AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100870 MtrunA17_Chr7g0217681 97.023 571 15 1 1 569 1 571 0.0 1111
Msa1100870 MtrunA17_Chr6g0453421 68.063 573 159 10 1 569 1 553 0.0 689
Msa1100870 MtrunA17_Chr2g0285771 32.240 549 304 16 21 524 22 547 1.76e-71 241
Msa1100870 MtrunA17_Chr2g0285771 26.437 348 198 8 47 364 311 630 3.86e-26 113
Msa1100870 MtrunA17_Chr3g0140741 34.827 491 231 12 27 459 15 474 2.50e-68 233
Msa1100870 MtrunA17_Chr4g0049801 34.354 457 246 12 32 459 4 435 1.48e-64 222
Msa1100870 MtrunA17_Chr4g0049801 29.167 360 187 12 13 329 242 576 6.93e-27 115
Msa1100870 MtrunA17_Chr8g0376551 31.175 587 305 20 23 553 26 569 1.01e-59 209
Msa1100870 MtrunA17_Chr8g0376551 26.852 324 178 10 47 339 313 608 1.87e-25 110
Msa1100870 MtrunA17_Chr4g0002241 31.481 432 239 12 42 464 9 392 5.04e-53 190
Msa1100870 MtrunA17_Chr3g0127051 29.252 441 267 11 49 459 63 488 4.89e-45 169
Msa1100870 MtrunA17_Chr3g0127051 25.485 361 220 10 3 346 293 621 1.71e-20 95.5
Msa1100870 MtrunA17_Chr3g0127051 35.263 190 98 6 288 455 53 239 4.02e-19 91.3
Msa1100870 MtrunA17_Chr2g0279641 29.091 495 270 15 25 459 27 500 4.92e-45 170
Msa1100870 MtrunA17_Chr5g0412061 29.505 444 285 10 39 471 29 455 4.93e-40 154
Msa1100870 MtrunA17_Chr5g0412061 25.157 318 209 7 50 351 276 580 5.68e-19 90.5
Msa1100870 MtrunA17_Chr7g0250921 50.888 169 48 5 358 526 12 145 1.24e-32 124
Msa1100870 MtrunA17_Chr7g0249721 32.979 188 109 4 48 231 99 273 1.28e-24 104
Msa1100870 MtrunA17_Chr7g0249721 30.928 194 121 4 299 483 103 292 1.60e-13 71.6
Msa1100870 MtrunA17_Chr1g0184511 32.569 218 132 5 10 225 124 328 5.32e-23 103
Msa1100870 MtrunA17_Chr1g0184511 30.508 177 116 2 291 461 160 335 3.93e-15 78.6
Msa1100870 MtrunA17_Chr7g0274301 33.708 178 101 4 48 225 114 274 1.17e-21 98.6
Msa1100870 MtrunA17_Chr7g0274301 25.281 178 132 1 285 461 104 281 1.53e-15 79.7
Msa1100870 MtrunA17_Chr2g0298721 33.520 179 107 2 48 226 69 235 9.35e-21 95.5
Msa1100870 MtrunA17_Chr2g0298721 30.729 192 122 2 285 470 59 245 1.28e-17 85.9
Msa1100870 MtrunA17_Chr4g0071791 34.694 196 115 3 30 225 26 208 2.37e-20 94.0
Msa1100870 MtrunA17_Chr4g0071791 31.217 189 119 2 288 470 36 219 4.56e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100870 AT5G15270.3 59.815 540 192 12 11 548 17 533 0.0 617
Msa1100870 AT5G15270.2 59.848 528 187 12 11 536 17 521 0.0 603
Msa1100870 AT5G15270.1 59.848 528 187 12 11 536 17 521 0.0 603
Msa1100870 AT1G14170.3 51.158 475 188 9 26 492 25 463 1.22e-140 416
Msa1100870 AT1G14170.1 51.422 457 182 7 44 492 14 438 1.65e-139 412
Msa1100870 AT1G14170.2 51.656 453 179 7 48 492 10 430 8.00e-139 410
Msa1100870 AT5G46190.1 35.217 460 246 11 49 471 44 488 7.30e-71 240
Msa1100870 AT5G46190.1 29.141 326 155 10 52 334 320 612 3.08e-26 114
Msa1100870 AT5G46190.4 35.217 460 246 11 49 471 44 488 7.30e-71 240
Msa1100870 AT5G46190.4 29.141 326 155 10 52 334 320 612 3.08e-26 114
Msa1100870 AT5G46190.3 35.217 460 246 11 49 471 44 488 7.30e-71 240
Msa1100870 AT5G46190.3 29.141 326 155 10 52 334 320 612 3.08e-26 114
Msa1100870 AT5G46190.2 35.269 465 247 12 46 471 39 488 4.18e-70 239
Msa1100870 AT5G46190.2 28.530 347 169 12 52 355 320 630 7.19e-24 106
Msa1100870 AT4G18375.3 30.619 565 301 21 23 537 7 530 4.83e-63 216
Msa1100870 AT4G18375.2 30.796 565 300 21 23 537 7 530 2.27e-62 216
Msa1100870 AT4G18375.2 27.640 322 166 10 47 346 310 586 2.28e-23 104
Msa1100870 AT1G51580.1 31.155 459 255 13 36 459 5 437 2.93e-55 197
Msa1100870 AT1G51580.1 28.283 198 121 5 30 227 258 434 4.50e-21 97.8
Msa1100870 AT5G53060.3 30.684 453 263 12 38 461 57 487 6.53e-52 187
Msa1100870 AT5G53060.1 30.684 453 263 12 38 461 57 487 5.74e-51 186
Msa1100870 AT2G03110.2 50.327 153 72 3 82 231 1 152 5.70e-39 140
Msa1100870 AT2G03110.1 50.327 153 72 3 82 231 1 152 5.70e-39 140
Msa1100870 AT2G03110.3 50.327 153 72 3 82 231 1 152 5.70e-39 140
Msa1100870 AT2G22600.1 27.897 466 286 13 26 462 2 446 1.09e-32 133
Msa1100870 AT4G18375.1 33.688 282 130 11 264 537 85 317 2.00e-29 120
Msa1100870 AT4G18375.1 27.794 349 170 13 47 373 97 385 2.02e-24 105
Msa1100870 AT5G64390.1 36.872 179 109 1 285 459 441 619 6.57e-27 116
Msa1100870 AT5G64390.1 31.304 230 140 4 1 228 404 617 1.44e-26 115
Msa1100870 AT5G64390.1 32.461 191 99 3 51 227 49 223 6.83e-23 103
Msa1100870 AT5G64390.1 33.152 184 79 6 297 450 48 217 4.00e-14 76.3
Msa1100870 AT5G64390.2 36.872 179 109 1 285 459 441 619 6.98e-27 116
Msa1100870 AT5G64390.2 31.304 230 140 4 1 228 404 617 1.27e-26 115
Msa1100870 AT5G64390.2 32.461 191 99 3 51 227 49 223 6.66e-23 103
Msa1100870 AT5G64390.2 33.152 184 79 6 297 450 48 217 3.59e-14 76.3
Msa1100870 AT5G64390.3 36.872 179 109 1 285 459 441 619 7.65e-27 116
Msa1100870 AT5G64390.3 31.304 230 140 4 1 228 404 617 1.58e-26 115
Msa1100870 AT5G64390.3 32.461 191 99 3 51 227 49 223 7.20e-23 103
Msa1100870 AT5G64390.3 33.152 184 79 6 297 450 48 217 3.85e-14 76.3
Msa1100870 AT3G04610.3 30.638 235 130 5 48 270 162 375 8.21e-24 105
Msa1100870 AT3G04610.3 27.528 178 125 1 288 461 155 332 1.38e-16 83.6
Msa1100870 AT3G04610.4 30.638 235 130 5 48 270 162 375 8.21e-24 105
Msa1100870 AT3G04610.4 27.528 178 125 1 288 461 155 332 1.38e-16 83.6
Msa1100870 AT3G04610.2 31.489 235 128 6 48 270 186 399 1.01e-23 105
Msa1100870 AT3G04610.2 27.528 178 125 1 288 461 179 356 1.80e-16 83.2
Msa1100870 AT3G04610.1 31.489 235 128 6 48 270 186 399 1.01e-23 105
Msa1100870 AT3G04610.1 27.528 178 125 1 288 461 179 356 1.80e-16 83.2
Msa1100870 AT4G26000.1 32.022 178 109 2 48 225 73 238 1.14e-21 99.0
Msa1100870 AT4G26000.1 32.222 180 114 3 288 460 66 244 4.70e-15 78.6
Msa1100870 AT5G09560.1 28.440 218 124 6 16 228 279 469 1.28e-16 83.6
Msa1100870 AT5G09560.1 29.778 225 131 6 312 509 320 544 6.81e-15 78.2

Find 318 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGAATTGGTTGCCTTAT+TGG 0.136643 7_3:-31288604 Msa1100870:CDS
ATGGAACTTGTTCAAGTATT+TGG 0.144742 7_3:-31285295 Msa1100870:three_prime_UTR
TCATGGTGGGGCTCCAATTA+TGG 0.148669 7_3:-31289139 Msa1100870:CDS
CTTTGAGATTCCTTGGATTA+TGG 0.168812 7_3:-31285314 Msa1100870:three_prime_UTR
ACAATTTCTGTTAGAATCTA+TGG 0.177846 7_3:-31286715 Msa1100870:three_prime_UTR
CTCTTTCACTAGCCGGTTAC+TGG 0.187699 7_3:-31288635 Msa1100870:CDS
GCATCTGACCACTATCTTAT+AGG 0.196381 7_3:-31286971 Msa1100870:three_prime_UTR
TTGCTTACTTCTGCAGTTCC+TGG 0.200050 7_3:-31289195 Msa1100870:CDS
ACAATTTCCGTTAGAATCTA+TGG 0.209065 7_3:-31286677 Msa1100870:three_prime_UTR
CAGTTTAGGCAGTAGGCTTC+AGG 0.210067 7_3:+31287473 None:intergenic
CCGTTAGAATCTATGGATAA+TGG 0.220717 7_3:-31286670 Msa1100870:three_prime_UTR
CTGTTAGAATCTATGGATAA+TGG 0.227331 7_3:-31286708 Msa1100870:three_prime_UTR
CAGAAATTGTTTGGGTTGTT+TGG 0.236028 7_3:+31286728 None:intergenic
GTTTGTGAATTGTGACTTTA+GGG 0.245122 7_3:+31291732 None:intergenic
ATCGGAGCCATTCCCATAAT+TGG 0.245633 7_3:+31289126 None:intergenic
CAAAATAGTGTGTGTTAAAA+TGG 0.247286 7_3:+31285667 None:intergenic
TTTGAATAATATAATGATAT+TGG 0.256594 7_3:-31287101 Msa1100870:three_prime_UTR
ATTAGTCTTGCTCTATGTTT+AGG 0.262619 7_3:-31285373 Msa1100870:three_prime_UTR
GGAGTGGTTTCGTCGGTGTT+AGG 0.267122 7_3:+31291600 None:intergenic
AATCAAATTAGGCAGGATTC+TGG 0.274868 7_3:-31288943 Msa1100870:CDS
TGTTTGTGAATTGTGACTTT+AGG 0.278298 7_3:+31291731 None:intergenic
CTTGGTCGAGGTGGTCCTTA+TGG 0.280832 7_3:-31287976 Msa1100870:CDS
GCTTAGGAAGTAAGGTAAAA+TGG 0.285966 7_3:+31287312 None:intergenic
CATATAAAATGTGTGCATAT+TGG 0.287484 7_3:-31285733 Msa1100870:three_prime_UTR
CGCAAAATCGGAAGCATCAT+TGG 0.292279 7_3:-31291519 Msa1100870:CDS
GTTATTTATCATTGATCAAT+AGG 0.292431 7_3:-31285587 Msa1100870:three_prime_UTR
TTGCTCTATGTTTAGGTTGT+TGG 0.302791 7_3:-31285366 Msa1100870:three_prime_UTR
GCTAACATTGGAGGTGTTAT+AGG 0.305964 7_3:-31288985 Msa1100870:CDS
TCAGGTGGATGGAGGGGATT+TGG 0.309548 7_3:-31290459 Msa1100870:intron
TTGATCCTCCTTTACCAATA+AGG 0.310702 7_3:+31288590 None:intergenic
TGTTCAAGTATTTGGAGATA+TGG 0.315324 7_3:-31285287 Msa1100870:three_prime_UTR
GAATGCAGTTGGATTTCTTC+AGG 0.316192 7_3:-31285197 Msa1100870:three_prime_UTR
AGATTCTAACAGAAATTGTT+TGG 0.317530 7_3:+31286719 None:intergenic
CGTTAGAATCTATGGATAAT+GGG 0.317951 7_3:-31286669 Msa1100870:three_prime_UTR
TTTGCATCTGGCGACGGTTA+TGG 0.318019 7_3:-31288129 Msa1100870:CDS
CAACCTTGATGCCTCTATCT+AGG 0.320441 7_3:-31287372 Msa1100870:three_prime_UTR
GAGAAAGTTGAAAGAGATTC+TGG 0.321272 7_3:-31288664 Msa1100870:CDS
GGCAGATTGTTCAGAATATA+AGG 0.321391 7_3:-31290379 Msa1100870:CDS
TGAGATTGCTGTTGTGAAAA+AGG 0.325029 7_3:-31289271 Msa1100870:CDS
AAATGGCAACGCTAGCTAAA+TGG 0.327704 7_3:+31285763 None:intergenic
ACGGAACGGACTAGTACTTC+TGG 0.328930 7_3:-31287934 Msa1100870:CDS
TGCTTACTTCTGCAGTTCCT+GGG 0.334858 7_3:-31289194 Msa1100870:CDS
TGCAAAATATTGTGAAATAA+TGG 0.336117 7_3:-31286376 Msa1100870:three_prime_UTR
TTGAAACCATCTGGTCCTTC+TGG 0.338732 7_3:+31288228 None:intergenic
TGTTAGAATCTATGGATAAT+GGG 0.347034 7_3:-31286707 Msa1100870:three_prime_UTR
TAAGAGATTGAGGGCCTGTT+TGG 0.348985 7_3:-31286037 Msa1100870:three_prime_UTR
GGTGGTCCTTATGGAGCTTA+TGG 0.351103 7_3:-31287967 Msa1100870:CDS
CTTTGCCCTGTTCGCAAAAT+CGG 0.354517 7_3:-31291531 Msa1100870:CDS
GAATTCTGATGAGCTTGTTC+AGG 0.354751 7_3:-31290297 Msa1100870:intron
TCGTTGGTGTTTAGTTTGAA+TGG 0.355963 7_3:-31286859 Msa1100870:three_prime_UTR
TAAGATTACAAAAGGTCATT+TGG 0.356080 7_3:-31285141 Msa1100870:three_prime_UTR
CATGCCACTTTGAGATTCCT+TGG 0.358513 7_3:-31285321 Msa1100870:three_prime_UTR
TTAGTTTGAATGGGCTAGTC+TGG 0.362522 7_3:-31286849 Msa1100870:three_prime_UTR
GCTCCGATTGGTGGTGGTTA+TGG 0.363624 7_3:-31289111 Msa1100870:CDS
CTATCCACGGTCCATGTATC+CGG 0.368979 7_3:-31289064 Msa1100870:CDS
CTGAAGCCTACTGCCTAAAC+TGG 0.371136 7_3:-31287472 Msa1100870:three_prime_UTR
TTCAATAGTCTCCACATGTT+TGG 0.377132 7_3:+31287346 None:intergenic
CAATGGTGGGTTCTCATGGT+GGG 0.382167 7_3:-31289152 Msa1100870:CDS
TAGGGAGATCCTCCTTAGAT+AGG 0.383114 7_3:+31288524 None:intergenic
TAACATCCGCATCCTATCTA+AGG 0.386726 7_3:-31288536 Msa1100870:CDS
CATGGTGGGGCTCCAATTAT+GGG 0.388437 7_3:-31289138 Msa1100870:CDS
GGTGGTTATGGAGGGTATAA+AGG 0.389407 7_3:-31289099 Msa1100870:CDS
GCATGCGGTCGGTGGTTCAA+TGG 0.390381 7_3:-31289169 Msa1100870:CDS
GTGGTATAATAAATCAAATT+AGG 0.394131 7_3:-31288954 Msa1100870:CDS
ATCAAATTAGGCAGGATTCT+GGG 0.396448 7_3:-31288942 Msa1100870:CDS
GGCTTAGCCACATCTAGTTA+AGG 0.398310 7_3:-31286107 Msa1100870:three_prime_UTR
AACGGTAAACGGTGTCGTCT+TGG 0.400100 7_3:+31291556 None:intergenic
CCCAGTGACTGACAAATTCA+TGG 0.406816 7_3:-31287396 Msa1100870:three_prime_UTR
TGACTGCTTAATAGCCATTT+CGG 0.407826 7_3:-31288881 Msa1100870:CDS
TCATAAACTCAGGGTCCGTT+TGG 0.409486 7_3:+31285815 None:intergenic
TGAAGATGAAGACGTTGATA+TGG 0.412280 7_3:-31291280 Msa1100870:CDS
CGTTGGTGTTTAGTTTGAAT+GGG 0.415931 7_3:-31286858 Msa1100870:three_prime_UTR
ACGGTAAACGGTGTCGTCTT+GGG 0.416434 7_3:+31291557 None:intergenic
TGCATATTGGATTGTCCTCT+AGG 0.416941 7_3:-31285720 Msa1100870:three_prime_UTR
GCTATTTAAAACAACTGCTC+TGG 0.418782 7_3:+31286579 None:intergenic
GAGTGGTTTCGTCGGTGTTA+GGG 0.420306 7_3:+31291601 None:intergenic
ATATTTCATCATTCGATCAC+TGG 0.420864 7_3:-31285620 Msa1100870:three_prime_UTR
GGCGACGGTTATGGAAACTA+TGG 0.421841 7_3:-31288120 Msa1100870:CDS
TTCTACCTCTCTCGCCGAAA+TGG 0.422570 7_3:+31288867 None:intergenic
CTGCTATGGATGCGCTTGTC+AGG 0.423616 7_3:-31291341 Msa1100870:CDS
TGCACAGATTAGGATTCTTA+AGG 0.423719 7_3:-31290345 Msa1100870:CDS
GCCATGAATTTGTCAGTCAC+TGG 0.424683 7_3:+31287395 None:intergenic
TTTCGTCGGTGTTAGGGTTA+CGG 0.427146 7_3:+31291607 None:intergenic
GATCAGATTGGGTGTGTGAT+TGG 0.428636 7_3:-31290410 Msa1100870:CDS
GCTTAGCCACATCTAGTTAA+GGG 0.430969 7_3:-31286106 Msa1100870:three_prime_UTR
AACCATGGTTACTAAAACCT+TGG 0.433601 7_3:-31287698 Msa1100870:exon
GTTAGGGTTACGGCGTTTGT+TGG 0.434599 7_3:+31291617 None:intergenic
GAATGAGACAGGTAATCTAT+TGG 0.438851 7_3:-31285175 Msa1100870:three_prime_UTR
GGAGGGTATAAAGGTGATGT+TGG 0.439030 7_3:-31289090 Msa1100870:CDS
TATAACCAGAGGAGCCGAAC+TGG 0.439048 7_3:+31286912 None:intergenic
GGGTGTGTGATTGGGAAAGG+TGG 0.439775 7_3:-31290401 Msa1100870:CDS
TCTGGTCCTTCTGGCGAAGC+AGG 0.442517 7_3:+31288237 None:intergenic
CGAATCGGTGAAACTGTTCC+TGG 0.442677 7_3:-31291444 Msa1100870:CDS
GATTCTAACAGAAATTGTTT+GGG 0.442973 7_3:+31286720 None:intergenic
GTGAGACCGGTGCACAGATT+AGG 0.445354 7_3:-31290355 Msa1100870:CDS
CAATGTTCATTGAATGCAGT+TGG 0.445821 7_3:-31285208 Msa1100870:three_prime_UTR
TTCAACTTTCTCACTGCACC+GGG 0.446932 7_3:+31288675 None:intergenic
TCCTGGACGGCTATGATGTT+AGG 0.449333 7_3:-31286249 Msa1100870:three_prime_UTR
TATTATTTATAAATTTGTTA+AGG 0.449726 7_3:+31285896 None:intergenic
ATCCCTTGAGCCCGGATACA+TGG 0.451086 7_3:+31289053 None:intergenic
AACCTTGATGCCTCTATCTA+GGG 0.451615 7_3:-31287371 Msa1100870:three_prime_UTR
CCACCGACCGCATGCACCCC+AGG 0.454483 7_3:+31289177 None:intergenic
TACTTGCACAAGAGCGTCCT+TGG 0.454929 7_3:+31288338 None:intergenic
CGTCTTCCAGTTTAGGCAGT+AGG 0.458624 7_3:+31287466 None:intergenic
CCTTCATAGTTGAAACCATC+TGG 0.458835 7_3:+31288219 None:intergenic
TATTCTTATTCTGATGGCTA+TGG 0.459228 7_3:-31288165 Msa1100870:CDS
CTAAGGCTGTACAGCCATCC+TGG 0.459243 7_3:-31286266 Msa1100870:three_prime_UTR
TCGCTGAATCTGCAGATCTC+TGG 0.459290 7_3:-31289294 Msa1100870:intron
AAAACAAGCTTAATCCAAAC+AGG 0.461819 7_3:+31286023 None:intergenic
GACAGGTAATCTATTGGATT+AGG 0.465622 7_3:-31285169 Msa1100870:three_prime_UTR
GTTATGTGAAATGTGTCTCT+TGG 0.468813 7_3:+31291579 None:intergenic
TGAGTTTATGTGTCCTGCTA+TGG 0.469447 7_3:-31291355 Msa1100870:CDS
AGTTTAGGCAGTAGGCTTCA+GGG 0.470110 7_3:+31287474 None:intergenic
GTATTCTCTCTTTCACTAGC+CGG 0.470671 7_3:-31288642 Msa1100870:CDS
AAATATCAAGGTTGATAGTT+CGG 0.471588 7_3:-31288917 Msa1100870:CDS
CAAGCATATGGATTGGAAGT+TGG 0.472542 7_3:+31286164 None:intergenic
GTTCGCAAGCTTAGGAAGTA+AGG 0.474273 7_3:+31287304 None:intergenic
TATGGTAAATAGTTGAGATT+CGG 0.474547 7_3:-31285269 Msa1100870:three_prime_UTR
GGTTCAATGGTGGGTTCTCA+TGG 0.474828 7_3:-31289156 Msa1100870:CDS
TTCTCACAATTCACAATGGC+TGG 0.477989 7_3:-31291705 Msa1100870:exon
CATTGGAGGTGTTATAGGTA+AGG 0.479056 7_3:-31288980 Msa1100870:CDS
CGGAACGGACTAGTACTTCT+GGG 0.479809 7_3:-31287933 Msa1100870:intron
CCGATTGGTGGTGGTTATGG+AGG 0.480814 7_3:-31289108 Msa1100870:CDS
TGCAACTGAAGATGATGAAA+TGG 0.481672 7_3:-31288497 Msa1100870:CDS
TTCATCTCGTCTTCCAGTTT+AGG 0.485689 7_3:+31287459 None:intergenic
ATTTAACGCACAAGACTGTA+AGG 0.488292 7_3:+31287063 None:intergenic
TGCGGTCGGTGGTTCAATGG+TGG 0.489344 7_3:-31289166 Msa1100870:CDS
TGAATACAAGATTGGTTCGT+TGG 0.490609 7_3:-31286875 Msa1100870:three_prime_UTR
TGTGTTTATGCAGTTCTTTG+AGG 0.490670 7_3:-31288740 Msa1100870:intron
ACAACTACGTCTTGATACTA+AGG 0.490919 7_3:-31291475 Msa1100870:CDS
ATTGGTTGCCTTATTGGTAA+AGG 0.491056 7_3:-31288598 Msa1100870:CDS
TTTCAACTTTCTCACTGCAC+CGG 0.491500 7_3:+31288674 None:intergenic
AGATAGTACAGGTATACAAC+TGG 0.491875 7_3:+31287181 None:intergenic
CTGGTGTCAAGCTCTCGAAT+TGG 0.492427 7_3:-31288616 Msa1100870:CDS
GAGAGCTTGACACCAGTAAC+CGG 0.492678 7_3:+31288623 None:intergenic
AGGGCAAAGGTAACGGTAAA+CGG 0.493030 7_3:+31291545 None:intergenic
AATGAAACTAAACACCGAAC+TGG 0.494714 7_3:-31286226 Msa1100870:three_prime_UTR
CTTGTGGCGTCTGATCAGAT+TGG 0.495578 7_3:-31290422 Msa1100870:CDS
GAGCACATGTTCGCAAGCTT+AGG 0.498749 7_3:+31287296 None:intergenic
CTTGTATATGTAAGAGATTG+AGG 0.500205 7_3:-31286047 Msa1100870:three_prime_UTR
AAACAAACAAGCATATGGAT+TGG 0.500704 7_3:+31286157 None:intergenic
TCTTATTCTGATGGCTATGG+AGG 0.500846 7_3:-31288162 Msa1100870:CDS
TTGTGATGAGCGTGTTGTTA+CGG 0.501109 7_3:-31291421 Msa1100870:CDS
ATCAGATTGGGTGTGTGATT+GGG 0.501919 7_3:-31290409 Msa1100870:CDS
AAAGGCTCTGATTCAGGTTG+CGG 0.503958 7_3:-31289253 Msa1100870:CDS
GCGGTCGGTGGTTCAATGGT+GGG 0.504275 7_3:-31289165 Msa1100870:CDS
TATAAGTACAAGAGGTTATG+AGG 0.504979 7_3:-31285411 Msa1100870:three_prime_UTR
CTCAATCTCTTACATATACA+AGG 0.508204 7_3:+31286048 None:intergenic
GATTTCTTCAGGAATGAGAC+AGG 0.508273 7_3:-31285186 Msa1100870:three_prime_UTR
AGGGTTACGGCGTTTGTTGG+TGG 0.510030 7_3:+31291620 None:intergenic
TCAATGGTGGGTTCTCATGG+TGG 0.510611 7_3:-31289153 Msa1100870:CDS
AGATTGTCCGACAGATTGTC+TGG 0.513148 7_3:-31287740 Msa1100870:CDS
CAAGACTAATATCCAACAGT+TGG 0.514667 7_3:+31285386 None:intergenic
CACAGCTGCTTCAATTGTTG+CGG 0.514880 7_3:+31288708 None:intergenic
GAATGGACTGAATACAAGAT+TGG 0.515824 7_3:-31286883 Msa1100870:three_prime_UTR
TTGTGGCGTCTGATCAGATT+GGG 0.517025 7_3:-31290421 Msa1100870:CDS
ATGTTTGGTCCCCTAGATAG+AGG 0.517490 7_3:+31287361 None:intergenic
GATTGTCTGGTGGTGTATCT+CGG 0.518577 7_3:-31287727 Msa1100870:CDS
TATAATAAATCAAATTAGGC+AGG 0.519067 7_3:-31288950 Msa1100870:CDS
TAGCAGTTGGACAAACAAAT+CGG 0.520156 7_3:+31289004 None:intergenic
GCAGGAAGATATGCAAGTAC+TGG 0.523882 7_3:+31288255 None:intergenic
AAACCTTGGTGGGTCCCTGC+AGG 0.524068 7_3:-31287684 Msa1100870:intron
CCAGATGGTTTCAACTATGA+AGG 0.524623 7_3:-31288219 Msa1100870:CDS
CATATGCGGCAGCTTGGTCG+AGG 0.527118 7_3:-31287988 Msa1100870:intron
AACTATACACCACACCAGTT+CGG 0.527690 7_3:+31286212 None:intergenic
GGTGGCTATTCTTATTCTGA+TGG 0.527717 7_3:-31288171 Msa1100870:CDS
CTCTACACAACAATGCTGTA+AGG 0.527950 7_3:+31286344 None:intergenic
TTGTATATGTAAGAGATTGA+GGG 0.528732 7_3:-31286046 Msa1100870:three_prime_UTR
TGCAGTTCCTGGGGTGCATG+CGG 0.530426 7_3:-31289184 Msa1100870:CDS
ATGGGAATGGCTCCGATTGG+TGG 0.530538 7_3:-31289120 Msa1100870:CDS
TATCTTCCTGCTTCGCCAGA+AGG 0.531028 7_3:-31288243 Msa1100870:CDS
TCCTAACATCATAGCCGTCC+AGG 0.531222 7_3:+31286248 None:intergenic
TGCGAACAGGGCAAAGGTAA+CGG 0.532303 7_3:+31291538 None:intergenic
CAGAATGGTGCTGTTTAACA+TGG 0.532916 7_3:+31285480 None:intergenic
CCTCCATAACCACCACCAAT+CGG 0.537459 7_3:+31289108 None:intergenic
TATTTCATCATTCGATCACT+GGG 0.537759 7_3:-31285619 Msa1100870:three_prime_UTR
GTTCCTGGGGTGCATGCGGT+CGG 0.538506 7_3:-31289180 Msa1100870:CDS
CTCTGGTTATATGAGCTGAA+TGG 0.538675 7_3:-31286900 Msa1100870:three_prime_UTR
TAACTTCCATAAGCTCCATA+AGG 0.538976 7_3:+31287961 None:intergenic
GTTTGTCCAACTGCTAACAT+TGG 0.542273 7_3:-31288997 Msa1100870:CDS
TAAATTTGAAAGACCTTGTG+TGG 0.543201 7_3:-31287045 Msa1100870:three_prime_UTR
GGTGTGTGATTGGGAAAGGT+GGG 0.544155 7_3:-31290400 Msa1100870:CDS
GGATTCTGGGGCAAATATCA+AGG 0.544315 7_3:-31288929 Msa1100870:CDS
TATCCACGGTCCATGTATCC+GGG 0.544857 7_3:-31289063 Msa1100870:CDS
TGTTTAACATGGCATTTATG+TGG 0.545748 7_3:+31285491 None:intergenic
CATCATTCGATCACTGGGAA+AGG 0.546009 7_3:-31285614 Msa1100870:three_prime_UTR
AAGCAAAACCTATAAGATAG+TGG 0.547039 7_3:+31286963 None:intergenic
ATTGGGTGTGTGATTGGGAA+AGG 0.547162 7_3:-31290404 Msa1100870:CDS
CCATGAATTTGTCAGTCACT+GGG 0.547663 7_3:+31287396 None:intergenic
TTAGGATTCTTAAGGATGAT+CGG 0.549307 7_3:-31290337 Msa1100870:CDS
AAGACTAATATCCAACAGTT+GGG 0.549472 7_3:+31285387 None:intergenic
TATCCGGGCTCAAGGGATGA+AGG 0.550864 7_3:-31289048 Msa1100870:CDS
ATCGGAAGCATCATTGGCCG+CGG 0.552394 7_3:-31291513 Msa1100870:CDS
TTCAACTATGAAGGTAGAGA+TGG 0.552487 7_3:-31288210 Msa1100870:CDS
TTGATTTATATAAATTGTGA+AGG 0.552775 7_3:-31286639 Msa1100870:three_prime_UTR
GTGAAATGTGTCTCTTGGAG+TGG 0.554448 7_3:+31291584 None:intergenic
CTGACAAGCGCATCCATAGC+AGG 0.554642 7_3:+31291342 None:intergenic
GCATATTGGATTGTCCTCTA+GGG 0.556453 7_3:-31285719 Msa1100870:three_prime_UTR
GTCTCTTGGAGTGGTTTCGT+CGG 0.557133 7_3:+31291593 None:intergenic
CCTGGGGTGCATGCGGTCGG+TGG 0.557609 7_3:-31289177 Msa1100870:CDS
TGAAGACGTTGATATGGAGA+AGG 0.558240 7_3:-31291274 Msa1100870:intron
TCTACCTTTGAGGTCTAGCA+CGG 0.558308 7_3:-31286128 Msa1100870:three_prime_UTR
AATGGTGGGTTCTCATGGTG+GGG 0.558992 7_3:-31289151 Msa1100870:CDS
GAACCTTCATCCCTTGAGCC+CGG 0.559965 7_3:+31289045 None:intergenic
GGATGGAGGGGATTTGGTCA+CGG 0.560016 7_3:-31290453 Msa1100870:CDS
GGTTGCCTTATTGGTAAAGG+AGG 0.560805 7_3:-31288595 Msa1100870:CDS
TCAAATTAGGCAGGATTCTG+GGG 0.561605 7_3:-31288941 Msa1100870:CDS
GGAATGGCTCCGATTGGTGG+TGG 0.561692 7_3:-31289117 Msa1100870:CDS
TGGAAACTATGGAAGTTCAC+AGG 0.562268 7_3:-31288109 Msa1100870:intron
GCTTACTTCTGCAGTTCCTG+GGG 0.562545 7_3:-31289193 Msa1100870:CDS
CATGGTTACTAAAACCTTGG+TGG 0.562818 7_3:-31287695 Msa1100870:exon
ATTTGTCAGTCACTGGGTAG+AGG 0.566631 7_3:+31287402 None:intergenic
CGACAAAACAAAGATAGTAC+AGG 0.570158 7_3:+31287170 None:intergenic
GGTTATGAGGACCCAACTGT+TGG 0.571493 7_3:-31285398 Msa1100870:three_prime_UTR
CTCTGATGTTATCAGGTGGA+TGG 0.572368 7_3:-31290470 Msa1100870:intron
GTCCATGTATCCGGGCTCAA+GGG 0.574091 7_3:-31289055 Msa1100870:CDS
ACACCTCCAATGTTAGCAGT+TGG 0.575469 7_3:+31288991 None:intergenic
CTCTTGTGCAAGTACTTACC+CGG 0.576314 7_3:-31288329 Msa1100870:CDS
GGCTGTACAGCCATCCTGGA+CGG 0.578390 7_3:-31286262 Msa1100870:three_prime_UTR
AATAGCCATTTCGGCGAGAG+AGG 0.578458 7_3:-31288872 Msa1100870:intron
TGTCCAACTGCTAACATTGG+AGG 0.579765 7_3:-31288994 Msa1100870:CDS
TCCCCTAGATAGAGGCATCA+AGG 0.580833 7_3:+31287369 None:intergenic
TACAGGTATACAACTGGCAA+AGG 0.581153 7_3:+31287187 None:intergenic
ACATGTCACATCATAAACTC+AGG 0.582005 7_3:+31285805 None:intergenic
TCAATGAACATTGCAGACCA+AGG 0.582036 7_3:+31285218 None:intergenic
CAATGAACATTGCAGACCAA+GGG 0.582325 7_3:+31285219 None:intergenic
CTGGGTAGAGGCGTCAAGGT+GGG 0.583814 7_3:+31287414 None:intergenic
GTCACTGGGTAGAGGCGTCA+AGG 0.585145 7_3:+31287410 None:intergenic
GGTCACGGCGAAATTGCTTG+TGG 0.585277 7_3:-31290438 Msa1100870:CDS
CTCTGATTCAGGTTGCGGCA+CGG 0.585528 7_3:-31289248 Msa1100870:CDS
GGTGTTATAGGTAAGGGCGG+TGG 0.586093 7_3:-31288973 Msa1100870:CDS
CTTACAGCATTGTTGTGTAG+AGG 0.586603 7_3:-31286343 Msa1100870:three_prime_UTR
TGATGTTATCAGGTGGATGG+AGG 0.586758 7_3:-31290467 Msa1100870:intron
CAATCATTACTGAGATGAGA+AGG 0.587009 7_3:-31288570 Msa1100870:CDS
CTAGATAGAGGCATCAAGGT+TGG 0.587204 7_3:+31287373 None:intergenic
ATAATCAATTAATCACAGAA+TGG 0.587487 7_3:+31285465 None:intergenic
AAGGGATGAAGGTTCTCCGA+TGG 0.587530 7_3:-31289037 Msa1100870:CDS
TTCGATCACTGGGAAAGGCT+AGG 0.587738 7_3:-31285609 Msa1100870:three_prime_UTR
TGGGGCTCCAATTATGGGAA+TGG 0.589051 7_3:-31289133 Msa1100870:CDS
ATTGGAGGTGTTATAGGTAA+GGG 0.591478 7_3:-31288979 Msa1100870:CDS
CGATTGGTGGTGGTTATGGA+GGG 0.591635 7_3:-31289107 Msa1100870:CDS
GGAAGATATGCAAGTACTGG+TGG 0.592745 7_3:+31288258 None:intergenic
GTTGATAGTTCGGCAACTGA+AGG 0.592881 7_3:-31288907 Msa1100870:CDS
ATCTGTTGTCGATCTACTGT+AGG 0.593713 7_3:-31286079 Msa1100870:three_prime_UTR
GATGTTATCAGGTGGATGGA+GGG 0.594519 7_3:-31290466 Msa1100870:intron
ATGGTTACTAAAACCTTGGT+GGG 0.595179 7_3:-31287694 Msa1100870:exon
AGCAAATGTTGAGTACGTGA+AGG 0.595406 7_3:+31289213 None:intergenic
GTTAGTCGTATAAGTACAAG+AGG 0.595664 7_3:-31285419 Msa1100870:three_prime_UTR
CAGAATATAAGGAGTGAGAC+CGG 0.595890 7_3:-31290368 Msa1100870:CDS
ACGTGTTCAGAAGACAGATA+AGG 0.596941 7_3:+31285440 None:intergenic
ACTAAGGCGAAGATTCGAAT+CGG 0.598264 7_3:-31291459 Msa1100870:CDS
ATGCAACCCTTAACTAGATG+TGG 0.598895 7_3:+31286100 None:intergenic
GGTAGAGATGGAAGACGACA+TGG 0.599304 7_3:-31288198 Msa1100870:CDS
AGCTTATGGAAGTTATGCTA+CGG 0.600781 7_3:-31287953 Msa1100870:CDS
TTATCATTGATCAATAGGAA+AGG 0.601346 7_3:-31285582 Msa1100870:three_prime_UTR
CATCAACGCTGTTGTGTGAG+TGG 0.601645 7_3:+31291652 None:intergenic
GCTTGTCAGGATTCATCAGA+AGG 0.601873 7_3:-31291328 Msa1100870:CDS
TGAAGATGATGAAATGGTGC+AGG 0.602115 7_3:-31288491 Msa1100870:intron
TGGATCAGTGTTGTCAATTG+CGG 0.602560 7_3:+31286292 None:intergenic
GATCCTCCTTAGATAGGATG+CGG 0.604218 7_3:+31288530 None:intergenic
ATCAACGCTGTTGTGTGAGT+GGG 0.604536 7_3:+31291653 None:intergenic
TGAACAAGTTCCATAATCCA+AGG 0.604569 7_3:+31285304 None:intergenic
ATGCGGCAGCTTGGTCGAGG+TGG 0.604698 7_3:-31287985 Msa1100870:intron
ATTGATCAATAGGAAAGGCT+AGG 0.605002 7_3:-31285577 Msa1100870:three_prime_UTR
ACATTGCAGACCAAGGGGAG+AGG 0.605920 7_3:+31285225 None:intergenic
ATTATGGGAATGGCTCCGAT+TGG 0.609678 7_3:-31289123 Msa1100870:CDS
CCATTATCCATAGATTCTAA+CGG 0.610541 7_3:+31286670 None:intergenic
AAGAATCCTAATCTGTGCAC+CGG 0.611412 7_3:+31290349 None:intergenic
ATTGCGGATAGCGGAAATAG+CGG 0.611559 7_3:+31286308 None:intergenic
CATCCGCATCCTATCTAAGG+AGG 0.616844 7_3:-31288533 Msa1100870:CDS
GGAAGCATCATTGGCCGCGG+CGG 0.618048 7_3:-31291510 Msa1100870:CDS
GATGGAAGACGACATGGACG+TGG 0.622802 7_3:-31288192 Msa1100870:CDS
GCTGGTCAAAGAACATCCTA+CGG 0.624883 7_3:-31291687 Msa1100870:CDS
TATCTAGGGGACCAAACATG+TGG 0.625382 7_3:-31287357 Msa1100870:three_prime_UTR
GCAAATGTTGAGTACGTGAA+GGG 0.628954 7_3:+31289214 None:intergenic
GCTTCGCCAGAAGGACCAGA+TGG 0.629484 7_3:-31288234 Msa1100870:CDS
ATGTTATCAGGTGGATGGAG+GGG 0.631700 7_3:-31290465 Msa1100870:intron
AACATCATAGCCGTCCAGGA+TGG 0.633212 7_3:+31286252 None:intergenic
ACAACACTGATCCAGAGCTA+AGG 0.637004 7_3:-31286283 Msa1100870:three_prime_UTR
GTGGGAACGTTTGTTGCCGT+AGG 0.637858 7_3:+31291671 None:intergenic
TAAGCCGTGCTAGACCTCAA+AGG 0.638003 7_3:+31286124 None:intergenic
TCATCAGAAGGTGATTGCTG+AGG 0.638299 7_3:-31291316 Msa1100870:CDS
GCAAGTAACTATGAACTACC+AGG 0.638924 7_3:+31287141 None:intergenic
ATTAAATGAACTAGCCCTAG+AGG 0.639234 7_3:+31285705 None:intergenic
ATTGCTGAGGATTTGCGTGG+TGG 0.640532 7_3:-31291303 Msa1100870:CDS
GCAGTGAGTTTGTCAAACCA+TGG 0.642376 7_3:+31287436 None:intergenic
GAAGCTAAAATCTACCTGCA+GGG 0.642778 7_3:+31287670 None:intergenic
ACTGCAATACAGACCACACA+AGG 0.647395 7_3:+31287032 None:intergenic
GTGTTGTCAATTGCGGATAG+CGG 0.651012 7_3:+31286299 None:intergenic
ACAACACGCTCATCACAACC+AGG 0.651674 7_3:+31291426 None:intergenic
GGAAGACGACATGGACGTGG+TGG 0.651683 7_3:-31288189 Msa1100870:CDS
TTTAGATCTAAAACACCATG+TGG 0.652874 7_3:-31287217 Msa1100870:three_prime_UTR
ACCTTGATGCCTCTATCTAG+GGG 0.653496 7_3:-31287370 Msa1100870:three_prime_UTR
TCAGAATTCAGCGCACAAAG+TGG 0.655152 7_3:+31290311 None:intergenic
CTACCTGCAGGGACCCACCA+AGG 0.655648 7_3:+31287681 None:intergenic
CTGGAAGACGAGATGAACCA+TGG 0.661796 7_3:-31287453 Msa1100870:three_prime_UTR
GAAGTAAGGTAAAATGGACA+TGG 0.661826 7_3:+31287318 None:intergenic
AATCGGACTGAAAACTCCAT+CGG 0.665768 7_3:+31289021 None:intergenic
ACAATTCTCACAATTCACAA+TGG 0.665812 7_3:-31291709 Msa1100870:exon
ACTGGGTAGAGGCGTCAAGG+TGG 0.670676 7_3:+31287413 None:intergenic
TACACCACCAGACAATCTGT+CGG 0.671440 7_3:+31287733 None:intergenic
AACTAAACACCGAACTGGTG+TGG 0.672580 7_3:-31286221 Msa1100870:three_prime_UTR
TAATCCAAGGAATCTCAAAG+TGG 0.676593 7_3:+31285317 None:intergenic
CATTCAGCTCATATAACCAG+AGG 0.678713 7_3:+31286901 None:intergenic
GTGATTGCTGAGGATTTGCG+TGG 0.679408 7_3:-31291306 Msa1100870:CDS
GTTTCACGATCTCGCCGCCG+CGG 0.681169 7_3:+31291496 None:intergenic
AATGAACATTGCAGACCAAG+GGG 0.681914 7_3:+31285220 None:intergenic
CATGTCACATCATAAACTCA+GGG 0.685338 7_3:+31285806 None:intergenic
ATGGAAGTTATGCTACGGAA+CGG 0.690137 7_3:-31287948 Msa1100870:CDS
GGCAAAGGAACATATCCACA+TGG 0.696425 7_3:+31287202 None:intergenic
TCAACTTTCTCACTGCACCG+GGG 0.700169 7_3:+31288676 None:intergenic
GGAGGTGTTATAGGTAAGGG+CGG 0.712082 7_3:-31288976 Msa1100870:CDS
GTATCTCGGAGGAGAAACCA+TGG 0.714795 7_3:-31287713 Msa1100870:CDS
TTGTCCGACAGATTGTCTGG+TGG 0.724794 7_3:-31287737 Msa1100870:CDS
GTGATGTTGGAGACTATCCA+CGG 0.725781 7_3:-31289077 Msa1100870:CDS
TGTCTGGTGGTGTATCTCGG+AGG 0.726292 7_3:-31287724 Msa1100870:CDS
GAGCCCGGATACATGGACCG+TGG 0.743404 7_3:+31289060 None:intergenic
GCAATAGCGCTATTGCCTAG+CGG 0.755960 7_3:-31286544 Msa1100870:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAAAAATTTAATTTT+TGG - chr7_3:31285575-31285594 Msa1100870:three_prime_UTR 0.0%
!! AAAGAATATGATATAATATT+TGG - chr7_3:31285815-31285834 Msa1100870:three_prime_UTR 10.0%
!!! AAAAAAAAAAAACCATTTTT+TGG - chr7_3:31286136-31286155 Msa1100870:three_prime_UTR 10.0%
!! TTTGAATAATATAATGATAT+TGG - chr7_3:31289713-31289732 Msa1100870:intron 10.0%
!!! TTTTTTTTTGCTTATAATAG+TGG + chr7_3:31286122-31286141 None:intergenic 15.0%
!! TTTAATTATTGTTTCATATG+CGG - chr7_3:31288812-31288831 Msa1100870:intron 15.0%
!! TTGATTTATATAAATTGTGA+AGG - chr7_3:31290175-31290194 Msa1100870:intron 15.0%
!!! TAATTGTATTGTATGTTTTT+AGG - chr7_3:31291292-31291311 Msa1100870:CDS 15.0%
!!! ATGATATTAGTTTTTGAGTT+AGG - chr7_3:31285683-31285702 Msa1100870:three_prime_UTR 20.0%
!! TATTCAATGAATCCAAAAAA+TGG + chr7_3:31286151-31286170 None:intergenic 20.0%
!!! ATGTATCTAAAGCTTATTAT+AGG + chr7_3:31286188-31286207 None:intergenic 20.0%
!! TTTATTATAATAGTGACCAA+AGG - chr7_3:31286240-31286259 Msa1100870:three_prime_UTR 20.0%
!! AAAATATCAGAAAGAGATTA+GGG + chr7_3:31286319-31286338 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCTAAAG+TGG + chr7_3:31286677-31286696 None:intergenic 20.0%
!! AAAATAACTTATAGCTTACA+TGG + chr7_3:31286802-31286821 None:intergenic 20.0%
!!! AATCTAATGTTTTCAAATAG+CGG - chr7_3:31286871-31286890 Msa1100870:three_prime_UTR 20.0%
!! GTGGTATAATAAATCAAATT+AGG - chr7_3:31287860-31287879 Msa1100870:intron 20.0%
!! TATAATAAATCAAATTAGGC+AGG - chr7_3:31287864-31287883 Msa1100870:intron 20.0%
!!! AATCAATTTGTTTTGTCATA+TGG - chr7_3:31287998-31288017 Msa1100870:intron 20.0%
!!! ATCAATTTGTTTTGTCATAT+GGG - chr7_3:31287999-31288018 Msa1100870:intron 20.0%
!! TAAAATCCTGGAAAAATTAA+TGG + chr7_3:31288744-31288763 None:intergenic 20.0%
!! ATAAACTACAAAATAAATCG+AGG + chr7_3:31289169-31289188 None:intergenic 20.0%
!!! TTAAGGAAAGCTATTTTTAT+AGG + chr7_3:31289551-31289570 None:intergenic 20.0%
!! AATAAAAAAAGCAGTCATTA+AGG + chr7_3:31289568-31289587 None:intergenic 20.0%
!! TACAAATCTCATTCTTTAAT+AGG - chr7_3:31290315-31290334 Msa1100870:CDS 20.0%
!! TGCAAAATATTGTGAAATAA+TGG - chr7_3:31290438-31290457 Msa1100870:CDS 20.0%
!!! TTTTCTAGTACATTTCTAAT+GGG - chr7_3:31290623-31290642 Msa1100870:intron 20.0%
!! TAAAAATAAGCTAATCCAAA+CGG - chr7_3:31290984-31291003 Msa1100870:intron 20.0%
!!! ATTTTATATGGGAAGTAAAA+TGG + chr7_3:31291071-31291090 None:intergenic 20.0%
!!! AATATGCACACATTTTATAT+GGG + chr7_3:31291082-31291101 None:intergenic 20.0%
!! GTTATTTATCATTGATCAAT+AGG - chr7_3:31291227-31291246 Msa1100870:intron 20.0%
!! ATAATCAATTAATCACAGAA+TGG + chr7_3:31291352-31291371 None:intergenic 20.0%
! TATTATAGTTTCTCAATGTC+TGG - chr7_3:31285603-31285622 Msa1100870:three_prime_UTR 25.0%
! ATTATAGTTTCTCAATGTCT+GGG - chr7_3:31285604-31285623 Msa1100870:three_prime_UTR 25.0%
! GTGTAATTCTTTAAGCTATT+CGG - chr7_3:31285732-31285751 Msa1100870:three_prime_UTR 25.0%
! AAAAACTAATATTACGACTG+AGG + chr7_3:31286047-31286066 None:intergenic 25.0%
! TTTATTGAGATTGTTGAATC+TGG - chr7_3:31286064-31286083 Msa1100870:three_prime_UTR 25.0%
! TAAATTACTAGTTACACCTT+TGG + chr7_3:31286259-31286278 None:intergenic 25.0%
! CAAAATATCAGAAAGAGATT+AGG + chr7_3:31286320-31286339 None:intergenic 25.0%
!! TTGTGATGAACCTTTTTAAT+TGG - chr7_3:31286551-31286570 Msa1100870:three_prime_UTR 25.0%
!!! TGTGATGAACCTTTTTAATT+GGG - chr7_3:31286552-31286571 Msa1100870:three_prime_UTR 25.0%
! ATAGCAAAGTAGAATTTGAA+CGG - chr7_3:31287031-31287050 Msa1100870:three_prime_UTR 25.0%
! ACATACAACAATTTCTCATT+CGG + chr7_3:31287489-31287508 None:intergenic 25.0%
!!! AAATATCAAGGTTGATAGTT+CGG - chr7_3:31287897-31287916 Msa1100870:intron 25.0%
! AAATAGTAGTTCAGAATCAT+CGG + chr7_3:31288411-31288430 None:intergenic 25.0%
!! TTCTCAATGCTTTTAGATTT+CGG - chr7_3:31288438-31288457 Msa1100870:intron 25.0%
!! TTACAACCATTAATTTTTCC+AGG - chr7_3:31288735-31288754 Msa1100870:intron 25.0%
! AGAACGTAAAATAAATGGTT+TGG + chr7_3:31288910-31288929 None:intergenic 25.0%
! ACGTTAGAACGTAAAATAAA+TGG + chr7_3:31288915-31288934 None:intergenic 25.0%
! ACATGTATAGAGAAGAATAT+GGG + chr7_3:31288963-31288982 None:intergenic 25.0%
! AACATGTATAGAGAAGAATA+TGG + chr7_3:31288964-31288983 None:intergenic 25.0%
!!! TGAATGGTTTTAAGTAACAT+AGG + chr7_3:31289202-31289221 None:intergenic 25.0%
!!! AGCTATTTTTATAGGTTCTT+GGG + chr7_3:31289543-31289562 None:intergenic 25.0%
!!! AAGCTATTTTTATAGGTTCT+TGG + chr7_3:31289544-31289563 None:intergenic 25.0%
!!! AATGACTGCTTTTTTTATTC+CGG - chr7_3:31289569-31289588 Msa1100870:intron 25.0%
!!! TGGTTTTTTTTTTTGAGTGA+AGG - chr7_3:31289985-31290004 Msa1100870:intron 25.0%
! GATTCTAACAGAAATTGTTT+GGG + chr7_3:31290097-31290116 None:intergenic 25.0%
! AGATTCTAACAGAAATTGTT+TGG + chr7_3:31290098-31290117 None:intergenic 25.0%
! ACAATTTCTGTTAGAATCTA+TGG - chr7_3:31290099-31290118 Msa1100870:intron 25.0%
! TGTTAGAATCTATGGATAAT+GGG - chr7_3:31290107-31290126 Msa1100870:intron 25.0%
!!! GTTTTAAATAGCAGCAATAT+CGG - chr7_3:31290246-31290265 Msa1100870:intron 25.0%
!!! GTTTTCTAGTACATTTCTAA+TGG - chr7_3:31290622-31290641 Msa1100870:intron 25.0%
! TTGTATATGTAAGAGATTGA+GGG - chr7_3:31290768-31290787 Msa1100870:intron 25.0%
!! CAATATGCACACATTTTATA+TGG + chr7_3:31291083-31291102 None:intergenic 25.0%
! CATATAAAATGTGTGCATAT+TGG - chr7_3:31291081-31291100 Msa1100870:intron 25.0%
! CAAAATAGTGTGTGTTAAAA+TGG + chr7_3:31291150-31291169 None:intergenic 25.0%
! TTATCATTGATCAATAGGAA+AGG - chr7_3:31291232-31291251 Msa1100870:intron 25.0%
! TATGGTAAATAGTTGAGATT+CGG - chr7_3:31291545-31291564 Msa1100870:CDS 25.0%
!! TGACCTTTTGTAATCTTAAA+AGG + chr7_3:31291671-31291690 None:intergenic 25.0%
! TAAGATTACAAAAGGTCATT+TGG - chr7_3:31291673-31291692 Msa1100870:CDS 25.0%
GTTTGTGAATTGTGACTTTA+GGG + chr7_3:31285085-31285104 None:intergenic 30.0%
TGTTTGTGAATTGTGACTTT+AGG + chr7_3:31285086-31285105 None:intergenic 30.0%
ACAATTCTCACAATTCACAA+TGG - chr7_3:31285105-31285124 Msa1100870:three_prime_UTR 30.0%
!! TCGAATGATTTTGAAGATTC+TGG - chr7_3:31285436-31285455 Msa1100870:three_prime_UTR 30.0%
TACTTATGATTCACAAACAC+GGG + chr7_3:31285941-31285960 None:intergenic 30.0%
CTACTTATGATTCACAAACA+CGG + chr7_3:31285942-31285961 None:intergenic 30.0%
TTAGGATTCTTAAGGATGAT+CGG - chr7_3:31286477-31286496 Msa1100870:intron 30.0%
AATCTACAGCCCAATTAAAA+AGG + chr7_3:31286564-31286583 None:intergenic 30.0%
AATGTTGTAAATCCAGATCA+CGG + chr7_3:31286916-31286935 None:intergenic 30.0%
GTATTAAATAGCATCCACAT+GGG + chr7_3:31287062-31287081 None:intergenic 30.0%
!!! AGATTGACAACATTTTTTCC+TGG - chr7_3:31287155-31287174 Msa1100870:three_prime_UTR 30.0%
TACGAAAACAACTTACTGTT+CGG + chr7_3:31287239-31287258 None:intergenic 30.0%
! AAATGAACCGATTCAAATAG+AGG - chr7_3:31287311-31287330 Msa1100870:three_prime_UTR 30.0%
TATAGAGCCTCTATTTGAAT+CGG + chr7_3:31287321-31287340 None:intergenic 30.0%
ATAAGAAATGATTGAATGGC+TGG - chr7_3:31288023-31288042 Msa1100870:intron 30.0%
! CATCTTCAGTTGCAATTTTA+GGG + chr7_3:31288311-31288330 None:intergenic 30.0%
! TCATCTTCAGTTGCAATTTT+AGG + chr7_3:31288312-31288331 None:intergenic 30.0%
!!! TGATGTCTTTTTTGGGAAAT+CGG - chr7_3:31288373-31288392 Msa1100870:intron 30.0%
AATAGTAGTTCAGAATCATC+GGG + chr7_3:31288410-31288429 None:intergenic 30.0%
! TCTCAATGCTTTTAGATTTC+GGG - chr7_3:31288439-31288458 Msa1100870:intron 30.0%
! GAGAGCAAATCTTTTTGATA+AGG - chr7_3:31288510-31288529 Msa1100870:CDS 30.0%
TATTCTTATTCTGATGGCTA+TGG - chr7_3:31288649-31288668 Msa1100870:CDS 30.0%
!! TTTTTCCAGGATTTTAAGTG+CGG - chr7_3:31288748-31288767 Msa1100870:intron 30.0%
!!! TGGTTTTAAGTAACATAGGA+AGG + chr7_3:31289198-31289217 None:intergenic 30.0%
TCTGTTAATGCTAATGTGAA+TGG + chr7_3:31289218-31289237 None:intergenic 30.0%
ATGAGCATCAAAATTCTACA+TGG + chr7_3:31289266-31289285 None:intergenic 30.0%
!! GTTTTAGATCTAAAGACAAC+CGG + chr7_3:31289591-31289610 None:intergenic 30.0%
! TTTAGATCTAAAACACCATG+TGG - chr7_3:31289597-31289616 Msa1100870:intron 30.0%
TAAATTTGAAAGACCTTGTG+TGG - chr7_3:31289769-31289788 Msa1100870:intron 30.0%
AAGCAAAACCTATAAGATAG+TGG + chr7_3:31289854-31289873 None:intergenic 30.0%
!! TAGTTGAACTTTTTCCAGTT+CGG - chr7_3:31289888-31289907 Msa1100870:intron 30.0%
! AATTGTTTTCAAAACTGTGC+GGG + chr7_3:31290052-31290071 None:intergenic 30.0%
! GAATTGTTTTCAAAACTGTG+CGG + chr7_3:31290053-31290072 None:intergenic 30.0%
CTGTTAGAATCTATGGATAA+TGG - chr7_3:31290106-31290125 Msa1100870:intron 30.0%
ACAATTTCCGTTAGAATCTA+TGG - chr7_3:31290137-31290156 Msa1100870:intron 30.0%
CCATTATCCATAGATTCTAA+CGG + chr7_3:31290109-31290128 None:intergenic 30.0%
CGTTAGAATCTATGGATAAT+GGG - chr7_3:31290145-31290164 Msa1100870:intron 30.0%
AAAGAATGAGATTTGTATCG+CGG + chr7_3:31290312-31290331 None:intergenic 30.0%
AAACAAACAAGCATATGGAT+TGG + chr7_3:31290660-31290679 None:intergenic 30.0%
CTCAAAAACAAACAAGCATA+TGG + chr7_3:31290665-31290684 None:intergenic 30.0%
CTCAATCTCTTACATATACA+AGG + chr7_3:31290769-31290788 None:intergenic 30.0%
CTTGTATATGTAAGAGATTG+AGG - chr7_3:31290767-31290786 Msa1100870:intron 30.0%
AAAACAAGCTTAATCCAAAC+AGG + chr7_3:31290794-31290813 None:intergenic 30.0%
ATATTTCATCATTCGATCAC+TGG - chr7_3:31291194-31291213 Msa1100870:intron 30.0%
TATTTCATCATTCGATCACT+GGG - chr7_3:31291195-31291214 Msa1100870:intron 30.0%
TGTTTAACATGGCATTTATG+TGG + chr7_3:31291326-31291345 None:intergenic 30.0%
TATAAGTACAAGAGGTTATG+AGG - chr7_3:31291403-31291422 Msa1100870:CDS 30.0%
AAGACTAATATCCAACAGTT+GGG + chr7_3:31291430-31291449 None:intergenic 30.0%
!! ATTAGTCTTGCTCTATGTTT+AGG - chr7_3:31291441-31291460 Msa1100870:CDS 30.0%
! ATGGAACTTGTTCAAGTATT+TGG - chr7_3:31291519-31291538 Msa1100870:CDS 30.0%
TGTTCAAGTATTTGGAGATA+TGG - chr7_3:31291527-31291546 Msa1100870:CDS 30.0%
!!! AGGCCTTTTAAGATTACAAA+AGG - chr7_3:31291665-31291684 Msa1100870:CDS 30.0%
GTTATGTGAAATGTGTCTCT+TGG + chr7_3:31285238-31285257 None:intergenic 35.0%
ACAACTACGTCTTGATACTA+AGG - chr7_3:31285339-31285358 Msa1100870:three_prime_UTR 35.0%
TGAAGATGAAGACGTTGATA+TGG - chr7_3:31285534-31285553 Msa1100870:three_prime_UTR 35.0%
GGATTATTCAGTGTCGTATT+TGG - chr7_3:31285704-31285723 Msa1100870:three_prime_UTR 35.0%
ATATTACGACTGAGGATTCA+CGG + chr7_3:31286039-31286058 None:intergenic 35.0%
ATTGTTGAATCTGGTGTTTG+TGG - chr7_3:31286073-31286092 Msa1100870:three_prime_UTR 35.0%
TTGTGATCTCTGATGTTATC+AGG - chr7_3:31286337-31286356 Msa1100870:three_prime_UTR 35.0%
GGCAGATTGTTCAGAATATA+AGG - chr7_3:31286435-31286454 Msa1100870:intron 35.0%
TGCACAGATTAGGATTCTTA+AGG - chr7_3:31286469-31286488 Msa1100870:intron 35.0%
TCCTGAATCAATGTTGTCAA+TGG - chr7_3:31286831-31286850 Msa1100870:three_prime_UTR 35.0%
TGAATCAATGTTGTCAATGG+CGG - chr7_3:31286834-31286853 Msa1100870:three_prime_UTR 35.0%
TAAATCCAGATCACGGAAAA+TGG + chr7_3:31286909-31286928 None:intergenic 35.0%
! CTGGATTTACAACATTTTCC+TGG - chr7_3:31286920-31286939 Msa1100870:three_prime_UTR 35.0%
! ACATTTTCCTGGAGAGTTTA+TGG - chr7_3:31286931-31286950 Msa1100870:three_prime_UTR 35.0%
!! GTTGTTTTCATAAGTTGTCC+TGG - chr7_3:31286984-31287003 Msa1100870:three_prime_UTR 35.0%
CGTATTAAATAGCATCCACA+TGG + chr7_3:31287063-31287082 None:intergenic 35.0%
!!! CATTTTTTCCTGGAGAGTTA+TGG - chr7_3:31287165-31287184 Msa1100870:three_prime_UTR 35.0%
ACGAAAACAACTTACTGTTC+GGG + chr7_3:31287238-31287257 None:intergenic 35.0%
CTTCATTTGTGAAACTGTTC+AGG + chr7_3:31287268-31287287 None:intergenic 35.0%
! TGAGATTGCTGTTGTGAAAA+AGG - chr7_3:31287543-31287562 Msa1100870:intron 35.0%
TAGCAGTTGGACAAACAAAT+CGG + chr7_3:31287813-31287832 None:intergenic 35.0%
!! ATTGGAGGTGTTATAGGTAA+GGG - chr7_3:31287835-31287854 Msa1100870:intron 35.0%
AATCAAATTAGGCAGGATTC+TGG - chr7_3:31287871-31287890 Msa1100870:intron 35.0%
ATCAAATTAGGCAGGATTCT+GGG - chr7_3:31287872-31287891 Msa1100870:intron 35.0%
TGACTGCTTAATAGCCATTT+CGG - chr7_3:31287933-31287952 Msa1100870:intron 35.0%
GGGCATAAGAAATGATTGAA+TGG - chr7_3:31288019-31288038 Msa1100870:intron 35.0%
TGTGTTTATGCAGTTCTTTG+AGG - chr7_3:31288074-31288093 Msa1100870:intron 35.0%
GAGAAAGTTGAAAGAGATTC+TGG - chr7_3:31288150-31288169 Msa1100870:CDS 35.0%
! ATTGGTTGCCTTATTGGTAA+AGG - chr7_3:31288216-31288235 Msa1100870:CDS 35.0%
TTGATCCTCCTTTACCAATA+AGG + chr7_3:31288227-31288246 None:intergenic 35.0%
CAATCATTACTGAGATGAGA+AGG - chr7_3:31288244-31288263 Msa1100870:CDS 35.0%
TGCAACTGAAGATGATGAAA+TGG - chr7_3:31288317-31288336 Msa1100870:CDS 35.0%
!!! TGCTTGAGTGATGTCTTTTT+TGG - chr7_3:31288365-31288384 Msa1100870:intron 35.0%
!!! GCTTGAGTGATGTCTTTTTT+GGG - chr7_3:31288366-31288385 Msa1100870:intron 35.0%
! CTCAATGCTTTTAGATTTCG+GGG - chr7_3:31288440-31288459 Msa1100870:intron 35.0%
! TCAATGCTTTTAGATTTCGG+GGG - chr7_3:31288441-31288460 Msa1100870:intron 35.0%
TTCAACTATGAAGGTAGAGA+TGG - chr7_3:31288604-31288623 Msa1100870:CDS 35.0%
TAACTTCCATAAGCTCCATA+AGG + chr7_3:31288856-31288875 None:intergenic 35.0%
AGCTTATGGAAGTTATGCTA+CGG - chr7_3:31288861-31288880 Msa1100870:intron 35.0%
AACCATGGTTACTAAAACCT+TGG - chr7_3:31289116-31289135 Msa1100870:CDS 35.0%
ATGGTTACTAAAACCTTGGT+GGG - chr7_3:31289120-31289139 Msa1100870:CDS 35.0%
CAAAATTCTACATGGTACAC+TGG + chr7_3:31289258-31289277 None:intergenic 35.0%
TTCAATAGTCTCCACATGTT+TGG + chr7_3:31289471-31289490 None:intergenic 35.0%
GAAGTAAGGTAAAATGGACA+TGG + chr7_3:31289499-31289518 None:intergenic 35.0%
GCTTAGGAAGTAAGGTAAAA+TGG + chr7_3:31289505-31289524 None:intergenic 35.0%
AGATAGTACAGGTATACAAC+TGG + chr7_3:31289636-31289655 None:intergenic 35.0%
CGACAAAACAAAGATAGTAC+AGG + chr7_3:31289647-31289666 None:intergenic 35.0%
!!! TTTGTTTTGTCGTGTTTTCC+TGG - chr7_3:31289655-31289674 Msa1100870:intron 35.0%
ATTTAACGCACAAGACTGTA+AGG + chr7_3:31289754-31289773 None:intergenic 35.0%
!! GAATGGACTGAATACAAGAT+TGG - chr7_3:31289931-31289950 Msa1100870:intron 35.0%
!! TGAATACAAGATTGGTTCGT+TGG - chr7_3:31289939-31289958 Msa1100870:intron 35.0%
!! TCGTTGGTGTTTAGTTTGAA+TGG - chr7_3:31289955-31289974 Msa1100870:intron 35.0%
!! CGTTGGTGTTTAGTTTGAAT+GGG - chr7_3:31289956-31289975 Msa1100870:intron 35.0%
!! CAGAAATTGTTTGGGTTGTT+TGG + chr7_3:31290089-31290108 None:intergenic 35.0%
CCGTTAGAATCTATGGATAA+TGG - chr7_3:31290144-31290163 Msa1100870:intron 35.0%
! GCTATTTAAAACAACTGCTC+TGG + chr7_3:31290238-31290257 None:intergenic 35.0%
! GCTTTAAATAGCAGCGATAT+CGG - chr7_3:31290357-31290376 Msa1100870:CDS 35.0%
AATGAAACTAAACACCGAAC+TGG - chr7_3:31290588-31290607 Msa1100870:intron 35.0%
!!! GTTTTTGAGTTCTACCTTTG+AGG - chr7_3:31290676-31290695 Msa1100870:intron 35.0%
CATGTCACATCATAAACTCA+GGG + chr7_3:31291011-31291030 None:intergenic 35.0%
ACATGTCACATCATAAACTC+AGG + chr7_3:31291012-31291031 None:intergenic 35.0%
ATTAAATGAACTAGCCCTAG+AGG + chr7_3:31291112-31291131 None:intergenic 35.0%
ATTGATCAATAGGAAAGGCT+AGG - chr7_3:31291237-31291256 Msa1100870:intron 35.0%
GTTAGTCGTATAAGTACAAG+AGG - chr7_3:31291395-31291414 Msa1100870:CDS 35.0%
CAAGACTAATATCCAACAGT+TGG + chr7_3:31291431-31291450 None:intergenic 35.0%
!! TTGCTCTATGTTTAGGTTGT+TGG - chr7_3:31291448-31291467 Msa1100870:CDS 35.0%
TAATCCAAGGAATCTCAAAG+TGG + chr7_3:31291500-31291519 None:intergenic 35.0%
!! CTTTGAGATTCCTTGGATTA+TGG - chr7_3:31291500-31291519 Msa1100870:CDS 35.0%
TGAACAAGTTCCATAATCCA+AGG + chr7_3:31291513-31291532 None:intergenic 35.0%
CAATGTTCATTGAATGCAGT+TGG - chr7_3:31291606-31291625 Msa1100870:CDS 35.0%
GAATGAGACAGGTAATCTAT+TGG - chr7_3:31291639-31291658 Msa1100870:CDS 35.0%
GACAGGTAATCTATTGGATT+AGG - chr7_3:31291645-31291664 Msa1100870:CDS 35.0%
TTCTCACAATTCACAATGGC+TGG - chr7_3:31285109-31285128 Msa1100870:three_prime_UTR 40.0%
ACTAAGGCGAAGATTCGAAT+CGG - chr7_3:31285355-31285374 Msa1100870:three_prime_UTR 40.0%
! TTGTGATGAGCGTGTTGTTA+CGG - chr7_3:31285393-31285412 Msa1100870:three_prime_UTR 40.0%
TGAGTTTATGTGTCCTGCTA+TGG - chr7_3:31285459-31285478 Msa1100870:three_prime_UTR 40.0%
TGAAGACGTTGATATGGAGA+AGG - chr7_3:31285540-31285559 Msa1100870:three_prime_UTR 40.0%
GGATTATTGTCTGTGTGATG+AGG - chr7_3:31285753-31285772 Msa1100870:three_prime_UTR 40.0%
TGATGTTGATATGTCGATCG+TGG - chr7_3:31285780-31285799 Msa1100870:three_prime_UTR 40.0%
!! TGAATCAGTGCTGACGTATT+TGG - chr7_3:31285913-31285932 Msa1100870:three_prime_UTR 40.0%
ATCAGTGTTTGTGTCGTGTT+TGG - chr7_3:31286004-31286023 Msa1100870:three_prime_UTR 40.0%
CGGTAATTCATACCACACTT+CGG - chr7_3:31286096-31286115 Msa1100870:three_prime_UTR 40.0%
TTATAATAGTGGCCGAAGTG+TGG + chr7_3:31286111-31286130 None:intergenic 40.0%
TGATCTCTGATGTTATCAGG+TGG - chr7_3:31286340-31286359 Msa1100870:three_prime_UTR 40.0%
ATCAGATTGGGTGTGTGATT+GGG - chr7_3:31286405-31286424 Msa1100870:three_prime_UTR 40.0%
CAGAATATAAGGAGTGAGAC+CGG - chr7_3:31286446-31286465 Msa1100870:intron 40.0%
AAGAATCCTAATCTGTGCAC+CGG + chr7_3:31286468-31286487 None:intergenic 40.0%
! GAATTCTGATGAGCTTGTTC+AGG - chr7_3:31286517-31286536 Msa1100870:intron 40.0%
!! GCCATTGACAACATTGATTC+AGG + chr7_3:31286835-31286854 None:intergenic 40.0%
CTTACTTCCATAAACTCTCC+AGG + chr7_3:31286941-31286960 None:intergenic 40.0%
!! TACGAAGTGTTGTCAAACAG+TGG - chr7_3:31287079-31287098 Msa1100870:three_prime_UTR 40.0%
! AAACCACCATTTTCCATGAG+TGG - chr7_3:31287108-31287127 Msa1100870:three_prime_UTR 40.0%
GTTCAACCACTCATGGAAAA+TGG + chr7_3:31287117-31287136 None:intergenic 40.0%
!! GTTGAACAAACCGCCATTTT+GGG - chr7_3:31287130-31287149 Msa1100870:three_prime_UTR 40.0%
GTTGTCAATCTCACCCAAAA+TGG + chr7_3:31287146-31287165 None:intergenic 40.0%
ACTTACTTCCATAACTCTCC+AGG + chr7_3:31287176-31287195 None:intergenic 40.0%
TCGGATGCAACAATAACAGA+TGG + chr7_3:31287470-31287489 None:intergenic 40.0%
! TGTGAAAAAGGCTCTGATTC+AGG - chr7_3:31287555-31287574 Msa1100870:intron 40.0%
GCAAATGTTGAGTACGTGAA+GGG + chr7_3:31287603-31287622 None:intergenic 40.0%
AGCAAATGTTGAGTACGTGA+AGG + chr7_3:31287604-31287623 None:intergenic 40.0%
AATCGGACTGAAAACTCCAT+CGG + chr7_3:31287796-31287815 None:intergenic 40.0%
GTTTGTCCAACTGCTAACAT+TGG - chr7_3:31287817-31287836 Msa1100870:intron 40.0%
!! GCTAACATTGGAGGTGTTAT+AGG - chr7_3:31287829-31287848 Msa1100870:intron 40.0%
!! CATTGGAGGTGTTATAGGTA+AGG - chr7_3:31287834-31287853 Msa1100870:intron 40.0%
TCAAATTAGGCAGGATTCTG+GGG - chr7_3:31287873-31287892 Msa1100870:intron 40.0%
TTTCAACTTTCTCACTGCAC+CGG + chr7_3:31288143-31288162 None:intergenic 40.0%
GTATTCTCTCTTTCACTAGC+CGG - chr7_3:31288172-31288191 Msa1100870:CDS 40.0%
TCTCGAATTGGTTGCCTTAT+TGG - chr7_3:31288210-31288229 Msa1100870:CDS 40.0%
TAACATCCGCATCCTATCTA+AGG - chr7_3:31288278-31288297 Msa1100870:CDS 40.0%
TGAAGATGATGAAATGGTGC+AGG - chr7_3:31288323-31288342 Msa1100870:CDS 40.0%
! AAAAAGATTTGCTCTCAGCC+GGG + chr7_3:31288506-31288525 None:intergenic 40.0%
! CAAAAAGATTTGCTCTCAGC+CGG + chr7_3:31288507-31288526 None:intergenic 40.0%
CCTTCATAGTTGAAACCATC+TGG + chr7_3:31288598-31288617 None:intergenic 40.0%
CCAGATGGTTTCAACTATGA+AGG - chr7_3:31288595-31288614 Msa1100870:CDS 40.0%
GGTGGCTATTCTTATTCTGA+TGG - chr7_3:31288643-31288662 Msa1100870:CDS 40.0%
TCTTATTCTGATGGCTATGG+AGG - chr7_3:31288652-31288671 Msa1100870:CDS 40.0%
TGGAAACTATGGAAGTTCAC+AGG - chr7_3:31288705-31288724 Msa1100870:CDS 40.0%
ATGGAAGTTATGCTACGGAA+CGG - chr7_3:31288866-31288885 Msa1100870:intron 40.0%
GGACAATCTATCAGACAATC+TGG + chr7_3:31289063-31289082 None:intergenic 40.0%
!! CACCAAGGTTTTAGTAACCA+TGG + chr7_3:31289121-31289140 None:intergenic 40.0%
CATGGTTACTAAAACCTTGG+TGG - chr7_3:31289119-31289138 Msa1100870:CDS 40.0%
GAAGCTAAAATCTACCTGCA+GGG + chr7_3:31289147-31289166 None:intergenic 40.0%
ATAACTCAGCTGTTTGGATG+GGG + chr7_3:31289314-31289333 None:intergenic 40.0%
CATAACTCAGCTGTTTGGAT+GGG + chr7_3:31289315-31289334 None:intergenic 40.0%
ACATAACTCAGCTGTTTGGA+TGG + chr7_3:31289316-31289335 None:intergenic 40.0%
CTTCACATAACTCAGCTGTT+TGG + chr7_3:31289320-31289339 None:intergenic 40.0%
TTCATCTCGTCTTCCAGTTT+AGG + chr7_3:31289358-31289377 None:intergenic 40.0%
CCATGAATTTGTCAGTCACT+GGG + chr7_3:31289421-31289440 None:intergenic 40.0%
AACCTTGATGCCTCTATCTA+GGG - chr7_3:31289443-31289462 Msa1100870:intron 40.0%
TACAGGTATACAACTGGCAA+AGG + chr7_3:31289630-31289649 None:intergenic 40.0%
GCAAGTAACTATGAACTACC+AGG + chr7_3:31289676-31289695 None:intergenic 40.0%
GCATCTGACCACTATCTTAT+AGG - chr7_3:31289843-31289862 Msa1100870:intron 40.0%
CATTCAGCTCATATAACCAG+AGG + chr7_3:31289916-31289935 None:intergenic 40.0%
CTCTGGTTATATGAGCTGAA+TGG - chr7_3:31289914-31289933 Msa1100870:intron 40.0%
!! TTAGTTTGAATGGGCTAGTC+TGG - chr7_3:31289965-31289984 Msa1100870:intron 40.0%
! GCTATTTAAAGCAACTGCTC+TGG + chr7_3:31290349-31290368 None:intergenic 40.0%
CTCTACACAACAATGCTGTA+AGG + chr7_3:31290473-31290492 None:intergenic 40.0%
CTTACAGCATTGTTGTGTAG+AGG - chr7_3:31290471-31290490 Msa1100870:intron 40.0%
TGGATCAGTGTTGTCAATTG+CGG + chr7_3:31290525-31290544 None:intergenic 40.0%
AACTATACACCACACCAGTT+CGG + chr7_3:31290605-31290624 None:intergenic 40.0%
!! CAAGCATATGGATTGGAAGT+TGG + chr7_3:31290653-31290672 None:intergenic 40.0%
GCTTAGCCACATCTAGTTAA+GGG - chr7_3:31290708-31290727 Msa1100870:intron 40.0%
ATGCAACCCTTAACTAGATG+TGG + chr7_3:31290717-31290736 None:intergenic 40.0%
ATCTGTTGTCGATCTACTGT+AGG - chr7_3:31290735-31290754 Msa1100870:intron 40.0%
AAATGGCAACGCTAGCTAAA+TGG + chr7_3:31291054-31291073 None:intergenic 40.0%
TGCATATTGGATTGTCCTCT+AGG - chr7_3:31291094-31291113 Msa1100870:intron 40.0%
GCATATTGGATTGTCCTCTA+GGG - chr7_3:31291095-31291114 Msa1100870:intron 40.0%
!! CAGAATGGTGCTGTTTAACA+TGG + chr7_3:31291337-31291356 None:intergenic 40.0%
ACGTGTTCAGAAGACAGATA+AGG + chr7_3:31291377-31291396 None:intergenic 40.0%
AATGAACATTGCAGACCAAG+GGG + chr7_3:31291597-31291616 None:intergenic 40.0%
CAATGAACATTGCAGACCAA+GGG + chr7_3:31291598-31291617 None:intergenic 40.0%
TCAATGAACATTGCAGACCA+AGG + chr7_3:31291599-31291618 None:intergenic 40.0%
GAATGCAGTTGGATTTCTTC+AGG - chr7_3:31291617-31291636 Msa1100870:CDS 40.0%
GATTTCTTCAGGAATGAGAC+AGG - chr7_3:31291628-31291647 Msa1100870:CDS 40.0%
GCTGGTCAAAGAACATCCTA+CGG - chr7_3:31285127-31285146 Msa1100870:three_prime_UTR 45.0%
ATCAACGCTGTTGTGTGAGT+GGG + chr7_3:31285164-31285183 None:intergenic 45.0%
!! TTTCGTCGGTGTTAGGGTTA+CGG + chr7_3:31285210-31285229 None:intergenic 45.0%
GTGAAATGTGTCTCTTGGAG+TGG + chr7_3:31285233-31285252 None:intergenic 45.0%
! AGGGCAAAGGTAACGGTAAA+CGG + chr7_3:31285272-31285291 None:intergenic 45.0%
CTTTGCCCTGTTCGCAAAAT+CGG - chr7_3:31285283-31285302 Msa1100870:three_prime_UTR 45.0%
! TGCTTCCGATTTTGCGAACA+GGG + chr7_3:31285291-31285310 None:intergenic 45.0%
! ATGCTTCCGATTTTGCGAAC+AGG + chr7_3:31285292-31285311 None:intergenic 45.0%
!! CGCAAAATCGGAAGCATCAT+TGG - chr7_3:31285295-31285314 Msa1100870:three_prime_UTR 45.0%
GCTTGTCAGGATTCATCAGA+AGG - chr7_3:31285486-31285505 Msa1100870:three_prime_UTR 45.0%
TCATCAGAAGGTGATTGCTG+AGG - chr7_3:31285498-31285517 Msa1100870:three_prime_UTR 45.0%
CTCAATGTCTGGGTCATGTT+TGG - chr7_3:31285614-31285633 Msa1100870:three_prime_UTR 45.0%
! ATGTTTGGTTTCCGTGTCTG+TGG - chr7_3:31285629-31285648 Msa1100870:three_prime_UTR 45.0%
TTGAAGCACGAACACAGACA+CGG + chr7_3:31285663-31285682 None:intergenic 45.0%
GTTGAATCTGGTGTTTGTGG+CGG - chr7_3:31286076-31286095 Msa1100870:three_prime_UTR 45.0%
CTCTGATGTTATCAGGTGGA+TGG - chr7_3:31286344-31286363 Msa1100870:three_prime_UTR 45.0%
TGATGTTATCAGGTGGATGG+AGG - chr7_3:31286347-31286366 Msa1100870:three_prime_UTR 45.0%
GATGTTATCAGGTGGATGGA+GGG - chr7_3:31286348-31286367 Msa1100870:three_prime_UTR 45.0%
ATGTTATCAGGTGGATGGAG+GGG - chr7_3:31286349-31286368 Msa1100870:three_prime_UTR 45.0%
TTGTGGCGTCTGATCAGATT+GGG - chr7_3:31286393-31286412 Msa1100870:three_prime_UTR 45.0%
GATCAGATTGGGTGTGTGAT+TGG - chr7_3:31286404-31286423 Msa1100870:three_prime_UTR 45.0%
ATTGGGTGTGTGATTGGGAA+AGG - chr7_3:31286410-31286429 Msa1100870:three_prime_UTR 45.0%
TCAGAATTCAGCGCACAAAG+TGG + chr7_3:31286506-31286525 None:intergenic 45.0%
!!! AACTGCCATTTTCCGTGATC+TGG - chr7_3:31286901-31286920 Msa1100870:three_prime_UTR 45.0%
!! TTTGAACGGATTGTCCCATG+TGG - chr7_3:31287045-31287064 Msa1100870:three_prime_UTR 45.0%
CAACCACTCATGGAAAATGG+TGG + chr7_3:31287114-31287133 None:intergenic 45.0%
! GGTTGAACAAACCGCCATTT+TGG - chr7_3:31287129-31287148 Msa1100870:three_prime_UTR 45.0%
GTCAATCTCACCCAAAATGG+CGG + chr7_3:31287143-31287162 None:intergenic 45.0%
!! AAAGGCTCTGATTCAGGTTG+CGG - chr7_3:31287561-31287580 Msa1100870:intron 45.0%
TTGCTTACTTCTGCAGTTCC+TGG - chr7_3:31287619-31287638 Msa1100870:intron 45.0%
TGCTTACTTCTGCAGTTCCT+GGG - chr7_3:31287620-31287639 Msa1100870:intron 45.0%
ATCGGAGCCATTCCCATAAT+TGG + chr7_3:31287691-31287710 None:intergenic 45.0%
ATTATGGGAATGGCTCCGAT+TGG - chr7_3:31287691-31287710 Msa1100870:exon 45.0%
! GGTGGTTATGGAGGGTATAA+AGG - chr7_3:31287715-31287734 Msa1100870:CDS 45.0%
! GGAGGGTATAAAGGTGATGT+TGG - chr7_3:31287724-31287743 Msa1100870:CDS 45.0%
GTGATGTTGGAGACTATCCA+CGG - chr7_3:31287737-31287756 Msa1100870:CDS 45.0%
TGTCCAACTGCTAACATTGG+AGG - chr7_3:31287820-31287839 Msa1100870:intron 45.0%
ACACCTCCAATGTTAGCAGT+TGG + chr7_3:31287826-31287845 None:intergenic 45.0%
!! GGATTCTGGGGCAAATATCA+AGG - chr7_3:31287885-31287904 Msa1100870:intron 45.0%
!! GTTGATAGTTCGGCAACTGA+AGG - chr7_3:31287907-31287926 Msa1100870:intron 45.0%
CACAGCTGCTTCAATTGTTG+CGG + chr7_3:31288109-31288128 None:intergenic 45.0%
TTCAACTTTCTCACTGCACC+GGG + chr7_3:31288142-31288161 None:intergenic 45.0%
! GGTTGCCTTATTGGTAAAGG+AGG - chr7_3:31288219-31288238 Msa1100870:CDS 45.0%
GATCCTCCTTAGATAGGATG+CGG + chr7_3:31288287-31288306 None:intergenic 45.0%
TAGGGAGATCCTCCTTAGAT+AGG + chr7_3:31288293-31288312 None:intergenic 45.0%
ATGATGAAATGGTGCAGGTG+AGG - chr7_3:31288328-31288347 Msa1100870:CDS 45.0%
CTCTTGTGCAAGTACTTACC+CGG - chr7_3:31288485-31288504 Msa1100870:intron 45.0%
!! GGAAGATATGCAAGTACTGG+TGG + chr7_3:31288559-31288578 None:intergenic 45.0%
GCAGGAAGATATGCAAGTAC+TGG + chr7_3:31288562-31288581 None:intergenic 45.0%
TTGAAACCATCTGGTCCTTC+TGG + chr7_3:31288589-31288608 None:intergenic 45.0%
! GGCTCAAGTGATTTTGCATC+TGG - chr7_3:31288673-31288692 Msa1100870:CDS 45.0%
! AGTGATTTTGCATCTGGCGA+CGG - chr7_3:31288679-31288698 Msa1100870:CDS 45.0%
CTCATCCGCACTTAAAATCC+TGG + chr7_3:31288756-31288775 None:intergenic 45.0%
TTGTTTCATATGCGGCAGCT+TGG - chr7_3:31288820-31288839 Msa1100870:intron 45.0%
AGATTGTCCGACAGATTGTC+TGG - chr7_3:31289074-31289093 Msa1100870:CDS 45.0%
TACACCACCAGACAATCTGT+CGG + chr7_3:31289084-31289103 None:intergenic 45.0%
! GATTGTCTGGTGGTGTATCT+CGG - chr7_3:31289087-31289106 Msa1100870:CDS 45.0%
GGAAGCTAAAATCTACCTGC+AGG + chr7_3:31289148-31289167 None:intergenic 45.0%
TTCTACATGGTACACTGGTC+AGG + chr7_3:31289253-31289272 None:intergenic 45.0%
AGTTTAGGCAGTAGGCTTCA+GGG + chr7_3:31289343-31289362 None:intergenic 45.0%
GCAGTGAGTTTGTCAAACCA+TGG + chr7_3:31289381-31289400 None:intergenic 45.0%
ATTTGTCAGTCACTGGGTAG+AGG + chr7_3:31289415-31289434 None:intergenic 45.0%
CCCAGTGACTGACAAATTCA+TGG - chr7_3:31289418-31289437 Msa1100870:intron 45.0%
GCCATGAATTTGTCAGTCAC+TGG + chr7_3:31289422-31289441 None:intergenic 45.0%
!! CTAGATAGAGGCATCAAGGT+TGG + chr7_3:31289444-31289463 None:intergenic 45.0%
CAACCTTGATGCCTCTATCT+AGG - chr7_3:31289442-31289461 Msa1100870:intron 45.0%
ACCTTGATGCCTCTATCTAG+GGG - chr7_3:31289444-31289463 Msa1100870:intron 45.0%
ATGTTTGGTCCCCTAGATAG+AGG + chr7_3:31289456-31289475 None:intergenic 45.0%
TATCTAGGGGACCAAACATG+TGG - chr7_3:31289457-31289476 Msa1100870:intron 45.0%
GTTCGCAAGCTTAGGAAGTA+AGG + chr7_3:31289513-31289532 None:intergenic 45.0%
GGCAAAGGAACATATCCACA+TGG + chr7_3:31289615-31289634 None:intergenic 45.0%
ACTGCAATACAGACCACACA+AGG + chr7_3:31289785-31289804 None:intergenic 45.0%
! ACAAGAGTGATTTGTCCGCT+AGG + chr7_3:31290399-31290418 None:intergenic 45.0%
!! ATTGCGGATAGCGGAAATAG+CGG + chr7_3:31290509-31290528 None:intergenic 45.0%
GTGTTGTCAATTGCGGATAG+CGG + chr7_3:31290518-31290537 None:intergenic 45.0%
ACAACACTGATCCAGAGCTA+AGG - chr7_3:31290531-31290550 Msa1100870:intron 45.0%
AACTAAACACCGAACTGGTG+TGG - chr7_3:31290593-31290612 Msa1100870:intron 45.0%
!! TCTACCTTTGAGGTCTAGCA+CGG - chr7_3:31290686-31290705 Msa1100870:intron 45.0%
GGCTTAGCCACATCTAGTTA+AGG - chr7_3:31290707-31290726 Msa1100870:intron 45.0%
TAAGAGATTGAGGGCCTGTT+TGG - chr7_3:31290777-31290796 Msa1100870:intron 45.0%
TCATAAACTCAGGGTCCGTT+TGG + chr7_3:31291002-31291021 None:intergenic 45.0%
CATCATTCGATCACTGGGAA+AGG - chr7_3:31291200-31291219 Msa1100870:intron 45.0%
!! CATGCCACTTTGAGATTCCT+TGG - chr7_3:31291493-31291512 Msa1100870:CDS 45.0%
!!! AATAAAAAAAAATACTTTTT+AGG + chr7_3:31286226-31286245 None:intergenic 5.0%
!!! TATTATTTATAAATTTGTTA+AGG + chr7_3:31290921-31290940 None:intergenic 5.0%
CATCAACGCTGTTGTGTGAG+TGG + chr7_3:31285165-31285184 None:intergenic 50.0%
GTTAGGGTTACGGCGTTTGT+TGG + chr7_3:31285200-31285219 None:intergenic 50.0%
!! GAGTGGTTTCGTCGGTGTTA+GGG + chr7_3:31285216-31285235 None:intergenic 50.0%
GTCTCTTGGAGTGGTTTCGT+CGG + chr7_3:31285224-31285243 None:intergenic 50.0%
!! ACGGTAAACGGTGTCGTCTT+GGG + chr7_3:31285260-31285279 None:intergenic 50.0%
!! AACGGTAAACGGTGTCGTCT+TGG + chr7_3:31285261-31285280 None:intergenic 50.0%
TGCGAACAGGGCAAAGGTAA+CGG + chr7_3:31285279-31285298 None:intergenic 50.0%
! CGATTTTGCGAACAGGGCAA+AGG + chr7_3:31285285-31285304 None:intergenic 50.0%
CGAATCGGTGAAACTGTTCC+TGG - chr7_3:31285370-31285389 Msa1100870:three_prime_UTR 50.0%
ACAACACGCTCATCACAACC+AGG + chr7_3:31285391-31285410 None:intergenic 50.0%
GTGATTGCTGAGGATTTGCG+TGG - chr7_3:31285508-31285527 Msa1100870:three_prime_UTR 50.0%
ATTGCTGAGGATTTGCGTGG+TGG - chr7_3:31285511-31285530 Msa1100870:three_prime_UTR 50.0%
TCGCGACGTTTATGTCGAGT+TGG - chr7_3:31285853-31285872 Msa1100870:three_prime_UTR 50.0%
CGCGACGTTTATGTCGAGTT+GGG - chr7_3:31285854-31285873 Msa1100870:three_prime_UTR 50.0%
CTTGTGGCGTCTGATCAGAT+TGG - chr7_3:31286392-31286411 Msa1100870:three_prime_UTR 50.0%
GGTGTGTGATTGGGAAAGGT+GGG - chr7_3:31286414-31286433 Msa1100870:three_prime_UTR 50.0%
GTTGTCAATGGCGGCTATTG+CGG - chr7_3:31286843-31286862 Msa1100870:three_prime_UTR 50.0%
GCTTGACAACACTAAGCTCC+AGG + chr7_3:31287005-31287024 None:intergenic 50.0%
! GCGGTTTGTTCAACCACTCA+TGG + chr7_3:31287124-31287143 None:intergenic 50.0%
TCGCTGAATCTGCAGATCTC+TGG - chr7_3:31287520-31287539 Msa1100870:intron 50.0%
GCTTACTTCTGCAGTTCCTG+GGG - chr7_3:31287621-31287640 Msa1100870:intron 50.0%
!! GGTTCAATGGTGGGTTCTCA+TGG - chr7_3:31287658-31287677 Msa1100870:intron 50.0%
!! TCAATGGTGGGTTCTCATGG+TGG - chr7_3:31287661-31287680 Msa1100870:intron 50.0%
!! CAATGGTGGGTTCTCATGGT+GGG - chr7_3:31287662-31287681 Msa1100870:intron 50.0%
!! AATGGTGGGTTCTCATGGTG+GGG - chr7_3:31287663-31287682 Msa1100870:intron 50.0%
! TCATGGTGGGGCTCCAATTA+TGG - chr7_3:31287675-31287694 Msa1100870:intron 50.0%
! CATGGTGGGGCTCCAATTAT+GGG - chr7_3:31287676-31287695 Msa1100870:intron 50.0%
TGGGGCTCCAATTATGGGAA+TGG - chr7_3:31287681-31287700 Msa1100870:intron 50.0%
CCTCCATAACCACCACCAAT+CGG + chr7_3:31287709-31287728 None:intergenic 50.0%
!! CGATTGGTGGTGGTTATGGA+GGG - chr7_3:31287707-31287726 Msa1100870:CDS 50.0%
CTATCCACGGTCCATGTATC+CGG - chr7_3:31287750-31287769 Msa1100870:CDS 50.0%
TATCCACGGTCCATGTATCC+GGG - chr7_3:31287751-31287770 Msa1100870:CDS 50.0%
AAGGGATGAAGGTTCTCCGA+TGG - chr7_3:31287777-31287796 Msa1100870:intron 50.0%
!! GGAGGTGTTATAGGTAAGGG+CGG - chr7_3:31287838-31287857 Msa1100870:intron 50.0%
AATAGCCATTTCGGCGAGAG+AGG - chr7_3:31287942-31287961 Msa1100870:CDS 50.0%
TTCTACCTCTCTCGCCGAAA+TGG + chr7_3:31287950-31287969 None:intergenic 50.0%
TCAACTTTCTCACTGCACCG+GGG + chr7_3:31288141-31288160 None:intergenic 50.0%
CTCTTTCACTAGCCGGTTAC+TGG - chr7_3:31288179-31288198 Msa1100870:CDS 50.0%
GAGAGCTTGACACCAGTAAC+CGG + chr7_3:31288194-31288213 None:intergenic 50.0%
! CTGGTGTCAAGCTCTCGAAT+TGG - chr7_3:31288198-31288217 Msa1100870:CDS 50.0%
CATCCGCATCCTATCTAAGG+AGG - chr7_3:31288281-31288300 Msa1100870:CDS 50.0%
GGGGGAACTAGATATTGCCA+AGG - chr7_3:31288459-31288478 Msa1100870:intron 50.0%
!! TACTTGCACAAGAGCGTCCT+TGG + chr7_3:31288479-31288498 None:intergenic 50.0%
TATCTTCCTGCTTCGCCAGA+AGG - chr7_3:31288571-31288590 Msa1100870:CDS 50.0%
GGTAGAGATGGAAGACGACA+TGG - chr7_3:31288616-31288635 Msa1100870:CDS 50.0%
TTTGCATCTGGCGACGGTTA+TGG - chr7_3:31288685-31288704 Msa1100870:CDS 50.0%
GGCGACGGTTATGGAAACTA+TGG - chr7_3:31288694-31288713 Msa1100870:CDS 50.0%
GGTGGTCCTTATGGAGCTTA+TGG - chr7_3:31288847-31288866 Msa1100870:intron 50.0%
!! ACGGAACGGACTAGTACTTC+TGG - chr7_3:31288880-31288899 Msa1100870:CDS 50.0%
!! CGGAACGGACTAGTACTTCT+GGG - chr7_3:31288881-31288900 Msa1100870:CDS 50.0%
TTGTCCGACAGATTGTCTGG+TGG - chr7_3:31289077-31289096 Msa1100870:CDS 50.0%
GTATCTCGGAGGAGAAACCA+TGG - chr7_3:31289101-31289120 Msa1100870:CDS 50.0%
GGGAAGGGAAAGGCAACAAA+GGG + chr7_3:31289294-31289313 None:intergenic 50.0%
TGTTTGGATGGGGAAGGGAA+AGG + chr7_3:31289304-31289323 None:intergenic 50.0%
TCAGCTGTTTGGATGGGGAA+GGG + chr7_3:31289309-31289328 None:intergenic 50.0%
CAGTTTAGGCAGTAGGCTTC+AGG + chr7_3:31289344-31289363 None:intergenic 50.0%
CTGAAGCCTACTGCCTAAAC+TGG - chr7_3:31289342-31289361 Msa1100870:intron 50.0%
CGTCTTCCAGTTTAGGCAGT+AGG + chr7_3:31289351-31289370 None:intergenic 50.0%
CTGGAAGACGAGATGAACCA+TGG - chr7_3:31289361-31289380 Msa1100870:intron 50.0%
!! TCCCCTAGATAGAGGCATCA+AGG + chr7_3:31289448-31289467 None:intergenic 50.0%
GAGCACATGTTCGCAAGCTT+AGG + chr7_3:31289521-31289540 None:intergenic 50.0%
! TTTTTCCAGTTCGGCTCCTC+TGG - chr7_3:31289897-31289916 Msa1100870:intron 50.0%
TATAACCAGAGGAGCCGAAC+TGG + chr7_3:31289905-31289924 None:intergenic 50.0%
GCAATAGCGCTATTGCCTAG+CGG - chr7_3:31290270-31290289 Msa1100870:intron 50.0%
ACAAGAGCGATTTGTCCGCT+AGG + chr7_3:31290288-31290307 None:intergenic 50.0%
GCTATAGCGCTATTGCCTAG+CGG - chr7_3:31290381-31290400 Msa1100870:CDS 50.0%
AACATCATAGCCGTCCAGGA+TGG + chr7_3:31290565-31290584 None:intergenic 50.0%
TCCTGGACGGCTATGATGTT+AGG - chr7_3:31290565-31290584 Msa1100870:intron 50.0%
TCCTAACATCATAGCCGTCC+AGG + chr7_3:31290569-31290588 None:intergenic 50.0%
TAAGCCGTGCTAGACCTCAA+AGG + chr7_3:31290693-31290712 None:intergenic 50.0%
TTCGATCACTGGGAAAGGCT+AGG - chr7_3:31291205-31291224 Msa1100870:intron 50.0%
GGTTATGAGGACCCAACTGT+TGG - chr7_3:31291416-31291435 Msa1100870:CDS 50.0%
!!! CTGTTTTTGTCCTCTCCCCT+TGG - chr7_3:31291579-31291598 Msa1100870:CDS 50.0%
! GTGGGAACGTTTGTTGCCGT+AGG + chr7_3:31285146-31285165 None:intergenic 55.0%
! AGGGTTACGGCGTTTGTTGG+TGG + chr7_3:31285197-31285216 None:intergenic 55.0%
! GGAGTGGTTTCGTCGGTGTT+AGG + chr7_3:31285217-31285236 None:intergenic 55.0%
!! ATCGGAAGCATCATTGGCCG+CGG - chr7_3:31285301-31285320 Msa1100870:three_prime_UTR 55.0%
CTGACAAGCGCATCCATAGC+AGG + chr7_3:31285475-31285494 None:intergenic 55.0%
CTGCTATGGATGCGCTTGTC+AGG - chr7_3:31285473-31285492 Msa1100870:three_prime_UTR 55.0%
TGGTTTCCGTGTCTGTGGTG+TGG - chr7_3:31285634-31285653 Msa1100870:three_prime_UTR 55.0%
CGACTGAGGATTCACGGACA+CGG + chr7_3:31286033-31286052 None:intergenic 55.0%
TCAGGTGGATGGAGGGGATT+TGG - chr7_3:31286355-31286374 Msa1100870:three_prime_UTR 55.0%
! GGATGGAGGGGATTTGGTCA+CGG - chr7_3:31286361-31286380 Msa1100870:three_prime_UTR 55.0%
GGTCACGGCGAAATTGCTTG+TGG - chr7_3:31286376-31286395 Msa1100870:three_prime_UTR 55.0%
GGGTGTGTGATTGGGAAAGG+TGG - chr7_3:31286413-31286432 Msa1100870:three_prime_UTR 55.0%
GTGAGACCGGTGCACAGATT+AGG - chr7_3:31286459-31286478 Msa1100870:intron 55.0%
!! CTCTGATTCAGGTTGCGGCA+CGG - chr7_3:31287566-31287585 Msa1100870:intron 55.0%
ATGGGAATGGCTCCGATTGG+TGG - chr7_3:31287694-31287713 Msa1100870:exon 55.0%
!! GCTCCGATTGGTGGTGGTTA+TGG - chr7_3:31287703-31287722 Msa1100870:exon 55.0%
!! CCGATTGGTGGTGGTTATGG+AGG - chr7_3:31287706-31287725 Msa1100870:CDS 55.0%
GTCCATGTATCCGGGCTCAA+GGG - chr7_3:31287759-31287778 Msa1100870:intron 55.0%
ATCCCTTGAGCCCGGATACA+TGG + chr7_3:31287764-31287783 None:intergenic 55.0%
TATCCGGGCTCAAGGGATGA+AGG - chr7_3:31287766-31287785 Msa1100870:intron 55.0%
GAACCTTCATCCCTTGAGCC+CGG + chr7_3:31287772-31287791 None:intergenic 55.0%
! GGTGTTATAGGTAAGGGCGG+TGG - chr7_3:31287841-31287860 Msa1100870:intron 55.0%
! CAGCTGTGCTTTTGCAACCC+CGG - chr7_3:31288121-31288140 Msa1100870:CDS 55.0%
GATGGAAGACGACATGGACG+TGG - chr7_3:31288622-31288641 Msa1100870:CDS 55.0%
CTTGGTCGAGGTGGTCCTTA+TGG - chr7_3:31288838-31288857 Msa1100870:intron 55.0%
! TGTCTGGTGGTGTATCTCGG+AGG - chr7_3:31289090-31289109 Msa1100870:CDS 55.0%
GGGGAAGGGAAAGGCAACAA+AGG + chr7_3:31289295-31289314 None:intergenic 55.0%
CTCAGCTGTTTGGATGGGGA+AGG + chr7_3:31289310-31289329 None:intergenic 55.0%
TGGCTGTACAGCCTTAGCTC+TGG + chr7_3:31290545-31290564 None:intergenic 55.0%
CTAAGGCTGTACAGCCATCC+TGG - chr7_3:31290548-31290567 Msa1100870:intron 55.0%
ACATTGCAGACCAAGGGGAG+AGG + chr7_3:31291592-31291611 None:intergenic 55.0%
CGGACACCACACCACAGACA+CGG + chr7_3:31285643-31285662 None:intergenic 60.0%
TGCAGTTCCTGGGGTGCATG+CGG - chr7_3:31287630-31287649 Msa1100870:intron 60.0%
GCATGCGGTCGGTGGTTCAA+TGG - chr7_3:31287645-31287664 Msa1100870:intron 60.0%
TGCGGTCGGTGGTTCAATGG+TGG - chr7_3:31287648-31287667 Msa1100870:intron 60.0%
GCGGTCGGTGGTTCAATGGT+GGG - chr7_3:31287649-31287668 Msa1100870:intron 60.0%
GGAATGGCTCCGATTGGTGG+TGG - chr7_3:31287697-31287716 Msa1100870:exon 60.0%
GGTCCATGTATCCGGGCTCA+AGG - chr7_3:31287758-31287777 Msa1100870:intron 60.0%
TCTGGTCCTTCTGGCGAAGC+AGG + chr7_3:31288580-31288599 None:intergenic 60.0%
GCTTCGCCAGAAGGACCAGA+TGG - chr7_3:31288580-31288599 Msa1100870:CDS 60.0%
GGAAGACGACATGGACGTGG+TGG - chr7_3:31288625-31288644 Msa1100870:CDS 60.0%
CATATGCGGCAGCTTGGTCG+AGG - chr7_3:31288826-31288845 Msa1100870:intron 60.0%
! AAACCTTGGTGGGTCCCTGC+AGG - chr7_3:31289130-31289149 Msa1100870:CDS 60.0%
!! CTGGGTAGAGGCGTCAAGGT+GGG + chr7_3:31289403-31289422 None:intergenic 60.0%
!! ACTGGGTAGAGGCGTCAAGG+TGG + chr7_3:31289404-31289423 None:intergenic 60.0%
!! GTCACTGGGTAGAGGCGTCA+AGG + chr7_3:31289407-31289426 None:intergenic 60.0%
GGCTGTACAGCCATCCTGGA+CGG - chr7_3:31290552-31290571 Msa1100870:intron 60.0%
!! GGAAGCATCATTGGCCGCGG+CGG - chr7_3:31285304-31285323 Msa1100870:three_prime_UTR 65.0%
GTTTCACGATCTCGCCGCCG+CGG + chr7_3:31285321-31285340 None:intergenic 65.0%
GTTCCTGGGGTGCATGCGGT+CGG - chr7_3:31287634-31287653 Msa1100870:intron 65.0%
GAGCCCGGATACATGGACCG+TGG + chr7_3:31287757-31287776 None:intergenic 65.0%
ATGCGGCAGCTTGGTCGAGG+TGG - chr7_3:31288829-31288848 Msa1100870:intron 65.0%
CTACCTGCAGGGACCCACCA+AGG + chr7_3:31289136-31289155 None:intergenic 65.0%
CCACCGACCGCATGCACCCC+AGG + chr7_3:31287640-31287659 None:intergenic 75.0%
CCTGGGGTGCATGCGGTCGG+TGG - chr7_3:31287637-31287656 Msa1100870:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 31285038 31291798 31285038 ID=Msa1100870;Name=Msa1100870
chr7_3 mRNA 31285038 31291798 31285038 ID=Msa1100870-mRNA-1;Parent=Msa1100870;Name=Msa1100870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=86|1|1|1|0.75|0.66|9|2384|569
chr7_3 exon 31285038 31286435 31285038 ID=Msa1100870-mRNA-1:exon:6677;Parent=Msa1100870-mRNA-1
chr7_3 exon 31286547 31287511 31286547 ID=Msa1100870-mRNA-1:exon:6676;Parent=Msa1100870-mRNA-1
chr7_3 exon 31287685 31287772 31287685 ID=Msa1100870-mRNA-1:exon:6675;Parent=Msa1100870-mRNA-1
chr7_3 exon 31287934 31287998 31287934 ID=Msa1100870-mRNA-1:exon:6674;Parent=Msa1100870-mRNA-1
chr7_3 exon 31288110 31288382 31288110 ID=Msa1100870-mRNA-1:exon:6673;Parent=Msa1100870-mRNA-1
chr7_3 exon 31288492 31288749 31288492 ID=Msa1100870-mRNA-1:exon:6672;Parent=Msa1100870-mRNA-1
chr7_3 exon 31288873 31289301 31288873 ID=Msa1100870-mRNA-1:exon:6671;Parent=Msa1100870-mRNA-1
chr7_3 exon 31290298 31290477 31290298 ID=Msa1100870-mRNA-1:exon:6670;Parent=Msa1100870-mRNA-1
chr7_3 exon 31291275 31291798 31291275 ID=Msa1100870-mRNA-1:exon:6669;Parent=Msa1100870-mRNA-1
chr7_3 five_prime_UTR 31291713 31291798 31291713 ID=Msa1100870-mRNA-1:five_prime_utr;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31291275 31291712 31291275 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31290298 31290477 31290298 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31288873 31289301 31288873 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31288492 31288749 31288492 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31288110 31288382 31288110 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31287934 31287998 31287934 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 CDS 31287706 31287772 31287706 ID=Msa1100870-mRNA-1:cds;Parent=Msa1100870-mRNA-1
chr7_3 three_prime_UTR 31287685 31287705 31287685 ID=Msa1100870-mRNA-1:three_prime_utr;Parent=Msa1100870-mRNA-1
chr7_3 three_prime_UTR 31286547 31287511 31286547 ID=Msa1100870-mRNA-1:three_prime_utr;Parent=Msa1100870-mRNA-1
chr7_3 three_prime_UTR 31285038 31286435 31285038 ID=Msa1100870-mRNA-1:three_prime_utr;Parent=Msa1100870-mRNA-1
Gene Sequence

>Msa1100870

ATGGCTGGTCAAAGAACATCCTACGGCAACAAACGTTCCCACTCACACAACAGCGTTGATGACAACAGAACCACCAACAAACGCCGTAACCCTAACACCGACGAAACCACTCCAAGAGACACATTTCACATAACCCAAGACGACACCGTTTACCGTTACCTTTGCCCTGTTCGCAAAATCGGAAGCATCATTGGCCGCGGCGGCGAGATCGTGAAACAACTACGTCTTGATACTAAGGCGAAGATTCGAATCGGTGAAACTGTTCCTGGTTGTGATGAGCGTGTTGTTACGGTTTATAGTGTTTCTGATGAATCGAATGATTTTGAAGATTCTGGTGAGTTTATGTGTCCTGCTATGGATGCGCTTGTCAGGATTCATCAGAAGGTGATTGCTGAGGATTTGCGTGGTGGTGAAGATGAAGACGTTGATATGGAGAAGGTGGATGGAGGGGATTTGGTCACGGCGAAATTGCTTGTGGCGTCTGATCAGATTGGGTGTGTGATTGGGAAAGGTGGGCAGATTGTTCAGAATATAAGGAGTGAGACCGGTGCACAGATTAGGATTCTTAAGGATGATCGGCTGCCACTTTGTGCGCTGAATTCTGATGAGCTTGTTCAGATCTCTGGTGAGATTGCTGTTGTGAAAAAGGCTCTGATTCAGGTTGCGGCACGGCTTCATGACAACCCTTCACGTACTCAACATTTGCTTACTTCTGCAGTTCCTGGGGTGCATGCGGTCGGTGGTTCAATGGTGGGTTCTCATGGTGGGGCTCCAATTATGGGAATGGCTCCGATTGGTGGTGGTTATGGAGGGTATAAAGGTGATGTTGGAGACTATCCACGGTCCATGTATCCGGGCTCAAGGGATGAAGGTTCTCCGATGGAGTTTTCAGTCCGATTTGTTTGTCCAACTGCTAACATTGGAGGTGTTATAGGTAAGGGCGGTGGTATAATAAATCAAATTAGGCAGGATTCTGGGGCAAATATCAAGGTTGATAGTTCGGCAACTGAAGGAGATGACTGCTTAATAGCCATTTCGGCGAGAGAGTTCTTTGAGGATTCATTCTCCGCAACAATTGAAGCAGCTGTGCTTTTGCAACCCCGGTGCAGTGAGAAAGTTGAAAGAGATTCTGGTATTCTCTCTTTCACTAGCCGGTTACTGGTGTCAAGCTCTCGAATTGGTTGCCTTATTGGTAAAGGAGGATCAATCATTACTGAGATGAGAAGGCTTACAAAAGCTAACATCCGCATCCTATCTAAGGAGGATCTCCCTAAAATTGCAACTGAAGATGATGAAATGGTGCAGATTTCGGGGGAACTAGATATTGCCAAGGACGCTCTTGTGCAAGTACTTACCCGGCTGAGAGCAAATCTTTTTGATAAGGAGCGTTCTGTCTCATCATTGCTTCCACCAGTACTTGCATATCTTCCTGCTTCGCCAGAAGGACCAGATGGTTTCAACTATGAAGGTAGAGATGGAAGACGACATGGACGTGGTGGCTATTCTTATTCTGATGGCTATGGAGGCTCAAGTGATTTTGCATCTGGCGACGGTTATGGAAACTATGGAAGTTCACAGCTTGGTCGAGGTGGTCCTTATGGAGCTTATGGAAGTTATGCTACGGAACGGACTAGTACTTCTGGATTGTCTGATAGATTGTCCGACAGATTGTCTGGTGGTGTATCTCGGAGGAGAAACCATGGTTACTAA
Protein sequence

>Msa1100870

MAGQRTSYGNKRSHSHNSVDDNRTTNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGGEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVHAVGGSMVGSHGGAPIMGMAPIGGGYGGYKGDVGDYPRSMYPGSRDEGSPMEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISAREFFEDSFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALVQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGPDGFNYEGRDGRRHGRGGYSYSDGYGGSSDFASGDGYGNYGSSQLGRGGPYGAYGSYATERTSTSGLSDRLSDRLSGGVSRRRNHGY*