Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050890 | XP_003621527.1 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050890 | sp|Q93YQ3|PURU1_ARATH | 78.276 | 290 | 63 | 0 | 35 | 324 | 34 | 323 | 1.66e-176 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050890 | G7KR22 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0614400 | Msa1050890 | 0.813408 | 2.599354e-51 | -8.615850e-47 |
| Msa0132180 | Msa1050890 | 0.811295 | 7.520701e-51 | -8.615850e-47 |
| Msa1050890 | Msa1175800 | 0.814746 | 1.316640e-51 | -8.615850e-47 |
| Msa1050890 | Msa1421010 | 0.816762 | 4.678277e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050890 | MtrunA17_Chr7g0220151 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| Msa1050890 | MtrunA17_Chr5g0399371 | 74.342 | 304 | 78 | 0 | 21 | 324 | 46 | 349 | 1.10e-173 | 485 |
| Msa1050890 | MtrunA17_Chr1g0146321 | 25.628 | 199 | 135 | 3 | 126 | 314 | 91 | 286 | 1.09e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050890 | AT5G47435.1 | 78.276 | 290 | 63 | 0 | 35 | 324 | 34 | 323 | 1.69e-177 | 494 |
| Msa1050890 | AT5G47435.2 | 78.276 | 290 | 63 | 0 | 35 | 324 | 34 | 323 | 1.69e-177 | 494 |
| Msa1050890 | AT4G17360.1 | 71.951 | 328 | 85 | 2 | 4 | 324 | 1 | 328 | 7.92e-175 | 488 |
| Msa1050890 | AT4G17360.2 | 67.984 | 253 | 74 | 2 | 4 | 249 | 1 | 253 | 3.75e-123 | 353 |
| Msa1050890 | AT4G17360.3 | 67.580 | 219 | 64 | 2 | 4 | 215 | 1 | 219 | 6.12e-103 | 301 |
| Msa1050890 | AT1G31220.1 | 25.126 | 199 | 135 | 4 | 126 | 313 | 77 | 272 | 1.75e-15 | 75.9 |
Find 97 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCATTTGTTCAATTAT+TGG | 0.177833 | 7_2:+17036562 | None:intergenic |
| GAGGCTGGTGTGAAATTAAT+TGG | 0.276061 | 7_2:-17036625 | Msa1050890:CDS |
| TACAAAGAACTTGATTCTTT+TGG | 0.277405 | 7_2:-17034578 | Msa1050890:three_prime_UTR |
| TTGTTGCAGCTAACATAAAA+TGG | 0.280282 | 7_2:+17034603 | None:intergenic |
| TGTCGTGAGGGTGCCGGCTC+TGG | 0.286577 | 7_2:-17038047 | Msa1050890:CDS |
| TAAAAGAGAAGGGGAGATAT+TGG | 0.293953 | 7_2:-17037441 | Msa1050890:CDS |
| TAAATATAAAATAGCTGTTC+TGG | 0.311791 | 7_2:-17038020 | Msa1050890:CDS |
| TGAATGCCTGGGAAAGCTTT+AGG | 0.320422 | 7_2:+17038083 | None:intergenic |
| GTAGCTCCGTATAAAGTTTC+CGG | 0.323146 | 7_2:+17036848 | None:intergenic |
| TGGATATCACCTGTGTAATT+AGG | 0.333347 | 7_2:-17037652 | Msa1050890:intron |
| TTATATGTAAAGATACTTTC+CGG | 0.343633 | 7_2:-17036867 | Msa1050890:intron |
| GATAACCCGGGTTCGAACTA+TGG | 0.347231 | 7_2:+17034525 | None:intergenic |
| TACTTTCCGGAAACTTTATA+CGG | 0.353184 | 7_2:-17036854 | Msa1050890:CDS |
| TGTATCCGTGGCCATTTAAC+AGG | 0.358909 | 7_2:+17038121 | None:intergenic |
| ACAGTCTTCTTTACCTCATA+AGG | 0.386943 | 7_2:+17034729 | None:intergenic |
| TAGATCCTATTGTGAACTTC+GGG | 0.387384 | 7_2:-17034757 | Msa1050890:CDS |
| TGTTGGTTAATCCCAATACT+TGG | 0.405487 | 7_2:+17039625 | None:intergenic |
| AGACAGAGATAGAGAGAGAA+TGG | 0.412206 | 7_2:-17039670 | Msa1050890:exon |
| GTCGTGCTTAAATAATGATA+TGG | 0.419817 | 7_2:+17037473 | None:intergenic |
| TGGTTTGTTGCCATCATTCA+AGG | 0.421574 | 7_2:-17036799 | Msa1050890:CDS |
| GTTTCTGATCTTGTTGCTGT+TGG | 0.432337 | 7_2:+17039608 | None:intergenic |
| AGAACACCAACCTGTTTAGA+TGG | 0.435601 | 7_2:+17036768 | None:intergenic |
| ATCTTGTTGCATTGAATGCC+TGG | 0.441748 | 7_2:+17038071 | None:intergenic |
| GGGTGGTCATCCATCTAAAC+AGG | 0.442035 | 7_2:-17036778 | Msa1050890:intron |
| AGAAGAGTATCCCAAGTATT+GGG | 0.442409 | 7_2:-17039636 | Msa1050890:CDS |
| CGGACCAATAATTGAACAAA+TGG | 0.444593 | 7_2:-17036566 | Msa1050890:intron |
| TGATTTATTACATGGATGGC+AGG | 0.448224 | 7_2:-17037690 | Msa1050890:CDS |
| TGGTAGATCTATTGATTTGA+AGG | 0.453173 | 7_2:+17039581 | None:intergenic |
| TGCCTAGTTGATTTATTACA+TGG | 0.454267 | 7_2:-17037698 | Msa1050890:CDS |
| TAATACCCGAAGTTCACAAT+AGG | 0.456580 | 7_2:+17034752 | None:intergenic |
| ACTTCGGGTATTACCTTATG+AGG | 0.458749 | 7_2:-17034742 | Msa1050890:CDS |
| AAGAAGAGTATCCCAAGTAT+TGG | 0.477475 | 7_2:-17039637 | Msa1050890:CDS |
| CAAACGAAAATAAAAGAGAA+GGG | 0.480930 | 7_2:-17037451 | Msa1050890:CDS |
| ACAAACACAAACACGGGAAA+GGG | 0.487774 | 7_2:+17034496 | None:intergenic |
| AGTACTTGCAAGATATATGC+AGG | 0.491599 | 7_2:-17037393 | Msa1050890:intron |
| ACAATAGGATCTAATAGCCT+TGG | 0.491868 | 7_2:+17034767 | None:intergenic |
| TTAGATCCTATTGTGAACTT+CGG | 0.497060 | 7_2:-17034758 | Msa1050890:CDS |
| AGCTGTTCTGGCATCAAAGC+AGG | 0.509131 | 7_2:-17038008 | Msa1050890:intron |
| GCCGCTATCGCAGCGTGGAG+CGG | 0.512290 | 7_2:-17034447 | Msa1050890:three_prime_UTR |
| AATGAAAGACGTGGATTCCA+TGG | 0.513588 | 7_2:+17039535 | None:intergenic |
| CTGAGTGATGGTGATGGTAA+TGG | 0.518245 | 7_2:+17039558 | None:intergenic |
| GACAGAGATAGAGAGAGAAT+GGG | 0.519538 | 7_2:-17039669 | Msa1050890:exon |
| TGGAAAGACATTGTTTCTCA+AGG | 0.521459 | 7_2:+17034787 | None:intergenic |
| ATTACACAGGTGATATCCAC+TGG | 0.534085 | 7_2:+17037656 | None:intergenic |
| GGTTTGTTGCCATCATTCAA+GGG | 0.536094 | 7_2:-17036798 | Msa1050890:CDS |
| GGATTTCCTAAAGCTTTCCC+AGG | 0.536655 | 7_2:-17038089 | Msa1050890:CDS |
| AACAAACACAAACACGGGAA+AGG | 0.538776 | 7_2:+17034495 | None:intergenic |
| ACCGCTCCACGCTGCGATAG+CGG | 0.543771 | 7_2:+17034446 | None:intergenic |
| ATCGTAAGAGCATTGTATGT+GGG | 0.544173 | 7_2:-17034550 | Msa1050890:three_prime_UTR |
| AAGATCTGTCGTGAGGGTGC+CGG | 0.545755 | 7_2:-17038053 | Msa1050890:CDS |
| TGGGTTCCATAGTTCGAACC+CGG | 0.545910 | 7_2:-17034531 | Msa1050890:three_prime_UTR |
| TTGATCCTGTTAAATGGCCA+CGG | 0.549392 | 7_2:-17038126 | Msa1050890:CDS |
| TATCGTAAGAGCATTGTATG+TGG | 0.549523 | 7_2:-17034551 | Msa1050890:three_prime_UTR |
| ACAAACGAAAATAAAAGAGA+AGG | 0.549972 | 7_2:-17037452 | Msa1050890:CDS |
| GGAAACTTTATACGGAGCTA+CGG | 0.562360 | 7_2:-17036846 | Msa1050890:CDS |
| TAGTTGATTTATTACATGGA+TGG | 0.568585 | 7_2:-17037694 | Msa1050890:CDS |
| GTTGGTTAATCCCAATACTT+GGG | 0.570219 | 7_2:+17039626 | None:intergenic |
| TGAGAAACAATGTCTTTCCA+AGG | 0.572364 | 7_2:-17034784 | Msa1050890:CDS |
| GAAACTTTATACGGAGCTAC+GGG | 0.574197 | 7_2:-17036845 | Msa1050890:CDS |
| AAACGAAAATAAAAGAGAAG+GGG | 0.577193 | 7_2:-17037450 | Msa1050890:CDS |
| TTATTACATGGATGGCAGGA+TGG | 0.577923 | 7_2:-17037686 | Msa1050890:CDS |
| TACTCAAACAAACACAAACA+CGG | 0.578396 | 7_2:+17034489 | None:intergenic |
| GTAATAAATCAACTAGGCAG+TGG | 0.580045 | 7_2:+17037702 | None:intergenic |
| GAATGTATTGCTTCTAGAGG+TGG | 0.580534 | 7_2:-17039316 | Msa1050890:CDS |
| TGATGTGAATAGGATGCTGT+TGG | 0.581084 | 7_2:-17039358 | Msa1050890:intron |
| TGGAGTTAAATAACTTCATG+TGG | 0.581950 | 7_2:-17039696 | None:intergenic |
| GAAAGGGAAATGTGATAACC+CGG | 0.583367 | 7_2:+17034512 | None:intergenic |
| TCCTCCTCCATCTGTATCCG+TGG | 0.584781 | 7_2:+17038109 | None:intergenic |
| TAGAGAGAGAATGGGCATGG+TGG | 0.585751 | 7_2:-17039661 | Msa1050890:exon |
| TCTGAATGTATTGCTTCTAG+AGG | 0.589573 | 7_2:-17039319 | Msa1050890:CDS |
| ACTCAAACAAACACAAACAC+GGG | 0.593981 | 7_2:+17034490 | None:intergenic |
| GAAATTTCACCTAATTACAC+AGG | 0.594096 | 7_2:+17037643 | None:intergenic |
| TTGTTGCCATCATTCAAGGG+TGG | 0.596482 | 7_2:-17036795 | Msa1050890:CDS |
| AGATAGAGAGAGAATGGGCA+TGG | 0.601653 | 7_2:-17039664 | Msa1050890:exon |
| GACATAATTAACATTCACCA+TGG | 0.604754 | 7_2:-17036819 | Msa1050890:CDS |
| AGTGATGGTGATGGTAATGG+TGG | 0.604759 | 7_2:+17039561 | None:intergenic |
| GGATGACCACCCTTGAATGA+TGG | 0.607929 | 7_2:+17036789 | None:intergenic |
| TCTTGTTGCATTGAATGCCT+GGG | 0.613540 | 7_2:+17038072 | None:intergenic |
| TGCAACAAGATCTGTCGTGA+GGG | 0.615842 | 7_2:-17038059 | Msa1050890:CDS |
| CCATCACCATCACTCAGCCA+TGG | 0.619563 | 7_2:-17039552 | Msa1050890:CDS |
| TTATATTTAGGATCCAGAGC+CGG | 0.620524 | 7_2:+17038034 | None:intergenic |
| TGGATTCCATGGCTGAGTGA+TGG | 0.622773 | 7_2:+17039546 | None:intergenic |
| GCCACGGATACAGATGGAGG+AGG | 0.625892 | 7_2:-17038110 | Msa1050890:CDS |
| ATGCAACAAGATCTGTCGTG+AGG | 0.646975 | 7_2:-17038060 | Msa1050890:CDS |
| GGGTTCCATAGTTCGAACCC+GGG | 0.654950 | 7_2:-17034530 | Msa1050890:three_prime_UTR |
| TAAATGGCCACGGATACAGA+TGG | 0.659066 | 7_2:-17038116 | Msa1050890:CDS |
| GCAGGATGGAAAACTTCCAG+TGG | 0.660520 | 7_2:-17037672 | Msa1050890:CDS |
| TAGCAGCCGCTATCGCAGCG+TGG | 0.667067 | 7_2:-17034452 | Msa1050890:three_prime_UTR |
| TTTCCAGAAAACGAATCACG+TGG | 0.670975 | 7_2:+17037507 | None:intergenic |
| TGAATGATGGCAACAAACCA+TGG | 0.673075 | 7_2:+17036802 | None:intergenic |
| ATCCATGTAATAAATCAACT+AGG | 0.676918 | 7_2:+17037696 | None:intergenic |
| AAAGGGAAATGTGATAACCC+GGG | 0.689219 | 7_2:+17034513 | None:intergenic |
| CCATGGCTGAGTGATGGTGA+TGG | 0.693909 | 7_2:+17039552 | None:intergenic |
| ATGGCCACGGATACAGATGG+AGG | 0.701596 | 7_2:-17038113 | Msa1050890:CDS |
| TTACAGGGCAATGAAAGACG+TGG | 0.708500 | 7_2:+17039526 | None:intergenic |
| TTCCAGAAAACGAATCACGT+GGG | 0.721846 | 7_2:+17037508 | None:intergenic |
| GTGAGCGAAGAACTTGACAG+CGG | 0.735138 | 7_2:-17036586 | Msa1050890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAACAATATTAACAATC+AGG | + | chr7_2:17036273-17036292 | None:intergenic | 15.0% |
| !! | TTGAACTTATTCTTAATATT+TGG | - | chr7_2:17036834-17036853 | Msa1050890:CDS | 15.0% |
| !!! | ATTTTTCTTAAGCAAAAATT+GGG | - | chr7_2:17037663-17037682 | Msa1050890:CDS | 15.0% |
| !! | GGAAATTATATTATTTAAAG+TGG | - | chr7_2:17037692-17037711 | Msa1050890:CDS | 15.0% |
| !!! | TATATGACTCAATATATTTT+TGG | + | chr7_2:17037897-17037916 | None:intergenic | 15.0% |
| !!! | TATTTTCTCTTAAAATGAAA+TGG | + | chr7_2:17038713-17038732 | None:intergenic | 15.0% |
| !! | TTGGTTTAAAAAAAAAAGAA+GGG | - | chr7_2:17038744-17038763 | Msa1050890:intron | 15.0% |
| !! | TTGTTAAACAAAAAAATAAC+AGG | + | chr7_2:17038867-17038886 | None:intergenic | 15.0% |
| !! | AAACAAAAACAACAAAAATA+AGG | + | chr7_2:17039044-17039063 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTATGAAATAG+CGG | - | chr7_2:17039055-17039074 | Msa1050890:intron | 15.0% |
| !!! | AAACTGAATTTGTGTTTTTT+TGG | - | chr7_2:17034739-17034758 | Msa1050890:CDS | 20.0% |
| !!! | AACTGAATTTGTGTTTTTTT+GGG | - | chr7_2:17034740-17034759 | Msa1050890:CDS | 20.0% |
| !! | TAAAAAACATGTTTATTCTG+AGG | + | chr7_2:17034861-17034880 | None:intergenic | 20.0% |
| !! | ATAAAAGAATGAACAAAAGA+AGG | + | chr7_2:17034896-17034915 | None:intergenic | 20.0% |
| !!! | TATATGAAACTAACTTTTTC+AGG | - | chr7_2:17035111-17035130 | Msa1050890:intron | 20.0% |
| !!! | ACATGTTTATTAGTTGTTTT+CGG | - | chr7_2:17035301-17035320 | Msa1050890:intron | 20.0% |
| !!! | ATCTATAGCTTTTATGAAAA+CGG | - | chr7_2:17035370-17035389 | Msa1050890:intron | 20.0% |
| !!! | TAAGCTATTTCTATAACAAA+AGG | + | chr7_2:17035411-17035430 | None:intergenic | 20.0% |
| !! | CTTAAAAAAAACGTTTGTAT+CGG | + | chr7_2:17035619-17035638 | None:intergenic | 20.0% |
| !!! | AGAACAGCTATTTTATATTT+AGG | + | chr7_2:17036104-17036123 | None:intergenic | 20.0% |
| !! | TAAATATAAAATAGCTGTTC+TGG | - | chr7_2:17036103-17036122 | Msa1050890:intron | 20.0% |
| !! | AACACCAATAAATGAATTTA+TGG | - | chr7_2:17036509-17036528 | Msa1050890:intron | 20.0% |
| !!! | CTTAATATTTGGATGATTTT+TGG | - | chr7_2:17036845-17036864 | Msa1050890:CDS | 20.0% |
| !!! | TCTATTTCTAATTTAGTCTA+TGG | - | chr7_2:17036945-17036964 | Msa1050890:intron | 20.0% |
| !! | GAGTACATAAAAATAATAAG+TGG | - | chr7_2:17036967-17036986 | Msa1050890:intron | 20.0% |
| !! | TTATATGTAAAGATACTTTC+CGG | - | chr7_2:17037256-17037275 | Msa1050890:intron | 20.0% |
| !!! | ATTTTTCTATACATGTTTCA+TGG | - | chr7_2:17037589-17037608 | Msa1050890:intron | 20.0% |
| !!! | GATTTTTCTTAAGCAAAAAT+TGG | - | chr7_2:17037662-17037681 | Msa1050890:CDS | 20.0% |
| !! | CTATAACTTATAAGATATCA+TGG | + | chr7_2:17038469-17038488 | None:intergenic | 20.0% |
| !!! | CTTCTTTTTTTTTTAAACCA+AGG | + | chr7_2:17038745-17038764 | None:intergenic | 20.0% |
| !! | CTTGGTTTAAAAAAAAAAGA+AGG | - | chr7_2:17038743-17038762 | Msa1050890:intron | 20.0% |
| !!! | ATTTTTGTGTACATTATGTT+TGG | + | chr7_2:17039446-17039465 | None:intergenic | 20.0% |
| !! | ATAATGTACACAAAAATTCA+GGG | - | chr7_2:17039449-17039468 | Msa1050890:intron | 20.0% |
| !!! | ATTCCATGCTTTTTTTCTAT+TGG | - | chr7_2:17034641-17034660 | Msa1050890:three_prime_UTR | 25.0% |
| ! | TTTCCAATAGAAAAAAAGCA+TGG | + | chr7_2:17034647-17034666 | None:intergenic | 25.0% |
| !! | CCATTTTCAAACTCAATAAA+GGG | + | chr7_2:17034696-17034715 | None:intergenic | 25.0% |
| ! | CCTTTATTGAGTTTGAAAAT+GGG | - | chr7_2:17034694-17034713 | Msa1050890:three_prime_UTR | 25.0% |
| !!! | AACATGTTTTTTACTCTAGA+AGG | - | chr7_2:17034868-17034887 | Msa1050890:intron | 25.0% |
| !!! | CTTATTTTCATTAGTTTTCC+AGG | - | chr7_2:17035324-17035343 | Msa1050890:intron | 25.0% |
| !!! | TCAGATTAAAAGTACTAAAG+AGG | + | chr7_2:17035491-17035510 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTTAACTATGCAT+TGG | + | chr7_2:17035858-17035877 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGATCCTGTTAAA+TGG | - | chr7_2:17035991-17036010 | Msa1050890:intron | 25.0% |
| ! | TCAACAAATATCTATCTACA+TGG | + | chr7_2:17036377-17036396 | None:intergenic | 25.0% |
| ! | ATCCATGTAATAAATCAACT+AGG | + | chr7_2:17036430-17036449 | None:intergenic | 25.0% |
| !! | TAGTTGATTTATTACATGGA+TGG | - | chr7_2:17036429-17036448 | Msa1050890:intron | 25.0% |
| ! | AGAGCCATAAATTCATTTAT+TGG | + | chr7_2:17036516-17036535 | None:intergenic | 25.0% |
| ! | ACAAACGAAAATAAAAGAGA+AGG | - | chr7_2:17036671-17036690 | Msa1050890:intron | 25.0% |
| ! | CAAACGAAAATAAAAGAGAA+GGG | - | chr7_2:17036672-17036691 | Msa1050890:intron | 25.0% |
| ! | AAACGAAAATAAAAGAGAAG+GGG | - | chr7_2:17036673-17036692 | Msa1050890:intron | 25.0% |
| ! | AGACTAAATTAGAAATAGAG+TGG | + | chr7_2:17036944-17036963 | None:intergenic | 25.0% |
| ! | ATACTTTACGACTAACATAA+TGG | + | chr7_2:17037012-17037031 | None:intergenic | 25.0% |
| ! | ACATGTAGACAAATGTTAAA+AGG | + | chr7_2:17037447-17037466 | None:intergenic | 25.0% |
| !!! | ATATGTTGTATTGTTTTGTC+AGG | - | chr7_2:17037470-17037489 | Msa1050890:CDS | 25.0% |
| ! | TTCACCATTTGTTCAATTAT+TGG | + | chr7_2:17037564-17037583 | None:intergenic | 25.0% |
| ! | TTAAGCAAAAATTGGGAAAA+GGG | - | chr7_2:17037670-17037689 | Msa1050890:CDS | 25.0% |
| ! | TATATATTCCTAGTATGCTA+AGG | + | chr7_2:17037816-17037835 | None:intergenic | 25.0% |
| ! | CATACTATCTTAATCTGTAT+AGG | + | chr7_2:17038272-17038291 | None:intergenic | 25.0% |
| !!! | TCATTGTAACTTTTGTTTGA+TGG | - | chr7_2:17038298-17038317 | Msa1050890:intron | 25.0% |
| !!! | CATTGTAACTTTTGTTTGAT+GGG | - | chr7_2:17038299-17038318 | Msa1050890:intron | 25.0% |
| ! | TTTCTCTTAAAATGAAATGG+TGG | + | chr7_2:17038710-17038729 | None:intergenic | 25.0% |
| ! | AGAAAATACAAAATTGTCCT+TGG | - | chr7_2:17038725-17038744 | Msa1050890:intron | 25.0% |
| ! | AACTAGAACAAAAAAGTAAC+AGG | + | chr7_2:17038907-17038926 | None:intergenic | 25.0% |
| !! | GTTTTATATGAACAAAACAG+AGG | + | chr7_2:17039000-17039019 | None:intergenic | 25.0% |
| ! | TATACCATAGTAGTTAATAG+CGG | + | chr7_2:17039132-17039151 | None:intergenic | 25.0% |
| ! | CATAATGTACACAAAAATTC+AGG | - | chr7_2:17039448-17039467 | Msa1050890:intron | 25.0% |
| !! | TACAAAGAACTTGATTCTTT+TGG | - | chr7_2:17039545-17039564 | Msa1050890:CDS | 25.0% |
| !! | TGGTAGATCTATTGATTTGA+AGG | + | chr7_2:17034545-17034564 | None:intergenic | 30.0% |
| ATTGGAAACTCGTAAATGAA+TGG | - | chr7_2:17034659-17034678 | Msa1050890:three_prime_UTR | 30.0% | |
| CCCTTTATTGAGTTTGAAAA+TGG | - | chr7_2:17034693-17034712 | Msa1050890:three_prime_UTR | 30.0% | |
| ! | CCCATTTTCAAACTCAATAA+AGG | + | chr7_2:17034697-17034716 | None:intergenic | 30.0% |
| ATCAATGTTGTCTTCTTGTT+TGG | - | chr7_2:17034942-17034961 | Msa1050890:intron | 30.0% | |
| CAACTATCTTGAATAGCTTA+CGG | + | chr7_2:17035053-17035072 | None:intergenic | 30.0% | |
| ACGATAAGCAAATGTCAATT+AGG | - | chr7_2:17035194-17035213 | Msa1050890:intron | 30.0% | |
| CGATAAGCAAATGTCAATTA+GGG | - | chr7_2:17035195-17035214 | Msa1050890:intron | 30.0% | |
| AACTTCCAAGAAACACTTAT+GGG | + | chr7_2:17035741-17035760 | None:intergenic | 30.0% | |
| TAACTTCCAAGAAACACTTA+TGG | + | chr7_2:17035742-17035761 | None:intergenic | 30.0% | |
| !! | TAATATCATGCAGTCGATTT+TGG | + | chr7_2:17036335-17036354 | None:intergenic | 30.0% |
| ! | ATTATTCTTTCTTTTGCTGC+AGG | - | chr7_2:17036397-17036416 | Msa1050890:intron | 30.0% |
| ! | TGCCTAGTTGATTTATTACA+TGG | - | chr7_2:17036425-17036444 | Msa1050890:intron | 30.0% |
| GAAATTTCACCTAATTACAC+AGG | + | chr7_2:17036483-17036502 | None:intergenic | 30.0% | |
| GTCGTGCTTAAATAATGATA+TGG | + | chr7_2:17036653-17036672 | None:intergenic | 30.0% | |
| !! | TGGATGATTTTTGGAAGAAA+TGG | - | chr7_2:17036854-17036873 | Msa1050890:CDS | 30.0% |
| ! | CAGATTTTCATAAGTCTTAG+AGG | + | chr7_2:17036898-17036917 | None:intergenic | 30.0% |
| AGAAATAGAGTGGTAATTGA+GGG | + | chr7_2:17036934-17036953 | None:intergenic | 30.0% | |
| TAGAAATAGAGTGGTAATTG+AGG | + | chr7_2:17036935-17036954 | None:intergenic | 30.0% | |
| TCATTCATACTTAACAGCAT+TGG | - | chr7_2:17037232-17037251 | Msa1050890:intron | 30.0% | |
| TACTTTCCGGAAACTTTATA+CGG | - | chr7_2:17037269-17037288 | Msa1050890:intron | 30.0% | |
| GACATAATTAACATTCACCA+TGG | - | chr7_2:17037304-17037323 | Msa1050890:intron | 30.0% | |
| ! | CAATAACAAAGGCATAAAAG+TGG | + | chr7_2:17037412-17037431 | None:intergenic | 30.0% |
| ATCAGAAAGAGCAATAACAA+AGG | + | chr7_2:17037423-17037442 | None:intergenic | 30.0% | |
| TCATTCACATCTTATTGCTA+AGG | + | chr7_2:17037635-17037654 | None:intergenic | 30.0% | |
| CTTAAGCAAAAATTGGGAAA+AGG | - | chr7_2:17037669-17037688 | Msa1050890:CDS | 30.0% | |
| TAAGCAAAAATTGGGAAAAG+GGG | - | chr7_2:17037671-17037690 | Msa1050890:CDS | 30.0% | |
| CATCTTACAATTGTCTCAAA+GGG | - | chr7_2:17037725-17037744 | Msa1050890:intron | 30.0% | |
| ATCTTACAATTGTCTCAAAG+GGG | - | chr7_2:17037726-17037745 | Msa1050890:intron | 30.0% | |
| ! | GTGATAATGTTGATCTGAAT+TGG | - | chr7_2:17037774-17037793 | Msa1050890:intron | 30.0% |
| GATATATACCTTAGCATACT+AGG | - | chr7_2:17037805-17037824 | Msa1050890:intron | 30.0% | |
| CTGTCAAATAGTCTAAATTG+TGG | - | chr7_2:17039210-17039229 | Msa1050890:intron | 30.0% | |
| GCTTGATACTATTTATGTGA+GGG | - | chr7_2:17039232-17039251 | Msa1050890:intron | 30.0% | |
| TTAGATCCTATTGTGAACTT+CGG | - | chr7_2:17039365-17039384 | Msa1050890:intron | 30.0% | |
| !! | GAAGACTGTTGTATTTTAAG+CGG | - | chr7_2:17039408-17039427 | Msa1050890:intron | 30.0% |
| !! | AAGACTGTTGTATTTTAAGC+GGG | - | chr7_2:17039409-17039428 | Msa1050890:intron | 30.0% |
| TTGTTGCAGCTAACATAAAA+TGG | + | chr7_2:17039523-17039542 | None:intergenic | 30.0% | |
| TACTCAAACAAACACAAACA+CGG | + | chr7_2:17039637-17039656 | None:intergenic | 30.0% | |
| !! | AAGAAGAGTATCCCAAGTAT+TGG | - | chr7_2:17034486-17034505 | Msa1050890:three_prime_UTR | 35.0% |
| !! | AGAAGAGTATCCCAAGTATT+GGG | - | chr7_2:17034487-17034506 | Msa1050890:three_prime_UTR | 35.0% |
| GTTGGTTAATCCCAATACTT+GGG | + | chr7_2:17034500-17034519 | None:intergenic | 35.0% | |
| ! | TGTTGGTTAATCCCAATACT+TGG | + | chr7_2:17034501-17034520 | None:intergenic | 35.0% |
| ! | AGTTTGAAAATGGGTTTCGT+TGG | - | chr7_2:17034703-17034722 | Msa1050890:exon | 35.0% |
| !!! | AAATGGGTTTCGTTGGTTTT+TGG | - | chr7_2:17034710-17034729 | Msa1050890:exon | 35.0% |
| !! | TTTTTGGGAGTGATGTGAAT+AGG | - | chr7_2:17034755-17034774 | Msa1050890:CDS | 35.0% |
| TCTGAATGTATTGCTTCTAG+AGG | - | chr7_2:17034804-17034823 | Msa1050890:CDS | 35.0% | |
| ! | GAAGACAACATTGATTGTGT+TGG | + | chr7_2:17034937-17034956 | None:intergenic | 35.0% |
| CCAAATAAGACAATCCAAAC+AGG | + | chr7_2:17035221-17035240 | None:intergenic | 35.0% | |
| ! | CCTGTTTGGATTGTCTTATT+TGG | - | chr7_2:17035218-17035237 | Msa1050890:intron | 35.0% |
| !! | TCACTTTTCATAAGCTATCC+TGG | + | chr7_2:17035345-17035364 | None:intergenic | 35.0% |
| GGTAACATTAAGGTCATCTT+TGG | + | chr7_2:17035461-17035480 | None:intergenic | 35.0% | |
| !! | TAAAAGTACTAAAGAGGCAG+AGG | + | chr7_2:17035485-17035504 | None:intergenic | 35.0% |
| GAAACACTTATGGGGAAAAA+TGG | + | chr7_2:17035732-17035751 | None:intergenic | 35.0% | |
| ! | TTTTCCCCATAAGTGTTTCT+TGG | - | chr7_2:17035733-17035752 | Msa1050890:intron | 35.0% |
| ACTTCCAAGAAACACTTATG+GGG | + | chr7_2:17035740-17035759 | None:intergenic | 35.0% | |
| CATTGAGATCAATTGGACAT+CGG | + | chr7_2:17035809-17035828 | None:intergenic | 35.0% | |
| ! | TTATATTTAGGATCCAGAGC+CGG | + | chr7_2:17036092-17036111 | None:intergenic | 35.0% |
| TATATGTTTCCATGACTCCA+TGG | + | chr7_2:17036185-17036204 | None:intergenic | 35.0% | |
| ! | TCAGGTCAACTGATTTAGAT+CGG | + | chr7_2:17036255-17036274 | None:intergenic | 35.0% |
| !! | GCCATTGATTCTAGATCAAA+CGG | + | chr7_2:17036313-17036332 | None:intergenic | 35.0% |
| GTAATAAATCAACTAGGCAG+TGG | + | chr7_2:17036424-17036443 | None:intergenic | 35.0% | |
| TGATTTATTACATGGATGGC+AGG | - | chr7_2:17036433-17036452 | Msa1050890:intron | 35.0% | |
| TGGATATCACCTGTGTAATT+AGG | - | chr7_2:17036471-17036490 | Msa1050890:intron | 35.0% | |
| TAAAAGAGAAGGGGAGATAT+TGG | - | chr7_2:17036682-17036701 | Msa1050890:intron | 35.0% | |
| AGTACTTGCAAGATATATGC+AGG | - | chr7_2:17036730-17036749 | Msa1050890:intron | 35.0% | |
| TTGAATTTGTGTTCTCTGCA+TGG | - | chr7_2:17036764-17036783 | Msa1050890:intron | 35.0% | |
| ATACTTGAGGGACTAAATGA+TGG | - | chr7_2:17037154-17037173 | Msa1050890:intron | 35.0% | |
| !! | ATTGTTTTGTCAGGCTTTTG+AGG | - | chr7_2:17037479-17037498 | Msa1050890:CDS | 35.0% |
| CGGACCAATAATTGAACAAA+TGG | - | chr7_2:17037557-17037576 | Msa1050890:intron | 35.0% | |
| ATCTTATTGCTAAGGAAGGA+AGG | + | chr7_2:17037627-17037646 | None:intergenic | 35.0% | |
| TCACATCTTATTGCTAAGGA+AGG | + | chr7_2:17037631-17037650 | None:intergenic | 35.0% | |
| GCATCTTACAATTGTCTCAA+AGG | - | chr7_2:17037724-17037743 | Msa1050890:intron | 35.0% | |
| AACATTATCACTGTCCTGAA+GGG | + | chr7_2:17037765-17037784 | None:intergenic | 35.0% | |
| TGTTGATCTGAATTGGTCAT+AGG | - | chr7_2:17037781-17037800 | Msa1050890:intron | 35.0% | |
| AGAAGAACCTATGCATACTA+GGG | + | chr7_2:17038104-17038123 | None:intergenic | 35.0% | |
| TAAGGGATAATGCAAATGAG+AGG | - | chr7_2:17038209-17038228 | Msa1050890:intron | 35.0% | |
| ATCAAGTATTTGCACGATAC+AGG | + | chr7_2:17038355-17038374 | None:intergenic | 35.0% | |
| AAGATATCATGGAGAACTTG+TGG | + | chr7_2:17038458-17038477 | None:intergenic | 35.0% | |
| AGTACCATAGTAGTCAATAG+CGG | - | chr7_2:17038552-17038571 | Msa1050890:intron | 35.0% | |
| TAGAAACAGAGAGAGAAGAA+TGG | + | chr7_2:17038956-17038975 | None:intergenic | 35.0% | |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr7_2:17039094-17039113 | Msa1050890:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr7_2:17039125-17039144 | None:intergenic | 35.0% |
| CTATCCGCTATTAACTACTA+TGG | - | chr7_2:17039125-17039144 | Msa1050890:intron | 35.0% | |
| GGCTTGATACTATTTATGTG+AGG | - | chr7_2:17039231-17039250 | Msa1050890:intron | 35.0% | |
| CTATTTATGTGAGGGTAACA+TGG | - | chr7_2:17039240-17039259 | Msa1050890:intron | 35.0% | |
| ! | TGGAAAGACATTGTTTCTCA+AGG | + | chr7_2:17039339-17039358 | None:intergenic | 35.0% |
| TGAGAAACAATGTCTTTCCA+AGG | - | chr7_2:17039339-17039358 | Msa1050890:CDS | 35.0% | |
| ACAATAGGATCTAATAGCCT+TGG | + | chr7_2:17039359-17039378 | None:intergenic | 35.0% | |
| TAGATCCTATTGTGAACTTC+GGG | - | chr7_2:17039366-17039385 | Msa1050890:intron | 35.0% | |
| TAATACCCGAAGTTCACAAT+AGG | + | chr7_2:17039374-17039393 | None:intergenic | 35.0% | |
| ACAGTCTTCTTTACCTCATA+AGG | + | chr7_2:17039397-17039416 | None:intergenic | 35.0% | |
| !! | TATCGTAAGAGCATTGTATG+TGG | - | chr7_2:17039572-17039591 | Msa1050890:CDS | 35.0% |
| !! | ATCGTAAGAGCATTGTATGT+GGG | - | chr7_2:17039573-17039592 | Msa1050890:CDS | 35.0% |
| ACTCAAACAAACACAAACAC+GGG | + | chr7_2:17039636-17039655 | None:intergenic | 35.0% | |
| AGACAGAGATAGAGAGAGAA+TGG | - | chr7_2:17034453-17034472 | Msa1050890:three_prime_UTR | 40.0% | |
| GACAGAGATAGAGAGAGAAT+GGG | - | chr7_2:17034454-17034473 | Msa1050890:three_prime_UTR | 40.0% | |
| GTTTCTGATCTTGTTGCTGT+TGG | + | chr7_2:17034518-17034537 | None:intergenic | 40.0% | |
| AATGAAAGACGTGGATTCCA+TGG | + | chr7_2:17034591-17034610 | None:intergenic | 40.0% | |
| GAATGAGTGAGTGACTTACA+GGG | + | chr7_2:17034615-17034634 | None:intergenic | 40.0% | |
| TGAATGAGTGAGTGACTTAC+AGG | + | chr7_2:17034616-17034635 | None:intergenic | 40.0% | |
| TGATGTGAATAGGATGCTGT+TGG | - | chr7_2:17034765-17034784 | Msa1050890:CDS | 40.0% | |
| ! | GAATGTATTGCTTCTAGAGG+TGG | - | chr7_2:17034807-17034826 | Msa1050890:CDS | 40.0% |
| AATGTCAATTAGGGCCTGTT+TGG | - | chr7_2:17035204-17035223 | Msa1050890:intron | 40.0% | |
| CTGCTAAGAACGATCTCTAA+GGG | + | chr7_2:17035525-17035544 | None:intergenic | 40.0% | |
| GCACTCACATTGAGATCAAT+TGG | + | chr7_2:17035816-17035835 | None:intergenic | 40.0% | |
| !! | AATCGCTAACTACTTTTCCC+TGG | + | chr7_2:17035903-17035922 | None:intergenic | 40.0% |
| TTGATCCTGTTAAATGGCCA+CGG | - | chr7_2:17035997-17036016 | Msa1050890:intron | 40.0% | |
| TCTTGTTGCATTGAATGCCT+GGG | + | chr7_2:17036054-17036073 | None:intergenic | 40.0% | |
| ATCTTGTTGCATTGAATGCC+TGG | + | chr7_2:17036055-17036074 | None:intergenic | 40.0% | |
| TACACAGTCGTTTACATCCA+TGG | - | chr7_2:17036165-17036184 | Msa1050890:intron | 40.0% | |
| ! | GCCGTTTGATCTAGAATCAA+TGG | - | chr7_2:17036309-17036328 | Msa1050890:intron | 40.0% |
| TTATTACATGGATGGCAGGA+TGG | - | chr7_2:17036437-17036456 | Msa1050890:intron | 40.0% | |
| ATTACACAGGTGATATCCAC+TGG | + | chr7_2:17036470-17036489 | None:intergenic | 40.0% | |
| TTCCAGAAAACGAATCACGT+GGG | + | chr7_2:17036618-17036637 | None:intergenic | 40.0% | |
| TTTCCAGAAAACGAATCACG+TGG | + | chr7_2:17036619-17036638 | None:intergenic | 40.0% | |
| !! | ACGTGATTCGTTTTCTGGAA+AGG | - | chr7_2:17036618-17036637 | Msa1050890:CDS | 40.0% |
| !! | ATTCGTTTTCTGGAAAGGCA+TGG | - | chr7_2:17036623-17036642 | Msa1050890:CDS | 40.0% |
| GTGTTCTCTGCATGGTATTA+TGG | - | chr7_2:17036772-17036791 | Msa1050890:intron | 40.0% | |
| GTAGCTCCGTATAAAGTTTC+CGG | + | chr7_2:17037278-17037297 | None:intergenic | 40.0% | |
| GGAAACTTTATACGGAGCTA+CGG | - | chr7_2:17037277-17037296 | Msa1050890:intron | 40.0% | |
| GAAACTTTATACGGAGCTAC+GGG | - | chr7_2:17037278-17037297 | Msa1050890:intron | 40.0% | |
| TGAATGATGGCAACAAACCA+TGG | + | chr7_2:17037324-17037343 | None:intergenic | 40.0% | |
| !! | TGGTTTGTTGCCATCATTCA+AGG | - | chr7_2:17037324-17037343 | Msa1050890:intron | 40.0% |
| !! | GGTTTGTTGCCATCATTCAA+GGG | - | chr7_2:17037325-17037344 | Msa1050890:intron | 40.0% |
| AGAACACCAACCTGTTTAGA+TGG | + | chr7_2:17037358-17037377 | None:intergenic | 40.0% | |
| GAGGCTGGTGTGAAATTAAT+TGG | - | chr7_2:17037498-17037517 | Msa1050890:CDS | 40.0% | |
| ACATTATCACTGTCCTGAAG+GGG | + | chr7_2:17037764-17037783 | None:intergenic | 40.0% | |
| CAACATTATCACTGTCCTGA+AGG | + | chr7_2:17037766-17037785 | None:intergenic | 40.0% | |
| TGAGTCATATAGAACCCACT+TGG | - | chr7_2:17037906-17037925 | Msa1050890:intron | 40.0% | |
| GAGTCATATAGAACCCACTT+GGG | - | chr7_2:17037907-17037926 | Msa1050890:intron | 40.0% | |
| GAGAAGAACCTATGCATACT+AGG | + | chr7_2:17038105-17038124 | None:intergenic | 40.0% | |
| ACCATATATAAGTCGCTAGG+CGG | + | chr7_2:17038176-17038195 | None:intergenic | 40.0% | |
| CCTAGCGACTTATATATGGT+GGG | - | chr7_2:17038176-17038195 | Msa1050890:intron | 40.0% | |
| !! | TATATATGGTGGGTTGCATG+AGG | - | chr7_2:17038186-17038205 | Msa1050890:intron | 40.0% |
| !!! | ACTTTTGTTTGATGGGTTGC+TGG | - | chr7_2:17038306-17038325 | Msa1050890:intron | 40.0% |
| TTTCATAAGCACTCCCAAAC+AGG | + | chr7_2:17038395-17038414 | None:intergenic | 40.0% | |
| ACAGAACAGCAGAAAAGCAA+AGG | + | chr7_2:17038786-17038805 | None:intergenic | 40.0% | |
| TAGAGGAAGATTTACAGCAG+AGG | + | chr7_2:17038821-17038840 | None:intergenic | 40.0% | |
| AGAGAGAGAAGAATGGAGTT+TGG | + | chr7_2:17038949-17038968 | None:intergenic | 40.0% | |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr7_2:17039093-17039112 | Msa1050890:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr7_2:17039095-17039114 | Msa1050890:intron | 40.0% |
| ACTTCGGGTATTACCTTATG+AGG | - | chr7_2:17039381-17039400 | Msa1050890:intron | 40.0% | |
| AAAGGGAAATGTGATAACCC+GGG | + | chr7_2:17039613-17039632 | None:intergenic | 40.0% | |
| GAAAGGGAAATGTGATAACC+CGG | + | chr7_2:17039614-17039633 | None:intergenic | 40.0% | |
| ACAAACACAAACACGGGAAA+GGG | + | chr7_2:17039630-17039649 | None:intergenic | 40.0% | |
| AACAAACACAAACACGGGAA+AGG | + | chr7_2:17039631-17039650 | None:intergenic | 40.0% | |
| AGATAGAGAGAGAATGGGCA+TGG | - | chr7_2:17034459-17034478 | Msa1050890:three_prime_UTR | 45.0% | |
| !! | AGTGATGGTGATGGTAATGG+TGG | + | chr7_2:17034565-17034584 | None:intergenic | 45.0% |
| !! | CTGAGTGATGGTGATGGTAA+TGG | + | chr7_2:17034568-17034587 | None:intergenic | 45.0% |
| TTACAGGGCAATGAAAGACG+TGG | + | chr7_2:17034600-17034619 | None:intergenic | 45.0% | |
| AGGCAGAGGTGGTAACATTA+AGG | + | chr7_2:17035471-17035490 | None:intergenic | 45.0% | |
| AAGTACTAAAGAGGCAGAGG+TGG | + | chr7_2:17035482-17035501 | None:intergenic | 45.0% | |
| CCTGCTAAGAACGATCTCTA+AGG | + | chr7_2:17035526-17035545 | None:intergenic | 45.0% | |
| CCTTAGAGATCGTTCTTAGC+AGG | - | chr7_2:17035523-17035542 | Msa1050890:intron | 45.0% | |
| !! | GCAGGTACTGACGATCTATT+TGG | - | chr7_2:17035541-17035560 | Msa1050890:intron | 45.0% |
| TGTATCCGTGGCCATTTAAC+AGG | + | chr7_2:17036005-17036024 | None:intergenic | 45.0% | |
| TAAATGGCCACGGATACAGA+TGG | - | chr7_2:17036007-17036026 | Msa1050890:intron | 45.0% | |
| GGATTTCCTAAAGCTTTCCC+AGG | - | chr7_2:17036034-17036053 | Msa1050890:intron | 45.0% | |
| TGAATGCCTGGGAAAGCTTT+AGG | + | chr7_2:17036043-17036062 | None:intergenic | 45.0% | |
| ATGCAACAAGATCTGTCGTG+AGG | - | chr7_2:17036063-17036082 | Msa1050890:intron | 45.0% | |
| TGCAACAAGATCTGTCGTGA+GGG | - | chr7_2:17036064-17036083 | Msa1050890:intron | 45.0% | |
| CGTTTACATCCATGGAGTCA+TGG | - | chr7_2:17036173-17036192 | Msa1050890:intron | 45.0% | |
| ! | TGTAGAGAGCGTGATACTTG+AGG | - | chr7_2:17037141-17037160 | Msa1050890:intron | 45.0% |
| ! | GTAGAGAGCGTGATACTTGA+GGG | - | chr7_2:17037142-17037161 | Msa1050890:intron | 45.0% |
| TTGTTGCCATCATTCAAGGG+TGG | - | chr7_2:17037328-17037347 | Msa1050890:intron | 45.0% | |
| GGTCATCCATCTAAACAGGT+TGG | - | chr7_2:17037349-17037368 | Msa1050890:intron | 45.0% | |
| !!! | TTTTGTCAGGCTTTTGAGGC+TGG | - | chr7_2:17037483-17037502 | Msa1050890:CDS | 45.0% |
| CAATCGAACCTAAGACCTTG+AGG | + | chr7_2:17037975-17037994 | None:intergenic | 45.0% | |
| GTCTTAGGTTCGATTGTCTC+CGG | - | chr7_2:17037979-17037998 | Msa1050890:intron | 45.0% | |
| ! | ATTGTCTCCGGTGCCAATTT+GGG | - | chr7_2:17037991-17038010 | Msa1050890:intron | 45.0% |
| TAAACTAGCCCCACCCAAAT+TGG | + | chr7_2:17038007-17038026 | None:intergenic | 45.0% | |
| CTAGGGATGGTGCAATTAAG+AGG | + | chr7_2:17038087-17038106 | None:intergenic | 45.0% | |
| GAACCTATGCATACTAGGGA+TGG | + | chr7_2:17038100-17038119 | None:intergenic | 45.0% | |
| CGGTTGTATGTCAACTATGG+TGG | + | chr7_2:17038156-17038175 | None:intergenic | 45.0% | |
| AGGCGGTTGTATGTCAACTA+TGG | + | chr7_2:17038159-17038178 | None:intergenic | 45.0% | |
| ACCGCCTAGCGACTTATATA+TGG | - | chr7_2:17038172-17038191 | Msa1050890:intron | 45.0% | |
| GCCTAGCGACTTATATATGG+TGG | - | chr7_2:17038175-17038194 | Msa1050890:intron | 45.0% | |
| CCCACCATATATAAGTCGCT+AGG | + | chr7_2:17038179-17038198 | None:intergenic | 45.0% | |
| AGAGGAACCTGTGCATACTA+GGG | - | chr7_2:17038227-17038246 | Msa1050890:intron | 45.0% | |
| TCCTATTCGTAGAGCCTGTT+TGG | - | chr7_2:17038378-17038397 | Msa1050890:intron | 45.0% | |
| CCTATTCGTAGAGCCTGTTT+GGG | - | chr7_2:17038379-17038398 | Msa1050890:intron | 45.0% | |
| ! | TTGGCCGCTATTGACTACTA+TGG | + | chr7_2:17038559-17038578 | None:intergenic | 45.0% |
| GAGCAAACACGACAAAGTAG+AGG | + | chr7_2:17038838-17038857 | None:intergenic | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr7_2:17039100-17039119 | None:intergenic | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | + | chr7_2:17039101-17039120 | None:intergenic | 45.0% | |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | - | chr7_2:17039099-17039118 | Msa1050890:intron | 45.0% |
| CATGGCTGAATCTCATTTGC+AGG | - | chr7_2:17039258-17039277 | Msa1050890:CDS | 45.0% | |
| TAGAGAGAGAATGGGCATGG+TGG | - | chr7_2:17034462-17034481 | Msa1050890:three_prime_UTR | 50.0% | |
| TGGATTCCATGGCTGAGTGA+TGG | + | chr7_2:17034580-17034599 | None:intergenic | 50.0% | |
| TCTAGACACACTTGCATGCC+AGG | - | chr7_2:17035882-17035901 | Msa1050890:intron | 50.0% | |
| CTAGACACACTTGCATGCCA+GGG | - | chr7_2:17035883-17035902 | Msa1050890:intron | 50.0% | |
| AGCTGTTCTGGCATCAAAGC+AGG | - | chr7_2:17036115-17036134 | Msa1050890:intron | 50.0% | |
| GCAGGATGGAAAACTTCCAG+TGG | - | chr7_2:17036451-17036470 | Msa1050890:intron | 50.0% | |
| ! | CACCCACGTGATTCGTTTTC+TGG | - | chr7_2:17036613-17036632 | Msa1050890:CDS | 50.0% |
| GGATGACCACCCTTGAATGA+TGG | + | chr7_2:17037337-17037356 | None:intergenic | 50.0% | |
| GGGTGGTCATCCATCTAAAC+AGG | - | chr7_2:17037345-17037364 | Msa1050890:intron | 50.0% | |
| GTGAGCGAAGAACTTGACAG+CGG | - | chr7_2:17037537-17037556 | Msa1050890:intron | 50.0% | |
| GATTTCTACTCCTCCCCTTC+AGG | - | chr7_2:17037748-17037767 | Msa1050890:intron | 50.0% | |
| TTATCACTGTCCTGAAGGGG+AGG | + | chr7_2:17037761-17037780 | None:intergenic | 50.0% | |
| TCGAACCTAAGACCTTGAGG+AGG | + | chr7_2:17037972-17037991 | None:intergenic | 50.0% | |
| ! | GATTGTCTCCGGTGCCAATT+TGG | - | chr7_2:17037990-17038009 | Msa1050890:intron | 50.0% |
| GCACCATCCCTAGTATGCAT+AGG | - | chr7_2:17038094-17038113 | Msa1050890:CDS | 50.0% | |
| ! | TGGTGGCTTGCATGAGGTAA+GGG | + | chr7_2:17038139-17038158 | None:intergenic | 50.0% |
| ! | ATGGTGGCTTGCATGAGGTA+AGG | + | chr7_2:17038140-17038159 | None:intergenic | 50.0% |
| ! | CAACTATGGTGGCTTGCATG+AGG | + | chr7_2:17038145-17038164 | None:intergenic | 50.0% |
| !! | ATGGTGGGTTGCATGAGGTA+AGG | - | chr7_2:17038191-17038210 | Msa1050890:intron | 50.0% |
| !! | TGGTGGGTTGCATGAGGTAA+GGG | - | chr7_2:17038192-17038211 | Msa1050890:intron | 50.0% |
| GAGAGGAACCTGTGCATACT+AGG | - | chr7_2:17038226-17038245 | Msa1050890:intron | 50.0% | |
| GAGGAACCTGTGCATACTAG+GGG | - | chr7_2:17038228-17038247 | Msa1050890:intron | 50.0% | |
| CTAGGGGTGGTACAATTGAG+AGG | - | chr7_2:17038244-17038263 | Msa1050890:intron | 50.0% | |
| CCCAAACAGGCTCTACGAAT+AGG | + | chr7_2:17038382-17038401 | None:intergenic | 50.0% | |
| TATCTCACACCGCAACGCTA+TGG | + | chr7_2:17038639-17038658 | None:intergenic | 50.0% | |
| TGGGTTCCATAGTTCGAACC+CGG | - | chr7_2:17039592-17039611 | Msa1050890:CDS | 50.0% | |
| GATAACCCGGGTTCGAACTA+TGG | + | chr7_2:17039601-17039620 | None:intergenic | 50.0% | |
| ! | CCATGGCTGAGTGATGGTGA+TGG | + | chr7_2:17034574-17034593 | None:intergenic | 55.0% |
| CCATCACCATCACTCAGCCA+TGG | - | chr7_2:17034571-17034590 | Msa1050890:three_prime_UTR | 55.0% | |
| ATGGCCACGGATACAGATGG+AGG | - | chr7_2:17036010-17036029 | Msa1050890:intron | 55.0% | |
| TCCTCCTCCATCTGTATCCG+TGG | + | chr7_2:17036017-17036036 | None:intergenic | 55.0% | |
| ! | AAGATCTGTCGTGAGGGTGC+CGG | - | chr7_2:17036070-17036089 | Msa1050890:intron | 55.0% |
| ! | TTGAGGAGGAGCACACTCCA+AGG | + | chr7_2:17037958-17037977 | None:intergenic | 55.0% |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr7_2:17037957-17037976 | Msa1050890:intron | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | - | chr7_2:17037964-17037983 | Msa1050890:intron | 55.0% | |
| ! | TCTCCGGTGCCAATTTGGGT+GGG | - | chr7_2:17037995-17038014 | Msa1050890:intron | 55.0% |
| GAACCTGTGCATACTAGGGG+TGG | - | chr7_2:17038231-17038250 | Msa1050890:intron | 55.0% | |
| GTACCACCCCTAGTATGCAC+AGG | + | chr7_2:17038237-17038256 | None:intergenic | 55.0% | |
| CGCAACAAGCCATAGCGTTG+CGG | - | chr7_2:17038627-17038646 | Msa1050890:intron | 55.0% | |
| AGCGTTGCGGTGTGAGATAG+CGG | - | chr7_2:17038640-17038659 | Msa1050890:intron | 55.0% | |
| ! | GTGAGATAGCGGCGCTATAG+CGG | - | chr7_2:17038651-17038670 | Msa1050890:intron | 55.0% |
| GGGTTCCATAGTTCGAACCC+GGG | - | chr7_2:17039593-17039612 | Msa1050890:CDS | 55.0% | |
| GCCACGGATACAGATGGAGG+AGG | - | chr7_2:17036013-17036032 | Msa1050890:intron | 60.0% | |
| GACGCAGACGCAGTTACTGC+AGG | + | chr7_2:17036209-17036228 | None:intergenic | 60.0% | |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | - | chr7_2:17037938-17037957 | Msa1050890:intron | 60.0% |
| ! | GTCTCCGGTGCCAATTTGGG+TGG | - | chr7_2:17037994-17038013 | Msa1050890:intron | 60.0% |
| ! | CTCCGGTGCCAATTTGGGTG+GGG | - | chr7_2:17037996-17038015 | Msa1050890:intron | 60.0% |
| AGCCCCACCCAAATTGGCAC+CGG | + | chr7_2:17038001-17038020 | None:intergenic | 60.0% | |
| GGCCAATAGCGCCGCTATAG+CGG | - | chr7_2:17038573-17038592 | Msa1050890:intron | 60.0% | |
| !! | TGGCTTGTTGCGTAGCGCTC+CGG | + | chr7_2:17038619-17038638 | None:intergenic | 60.0% |
| GGTCCCAAGCCAACACCACC+AGG | + | chr7_2:17037937-17037956 | None:intergenic | 65.0% | |
| GGCCGCTATAGCGGCGCTAT+TGG | + | chr7_2:17038578-17038597 | None:intergenic | 65.0% | |
| AGCGGCGCAACGCTTCGTAG+CGG | - | chr7_2:17038669-17038688 | Msa1050890:intron | 65.0% | |
| TAGCAGCCGCTATCGCAGCG+TGG | - | chr7_2:17039671-17039690 | Msa1050890:exon | 65.0% | |
| ACCGCTCCACGCTGCGATAG+CGG | + | chr7_2:17039680-17039699 | None:intergenic | 65.0% | |
| !! | TGTCGTGAGGGTGCCGGCTC+TGG | - | chr7_2:17036076-17036095 | Msa1050890:intron | 70.0% |
| GCCGCTATCGCAGCGTGGAG+CGG | - | chr7_2:17039676-17039695 | Msa1050890:five_prime_UTR | 70.0% | |
| GCACCGCGCGGCCGCTATAG+CGG | + | chr7_2:17038587-17038606 | None:intergenic | 75.0% | |
| ! | GCGCCGCTATAGCGGCCGCG+CGG | - | chr7_2:17038581-17038600 | Msa1050890:intron | 80.0% |
| ! | AGCGGCCGCGCGGTGCAGTG+CGG | - | chr7_2:17038591-17038610 | Msa1050890:intron | 80.0% |
| ! | CGGCACCGCACTGCACCGCG+CGG | + | chr7_2:17038599-17038618 | None:intergenic | 80.0% |
| ! | CGCGCGGTGCAGTGCGGTGC+CGG | - | chr7_2:17038597-17038616 | Msa1050890:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 17034434 | 17039711 | 17034434 | ID=Msa1050890;Name=Msa1050890 |
| chr7_2 | mRNA | 17034434 | 17039711 | 17034434 | ID=Msa1050890-mRNA-1;Parent=Msa1050890;Name=Msa1050890-mRNA-1;_AED=0.06;_eAED=0.06;_QI=38|1|1|1|1|1|8|285|324 |
| chr7_2 | exon | 17034434 | 17034865 | 17034434 | ID=Msa1050890-mRNA-1:exon:3813;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17036567 | 17036653 | 17036567 | ID=Msa1050890-mRNA-1:exon:3812;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17036779 | 17036877 | 17036779 | ID=Msa1050890-mRNA-1:exon:3811;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17037394 | 17037553 | 17037394 | ID=Msa1050890-mRNA-1:exon:3810;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17037653 | 17037726 | 17037653 | ID=Msa1050890-mRNA-1:exon:3809;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17038009 | 17038159 | 17038009 | ID=Msa1050890-mRNA-1:exon:3808;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17039256 | 17039368 | 17039256 | ID=Msa1050890-mRNA-1:exon:3807;Parent=Msa1050890-mRNA-1 |
| chr7_2 | exon | 17039530 | 17039711 | 17039530 | ID=Msa1050890-mRNA-1:exon:3806;Parent=Msa1050890-mRNA-1 |
| chr7_2 | five_prime_UTR | 17039674 | 17039711 | 17039674 | ID=Msa1050890-mRNA-1:five_prime_utr;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17039530 | 17039673 | 17039530 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17039256 | 17039368 | 17039256 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17038009 | 17038159 | 17038009 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17037653 | 17037726 | 17037653 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17037394 | 17037553 | 17037394 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17036779 | 17036877 | 17036779 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17036567 | 17036653 | 17036567 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | CDS | 17034719 | 17034865 | 17034719 | ID=Msa1050890-mRNA-1:cds;Parent=Msa1050890-mRNA-1 |
| chr7_2 | three_prime_UTR | 17034434 | 17034718 | 17034434 | ID=Msa1050890-mRNA-1:three_prime_utr;Parent=Msa1050890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
