAGAT+TGG | + | chr3_4:62547779-62547798 | None:intergenic | 25.0% |
| !!! | CTAAAAAGGCACTAAATAAA+AGG | - | chr3_4:62547781-62547800 | Msa0512640:CDS | 25.0% |
| !! | TATTTAGTGCCTTTTTAGAT+TGG | + | chr3_4:62547779-62547798 | None:intergenic | 25.0% |
| !!! | CTAAAAAGGCACTAAATAAA+AGG | - | chr3_4:62547781-62547800 | Msa0512640:CDS | 25.0% |
| ! | ACTTATGCTAATATACACAT+AGG | + | chr3_4:62547852-62547871 | None:intergenic | 25.0% |
| ! | TGTGTATATTAGCAAAAGTT+GGG | - | chr3_4:62547947-62547966 | Msa0512640:intron | 25.0% |
| !! | GGATTTCTTTTTATGTGTTT+TGG | - | chr3_4:62548309-62548328 | Msa0512640:intron | 25.0% |
| ! | TAGACAAATATTGCTTACTT+TGG | - | chr3_4:62548494-62548513 | Msa0512640:intron | 25.0% |
| !!! | TTAAAAAGTTTTAGTGGAGA+AGG | - | chr3_4:62548858-62548877 | Msa0512640:intron | 25.0% |
| !!! | TAAAAAGTTTTAGTGGAGAA+GGG | - | chr3_4:62548859-62548878 | Msa0512640:intron | 25.0% |
| ! | AAGAGATAATTGATGAAGAA+AGG | + | chr3_4:62548965-62548984 | None:intergenic | 25.0% |
| ! | CAAACATACAAATTAACAGA+AGG | + | chr3_4:62549029-62549048 | None:intergenic | 25.0% |
| !! | TCAATTATTCTGTTTTCTTC+TGG | - | chr3_4:62549110-62549129 | Msa0512640:intron | 25.0% |
| ! | TAGTGATATAAGCATATTGT+AGG | + | chr3_4:62549197-62549216 | None:intergenic | 25.0% |
| ! | AAATAGACTTAAGATCAGAA+GGG | + | chr3_4:62549378-62549397 | None:intergenic | 25.0% |
| ! | AAAATAGACTTAAGATCAGA+AGG | + | chr3_4:62549379-62549398 | None:intergenic | 25.0% |
| ! | GGGATTAAGAATACTAAAAA+GGG | + | chr3_4:62549621-62549640 | None:intergenic | 25.0% |
| ! | AGGGATTAAGAATACTAAAA+AGG | + | chr3_4:62549622-62549641 | None:intergenic | 25.0% |
| !!! | GTTATTTACGCTAATTTGTT+TGG | - | chr3_4:62549654-62549673 | Msa0512640:intron | 25.0% |
| ! | TATATCTGATCTTGTTGAAA+AGG | - | chr3_4:62549729-62549748 | Msa0512640:intron | 25.0% |
| ! | ATATCTGATCTTGTTGAAAA+GGG | - | chr3_4:62549730-62549749 | Msa0512640:intron | 25.0% |
| !!! | GTAATTTTAACCTACAGTTT+TGG | + | chr3_4:62549818-62549837 | None:intergenic | 25.0% |
| ! | AACTGTAGGTTAAAATTACA+TGG | - | chr3_4:62549819-62549838 | Msa0512640:intron | 25.0% |
| !!! | GTAGATTCATTTCCTTTTTT+TGG | - | chr3_4:62549878-62549897 | Msa0512640:intron | 25.0% |
| !!! | AGATTCATTTCCTTTTTTTG+GGG | - | chr3_4:62549880-62549899 | Msa0512640:intron | 25.0% |
| !!! | CTTTTTTTGGGGATAATAAA+GGG | - | chr3_4:62549891-62549910 | Msa0512640:intron | 25.0% |
| ! | AGTTAAATTTAACATCAGGT+TGG | - | chr3_4:62550213-62550232 | Msa0512640:intron | 25.0% |
| ! | ACGATCTATTATTAAACTAC+AGG | - | chr3_4:62550361-62550380 | Msa0512640:intron | 25.0% |
| !!! | TTTTTTCTCCATTTCATTAG+GGG | + | chr3_4:62550686-62550705 | None:intergenic | 25.0% |
| ! | TTCAAAGGGATCTTATATAT+AGG | - | chr3_4:62550719-62550738 | Msa0512640:intron | 25.0% |
| ! | TCAAAGGGATCTTATATATA+GGG | - | chr3_4:62550720-62550739 | Msa0512640:intron | 25.0% |
| !!! | CTTTGTTTGGTTCAAAATTT+TGG | + | chr3_4:62551156-62551175 | None:intergenic | 25.0% |
| ! | ATTTATGAACGTTCTTTGTT+TGG | + | chr3_4:62551169-62551188 | None:intergenic | 25.0% |
| ! | TAAAAATTGTCAACAGATGA+TGG | - | chr3_4:62551487-62551506 | Msa0512640:intron | 25.0% |
| !! | ATTTAGTTTAATTCTGTTGC+AGG | - | chr3_4:62551696-62551715 | Msa0512640:intron | 25.0% |
| ! | AAACATATATGTTGCACAAA+TGG | - | chr3_4:62551780-62551799 | Msa0512640:intron | 25.0% |
| !!! | TATTTTTTCCTAGAACTTAC+AGG | - | chr3_4:62551902-62551921 | Msa0512640:intron | 25.0% |
| ! | AAAACCATCACTATCAAATT+AGG | + | chr3_4:62552200-62552219 | None:intergenic | 25.0% |
| ! | TTATGAATTCCTGGATATTT+GGG | + | chr3_4:62552289-62552308 | None:intergenic | 25.0% |
| ! | GAGATATATCTATATTCAGT+TGG | + | chr3_4:62552460-62552479 | None:intergenic | 25.0% |
| !! | GTTTTCTTCATTTTATTACC+CGG | - | chr3_4:62552716-62552735 | Msa0512640:intron | 25.0% |
| !!! | ATAGTTTTAAGCTATAGCTT+TGG | - | chr3_4:62552825-62552844 | Msa0512640:intron | 25.0% |
| !!! | AGGAAGAATTTTAATCTGTA+AGG | + | chr3_4:62553221-62553240 | None:intergenic | 25.0% |
| ! | GCAAGAAACAAAATAAACTA+AGG | + | chr3_4:62553245-62553264 | None:intergenic | 25.0% |
| !!! | AAGATCTACTTTTTAGTCTT+TGG | + | chr3_4:62553353-62553372 | None:intergenic | 25.0% |
| !!! | GATCTTAATCTCTTTTGTTT+TGG | - | chr3_4:62553562-62553581 | Msa0512640:five_prime_UTR | 25.0% |
| !!! | TAATCTCTTTTGTTTTGGAA+TGG | - | chr3_4:62553567-62553586 | Msa0512640:five_prime_UTR | 25.0% |
| !!! | TGTTTTGAATATAGTGAATG+AGG | - | chr3_4:62553591-62553610 | Msa0512640:five_prime_UTR | 25.0% |
| AGAAGAAAACAAAACACCTT+CGG | - | chr3_4:62546817-62546836 | Msa0512640:three_prime_UTR | 30.0% | |
| TGATGAAAATGTGATGTGAA+TGG | + | chr3_4:62546880-62546899 | None:intergenic | 30.0% | |
| AAAATTCAAAAGGGGCAAAA+TGG | - | chr3_4:62546996-62547015 | Msa0512640:three_prime_UTR | 30.0% | |
| AAATTCAAAAGGGGCAAAAT+GGG | - | chr3_4:62546997-62547016 | Msa0512640:three_prime_UTR | 30.0% | |
| TATAGCATAAGTGCTTATTG+CGG | - | chr3_4:62547418-62547437 | Msa0512640:intron | 30.0% | |
| TCAAATGAGCCAATCTAAAA+AGG | - | chr3_4:62547767-62547786 | Msa0512640:CDS | 30.0% | |
| TCAAATGAGCCAATCTAAAA+AGG | - | chr3_4:62547767-62547786 | Msa0512640:CDS | 30.0% | |
| CTGTGTATATTAGCAAAAGT+TGG | - | chr3_4:62547946-62547965 | Msa0512640:intron | 30.0% | |
| !! | GAGTTTCATTTTTCGTTTTG+AGG | - | chr3_4:62548124-62548143 | Msa0512640:intron | 30.0% |
| TGGATCTTGATACAAACATA+TGG | - | chr3_4:62548259-62548278 | Msa0512640:CDS | 30.0% | |
| !!! | AGCTTGTTAATAGACCTTTT+TGG | - | chr3_4:62548288-62548307 | Msa0512640:intron | 30.0% |
| AATATGTTGGTATCCACTAT+AGG | - | chr3_4:62548375-62548394 | Msa0512640:intron | 30.0% | |
| ATATGTTGGTATCCACTATA+GGG | - | chr3_4:62548376-62548395 | Msa0512640:intron | 30.0% | |
| ACTTTGAATTAACCCTATAG+TGG | + | chr3_4:62548391-62548410 | None:intergenic | 30.0% | |
| ! | TTGCTTACTTTGGAAGATTT+AGG | - | chr3_4:62548504-62548523 | Msa0512640:intron | 30.0% |
| CTTCAAATTCAATCTCTGTT+TGG | + | chr3_4:62548620-62548639 | None:intergenic | 30.0% | |
| ! | TATTGTGATGGTGACTTAAT+AGG | - | chr3_4:62548712-62548731 | Msa0512640:intron | 30.0% |
| TTAATAGGTTCTCCTATTGA+TGG | - | chr3_4:62548727-62548746 | Msa0512640:intron | 30.0% | |
| GTAAGATAATAGTGCTATCA+CGG | - | chr3_4:62548790-62548809 | Msa0512640:CDS | 30.0% | |
| AATTGATGAAGAAAGGAGTT+GGG | + | chr3_4:62548958-62548977 | None:intergenic | 30.0% | |
| TAATTGATGAAGAAAGGAGT+TGG | + | chr3_4:62548959-62548978 | None:intergenic | 30.0% | |
| AACTGAAATAACACAACTTG+GGG | + | chr3_4:62549006-62549025 | None:intergenic | 30.0% | |
| GAACTGAAATAACACAACTT+GGG | + | chr3_4:62549007-62549026 | None:intergenic | 30.0% | |
| ! | TCTTAAGTCTATTTTCCGAA+TGG | - | chr3_4:62549384-62549403 | Msa0512640:intron | 30.0% |
| TTCCTATTTATAGCGTGATA+GGG | + | chr3_4:62549524-62549543 | None:intergenic | 30.0% | |
| AACATGTTAAATATGCACAG+TGG | - | chr3_4:62549542-62549561 | Msa0512640:intron | 30.0% | |
| CTTAATCCCTGTATCATTAA+TGG | - | chr3_4:62549632-62549651 | Msa0512640:intron | 30.0% | |
| AACAGTTATGGACAGATAAT+TGG | - | chr3_4:62549697-62549716 | Msa0512640:intron | 30.0% | |
| GCATATAATTCCAAAACTGT+AGG | - | chr3_4:62549805-62549824 | Msa0512640:intron | 30.0% | |
| ! | TTACATGGTTTGCATTTGAT+TGG | - | chr3_4:62549834-62549853 | Msa0512640:intron | 30.0% |
| ! | TACATGGTTTGCATTTGATT+GGG | - | chr3_4:62549835-62549854 | Msa0512640:intron | 30.0% |
| CCTTTATTATCCCCAAAAAA+AGG | + | chr3_4:62549893-62549912 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTTGGGGATAATAA+AGG | - | chr3_4:62549890-62549909 | Msa0512640:intron | 30.0% |
| AGTAATCTTGTCCTAAATGT+TGG | - | chr3_4:62549955-62549974 | Msa0512640:intron | 30.0% | |
| GACCTTATAAGTTAAACCTT+TGG | - | chr3_4:62550324-62550343 | Msa0512640:intron | 30.0% | |
| ! | TGCCAAAGGTTTAACTTATA+AGG | + | chr3_4:62550329-62550348 | None:intergenic | 30.0% |
| TCTATTATTAAACTACAGGC+TGG | - | chr3_4:62550365-62550384 | Msa0512640:intron | 30.0% | |
| ! | GACAGACAAATTTTACAAGA+GGG | + | chr3_4:62550604-62550623 | None:intergenic | 30.0% |
| TGAAGAGGGACTTATAAAAA+GGG | + | chr3_4:62550626-62550645 | None:intergenic | 30.0% | |
| TTGAAGAGGGACTTATAAAA+AGG | + | chr3_4:62550627-62550646 | None:intergenic | 30.0% | |
| !!! | TTTCATTAGGGGTATTTTTG+TGG | + | chr3_4:62550675-62550694 | None:intergenic | 30.0% |
| CAAAAATACCCCTAATGAAA+TGG | - | chr3_4:62550675-62550694 | Msa0512640:intron | 30.0% | |
| ATTTGGAAGGAAGAAAACAT+GGG | + | chr3_4:62551071-62551090 | None:intergenic | 30.0% | |
| !! | GTTTGGTTCAAAATTTTGGA+GGG | + | chr3_4:62551152-62551171 | None:intergenic | 30.0% |
| !! | TGTTTGGTTCAAAATTTTGG+AGG | + | chr3_4:62551153-62551172 | None:intergenic | 30.0% |
| TAAATCATAGGATTCAGCAA+GGG | + | chr3_4:62551264-62551283 | None:intergenic | 30.0% | |
| TTAAATCATAGGATTCAGCA+AGG | + | chr3_4:62551265-62551284 | None:intergenic | 30.0% | |
| GTTCATTATACAAAATGACG+GGG | + | chr3_4:62551301-62551320 | None:intergenic | 30.0% | |
| GGTTCATTATACAAAATGAC+GGG | + | chr3_4:62551302-62551321 | None:intergenic | 30.0% | |
| GGGTTCATTATACAAAATGA+CGG | + | chr3_4:62551303-62551322 | None:intergenic | 30.0% | |
| TTCAATATGTCAGGAATCTT+GGG | + | chr3_4:62551323-62551342 | None:intergenic | 30.0% | |
| ATTCAATATGTCAGGAATCT+TGG | + | chr3_4:62551324-62551343 | None:intergenic | 30.0% | |
| TTAATTCTGTTGCAGGTTTA+TGG | - | chr3_4:62551703-62551722 | Msa0512640:intron | 30.0% | |
| !! | ATGGTGTTTTAGATGTTCAA+AGG | - | chr3_4:62551722-62551741 | Msa0512640:intron | 30.0% |
| !! | TGGTGTTTTAGATGTTCAAA+GGG | - | chr3_4:62551723-62551742 | Msa0512640:intron | 30.0% |
| AATTTCCATATTTCAGTGCA+TGG | - | chr3_4:62551754-62551773 | Msa0512640:intron | 30.0% | |
| ATTTCCATATTTCAGTGCAT+GGG | - | chr3_4:62551755-62551774 | Msa0512640:intron | 30.0% | |
| TGGGACAGAATAATAAACAA+GGG | + | chr3_4:62551988-62552007 | None:intergenic | 30.0% | |
| TTGGGACAGAATAATAAACA+AGG | + | chr3_4:62551989-62552008 | None:intergenic | 30.0% | |
| !! | GATACCTAATTTGATAGTGA+TGG | - | chr3_4:62552193-62552212 | Msa0512640:intron | 30.0% |
| ! | GTTATCCATGATTTGTCATT+TGG | - | chr3_4:62552262-62552281 | Msa0512640:CDS | 30.0% |
| TATGAATTCCTGGATATTTG+GGG | + | chr3_4:62552288-62552307 | None:intergenic | 30.0% | |
| GTTATGAATTCCTGGATATT+TGG | + | chr3_4:62552290-62552309 | None:intergenic | 30.0% | |
| TGAAAACTGAACTGTTATTC+AGG | + | chr3_4:62552418-62552437 | None:intergenic | 30.0% | |
| ATCAAATTGACTAGTAATGG+GGG | + | chr3_4:62552530-62552549 | None:intergenic | 30.0% | |
| GATCAAATTGACTAGTAATG+GGG | + | chr3_4:62552531-62552550 | None:intergenic | 30.0% | |
| CGATCAAATTGACTAGTAAT+GGG | + | chr3_4:62552532-62552551 | None:intergenic | 30.0% | |
| CCATTACTAGTCAATTTGAT+CGG | - | chr3_4:62552530-62552549 | Msa0512640:intron | 30.0% | |
| AAAATTACCTGTTACAGCAA+AGG | + | chr3_4:62552764-62552783 | None:intergenic | 30.0% | |
| ! | CAGGTAATTTTTCCTTTAAC+TGG | - | chr3_4:62552773-62552792 | Msa0512640:intron | 30.0% |
| GTAGTAGATATTCCAGTTAA+AGG | + | chr3_4:62552788-62552807 | None:intergenic | 30.0% | |
| CTAATATGTGTTGTGAAAAC+TGG | + | chr3_4:62553045-62553064 | None:intergenic | 30.0% | |
| GAAACAAAATAAACTAAGGC+AGG | + | chr3_4:62553241-62553260 | None:intergenic | 30.0% | |
| !!! | TCAAGTCTTTGTGTTGGTTT+TGG | + | chr3_4:62546787-62546806 | None:intergenic | 35.0% |
| GAAGAAAACAAAACACCTTC+GGG | - | chr3_4:62546818-62546837 | Msa0512640:three_prime_UTR | 35.0% | |
| GAAAATGTGATGTGAATGGA+AGG | + | chr3_4:62546876-62546895 | None:intergenic | 35.0% | |
| TTGTTGCAGAAAACTCAATC+TGG | - | chr3_4:62547072-62547091 | Msa0512640:three_prime_UTR | 35.0% | |
| TTGATTGCAGTTTCGATCAT+TGG | - | chr3_4:62547219-62547238 | Msa0512640:intron | 35.0% | |
| TACAACTTACACTGTTCATC+AGG | - | chr3_4:62547290-62547309 | Msa0512640:intron | 35.0% | |
| TATAGCATAAGTGCTTATCG+TGG | - | chr3_4:62547546-62547565 | Msa0512640:intron | 35.0% | |
| AACCATCACAAGGTAAAGAA+GGG | + | chr3_4:62548070-62548089 | None:intergenic | 35.0% | |
| TAACCATCACAAGGTAAAGA+AGG | + | chr3_4:62548071-62548090 | None:intergenic | 35.0% | |
| ACATGAAGCAGATAAAATGC+TGG | + | chr3_4:62548097-62548116 | None:intergenic | 35.0% | |
| ATGTTTGCCAGACATATCAA+TGG | + | chr3_4:62548235-62548254 | None:intergenic | 35.0% | |
| ! | AGTCTTGTATCCTTCCATAT+CGG | - | chr3_4:62548408-62548427 | Msa0512640:intron | 35.0% |
| !!! | TGTGTTTTTTCCGATATGGA+AGG | + | chr3_4:62548421-62548440 | None:intergenic | 35.0% |
| !!! | GTTCTGTGTTTTTTCCGATA+TGG | + | chr3_4:62548425-62548444 | None:intergenic | 35.0% |
| ACAGATCACTATTAAGCTGA+GGG | + | chr3_4:62548563-62548582 | None:intergenic | 35.0% | |
| ! | AATTTGAAGTTTCCTATGCG+AGG | - | chr3_4:62548631-62548650 | Msa0512640:intron | 35.0% |
| CAGACTGTTCAATATTGTGA+TGG | - | chr3_4:62548700-62548719 | Msa0512640:intron | 35.0% | |
| GAAGTGAAACATCCATCAAT+AGG | + | chr3_4:62548742-62548761 | None:intergenic | 35.0% | |
| ! | ATTGATGGATGTTTCACTTC+TGG | - | chr3_4:62548742-62548761 | Msa0512640:CDS | 35.0% |
| ! | TTGATGGATGTTTCACTTCT+GGG | - | chr3_4:62548743-62548762 | Msa0512640:CDS | 35.0% |
| TCTTACACTAGTGACTGATA+TGG | + | chr3_4:62548776-62548795 | None:intergenic | 35.0% | |
| AAGGGATTGTAGCAATTTCA+TGG | - | chr3_4:62548877-62548896 | Msa0512640:intron | 35.0% | |
| AGGGATTGTAGCAATTTCAT+GGG | - | chr3_4:62548878-62548897 | Msa0512640:intron | 35.0% | |
| ! | ATAGGTTTTTCGTCCATTGT+TGG | + | chr3_4:62548931-62548950 | None:intergenic | 35.0% |
| AGAAAGGAGTTGGGAAAAAT+AGG | + | chr3_4:62548949-62548968 | None:intergenic | 35.0% | |
| GGAACTGAAATAACACAACT+TGG | + | chr3_4:62549008-62549027 | None:intergenic | 35.0% | |
| CAGTTATTTAGTATGCAGTC+AGG | + | chr3_4:62549451-62549470 | None:intergenic | 35.0% | |
| AGAAGTAGTTGAGAGAAGTT+GGG | + | chr3_4:62549474-62549493 | None:intergenic | 35.0% | |
| AAGAAGTAGTTGAGAGAAGT+TGG | + | chr3_4:62549475-62549494 | None:intergenic | 35.0% | |
| TACCCTATCACGCTATAAAT+AGG | - | chr3_4:62549519-62549538 | Msa0512640:intron | 35.0% | |
| GTTCCTATTTATAGCGTGAT+AGG | + | chr3_4:62549525-62549544 | None:intergenic | 35.0% | |
| !! | GGTTATTTTCATTTGACGAC+TGG | - | chr3_4:62549856-62549875 | Msa0512640:intron | 35.0% |
| AGATCTTCAGTCCAACATTT+AGG | + | chr3_4:62549969-62549988 | None:intergenic | 35.0% | |
| TATATCCGACATGATCATAG+AGG | + | chr3_4:62550159-62550178 | None:intergenic | 35.0% | |
| GGATATAGTATGCGCTTTAT+TGG | - | chr3_4:62550172-62550191 | Msa0512640:intron | 35.0% | |
| GAGTGAATAGTGCATATACT+TGG | + | chr3_4:62550239-62550258 | None:intergenic | 35.0% | |
| TATTCACTCTTAATCCCCAT+CGG | - | chr3_4:62550250-62550269 | Msa0512640:intron | 35.0% | |
| ! | GTTTTTGTCAAATGTGCCAA+AGG | + | chr3_4:62550343-62550362 | None:intergenic | 35.0% |
| TGCAGGTGATAAATGTTGAA+TGG | + | chr3_4:62550458-62550477 | None:intergenic | 35.0% | |
| AACATTTATCACCTGCAACA+TGG | - | chr3_4:62550461-62550480 | Msa0512640:intron | 35.0% | |
| ! | GGACAGACAAATTTTACAAG+AGG | + | chr3_4:62550605-62550624 | None:intergenic | 35.0% |
| AGGGATCTTATATATAGGGA+CGG | - | chr3_4:62550724-62550743 | Msa0512640:intron | 35.0% | |
| ATATCGTGAAGCGACAATAA+TGG | - | chr3_4:62550823-62550842 | Msa0512640:CDS | 35.0% | |
| !! | GGTTTAAGTTGAAGAGTTCT+CGG | - | chr3_4:62550978-62550997 | Msa0512640:intron | 35.0% |
| TTTGGAAGGAAGAAAACATG+GGG | + | chr3_4:62551070-62551089 | None:intergenic | 35.0% | |
| GATTTGGAAGGAAGAAAACA+TGG | + | chr3_4:62551072-62551091 | None:intergenic | 35.0% | |
| AAAGTTGAGAGGATGTATCT+TGG | - | chr3_4:62551115-62551134 | Msa0512640:intron | 35.0% | |
| !! | CAAAATTTTGGAGGGAATTG+AGG | + | chr3_4:62551144-62551163 | None:intergenic | 35.0% |
| ! | TTTCTGGCATTCAATATGTC+AGG | + | chr3_4:62551332-62551351 | None:intergenic | 35.0% |
| ! | ATTTTCAGTGGCTTCATCAA+AGG | + | chr3_4:62551557-62551576 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTATTTTCAG+TGG | + | chr3_4:62551569-62551588 | None:intergenic | 35.0% |
| CACTGAAAATACCATCAAGA+AGG | - | chr3_4:62551567-62551586 | Msa0512640:intron | 35.0% | |
| AAATACCATCAAGAAGGTGA+AGG | - | chr3_4:62551573-62551592 | Msa0512640:intron | 35.0% | |
| !! | GTGAAGGAGGCATTAAAAAA+TGG | - | chr3_4:62551589-62551608 | Msa0512640:intron | 35.0% |
| ! | GAGGCATTAAAAAATGGAGA+AGG | - | chr3_4:62551595-62551614 | Msa0512640:intron | 35.0% |
| TAAAAAATGGAGAAGGATGC+AGG | - | chr3_4:62551602-62551621 | Msa0512640:intron | 35.0% | |
| AAAAAATGGAGAAGGATGCA+GGG | - | chr3_4:62551603-62551622 | Msa0512640:intron | 35.0% | |
| GTAACTGAGAACTGATTAGT+CGG | + | chr3_4:62552496-62552515 | None:intergenic | 35.0% | |
| CCGATCAAATTGACTAGTAA+TGG | + | chr3_4:62552533-62552552 | None:intergenic | 35.0% | |
| ACTTCAAACTAAATCCAACC+TGG | + | chr3_4:62552562-62552581 | None:intergenic | 35.0% | |
| !! | GGTTGGATTTAGTTTGAAGT+TGG | - | chr3_4:62552562-62552581 | Msa0512640:intron | 35.0% |
| GCTACATATGCAAAATCAAC+AGG | + | chr3_4:62552637-62552656 | None:intergenic | 35.0% | |
| !! | TCCTTGATAGTGACAGTAAT+AGG | + | chr3_4:62552685-62552704 | None:intergenic | 35.0% |
| TGGTTCAACTGTATTTGTAC+CGG | - | chr3_4:62552914-62552933 | Msa0512640:intron | 35.0% | |
| TCAATCTCGCAAGTCATAAT+CGG | + | chr3_4:62552944-62552963 | None:intergenic | 35.0% | |
| !! | TTGCGAGATTGACTGATTTT+CGG | - | chr3_4:62552952-62552971 | Msa0512640:intron | 35.0% |
| !!! | ATTGACTGATTTTCGGGTTA+AGG | - | chr3_4:62552959-62552978 | Msa0512640:intron | 35.0% |
| TGCAAGAATTCAAGCTAACT+AGG | - | chr3_4:62553146-62553165 | Msa0512640:intron | 35.0% | |
| GCAAGAATTCAAGCTAACTA+GGG | - | chr3_4:62553147-62553166 | Msa0512640:intron | 35.0% | |
| ACCAACACATTTACATCAAC+AGG | - | chr3_4:62553281-62553300 | Msa0512640:CDS | 35.0% | |
| AGTAAATTCCAAATAGTGCC+TGG | + | chr3_4:62553422-62553441 | None:intergenic | 35.0% | |
| TGTTGATGCTTGATTCAACT+GGG | + | chr3_4:62553474-62553493 | None:intergenic | 35.0% | |
| ATGTTGATGCTTGATTCAAC+TGG | + | chr3_4:62553475-62553494 | None:intergenic | 35.0% | |
| AAAACTCAATCTGGTGCTCT+TGG | - | chr3_4:62547081-62547100 | Msa0512640:three_prime_UTR | 40.0% | |
| TTCCCTTCTTTACCTTGTGA+TGG | - | chr3_4:62548065-62548084 | Msa0512640:intron | 40.0% | |
| ! | CTTTTTCTGCGATTCTCTGT+TGG | - | chr3_4:62548191-62548210 | Msa0512640:CDS | 40.0% |
| !!! | TCTGTTGGCAGTTTTAAGTG+TGG | - | chr3_4:62548206-62548225 | Msa0512640:CDS | 40.0% |
| TGATATGTCTGGCAAACATG+AGG | - | chr3_4:62548236-62548255 | Msa0512640:CDS | 40.0% | |
| TCACAGCTTATGAGAGAGAA+GGG | + | chr3_4:62548447-62548466 | None:intergenic | 40.0% | |
| TTCACAGCTTATGAGAGAGA+AGG | + | chr3_4:62548448-62548467 | None:intergenic | 40.0% | |
| CACAGATCACTATTAAGCTG+AGG | + | chr3_4:62548564-62548583 | None:intergenic | 40.0% | |
| AGCAGCTAGTATACCAACAA+TGG | - | chr3_4:62548915-62548934 | Msa0512640:CDS | 40.0% | |
| ATGCATTGTTAGCACTCTGA+AGG | + | chr3_4:62549350-62549369 | None:intergenic | 40.0% | |
| CAGCTTCGTTTGAACAGTTA+TGG | - | chr3_4:62549685-62549704 | Msa0512640:intron | 40.0% | |
| GATCATAACACACACAAGCA+TGG | - | chr3_4:62549763-62549782 | Msa0512640:intron | 40.0% | |
| GGACTGAAGATCTCAATGAA+AGG | - | chr3_4:62549976-62549995 | Msa0512640:intron | 40.0% | |
| ! | TCTGCCTTAGCTTAAGCTTT+TGG | - | chr3_4:62550105-62550124 | Msa0512640:intron | 40.0% |
| ! | CTGCCTTAGCTTAAGCTTTT+GGG | - | chr3_4:62550106-62550125 | Msa0512640:intron | 40.0% |
| TCTCCCAAAAGCTTAAGCTA+AGG | + | chr3_4:62550112-62550131 | None:intergenic | 40.0% | |
| !!! | GCTTTTGGGAGAGTATTTCT+TGG | - | chr3_4:62550120-62550139 | Msa0512640:intron | 40.0% |
| ATTCACTCTTAATCCCCATC+GGG | - | chr3_4:62550251-62550270 | Msa0512640:intron | 40.0% | |
| TTATCACCTGCAACATGGAA+AGG | - | chr3_4:62550466-62550485 | Msa0512640:intron | 40.0% | |
| !! | AGGGAAACCTTTGATTTGCA+AGG | - | chr3_4:62550494-62550513 | Msa0512640:intron | 40.0% |
| !! | GGGAAACCTTTGATTTGCAA+GGG | - | chr3_4:62550495-62550514 | Msa0512640:intron | 40.0% |
| !! | GGAAACCTTTGATTTGCAAG+GGG | - | chr3_4:62550496-62550515 | Msa0512640:intron | 40.0% |
| TTCTTCCCCTTGCAAATCAA+AGG | + | chr3_4:62550504-62550523 | None:intergenic | 40.0% | |
| TTACACATAAGGACACAGGT+AGG | + | chr3_4:62550579-62550598 | None:intergenic | 40.0% | |
| ACAAGAGGGTCTTACACATA+AGG | + | chr3_4:62550590-62550609 | None:intergenic | 40.0% | |
| TGCATCTTGTAGCTTGAAGA+GGG | + | chr3_4:62550640-62550659 | None:intergenic | 40.0% | |
| ATGCATCTTGTAGCTTGAAG+AGG | + | chr3_4:62550641-62550660 | None:intergenic | 40.0% | |
| GATCTTATATATAGGGACGG+AGG | - | chr3_4:62550727-62550746 | Msa0512640:intron | 40.0% | |
| ATGGGTGACAATAGATGTGA+TGG | - | chr3_4:62550875-62550894 | Msa0512640:intron | 40.0% | |
| ! | GTGACAATAGATGTGATGGA+GGG | - | chr3_4:62550879-62550898 | Msa0512640:intron | 40.0% |
| ! | TGGTGATGACATAAAGGTAG+AGG | - | chr3_4:62551011-62551030 | Msa0512640:intron | 40.0% |
| TTAGATGTTCAAAGGGTTGC+TGG | - | chr3_4:62551730-62551749 | Msa0512640:intron | 40.0% | |
| TTAGCCCATGCACTGAAATA+TGG | + | chr3_4:62551762-62551781 | None:intergenic | 40.0% | |
| TTCCTAGAACTTACAGGTTC+AGG | - | chr3_4:62551908-62551927 | Msa0512640:intron | 40.0% | |
| TACCTGAACCTGTAAGTTCT+AGG | + | chr3_4:62551913-62551932 | None:intergenic | 40.0% | |
| ! | TTTTCTCCAGATCTTCGATG+CGG | - | chr3_4:62552216-62552235 | Msa0512640:intron | 40.0% |
| !! | TCAAGTGGGTTATGAATTCC+TGG | + | chr3_4:62552298-62552317 | None:intergenic | 40.0% |
| TCCTTGATGTCTCATCAAGT+GGG | + | chr3_4:62552312-62552331 | None:intergenic | 40.0% | |
| ATCCTTGATGTCTCATCAAG+TGG | + | chr3_4:62552313-62552332 | None:intergenic | 40.0% | |
| CTAGTCAATTTGATCGGACA+TGG | - | chr3_4:62552536-62552555 | Msa0512640:intron | 40.0% | |
| GCCTATTACTGTCACTATCA+AGG | - | chr3_4:62552681-62552700 | Msa0512640:intron | 40.0% | |
| !! | TGCGAGATTGACTGATTTTC+GGG | - | chr3_4:62552953-62552972 | Msa0512640:intron | 40.0% |
| GCCTGTTGATGTAAATGTGT+TGG | + | chr3_4:62553285-62553304 | None:intergenic | 40.0% | |
| ATTTACATCAACAGGCATGC+TGG | - | chr3_4:62553289-62553308 | Msa0512640:intron | 40.0% | |
| AAATAGTGCCTGGAATCTCT+TGG | + | chr3_4:62553412-62553431 | None:intergenic | 40.0% | |
| AAGAGATTCCAGGCACTATT+TGG | - | chr3_4:62553411-62553430 | Msa0512640:intron | 40.0% | |
| AAACAAAACACCTTCGGGAG+CGG | - | chr3_4:62546823-62546842 | Msa0512640:three_prime_UTR | 45.0% | |
| AACAAATGATCCTCTGTGCG+AGG | + | chr3_4:62547057-62547076 | None:intergenic | 45.0% | |
| !! | TACGTTGTTTCTGCACGAGT+TGG | - | chr3_4:62547257-62547276 | Msa0512640:intron | 45.0% |
| !! | ACGTTGTTTCTGCACGAGTT+GGG | - | chr3_4:62547258-62547277 | Msa0512640:intron | 45.0% |
| ATGTCTGTAGACTTGAAGCG+TGG | - | chr3_4:62548011-62548030 | Msa0512640:CDS | 45.0% | |
| GTGGATGCCATTGATATGTC+TGG | - | chr3_4:62548225-62548244 | Msa0512640:CDS | 45.0% | |
| TATGTCTGGCAAACATGAGG+TGG | - | chr3_4:62548239-62548258 | Msa0512640:CDS | 45.0% | |
| TTTCCTATGCGAGGTTCGTT+GGG | - | chr3_4:62548640-62548659 | Msa0512640:intron | 45.0% | |
| ATGTCGCTATGATAGGAACC+CGG | - | chr3_4:62549243-62549262 | Msa0512640:intron | 45.0% | |
| !! | CATTTGCTCTGGGATTACAG+GGG | + | chr3_4:62549325-62549344 | None:intergenic | 45.0% |
| !! | GCATTTGCTCTGGGATTACA+GGG | + | chr3_4:62549326-62549345 | None:intergenic | 45.0% |
| !! | AGCATTTGCTCTGGGATTAC+AGG | + | chr3_4:62549327-62549346 | None:intergenic | 45.0% |
| !! | TCTGAAGGAGCATTTGCTCT+GGG | + | chr3_4:62549335-62549354 | None:intergenic | 45.0% |
| TGATAGGGTAACTGCTGATG+CGG | + | chr3_4:62549509-62549528 | None:intergenic | 45.0% | |
| AAACGGGAATGAGTTGTGGT+AGG | + | chr3_4:62549924-62549943 | None:intergenic | 45.0% | |
| ACACAAACGGGAATGAGTTG+TGG | + | chr3_4:62549928-62549947 | None:intergenic | 45.0% | |
| !! | TGGGAGAGTATTTCTTGGCA+CGG | - | chr3_4:62550125-62550144 | Msa0512640:intron | 45.0% |
| CAGAGCCTCTATGATCATGT+CGG | - | chr3_4:62550151-62550170 | Msa0512640:intron | 45.0% | |
| TCTTACATAAGAGCCCGATG+GGG | + | chr3_4:62550267-62550286 | None:intergenic | 45.0% | |
| CTCTTACATAAGAGCCCGAT+GGG | + | chr3_4:62550268-62550287 | None:intergenic | 45.0% | |
| CATCGGGCTCTTATGTAAGA+GGG | - | chr3_4:62550267-62550286 | Msa0512640:intron | 45.0% | |
| TATCCTCCTTTCCATGTTGC+AGG | + | chr3_4:62550475-62550494 | None:intergenic | 45.0% | |
| TGCAACATGGAAAGGAGGAT+AGG | - | chr3_4:62550474-62550493 | Msa0512640:intron | 45.0% | |
| GCAACATGGAAAGGAGGATA+GGG | - | chr3_4:62550475-62550494 | Msa0512640:intron | 45.0% | |
| GGTCTTACACATAAGGACAC+AGG | + | chr3_4:62550583-62550602 | None:intergenic | 45.0% | |
| GTGAAGCGACAATAATGGTG+TGG | - | chr3_4:62550828-62550847 | Msa0512640:intron | 45.0% | |
| GACAATAATGGTGTGGAGCA+TGG | - | chr3_4:62550835-62550854 | Msa0512640:intron | 45.0% | |
| GGTGACAATAGATGTGATGG+AGG | - | chr3_4:62550878-62550897 | Msa0512640:intron | 45.0% | |
| AACCTCAAACCATCACTGTC+TGG | + | chr3_4:62550911-62550930 | None:intergenic | 45.0% | |
| ! | AGTGATGGTTTGAGGTTGTC+TGG | - | chr3_4:62550914-62550933 | Msa0512640:intron | 45.0% |
| ! | GGAGAGTGGTGATGACATAA+AGG | - | chr3_4:62551005-62551024 | Msa0512640:intron | 45.0% |
| AACATTGGGAGGGATTTGGA+AGG | + | chr3_4:62551084-62551103 | None:intergenic | 45.0% | |
| TTCCAAATCCCTCCCAATGT+TGG | - | chr3_4:62551083-62551102 | Msa0512640:intron | 45.0% | |
| AAATCCCTCCCAATGTTGGA+GGG | - | chr3_4:62551087-62551106 | Msa0512640:intron | 45.0% | |
| ! | TTTAGCTCCCCTCCAACATT+GGG | + | chr3_4:62551098-62551117 | None:intergenic | 45.0% |
| GGGACAATGAAGAGAAGATG+AGG | + | chr3_4:62551195-62551214 | None:intergenic | 45.0% | |
| AGTTTACGCAGTGTTTGGCA+GGG | + | chr3_4:62551217-62551236 | None:intergenic | 45.0% | |
| AAGTTTACGCAGTGTTTGGC+AGG | + | chr3_4:62551218-62551237 | None:intergenic | 45.0% | |
| GCAGAAGTTTACGCAGTGTT+TGG | + | chr3_4:62551222-62551241 | None:intergenic | 45.0% | |
| ATCATAGGATTCAGCAAGGG+TGG | + | chr3_4:62551261-62551280 | None:intergenic | 45.0% | |
| TACCATCAAGAAGGTGAAGG+AGG | - | chr3_4:62551576-62551595 | Msa0512640:intron | 45.0% | |
| TTTCTCCAGATCTTCGATGC+GGG | - | chr3_4:62552217-62552236 | Msa0512640:intron | 45.0% | |
| TGGGGCCAAATGACAAATCA+TGG | + | chr3_4:62552270-62552289 | None:intergenic | 45.0% | |
| TCATTTGGCCCCAAATATCC+AGG | - | chr3_4:62552277-62552296 | Msa0512640:CDS | 45.0% | |
| ACCCACTTGATGAGACATCA+AGG | - | chr3_4:62552308-62552327 | Msa0512640:intron | 45.0% | |
| GCAAGTCATAATCGGTGAAC+CGG | + | chr3_4:62552936-62552955 | None:intergenic | 45.0% | |
| CAACGAGTCTGTACATCCAA+CGG | + | chr3_4:62553316-62553335 | None:intergenic | 45.0% | |
| ATGTCACTGCAGACACTACA+AGG | + | chr3_4:62553530-62553549 | None:intergenic | 45.0% | |
| TGCGTAGAGTTGCACAACTA+CGG | + | chr3_4:62553633-62553652 | None:intergenic | 45.0% | |
| !!! | GTTTTTTTTTTATTTAATTT+TGG | - | chr3_4:62547357-62547376 | Msa0512640:intron | 5.0% |
| !!! | TTTTTTTTTGTATTTAATTT+TGG | - | chr3_4:62547484-62547503 | Msa0512640:intron | 5.0% |
| !! | AGTATTTATTATTATTATAA+GGG | + | chr3_4:62550555-62550574 | None:intergenic | 5.0% |
| !! | TAGTATTTATTATTATTATA+AGG | + | chr3_4:62550556-62550575 | None:intergenic | 5.0% |
| AACAAAACACCTTCGGGAGC+GGG | - | chr3_4:62546824-62546843 | Msa0512640:three_prime_UTR | 50.0% | |
| TGAATGGAAGGAGCTACCAC+CGG | + | chr3_4:62546864-62546883 | None:intergenic | 50.0% | |
| ! | TGCTGGTGCTAACCATCACA+AGG | + | chr3_4:62548080-62548099 | None:intergenic | 50.0% |
| GTTTCCTATGCGAGGTTCGT+TGG | - | chr3_4:62548639-62548658 | Msa0512640:intron | 50.0% | |
| CTGCTCCATGTCGCTATGAT+AGG | - | chr3_4:62549236-62549255 | Msa0512640:intron | 50.0% | |
| GGGTTCCTATCATAGCGACA+TGG | + | chr3_4:62549244-62549263 | None:intergenic | 50.0% | |
| !! | CTCTGAAGGAGCATTTGCTC+TGG | + | chr3_4:62549336-62549355 | None:intergenic | 50.0% |
| CCTCTTACATAAGAGCCCGA+TGG | + | chr3_4:62550269-62550288 | None:intergenic | 50.0% | |
| CCATCGGGCTCTTATGTAAG+AGG | - | chr3_4:62550266-62550285 | Msa0512640:intron | 50.0% | |
| TCACCTGCAACATGGAAAGG+AGG | - | chr3_4:62550469-62550488 | Msa0512640:intron | 50.0% | |
| ! | GTGGAGCATGGTGTCAATGA+CGG | - | chr3_4:62550847-62550866 | Msa0512640:intron | 50.0% |
| ! | AGCATGGTGTCAATGACGGA+GGG | - | chr3_4:62550851-62550870 | Msa0512640:intron | 50.0% |
| TCAAACCATCACTGTCTGGC+TGG | + | chr3_4:62550907-62550926 | None:intergenic | 50.0% | |
| AGCCAGACAGTGATGGTTTG+AGG | - | chr3_4:62550906-62550925 | Msa0512640:intron | 50.0% | |
| AGTTGAAGAGTTCTCGGCAG+TGG | - | chr3_4:62550984-62551003 | Msa0512640:intron | 50.0% | |
| AATCCACTGCCACCAACGTT+GGG | + | chr3_4:62551040-62551059 | None:intergenic | 50.0% | |
| AAATCCACTGCCACCAACGT+TGG | + | chr3_4:62551041-62551060 | None:intergenic | 50.0% | |
| CTCCAACATTGGGAGGGATT+TGG | + | chr3_4:62551088-62551107 | None:intergenic | 50.0% | |
| CAAATCCCTCCCAATGTTGG+AGG | - | chr3_4:62551086-62551105 | Msa0512640:intron | 50.0% | |
| AATCCCTCCCAATGTTGGAG+GGG | - | chr3_4:62551088-62551107 | Msa0512640:intron | 50.0% | |
| ! | CTTTAGCTCCCCTCCAACAT+TGG | + | chr3_4:62551099-62551118 | None:intergenic | 50.0% |
| TTTACGCAGTGTTTGGCAGG+GGG | + | chr3_4:62551215-62551234 | None:intergenic | 50.0% | |
| GTTTACGCAGTGTTTGGCAG+GGG | + | chr3_4:62551216-62551235 | None:intergenic | 50.0% | |
| TGCCTCCTTCACCTTCTTGA+TGG | + | chr3_4:62551581-62551600 | None:intergenic | 50.0% | |
| TCTTTCCCGCATCGAAGATC+TGG | + | chr3_4:62552225-62552244 | None:intergenic | 50.0% | |
| AGGATTCTGCATGATGCGAG+TGG | - | chr3_4:62552328-62552347 | Msa0512640:intron | 50.0% | |
| CAATTTGATCGGACATGGCC+AGG | - | chr3_4:62552541-62552560 | Msa0512640:intron | 50.0% | |
| AGCAAAGGTTCCACCTAGCA+CGG | + | chr3_4:62552749-62552768 | None:intergenic | 50.0% | |
| ! | GGTGGAACCTTTGCTGTAAC+AGG | - | chr3_4:62552754-62552773 | Msa0512640:intron | 50.0% |
| CGAATCGAGAACGACGAATC+AGG | + | chr3_4:62552995-62553014 | None:intergenic | 50.0% | |
| ATTCGTCGACAAGTCGAACG+AGG | - | chr3_4:62553010-62553029 | Msa0512640:intron | 50.0% | |
| CTGGAATCTCTTGGAGATGC+AGG | + | chr3_4:62553403-62553422 | None:intergenic | 50.0% | |
| CTGCATCTCCAAGAGATTCC+AGG | - | chr3_4:62553401-62553420 | Msa0512640:intron | 50.0% | |
| GCGTAGAGTTGCACAACTAC+GGG | + | chr3_4:62553632-62553651 | None:intergenic | 50.0% | |
| GCGGGTGGTTGAAGAAGAAC+CGG | - | chr3_4:62546842-62546861 | Msa0512640:three_prime_UTR | 55.0% | |
| GGTGGTTGAAGAAGAACCGG+TGG | - | chr3_4:62546845-62546864 | Msa0512640:three_prime_UTR | 55.0% | |
| CGATGCATTTCCTCGCACAG+AGG | - | chr3_4:62547044-62547063 | Msa0512640:three_prime_UTR | 55.0% | |
| CATCCCAACGAACCTCGCAT+AGG | + | chr3_4:62548646-62548665 | None:intergenic | 55.0% | |
| TGGTTGAGGATGCCAGACCA+TGG | - | chr3_4:62550789-62550808 | Msa0512640:CDS | 55.0% | |
| TTGAGGATGCCAGACCATGG+TGG | - | chr3_4:62550792-62550811 | Msa0512640:CDS | 55.0% | |
| CGATATCCTCCATGCCACCA+TGG | + | chr3_4:62550809-62550828 | None:intergenic | 55.0% | |
| ! | GAGCATGGTGTCAATGACGG+AGG | - | chr3_4:62550850-62550869 | Msa0512640:intron | 55.0% |
| ! | GTGTCAATGACGGAGGGCAT+GGG | - | chr3_4:62550857-62550876 | Msa0512640:intron | 55.0% |
| GTTGTCTGGATGCCTAGCAG+AGG | - | chr3_4:62550928-62550947 | Msa0512640:intron | 55.0% | |
| AGGTAGAGGCTACCCAACGT+TGG | - | chr3_4:62551025-62551044 | Msa0512640:intron | 55.0% | |
| TAGAGGCTACCCAACGTTGG+TGG | - | chr3_4:62551028-62551047 | Msa0512640:intron | 55.0% | |
| GGAGGGGAGCTAAAGTTGAG+AGG | - | chr3_4:62551104-62551123 | Msa0512640:intron | 55.0% | |
| TTGATCGGACATGGCCAGGT+TGG | - | chr3_4:62552545-62552564 | Msa0512640:intron | 55.0% | |
| CAAGTCGAACGAGGCGGTAT+AGG | - | chr3_4:62553019-62553038 | Msa0512640:intron | 55.0% | |
| AAAACACCTTCGGGAGCGGG+TGG | - | chr3_4:62546827-62546846 | Msa0512640:three_prime_UTR | 60.0% | |
| CCTCAACCACCGCCACTACA+TGG | + | chr3_4:62550778-62550797 | None:intergenic | 60.0% | |
| CCATGTAGTGGCGGTGGTTG+AGG | - | chr3_4:62550775-62550794 | Msa0512640:CDS | 60.0% | |
| GATGCCAGACCATGGTGGCA+TGG | - | chr3_4:62550797-62550816 | Msa0512640:CDS | 60.0% | |
| TCCTCCATGCCACCATGGTC+TGG | + | chr3_4:62550804-62550823 | None:intergenic | 60.0% | |
| ! | GGTGTCAATGACGGAGGGCA+TGG | - | chr3_4:62550856-62550875 | Msa0512640:intron | 60.0% |
| TGGATGCCTAGCAGAGGCAG+TGG | - | chr3_4:62550934-62550953 | Msa0512640:intron | 60.0% | |
| GGATGCCTAGCAGAGGCAGT+GGG | - | chr3_4:62550935-62550954 | Msa0512640:intron | 60.0% | |
| TGACACCCACTGCCTCTGCT+AGG | + | chr3_4:62550943-62550962 | None:intergenic | 60.0% | |
| TAGCAGAGGCAGTGGGTGTC+AGG | - | chr3_4:62550942-62550961 | Msa0512640:intron | 60.0% | |
| GAGTTCTCGGCAGTGGAGAG+TGG | - | chr3_4:62550991-62551010 | Msa0512640:intron | 60.0% | |
| !! | CTACCCAACGTTGGTGGCAG+TGG | - | chr3_4:62551034-62551053 | Msa0512640:intron | 60.0% |
| GCTCCCCTCCAACATTGGGA+GGG | + | chr3_4:62551094-62551113 | None:intergenic | 60.0% | |
| AGCTCCCCTCCAACATTGGG+AGG | + | chr3_4:62551095-62551114 | None:intergenic | 60.0% | |
| ACCTAGCACGGCACAAAGCC+GGG | + | chr3_4:62552737-62552756 | None:intergenic | 60.0% | |
| CACCTAGCACGGCACAAAGC+CGG | + | chr3_4:62552738-62552757 | None:intergenic | 60.0% | |
| CGTCGACAAGTCGAACGAGG+CGG | - | chr3_4:62553013-62553032 | Msa0512640:intron | 60.0% | |
| CAACAGGCATGCTGGACCGT+TGG | - | chr3_4:62553297-62553316 | Msa0512640:intron | 60.0% | |
| CTTCAACCACCCGCTCCCGA+AGG | + | chr3_4:62546836-62546855 | None:intergenic | 65.0% | |
| GCCAGACCATGGTGGCATGG+AGG | - | chr3_4:62550800-62550819 | Msa0512640:CDS | 65.0% | |
| GGGTGCCAGCCAGACAGTGA+TGG | - | chr3_4:62550899-62550918 | Msa0512640:intron | 65.0% | |
| AGGCAGTGGGTGTCAGGTGC+TGG | - | chr3_4:62550948-62550967 | Msa0512640:intron | 65.0% | |
| !! | TGGGTGTCAGGTGCTGGCAG+TGG | - | chr3_4:62550954-62550973 | Msa0512640:intron | 65.0% |
| !! | GTGTCAGGTGCTGGCAGTGG+TGG | - | chr3_4:62550957-62550976 | Msa0512640:intron | 65.0% |
| ! | ACCCGGCTTTGTGCCGTGCT+AGG | - | chr3_4:62552733-62552752 | Msa0512640:intron | 65.0% |
| ! | CGGCTTTGTGCCGTGCTAGG+TGG | - | chr3_4:62552736-62552755 | Msa0512640:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62546775 | 62553755 | 62546775 | ID=Msa0512640;Name=Msa0512640 |
| chr3_4 | mRNA | 62546775 | 62553755 | 62546775 | ID=Msa0512640-mRNA-1;Parent=Msa0512640;Name=Msa0512640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=240|1|1|1|1|1|11|388|353 |
| chr3_4 | exon | 62546775 | 62547227 | 62546775 | ID=Msa0512640-mRNA-1:exon:15507;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62547755 | 62547874 | 62547755 | ID=Msa0512640-mRNA-1:exon:15506;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62547968 | 62548079 | 62547968 | ID=Msa0512640-mRNA-1:exon:15505;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62548158 | 62548304 | 62548158 | ID=Msa0512640-mRNA-1:exon:15504;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62548729 | 62548812 | 62548729 | ID=Msa0512640-mRNA-1:exon:15503;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62548906 | 62549027 | 62548906 | ID=Msa0512640-mRNA-1:exon:15502;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62550746 | 62550842 | 62550746 | ID=Msa0512640-mRNA-1:exon:15501;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62552246 | 62552313 | 62552246 | ID=Msa0512640-mRNA-1:exon:15500;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62552444 | 62552519 | 62552444 | ID=Msa0512640-mRNA-1:exon:15499;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62553219 | 62553301 | 62553219 | ID=Msa0512640-mRNA-1:exon:15498;Parent=Msa0512640-mRNA-1 |
| chr3_4 | exon | 62553428 | 62553755 | 62553428 | ID=Msa0512640-mRNA-1:exon:15497;Parent=Msa0512640-mRNA-1 |
| chr3_4 | five_prime_UTR | 62553516 | 62553755 | 62553516 | ID=Msa0512640-mRNA-1:five_prime_utr;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62553428 | 62553515 | 62553428 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62553219 | 62553301 | 62553219 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62552444 | 62552519 | 62552444 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62552246 | 62552313 | 62552246 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62550746 | 62550842 | 62550746 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62548906 | 62549027 | 62548906 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62548729 | 62548812 | 62548729 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62548158 | 62548304 | 62548158 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62547968 | 62548079 | 62547968 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62547755 | 62547874 | 62547755 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | CDS | 62547163 | 62547227 | 62547163 | ID=Msa0512640-mRNA-1:cds;Parent=Msa0512640-mRNA-1 |
| chr3_4 | three_prime_UTR | 62546775 | 62547162 | 62546775 | ID=Msa0512640-mRNA-1:three_prime_utr;Parent=Msa0512640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
