AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1421010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421010 MtrunA17_Chr8g0346891 85.927 1073 79 6 1 1002 52 1123 0.0 1783
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421010 AT3G61780.1 56.813 433 146 7 607 1002 626 1054 7.01e-152 480
Msa1421010 AT5G28400.1 47.554 368 136 8 607 969 550 865 2.57e-80 282
Msa1421010 AT5G28400.1 33.408 446 203 16 66 444 44 462 1.01e-45 179
Msa1421010 AT5G28320.1 50.397 252 69 4 664 911 559 758 5.77e-63 231
Msa1421010 AT5G28320.1 32.447 376 173 14 105 444 112 442 8.70e-34 140

Find 222 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTGATTTGTTTAATTAT+TGG 0.140144 tig0024906:-14960 None:intergenic
TATGACTTCACTCTCATTAT+AGG 0.163143 tig0024906:-14233 None:intergenic
GGATTGATTCCGAAGCTTTC+GGG 0.188701 tig0024906:+13779 Msa1421010:CDS
CAGAATCTTCACTAGGATTT+AGG 0.204385 tig0024906:-15022 None:intergenic
CTTCCTTCAACAACAGTCTT+TGG 0.207941 tig0024906:-16190 None:intergenic
TTTCGAGATGCTAAAGAAAA+TGG 0.211203 tig0024906:+17762 Msa1421010:CDS
TGAAATAGAGGATAAGATTT+TGG 0.218514 tig0024906:+13616 Msa1421010:CDS
TAAATATGAAATCAGATTCT+AGG 0.223247 tig0024906:+14994 Msa1421010:CDS
TCGATAATGAAGGGTGTATT+TGG 0.225172 tig0024906:+17926 Msa1421010:three_prime_UTR
TCGTCGTTCATCAAATAAAA+TGG 0.238549 tig0024906:-15434 None:intergenic
GAGTTGCTTCAATTGTTTAT+AGG 0.240263 tig0024906:+18539 Msa1421010:three_prime_UTR
GTTCGTGATGATAGAGAAAT+TGG 0.263066 tig0024906:+14397 Msa1421010:CDS
CTTGTAGTTCAGAATTCTTC+TGG 0.264665 tig0024906:+14076 Msa1421010:CDS
TACTATCACCATTAACTTCA+TGG 0.265220 tig0024906:-15148 None:intergenic
TGTTGAATAAATTGGAGAAT+TGG 0.274152 tig0024906:+13456 Msa1421010:CDS
TTTATCTAGGAATTCATTTA+GGG 0.278659 tig0024906:-16032 None:intergenic
TTCATTACAGACTTAACTTC+TGG 0.278920 tig0024906:-16316 None:intergenic
CTCCTCTGATAGACTTGCTT+TGG 0.280462 tig0024906:-14916 None:intergenic
TTTCTGGAAAGACAGAAAAT+TGG 0.287623 tig0024906:+15183 Msa1421010:CDS
CCTCCACTTCTTCTAGTGTT+TGG 0.299170 tig0024906:-17832 None:intergenic
TCCTTCCCATCCTTCTTCAC+TGG 0.299460 tig0024906:-16088 None:intergenic
TGGAAAGCAATCACGTGATA+TGG 0.300473 tig0024906:-17158 None:intergenic
TAATTATAGGCTCAACTTCA+TGG 0.305732 tig0024906:-15220 None:intergenic
GTCATAAATGAGCCATTAAT+AGG 0.315826 tig0024906:-14493 None:intergenic
TTACTACTAAACACCATTCT+TGG 0.326811 tig0024906:-18465 None:intergenic
TTCTCTAGTTAGTAAGGATA+TGG 0.326970 tig0024906:+14183 Msa1421010:CDS
GATGCTAAAGAAAATGGTTT+TGG 0.330623 tig0024906:+17768 Msa1421010:CDS
ACTTCAGACCATGAAGTTAA+TGG 0.337289 tig0024906:+15140 Msa1421010:CDS
CCTTCCCATCCTTCTTCACT+GGG 0.340053 tig0024906:-16087 None:intergenic
AATATTGAAAATATTGATTA+CGG 0.341308 tig0024906:+15545 Msa1421010:CDS
GAAGGATATCGGGAAGGATT+TGG 0.342571 tig0024906:+16336 Msa1421010:CDS
GGGATTGATTCCGAAGCTTT+CGG 0.342872 tig0024906:+13778 Msa1421010:CDS
GACCGTCAAGTTGATGGCTT+TGG 0.343100 tig0024906:+14891 Msa1421010:CDS
GAGAATGGATATGGACTATA+AGG 0.350527 tig0024906:+14105 Msa1421010:CDS
AATGAGTGCTCGAAGGATTC+TGG 0.355831 tig0024906:+14822 Msa1421010:CDS
GAAAATCCTGATGCAAAATC+TGG 0.356907 tig0024906:+14601 Msa1421010:CDS
GTTATTTCGTGTTGGTGATA+AGG 0.356931 tig0024906:+13853 Msa1421010:CDS
AGCAAAACAACGGATAATAA+TGG 0.363935 tig0024906:+14310 Msa1421010:CDS
TCTACGGAGACACCGGTTAT+AGG 0.365607 tig0024906:+13980 Msa1421010:CDS
AAGTCTGTAATGAAGGATAT+CGG 0.365693 tig0024906:+16325 Msa1421010:CDS
TTACATAATGCAGGCTCATA+TGG 0.367841 tig0024906:+17208 Msa1421010:CDS
GAGGAAGAGATTACAGAGAT+TGG 0.369392 tig0024906:+17851 Msa1421010:three_prime_UTR
GCTTTAGACCGTCAAGTTGA+TGG 0.371836 tig0024906:+14885 Msa1421010:CDS
GTTGAATAAATTGGAGAATT+GGG 0.374416 tig0024906:+13457 Msa1421010:CDS
GTGGCTAAGTTTATTGTTCA+AGG 0.375216 tig0024906:+13701 Msa1421010:CDS
GTAAAGGTTGATGGTTCAAT+AGG 0.379833 tig0024906:+16145 Msa1421010:CDS
TCTTCAAAAGTAAAGGTTGA+TGG 0.380593 tig0024906:+16136 Msa1421010:CDS
TTGATGTCACCGATCTTTGT+TGG 0.384210 tig0024906:-15068 None:intergenic
TATTTGAATGGAGCCATTCA+TGG 0.390352 tig0024906:-15526 None:intergenic
ACTGTTTATCAAGATTCATT+TGG 0.394359 tig0024906:+13536 Msa1421010:CDS
TGGTGAAGTGAGAATGGATA+TGG 0.394713 tig0024906:+14096 Msa1421010:CDS
AGCCAATAATTAAACAAATC+AGG 0.395596 tig0024906:+14958 Msa1421010:CDS
AAGAATGGTGTTTAGTAGTA+AGG 0.398136 tig0024906:+18467 Msa1421010:three_prime_UTR
CAGTGAATTGCGACGGTTGG+TGG 0.399835 tig0024906:-13279 None:intergenic
TCGTGGATTTATCGTGCAAC+CGG 0.402086 tig0024906:+13757 Msa1421010:CDS
TCCTTTCCTCTCATATTGAA+TGG 0.406044 tig0024906:+18511 Msa1421010:three_prime_UTR
ATTCATTTGGTGGTGTTAAG+AGG 0.406479 tig0024906:+13549 Msa1421010:CDS
TGATGTCACCGATCTTTGTT+GGG 0.407949 tig0024906:-15067 None:intergenic
TAGGAATTCATTTAGGGCCT+CGG 0.408048 tig0024906:-16026 None:intergenic
GAAAATATTGATTACGGAGC+AGG 0.410754 tig0024906:+15551 Msa1421010:CDS
TTATTGTCTTCTCTGTCCTT+CGG 0.415153 tig0024906:-14457 None:intergenic
TTCTGGTACGGAACCTGTAT+TGG 0.415192 tig0024906:+14839 Msa1421010:CDS
GATCAGAAGGATAAGAAATT+CGG 0.417448 tig0024906:+15044 Msa1421010:CDS
GAATTGGGTTGATAAGTATA+AGG 0.418103 tig0024906:+13472 Msa1421010:CDS
GATCCTTTGTTATCTTATCA+TGG 0.420352 tig0024906:-17886 None:intergenic
TGTTCAAGGTGAGGAGGAGA+AGG 0.421697 tig0024906:+13715 Msa1421010:CDS
TTAGGCTCCAATTCAAGATC+TGG 0.423863 tig0024906:-17134 None:intergenic
TGGAGGCTAAGAAGCTAGCT+AGG 0.424554 tig0024906:+13636 Msa1421010:CDS
GATAAAGATGCTTTCTTCAA+AGG 0.426692 tig0024906:+15458 Msa1421010:CDS
AGAAACAGAAGAAGGGTCAT+TGG 0.438257 tig0024906:-13348 None:intergenic
AAGCGGAAGTTGAAGTAATA+CGG 0.438713 tig0024906:+18244 Msa1421010:three_prime_UTR
AAGGATCATACGGTCTGTTA+AGG 0.442534 tig0024906:+14543 Msa1421010:CDS
ATCTCAGTTGGTATATCTAA+AGG 0.444572 tig0024906:-15302 None:intergenic
GGTTCGAGAAATCAGAGAAA+TGG 0.455075 tig0024906:+14126 Msa1421010:CDS
AACTTTCTCACCTCCATGAA+TGG 0.455193 tig0024906:+15513 Msa1421010:CDS
GGCACGGGAAATTGAAGGCG+GGG 0.455668 tig0024906:+14156 Msa1421010:CDS
AATCCAAAGACTGTTGTTGA+AGG 0.455993 tig0024906:+16187 Msa1421010:CDS
TCATTACAGACTTAACTTCT+GGG 0.459664 tig0024906:-16315 None:intergenic
AAAGACTCTGGTGTTGAACC+TGG 0.462159 tig0024906:+15089 Msa1421010:CDS
GAAATGGATGACAGTGTGAT+TGG 0.462283 tig0024906:+14205 Msa1421010:CDS
GTTTATCAAGATTCATTTGG+TGG 0.462608 tig0024906:+13539 Msa1421010:CDS
GATGGCTCCAGATCTTGAAT+TGG 0.466077 tig0024906:+17127 Msa1421010:CDS
CCAACTGAGATGGAATCAAT+TGG 0.467007 tig0024906:+15314 Msa1421010:CDS
GGAGATTCGGTATACAGAAA+TGG 0.467191 tig0024906:+13874 Msa1421010:CDS
GAGAATTTCTCCACCAAGAA+TGG 0.468506 tig0024906:+18452 Msa1421010:three_prime_UTR
TGGTGTACTGTCATCAAGAA+AGG 0.470498 tig0024906:+17788 Msa1421010:CDS
GGAGAAAGAGATGTTGATGA+AGG 0.470521 tig0024906:+13934 Msa1421010:CDS
AGTTAGTAAGGATATGGAAA+TGG 0.471596 tig0024906:+14189 Msa1421010:CDS
TTCTTCTGGTGAAGTGAGAA+TGG 0.472021 tig0024906:+14090 Msa1421010:CDS
CAGTGAAGATTCTAATCAAA+AGG 0.476148 tig0024906:+14776 Msa1421010:intron
TTAACAGACCGTATGATCCT+TGG 0.476893 tig0024906:-14541 None:intergenic
GAAACAGAAGAAGGGTCATT+GGG 0.478730 tig0024906:-13347 None:intergenic
AGGAATTCATTTAGGGCCTC+GGG 0.479191 tig0024906:-16025 None:intergenic
GTGATTGCTTTCCAAGATCC+TGG 0.482729 tig0024906:+17167 Msa1421010:CDS
ACGAAACTTCTATTCCTCTC+AGG 0.484827 tig0024906:-16415 None:intergenic
TTCATTTGGTGGTGTTAAGA+GGG 0.485782 tig0024906:+13550 Msa1421010:CDS
CGATTCATCTTCAAAAGTAA+AGG 0.486731 tig0024906:+16129 Msa1421010:CDS
CGTGGATTTATCGTGCAACC+GGG 0.486754 tig0024906:+13758 Msa1421010:CDS
AAATCTTTGTTACATAATGC+AGG 0.486887 tig0024906:+17199 Msa1421010:CDS
GCAATCACGTGATATGGTTT+AGG 0.488229 tig0024906:-17152 None:intergenic
GAGAAATGGCTAGGCGGGCA+CGG 0.494474 tig0024906:+14140 Msa1421010:CDS
AGAAGTTAAGTCTGTAATGA+AGG 0.495476 tig0024906:+16318 Msa1421010:CDS
GGATATAAACTCGATAATGA+AGG 0.496128 tig0024906:+17916 Msa1421010:three_prime_UTR
GGATCGTTCTCTAGTTAGTA+AGG 0.496795 tig0024906:+14177 Msa1421010:CDS
AGTCTGTAATGAAGGATATC+GGG 0.497599 tig0024906:+16326 Msa1421010:CDS
AGGCGGGCACGGGAAATTGA+AGG 0.498159 tig0024906:+14151 Msa1421010:CDS
TCAATTGGAGTTGGTGAAGA+TGG 0.498351 tig0024906:+15329 Msa1421010:CDS
ATTGGCAGCACACAAAGAAA+TGG 0.498516 tig0024906:+16254 Msa1421010:CDS
AAATTTGAACCCAGTGAAGA+AGG 0.502258 tig0024906:+16078 Msa1421010:CDS
GCAAAATCTGGAATTGAACT+TGG 0.505574 tig0024906:+14613 Msa1421010:CDS
GTGTTGGTGATAAGGAGATT+CGG 0.506663 tig0024906:+13861 Msa1421010:CDS
TGAAGTTATTCATGAATCTA+CGG 0.506906 tig0024906:+13964 Msa1421010:CDS
ATAATTAAGAAAATTAGAGC+TGG 0.508482 tig0024906:+15236 Msa1421010:CDS
AGTTGGTGGAAATGAAATAG+AGG 0.508615 tig0024906:+13604 Msa1421010:CDS
TGATAGAGAAATTGGTAAAG+AGG 0.511552 tig0024906:+14405 Msa1421010:CDS
TGGAAAGACAGAAAATTGGC+TGG 0.512086 tig0024906:+15187 Msa1421010:CDS
TGAGAGGAATAGAAGTTTCG+TGG 0.515414 tig0024906:+16417 Msa1421010:CDS
CATTATCGAGTTTATATCCA+CGG 0.515814 tig0024906:-17912 None:intergenic
AGAAATGGCTAGGCGGGCAC+GGG 0.517232 tig0024906:+14141 Msa1421010:CDS
CTACTAAACACCATTCTTGG+TGG 0.517370 tig0024906:-18462 None:intergenic
AGCTGTTCCTTATCCAACTC+CGG 0.518530 tig0024906:-14013 None:intergenic
AATCAGAGAAATGGCTAGGC+GGG 0.518930 tig0024906:+14135 Msa1421010:CDS
GTTCAAGGTGAGGAGGAGAA+GGG 0.519648 tig0024906:+13716 Msa1421010:CDS
ATCACGAACAATCTCATGCT+TGG 0.521101 tig0024906:-14383 None:intergenic
GAAGAAAATTATGATGAGGA+AGG 0.524338 tig0024906:+13898 Msa1421010:CDS
CAGGCTCATATGGATATGCT+TGG 0.524511 tig0024906:+17218 Msa1421010:CDS
CCAATTGATTCCATCTCAGT+TGG 0.527142 tig0024906:-15314 None:intergenic
AACCAAAGCCATCAACTTGA+CGG 0.527200 tig0024906:-14893 None:intergenic
CATATTGAAGAAATTGATGA+TGG 0.528232 tig0024906:+13377 Msa1421010:CDS
AAGATTCTAATCAAAAGGAA+AGG 0.529775 tig0024906:+14781 Msa1421010:CDS
TTGAACCCAGTGAAGAAGGA+TGG 0.531615 tig0024906:+16082 Msa1421010:CDS
AGTGAATTGCGACGGTTGGT+GGG 0.533971 tig0024906:-13278 None:intergenic
ATTCCATCATCTTCTTCAGC+CGG 0.535809 tig0024906:-18305 None:intergenic
TCTTCACTAGGATTTAGGTC+AGG 0.537081 tig0024906:-15017 None:intergenic
TTGACGGTCTAAAGCGGTCT+CGG 0.541663 tig0024906:-14877 None:intergenic
GCACACAAAGAAATGGTCCC+AGG 0.542438 tig0024906:+16261 Msa1421010:CDS
TTTATTCTGTCAGTGCATTG+AGG 0.542501 tig0024906:+17055 Msa1421010:intron
CAAGCTTCTTCATGATCACC+AGG 0.544082 tig0024906:+13307 Msa1421010:CDS
AAAAGAGAGATGGAGTCGTT+CGG 0.544682 tig0024906:+16460 Msa1421010:CDS
TGATTACTAGAAACAGAAGA+AGG 0.545033 tig0024906:-13356 None:intergenic
CAACAAGCTTAAAAGAGAGA+TGG 0.547712 tig0024906:+16450 Msa1421010:CDS
AGACCAAACACTAGAAGAAG+TGG 0.547935 tig0024906:+17829 Msa1421010:exon
TCGGGAAGGATTTGGATCGC+TGG 0.550838 tig0024906:+16344 Msa1421010:CDS
TTTAGATATACCAACTGAGA+TGG 0.554996 tig0024906:+15304 Msa1421010:CDS
GATTGATTCCGAAGCTTTCG+GGG 0.555002 tig0024906:+13780 Msa1421010:CDS
GCTCATATGGATATGCTTGG+AGG 0.555682 tig0024906:+17221 Msa1421010:CDS
CCCAGTGAAGAAGGATGGGA+AGG 0.558091 tig0024906:+16087 Msa1421010:CDS
ACGGTCTGTTAAGGAAGCTA+AGG 0.558154 tig0024906:+14552 Msa1421010:CDS
AGTGATGGTTCTGTTAAAGC+TGG 0.558418 tig0024906:+16211 Msa1421010:CDS
GAATGTGAATTCTACTTACC+TGG 0.559762 tig0024906:-13325 None:intergenic
TAGTGAAGATTCTGATCAGA+AGG 0.560531 tig0024906:+15031 Msa1421010:CDS
AAATGGATGACAGTGTGATT+GGG 0.560569 tig0024906:+14206 Msa1421010:CDS
GGGCACGGGAAATTGAAGGC+GGG 0.561004 tig0024906:+14155 Msa1421010:CDS
GAGGAAGGCAAAAGCTAGGA+AGG 0.562096 tig0024906:+13913 Msa1421010:CDS
GGAGGCTAAGAAGCTAGCTA+GGG 0.562101 tig0024906:+13637 Msa1421010:CDS
CGGGCACGGGAAATTGAAGG+CGG 0.562502 tig0024906:+14154 Msa1421010:CDS
TAAGTTTATTGTTCAAGGTG+AGG 0.564177 tig0024906:+13706 Msa1421010:CDS
AAACCGGCTGAAGAAGATGA+TGG 0.564192 tig0024906:+18302 Msa1421010:three_prime_UTR
GTGAAGAAGTTATTTCGTGT+TGG 0.565361 tig0024906:+13845 Msa1421010:CDS
ATCGGTGACATCAAAGACTC+TGG 0.567494 tig0024906:+15077 Msa1421010:CDS
CCTCAGTGAATTGCGACGGT+TGG 0.567571 tig0024906:-13282 None:intergenic
TGATGAGGAAGGCAAAAGCT+AGG 0.569500 tig0024906:+13909 Msa1421010:CDS
AAATTCGGCCCAACAAAGAT+CGG 0.571791 tig0024906:+15059 Msa1421010:CDS
TGAACCCAGTGAAGAAGGAT+GGG 0.571822 tig0024906:+16083 Msa1421010:CDS
GAGAAAGAGATGTTGATGAA+GGG 0.579923 tig0024906:+13935 Msa1421010:CDS
ATTGGAGTTGGTGAAGATGG+TGG 0.580295 tig0024906:+15332 Msa1421010:CDS
GTTTATTGTTCAAGGTGAGG+AGG 0.580520 tig0024906:+13709 Msa1421010:CDS
AGATTCTAATCAAAAGGAAA+GGG 0.581650 tig0024906:+14782 Msa1421010:CDS
TGGAGAACTTGACTGGATGC+AGG 0.581964 tig0024906:+15352 Msa1421010:CDS
AAAATCATACCACGGTGGAA+AGG 0.583759 tig0024906:+15983 Msa1421010:CDS
GATATAAACTCGATAATGAA+GGG 0.587239 tig0024906:+17917 Msa1421010:three_prime_UTR
AGTAATACGGAAGTAGATGA+TGG 0.589105 tig0024906:+18257 Msa1421010:three_prime_UTR
GAAAGCTTCGGAATCAATCC+CGG 0.597684 tig0024906:-13776 None:intergenic
TTCTGATGATATCACAGAGA+AGG 0.598224 tig0024906:+14348 Msa1421010:CDS
CATATGGATATGCTTGGAGG+TGG 0.598437 tig0024906:+17224 Msa1421010:CDS
TGGAGAAGAAAATTATGATG+AGG 0.598863 tig0024906:+13894 Msa1421010:CDS
CTAGCTAGGGAGATGGAGAG+TGG 0.600488 tig0024906:+13650 Msa1421010:CDS
CCAAACACTAGAAGAAGTGG+AGG 0.601894 tig0024906:+17832 Msa1421010:three_prime_UTR
ACTGTTGTTGAAGGAAGTGA+TGG 0.603699 tig0024906:+16196 Msa1421010:CDS
GCCATTCAATATGAGAGGAA+AGG 0.605839 tig0024906:-18512 None:intergenic
TGTTCCTCAGTGAATTGCGA+CGG 0.606179 tig0024906:-13286 None:intergenic
TCATGAATCTACGGAGACAC+CGG 0.610395 tig0024906:+13973 Msa1421010:CDS
CTAGTGCCATTCAATATGAG+AGG 0.612627 tig0024906:-18517 None:intergenic
ACAAGAAACCAAGGATCATA+CGG 0.613507 tig0024906:+14533 Msa1421010:CDS
GAGAAATCAGAGAAATGGCT+AGG 0.613725 tig0024906:+14131 Msa1421010:CDS
ATTAACTTCATGGTCTGAAG+TGG 0.613832 tig0024906:-15138 None:intergenic
TTCTGATCAGAATCTTCACT+AGG 0.614418 tig0024906:-15029 None:intergenic
TCTTAATATAAAGGTTTAAG+CGG 0.617527 tig0024906:+18227 Msa1421010:intron
AAGATGGTGGAGAACTTGAC+TGG 0.620066 tig0024906:+15345 Msa1421010:CDS
GAGATGGAATCAATTGGAGT+TGG 0.621041 tig0024906:+15320 Msa1421010:CDS
GTGGTGAAAATGTGATTGCA+AGG 0.622698 tig0024906:+13669 Msa1421010:CDS
CTCTGGTGTTGAACCTGGAG+TGG 0.624792 tig0024906:+15094 Msa1421010:CDS
GTGCTCGAAGGATTCTGGTA+CGG 0.626732 tig0024906:+14827 Msa1421010:CDS
TAAGAAGCTAGCTAGGGAGA+TGG 0.630468 tig0024906:+13643 Msa1421010:CDS
GATTACTAGAAACAGAAGAA+GGG 0.631443 tig0024906:-13355 None:intergenic
GACAAAGAATGAGTGCTCGA+AGG 0.633816 tig0024906:+14815 Msa1421010:CDS
GACGATGGAGAAGAAAGAGT+CGG 0.635070 tig0024906:+17089 Msa1421010:CDS
TTGAACTTGGAAAGAAAACA+TGG 0.635272 tig0024906:+14626 Msa1421010:CDS
AAGATGATGGAATTCTTGCA+TGG 0.638087 tig0024906:+18315 Msa1421010:three_prime_UTR
ATTGATTCCGAAGCTTTCGG+GGG 0.638623 tig0024906:+13781 Msa1421010:CDS
GTTCAGTGAACAAGAAACCA+AGG 0.638861 tig0024906:+14524 Msa1421010:CDS
TATTTACTAACTACTGCTTG+CGG 0.641619 tig0024906:-16484 None:intergenic
TGATGTTGCTATGACTCCGA+AGG 0.642481 tig0024906:+14441 Msa1421010:CDS
GATAACAAAGGATCGATCCG+TGG 0.648907 tig0024906:+17895 Msa1421010:three_prime_UTR
ATCAACTTGACGGTCTAAAG+CGG 0.652858 tig0024906:-14883 None:intergenic
GCCATTAATAGGAGTGCGCG+AGG 0.653474 tig0024906:-14482 None:intergenic
TTCCAAAGCAAGTCTATCAG+AGG 0.654421 tig0024906:+14914 Msa1421010:CDS
GAGGTATATAAAGTTGACGA+TGG 0.655145 tig0024906:+17074 Msa1421010:CDS
TGATGAGCAAATTACCTGAG+AGG 0.661501 tig0024906:+16401 Msa1421010:CDS
TGTAATGAAGGATATCGGGA+AGG 0.663055 tig0024906:+16330 Msa1421010:CDS
TGAAGTTGCAAGCAAAACAA+CGG 0.664436 tig0024906:+14300 Msa1421010:CDS
GTACCATGATAAGATAACAA+AGG 0.667121 tig0024906:+17883 Msa1421010:three_prime_UTR
GTTCGTGATAATGAATTGTG+TGG 0.675486 tig0024906:+15404 Msa1421010:CDS
AAATCAGAGAAATGGCTAGG+CGG 0.676663 tig0024906:+14134 Msa1421010:CDS
CTCCGTGGAGAAAATTCCCG+AGG 0.679170 tig0024906:+16009 Msa1421010:CDS
ACGGTGGAAAGGACCCTCCG+TGG 0.691327 tig0024906:+15994 Msa1421010:CDS
TTGAATGGAGCCATTCATGG+AGG 0.701381 tig0024906:-15523 None:intergenic
CACCAGAGAAAATCATACCA+CGG 0.706946 tig0024906:+15975 Msa1421010:CDS
GATTGCAAGGAATAGTTCTG+TGG 0.720745 tig0024906:+13682 Msa1421010:CDS
ACGGAGGGTCCTTTCCACCG+TGG 0.730661 tig0024906:-15992 None:intergenic
CAGAGAAAATCATACCACGG+TGG 0.784439 tig0024906:+15978 Msa1421010:CDS
CCAACCGTCGCAATTCACTG+AGG 0.794256 tig0024906:+13282 Msa1421010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTGAAAATATTGATTA+CGG + tig0024906:15545-15564 Msa1421010:CDS 10.0%
!!! TTATGTGTATTATATAATTT+TGG - tig0024906:15590-15609 None:intergenic 10.0%
!! AAATTTATGAATTTAAAAAC+GGG - tig0024906:17386-17405 None:intergenic 10.0%
!! CAAATTTATGAATTTAAAAA+CGG - tig0024906:17387-17406 None:intergenic 10.0%
!!! AATTAATGATTTCATTTTTA+TGG + tig0024906:18204-18223 Msa1421010:intron 10.0%
!!! AAATGTTTTGTTGAATAAAT+TGG + tig0024906:13448-13467 Msa1421010:CDS 15.0%
!!! CAATATTTTCAATATTTGAA+TGG - tig0024906:15541-15560 None:intergenic 15.0%
!!! TTTAAACTATTTCTAATTTG+TGG - tig0024906:16820-16839 None:intergenic 15.0%
!! ATTAGAAATAGTTTAAACAT+AGG + tig0024906:16823-16842 Msa1421010:intron 15.0%
!! AATTTATGAATTTAAAAACG+GGG - tig0024906:17385-17404 None:intergenic 15.0%
!!! CGTTTTTAAATTCATAAATT+TGG + tig0024906:17385-17404 Msa1421010:intron 15.0%
!!! ATGTTCACTATTTTATTATT+CGG - tig0024906:18120-18139 None:intergenic 15.0%
!!! TTTTTATGGTCTTAATATAA+AGG + tig0024906:18218-18237 Msa1421010:intron 15.0%
!! TCTTGATAAACAGTAAAAAT+AGG - tig0024906:13530-13549 None:intergenic 20.0%
!!! TTCCTGATTTGTTTAATTAT+TGG - tig0024906:14963-14982 None:intergenic 20.0%
!! TAAATATGAAATCAGATTCT+AGG + tig0024906:14994-15013 Msa1421010:CDS 20.0%
!!! GCTCTAATTTTCTTAATTAT+AGG - tig0024906:15236-15255 None:intergenic 20.0%
!! ATAATTAAGAAAATTAGAGC+TGG + tig0024906:15236-15255 Msa1421010:CDS 20.0%
!!! ATGTATTAATTCGTTCATTT+TGG + tig0024906:15763-15782 Msa1421010:intron 20.0%
!!! TGAACAATATTTTTTTCTAG+AGG + tig0024906:15847-15866 Msa1421010:intron 20.0%
!! TTTATCTAGGAATTCATTTA+GGG - tig0024906:16035-16054 None:intergenic 20.0%
!!! TTTTATCTAGGAATTCATTT+AGG - tig0024906:16036-16055 None:intergenic 20.0%
!!! TTGTCTTTCTTTTTTTATCT+AGG - tig0024906:16048-16067 None:intergenic 20.0%
!! ACTAGCAAAAATGAAATTAA+GGG + tig0024906:16597-16616 Msa1421010:intron 20.0%
!!! AACAGCTTATAGTTTTTTTT+TGG + tig0024906:16722-16741 Msa1421010:intron 20.0%
!!! ACAGCTTATAGTTTTTTTTT+GGG + tig0024906:16723-16742 Msa1421010:intron 20.0%
!! AGCATAAAATTTAATACCTT+GGG - tig0024906:17275-17294 None:intergenic 20.0%
!! TTAGTTCCATAAATCAATTT+AGG + tig0024906:17308-17327 Msa1421010:intron 20.0%
!!! TTTAAGCCTAAATTGATTTA+TGG - tig0024906:17317-17336 None:intergenic 20.0%
!! ATAAATCAATTTAGGCTTAA+AGG + tig0024906:17316-17335 Msa1421010:intron 20.0%
!! ATTTATGAATTTAAAAACGG+GGG - tig0024906:17384-17403 None:intergenic 20.0%
!! AAGAAAACTAGTATATTTGT+CGG + tig0024906:18152-18171 Msa1421010:intron 20.0%
!! TCTTAATATAAAGGTTTAAG+CGG + tig0024906:18227-18246 Msa1421010:intron 20.0%
!!! TGTTTTCTTTACACAAATTA+CGG + tig0024906:18365-18384 Msa1421010:three_prime_UTR 20.0%
! CATATTGAAGAAATTGATGA+TGG + tig0024906:13377-13396 Msa1421010:CDS 25.0%
!! ACTACAAAAATCTGAACTTT+TGG + tig0024906:13421-13440 Msa1421010:CDS 25.0%
!! CTACAAAAATCTGAACTTTT+GGG + tig0024906:13422-13441 Msa1421010:CDS 25.0%
! TGTTGAATAAATTGGAGAAT+TGG + tig0024906:13456-13475 Msa1421010:CDS 25.0%
! GTTGAATAAATTGGAGAATT+GGG + tig0024906:13457-13476 Msa1421010:CDS 25.0%
!!! ATAAGGAAGATGTTGATTTT+TGG + tig0024906:13489-13508 Msa1421010:CDS 25.0%
!!! TAAGGAAGATGTTGATTTTT+GGG + tig0024906:13490-13509 Msa1421010:CDS 25.0%
! ACTGTTTATCAAGATTCATT+TGG + tig0024906:13536-13555 Msa1421010:CDS 25.0%
!! TGAAATAGAGGATAAGATTT+TGG + tig0024906:13616-13635 Msa1421010:CDS 25.0%
!!! TGTGTTTTTGTTGTTATGTT+TGG + tig0024906:13821-13840 Msa1421010:CDS 25.0%
! TGAAGTTATTCATGAATCTA+CGG + tig0024906:13964-13983 Msa1421010:CDS 25.0%
! TTAAAAACAACAAATTCGGA+AGG - tig0024906:14663-14682 None:intergenic 25.0%
! GTCGTTAAAAACAACAAATT+CGG - tig0024906:14667-14686 None:intergenic 25.0%
! AAGATTCTAATCAAAAGGAA+AGG + tig0024906:14781-14800 Msa1421010:CDS 25.0%
! AGATTCTAATCAAAAGGAAA+GGG + tig0024906:14782-14801 Msa1421010:CDS 25.0%
! AGCCAATAATTAAACAAATC+AGG + tig0024906:14958-14977 Msa1421010:CDS 25.0%
!! AGTAGAAAGAAAAGATTTTC+TGG + tig0024906:15167-15186 Msa1421010:CDS 25.0%
! TTATCTACTAGTGTTAATTG+TGG + tig0024906:15814-15833 Msa1421010:intron 25.0%
!!! CTTTACTTTTGAAGATGAAT+CGG - tig0024906:16131-16150 None:intergenic 25.0%
! ACAAAGAAGAAGATTACTTA+TGG + tig0024906:16524-16543 Msa1421010:intron 25.0%
! AAAATACATACCAGAACATA+TGG - tig0024906:16562-16581 None:intergenic 25.0%
! CACTAGCAAAAATGAAATTA+AGG + tig0024906:16596-16615 Msa1421010:intron 25.0%
!!! ATTAATTTGTTCATCCAAAC+AGG + tig0024906:16882-16901 Msa1421010:intron 25.0%
!!! TTAATTTGTTCATCCAAACA+GGG + tig0024906:16883-16902 Msa1421010:intron 25.0%
!! GAAATCTGAAAAGTACATAA+AGG - tig0024906:16975-16994 None:intergenic 25.0%
! AAATCTTTGTTACATAATGC+AGG + tig0024906:17199-17218 Msa1421010:CDS 25.0%
! ATAAAATTTAATACCTTGGG+AGG - tig0024906:17272-17291 None:intergenic 25.0%
! GAGCATAAAATTTAATACCT+TGG - tig0024906:17276-17295 None:intergenic 25.0%
!! GGTATTAAATTTTATGCTCT+TGG + tig0024906:17277-17296 Msa1421010:intron 25.0%
! AATAGAAATGAGTTGTTAAG+TGG + tig0024906:17510-17529 Msa1421010:intron 25.0%
! ATAGAAATGAGTTGTTAAGT+GGG + tig0024906:17511-17530 Msa1421010:intron 25.0%
! AACAAAAAATATGTTCTAGC+AGG - tig0024906:17667-17686 None:intergenic 25.0%
! GATATAAACTCGATAATGAA+GGG + tig0024906:17917-17936 Msa1421010:three_prime_UTR 25.0%
GATTACTAGAAACAGAAGAA+GGG - tig0024906:13358-13377 None:intergenic 30.0%
TGATTACTAGAAACAGAAGA+AGG - tig0024906:13359-13378 None:intergenic 30.0%
!!! TGATGGTAGTTTTGTTGAAT+TGG + tig0024906:13394-13413 Msa1421010:CDS 30.0%
!! GAATTGGGTTGATAAGTATA+AGG + tig0024906:13472-13491 Msa1421010:CDS 30.0%
!!! AAGGAAGATGTTGATTTTTG+GGG + tig0024906:13491-13510 Msa1421010:CDS 30.0%
!!! ATGTTGATTTTTGGGGTATT+GGG + tig0024906:13498-13517 Msa1421010:CDS 30.0%
GTTTATCAAGATTCATTTGG+TGG + tig0024906:13539-13558 Msa1421010:CDS 30.0%
!! GATGAGATTTTGAAAAGAGT+TGG + tig0024906:13587-13606 Msa1421010:CDS 30.0%
! AATAGAGGATAAGATTTTGG+AGG + tig0024906:13619-13638 Msa1421010:CDS 30.0%
TAAGTTTATTGTTCAAGGTG+AGG + tig0024906:13706-13725 Msa1421010:CDS 30.0%
TGGAGAAGAAAATTATGATG+AGG + tig0024906:13894-13913 Msa1421010:CDS 30.0%
GAAGAAAATTATGATGAGGA+AGG + tig0024906:13898-13917 Msa1421010:CDS 30.0%
TTCTCTAGTTAGTAAGGATA+TGG + tig0024906:14183-14202 Msa1421010:CDS 30.0%
AGTTAGTAAGGATATGGAAA+TGG + tig0024906:14189-14208 Msa1421010:CDS 30.0%
TATGACTTCACTCTCATTAT+AGG - tig0024906:14236-14255 None:intergenic 30.0%
AGCAAAACAACGGATAATAA+TGG + tig0024906:14310-14329 Msa1421010:CDS 30.0%
TGATAGAGAAATTGGTAAAG+AGG + tig0024906:14405-14424 Msa1421010:CDS 30.0%
GTCATAAATGAGCCATTAAT+AGG - tig0024906:14496-14515 None:intergenic 30.0%
TTGAACTTGGAAAGAAAACA+TGG + tig0024906:14626-14645 Msa1421010:CDS 30.0%
!! CTTTTGATTAGAATCTTCAC+TGG - tig0024906:14778-14797 None:intergenic 30.0%
CAGTGAAGATTCTAATCAAA+AGG + tig0024906:14776-14795 Msa1421010:intron 30.0%
GATCAGAAGGATAAGAAATT+CGG + tig0024906:15044-15063 Msa1421010:CDS 30.0%
TACTATCACCATTAACTTCA+TGG - tig0024906:15151-15170 None:intergenic 30.0%
! TTTCTGGAAAGACAGAAAAT+TGG + tig0024906:15183-15202 Msa1421010:CDS 30.0%
TAATTATAGGCTCAACTTCA+TGG - tig0024906:15223-15242 None:intergenic 30.0%
! ATCTCAGTTGGTATATCTAA+AGG - tig0024906:15305-15324 None:intergenic 30.0%
TTTAGATATACCAACTGAGA+TGG + tig0024906:15304-15323 Msa1421010:CDS 30.0%
TCGTCGTTCATCAAATAAAA+TGG - tig0024906:15437-15456 None:intergenic 30.0%
GATAAAGATGCTTTCTTCAA+AGG + tig0024906:15458-15477 Msa1421010:CDS 30.0%
TACTTCTGTCCTTTATCATA+AGG + tig0024906:15703-15722 Msa1421010:intron 30.0%
GCTAAAAGACCTTATGATAA+AGG - tig0024906:15715-15734 None:intergenic 30.0%
TCTAGAGGATACTTATGTTT+AGG + tig0024906:15862-15881 Msa1421010:intron 30.0%
TATATACTAATGCCATCTAG+AGG - tig0024906:15950-15969 None:intergenic 30.0%
CGATTCATCTTCAAAAGTAA+AGG + tig0024906:16129-16148 Msa1421010:CDS 30.0%
TCTTCAAAAGTAAAGGTTGA+TGG + tig0024906:16136-16155 Msa1421010:CDS 30.0%
!!! GATTTTTTGACTTCTTCATC+GGG - tig0024906:16171-16190 None:intergenic 30.0%
!!! GGATTTTTTGACTTCTTCAT+CGG - tig0024906:16172-16191 None:intergenic 30.0%
TTAAAGCTGGCAAAAAATCA+GGG + tig0024906:16224-16243 Msa1421010:CDS 30.0%
AAAAATCAGGGAAGGAATAT+TGG + tig0024906:16236-16255 Msa1421010:CDS 30.0%
GTAACAATCCAAAAATTCCT+GGG - tig0024906:16281-16300 None:intergenic 30.0%
TGTAACAATCCAAAAATTCC+TGG - tig0024906:16282-16301 None:intergenic 30.0%
TCATTACAGACTTAACTTCT+GGG - tig0024906:16318-16337 None:intergenic 30.0%
TTCATTACAGACTTAACTTC+TGG - tig0024906:16319-16338 None:intergenic 30.0%
AGAAGTTAAGTCTGTAATGA+AGG + tig0024906:16318-16337 Msa1421010:CDS 30.0%
AAGTCTGTAATGAAGGATAT+CGG + tig0024906:16325-16344 Msa1421010:CDS 30.0%
TATTTACTAACTACTGCTTG+CGG - tig0024906:16487-16506 None:intergenic 30.0%
AAGAAGAAGATTACTTATGG+TGG + tig0024906:16527-16546 Msa1421010:intron 30.0%
! ATTTTTGCTAGTGAAACAGT+GGG - tig0024906:16589-16608 None:intergenic 30.0%
! AAAAGTACATAAAGGACAAG+TGG - tig0024906:16967-16986 None:intergenic 30.0%
AAGGATAAGTCAAATCTAGT+GGG - tig0024906:17003-17022 None:intergenic 30.0%
CATCAATGGTTAGAAAAAGA+AGG - tig0024906:17022-17041 None:intergenic 30.0%
ACAAATTCATTCAGCATCAA+TGG - tig0024906:17036-17055 None:intergenic 30.0%
! AAGAGTCGGATTTTATTCAT+TGG + tig0024906:17103-17122 Msa1421010:CDS 30.0%
AATCGTAAAAGAAGCAAAGT+AGG - tig0024906:17355-17374 None:intergenic 30.0%
! CTTTGCTTCTTTTACGATTT+TGG + tig0024906:17356-17375 Msa1421010:intron 30.0%
AGACACTTCGAAAATTGAAA+GGG - tig0024906:17412-17431 None:intergenic 30.0%
AAACTTGCATTAAATGTGAC+AGG + tig0024906:17734-17753 Msa1421010:intron 30.0%
TTTCGAGATGCTAAAGAAAA+TGG + tig0024906:17762-17781 Msa1421010:CDS 30.0%
! GATGCTAAAGAAAATGGTTT+TGG + tig0024906:17768-17787 Msa1421010:CDS 30.0%
GTACCATGATAAGATAACAA+AGG + tig0024906:17883-17902 Msa1421010:three_prime_UTR 30.0%
! GATCCTTTGTTATCTTATCA+TGG - tig0024906:17889-17908 None:intergenic 30.0%
CATTATCGAGTTTATATCCA+CGG - tig0024906:17915-17934 None:intergenic 30.0%
GGATATAAACTCGATAATGA+AGG + tig0024906:17916-17935 Msa1421010:three_prime_UTR 30.0%
!!! AAGGGTGTATTTGGTTTTAA+TGG + tig0024906:17935-17954 Msa1421010:three_prime_UTR 30.0%
!!! AGTAGTTTTATAATCAGCTG+TGG + tig0024906:17988-18007 Msa1421010:intron 30.0%
! CTATTTTCGAAGAATGAAAC+CGG + tig0024906:18286-18305 Msa1421010:three_prime_UTR 30.0%
TTACTACTAAACACCATTCT+TGG - tig0024906:18468-18487 None:intergenic 30.0%
AAGAATGGTGTTTAGTAGTA+AGG + tig0024906:18467-18486 Msa1421010:three_prime_UTR 30.0%
GAGTTGCTTCAATTGTTTAT+AGG + tig0024906:18539-18558 Msa1421010:three_prime_UTR 30.0%
GAATGTGAATTCTACTTACC+TGG - tig0024906:13328-13347 None:intergenic 35.0%
!!! GATGTTGATTTTTGGGGTAT+TGG + tig0024906:13497-13516 Msa1421010:CDS 35.0%
!! ATTCATTTGGTGGTGTTAAG+AGG + tig0024906:13549-13568 Msa1421010:CDS 35.0%
!! TTCATTTGGTGGTGTTAAGA+GGG + tig0024906:13550-13569 Msa1421010:CDS 35.0%
!! GAGATTTTGAAAAGAGTTGG+TGG + tig0024906:13590-13609 Msa1421010:CDS 35.0%
!! AGTTGGTGGAAATGAAATAG+AGG + tig0024906:13604-13623 Msa1421010:CDS 35.0%
GTGGCTAAGTTTATTGTTCA+AGG + tig0024906:13701-13720 Msa1421010:CDS 35.0%
! GTGAAGAAGTTATTTCGTGT+TGG + tig0024906:13845-13864 Msa1421010:CDS 35.0%
!! GTTATTTCGTGTTGGTGATA+AGG + tig0024906:13853-13872 Msa1421010:CDS 35.0%
! GAGAAAGAGATGTTGATGAA+GGG + tig0024906:13935-13954 Msa1421010:CDS 35.0%
!!! GGCTTTTTTACACCTATAAC+CGG - tig0024906:13995-14014 None:intergenic 35.0%
GGTTATAGGTGTAAAAAAGC+CGG + tig0024906:13994-14013 Msa1421010:CDS 35.0%
CTTGTAGTTCAGAATTCTTC+TGG + tig0024906:14076-14095 Msa1421010:CDS 35.0%
! GAGAATGGATATGGACTATA+AGG + tig0024906:14105-14124 Msa1421010:CDS 35.0%
AAATGGATGACAGTGTGATT+GGG + tig0024906:14206-14225 Msa1421010:CDS 35.0%
! TGCTTGCAACTTCATTTTGA+CGG - tig0024906:14294-14313 None:intergenic 35.0%
TGAAGTTGCAAGCAAAACAA+CGG + tig0024906:14300-14319 Msa1421010:CDS 35.0%
TTCTGATGATATCACAGAGA+AGG + tig0024906:14348-14367 Msa1421010:CDS 35.0%
GTTCGTGATGATAGAGAAAT+TGG + tig0024906:14397-14416 Msa1421010:CDS 35.0%
TTATTGTCTTCTCTGTCCTT+CGG - tig0024906:14460-14479 None:intergenic 35.0%
ACAAGAAACCAAGGATCATA+CGG + tig0024906:14533-14552 Msa1421010:CDS 35.0%
GAAAATCCTGATGCAAAATC+TGG + tig0024906:14601-14620 Msa1421010:CDS 35.0%
! TCAATTCCAGATTTTGCATC+AGG - tig0024906:14610-14629 None:intergenic 35.0%
! GCAAAATCTGGAATTGAACT+TGG + tig0024906:14613-14632 Msa1421010:CDS 35.0%
! TCTCCAAATTTTTCTGCTTC+TGG - tig0024906:14689-14708 None:intergenic 35.0%
TCCAGAAGTGACACATTAAA+TGG + tig0024906:14723-14742 Msa1421010:intron 35.0%
!! TCCATTTAATGTGTCACTTC+TGG - tig0024906:14727-14746 None:intergenic 35.0%
! TAGAATCTTCACTGGCATTT+TGG - tig0024906:14770-14789 None:intergenic 35.0%
!! TTTTGAAGGTCTTCCAATAC+AGG - tig0024906:14855-14874 None:intergenic 35.0%
CAGAATCTTCACTAGGATTT+AGG - tig0024906:15025-15044 None:intergenic 35.0%
TTCTGATCAGAATCTTCACT+AGG - tig0024906:15032-15051 None:intergenic 35.0%
TAGTGAAGATTCTGATCAGA+AGG + tig0024906:15031-15050 Msa1421010:CDS 35.0%
ATTAACTTCATGGTCTGAAG+TGG - tig0024906:15141-15160 None:intergenic 35.0%
ACTTCAGACCATGAAGTTAA+TGG + tig0024906:15140-15159 Msa1421010:CDS 35.0%
! GTTCGTGATAATGAATTGTG+TGG + tig0024906:15404-15423 Msa1421010:CDS 35.0%
TATTTGAATGGAGCCATTCA+TGG - tig0024906:15529-15548 None:intergenic 35.0%
! GAAAATATTGATTACGGAGC+AGG + tig0024906:15551-15570 Msa1421010:CDS 35.0%
TTGTCCTTTATTCCTCTAGA+TGG + tig0024906:15935-15954 Msa1421010:intron 35.0%
AATGCCATCTAGAGGAATAA+AGG - tig0024906:15942-15961 None:intergenic 35.0%
! CTTCACTGGGTTCAAATTTT+TGG - tig0024906:16077-16096 None:intergenic 35.0%
AAATTTGAACCCAGTGAAGA+AGG + tig0024906:16078-16097 Msa1421010:CDS 35.0%
!! GTAAAGGTTGATGGTTCAAT+AGG + tig0024906:16145-16164 Msa1421010:CDS 35.0%
AATCCAAAGACTGTTGTTGA+AGG + tig0024906:16187-16206 Msa1421010:CDS 35.0%
GTTAAAGCTGGCAAAAAATC+AGG + tig0024906:16223-16242 Msa1421010:CDS 35.0%
AGTCTGTAATGAAGGATATC+GGG + tig0024906:16326-16345 Msa1421010:CDS 35.0%
! CATCTCTCTTTTAAGCTTGT+TGG - tig0024906:16452-16471 None:intergenic 35.0%
CAACAAGCTTAAAAGAGAGA+TGG + tig0024906:16450-16469 Msa1421010:CDS 35.0%
GTTAGATCTTCCATATGTTC+TGG + tig0024906:16549-16568 Msa1421010:intron 35.0%
! TTTTTGCTAGTGAAACAGTG+GGG - tig0024906:16588-16607 None:intergenic 35.0%
! CATTTTTGCTAGTGAAACAG+TGG - tig0024906:16590-16609 None:intergenic 35.0%
TATGTATTCGAGAAGCTGTT+TGG + tig0024906:16654-16673 Msa1421010:intron 35.0%
ATGTATTCGAGAAGCTGTTT+GGG + tig0024906:16655-16674 Msa1421010:intron 35.0%
GAAGGATAAGTCAAATCTAG+TGG - tig0024906:17004-17023 None:intergenic 35.0%
TTTATTCTGTCAGTGCATTG+AGG + tig0024906:17055-17074 Msa1421010:intron 35.0%
GAGGTATATAAAGTTGACGA+TGG + tig0024906:17074-17093 Msa1421010:CDS 35.0%
! CGGATTTTATTCATTGGAGA+TGG + tig0024906:17109-17128 Msa1421010:CDS 35.0%
TTACATAATGCAGGCTCATA+TGG + tig0024906:17208-17227 Msa1421010:CDS 35.0%
CAGACACTTCGAAAATTGAA+AGG - tig0024906:17413-17432 None:intergenic 35.0%
GATATCAAACACCATCTATG+CGG - tig0024906:17540-17559 None:intergenic 35.0%
ACATGGTACTACTATCTAGA+TGG - tig0024906:17633-17652 None:intergenic 35.0%
! TCGATAATGAAGGGTGTATT+TGG + tig0024906:17926-17945 Msa1421010:three_prime_UTR 35.0%
!! GTTTTAATGGCTCTACTAAG+AGG + tig0024906:17948-17967 Msa1421010:three_prime_UTR 35.0%
AAGCGGAAGTTGAAGTAATA+CGG + tig0024906:18244-18263 Msa1421010:three_prime_UTR 35.0%
AGTAATACGGAAGTAGATGA+TGG + tig0024906:18257-18276 Msa1421010:three_prime_UTR 35.0%
!! AAGATGATGGAATTCTTGCA+TGG + tig0024906:18315-18334 Msa1421010:three_prime_UTR 35.0%
TCCTTTCCTCTCATATTGAA+TGG + tig0024906:18511-18530 Msa1421010:three_prime_UTR 35.0%
GAAACAGAAGAAGGGTCATT+GGG - tig0024906:13350-13369 None:intergenic 40.0%
AGAAACAGAAGAAGGGTCAT+TGG - tig0024906:13351-13370 None:intergenic 40.0%
GTGGTGAAAATGTGATTGCA+AGG + tig0024906:13669-13688 Msa1421010:CDS 40.0%
! GATTGCAAGGAATAGTTCTG+TGG + tig0024906:13682-13701 Msa1421010:CDS 40.0%
GTTTATTGTTCAAGGTGAGG+AGG + tig0024906:13709-13728 Msa1421010:CDS 40.0%
! GGAGAAGGGTGATTTTGTTA+AGG + tig0024906:13730-13749 Msa1421010:CDS 40.0%
! GATTTTGTTAAGGCTGTTCG+TGG + tig0024906:13740-13759 Msa1421010:CDS 40.0%
!! GTGTTGGTGATAAGGAGATT+CGG + tig0024906:13861-13880 Msa1421010:CDS 40.0%
! GGAGATTCGGTATACAGAAA+TGG + tig0024906:13874-13893 Msa1421010:CDS 40.0%
! GGAGAAAGAGATGTTGATGA+AGG + tig0024906:13934-13953 Msa1421010:CDS 40.0%
AAAAAAGCCGGAGTTGGATA+AGG + tig0024906:14006-14025 Msa1421010:CDS 40.0%
TTCTTCTGGTGAAGTGAGAA+TGG + tig0024906:14090-14109 Msa1421010:CDS 40.0%
TGGTGAAGTGAGAATGGATA+TGG + tig0024906:14096-14115 Msa1421010:CDS 40.0%
GGTTCGAGAAATCAGAGAAA+TGG + tig0024906:14126-14145 Msa1421010:CDS 40.0%
GAGAAATCAGAGAAATGGCT+AGG + tig0024906:14131-14150 Msa1421010:CDS 40.0%
AAATCAGAGAAATGGCTAGG+CGG + tig0024906:14134-14153 Msa1421010:CDS 40.0%
GGATCGTTCTCTAGTTAGTA+AGG + tig0024906:14177-14196 Msa1421010:CDS 40.0%
GAAATGGATGACAGTGTGAT+TGG + tig0024906:14205-14224 Msa1421010:CDS 40.0%
ATCACGAACAATCTCATGCT+TGG - tig0024906:14386-14405 None:intergenic 40.0%
GTTCAGTGAACAAGAAACCA+AGG + tig0024906:14524-14543 Msa1421010:CDS 40.0%
TTAACAGACCGTATGATCCT+TGG - tig0024906:14544-14563 None:intergenic 40.0%
AAGGATCATACGGTCTGTTA+AGG + tig0024906:14543-14562 Msa1421010:CDS 40.0%
CGACCAGAAGCAGAAAAATT+TGG + tig0024906:14683-14702 Msa1421010:intron 40.0%
!!! TCTTCACTGGCATTTTGGTT+GGG - tig0024906:14765-14784 None:intergenic 40.0%
!! ATCTTCACTGGCATTTTGGT+TGG - tig0024906:14766-14785 None:intergenic 40.0%
ATCAACTTGACGGTCTAAAG+CGG - tig0024906:14886-14905 None:intergenic 40.0%
AACCAAAGCCATCAACTTGA+CGG - tig0024906:14896-14915 None:intergenic 40.0%
TTCCAAAGCAAGTCTATCAG+AGG + tig0024906:14914-14933 Msa1421010:CDS 40.0%
TCTTCACTAGGATTTAGGTC+AGG - tig0024906:15020-15039 None:intergenic 40.0%
AAATTCGGCCCAACAAAGAT+CGG + tig0024906:15059-15078 Msa1421010:CDS 40.0%
TGATGTCACCGATCTTTGTT+GGG - tig0024906:15070-15089 None:intergenic 40.0%
TTGATGTCACCGATCTTTGT+TGG - tig0024906:15071-15090 None:intergenic 40.0%
! TTTTGACGAATTACCACTCC+AGG - tig0024906:15110-15129 None:intergenic 40.0%
TGGAAAGACAGAAAATTGGC+TGG + tig0024906:15187-15206 Msa1421010:CDS 40.0%
! CCAATTGATTCCATCTCAGT+TGG - tig0024906:15317-15336 None:intergenic 40.0%
CCAACTGAGATGGAATCAAT+TGG + tig0024906:15314-15333 Msa1421010:CDS 40.0%
GAGATGGAATCAATTGGAGT+TGG + tig0024906:15320-15339 Msa1421010:CDS 40.0%
!! TCAATTGGAGTTGGTGAAGA+TGG + tig0024906:15329-15348 Msa1421010:CDS 40.0%
AACTTTCTCACCTCCATGAA+TGG + tig0024906:15513-15532 Msa1421010:CDS 40.0%
CACCAGAGAAAATCATACCA+CGG + tig0024906:15975-15994 Msa1421010:CDS 40.0%
AAAATCATACCACGGTGGAA+AGG + tig0024906:15983-16002 Msa1421010:CDS 40.0%
! TAGGAATTCATTTAGGGCCT+CGG - tig0024906:16029-16048 None:intergenic 40.0%
!! CACTGGGTTCAAATTTTTGG+TGG - tig0024906:16074-16093 None:intergenic 40.0%
CTTCCTTCAACAACAGTCTT+TGG - tig0024906:16193-16212 None:intergenic 40.0%
ACTGTTGTTGAAGGAAGTGA+TGG + tig0024906:16196-16215 Msa1421010:CDS 40.0%
! AGTGATGGTTCTGTTAAAGC+TGG + tig0024906:16211-16230 Msa1421010:CDS 40.0%
ATTGGCAGCACACAAAGAAA+TGG + tig0024906:16254-16273 Msa1421010:CDS 40.0%
! GAAATGGTCCCAGGAATTTT+TGG + tig0024906:16270-16289 Msa1421010:CDS 40.0%
TGTAATGAAGGATATCGGGA+AGG + tig0024906:16330-16349 Msa1421010:CDS 40.0%
TGATGAGCAAATTACCTGAG+AGG + tig0024906:16401-16420 Msa1421010:CDS 40.0%
ACGAAACTTCTATTCCTCTC+AGG - tig0024906:16418-16437 None:intergenic 40.0%
TGAGAGGAATAGAAGTTTCG+TGG + tig0024906:16417-16436 Msa1421010:CDS 40.0%
AAAAGAGAGATGGAGTCGTT+CGG + tig0024906:16460-16479 Msa1421010:CDS 40.0%
! TTTTGCTAGTGAAACAGTGG+GGG - tig0024906:16587-16606 None:intergenic 40.0%
TCATACTTTGTAGCCCTGTT+TGG - tig0024906:16899-16918 None:intergenic 40.0%
!! TCGTTGAACGATAGTTTTGC+TGG + tig0024906:16934-16953 Msa1421010:intron 40.0%
AAGTCAAATCTAGTGGGAGA+GGG - tig0024906:16997-17016 None:intergenic 40.0%
TAAGTCAAATCTAGTGGGAG+AGG - tig0024906:16998-17017 None:intergenic 40.0%
TTAGGCTCCAATTCAAGATC+TGG - tig0024906:17137-17156 None:intergenic 40.0%
GCAATCACGTGATATGGTTT+AGG - tig0024906:17155-17174 None:intergenic 40.0%
TGGAAAGCAATCACGTGATA+TGG - tig0024906:17161-17180 None:intergenic 40.0%
! CAAAGATTTTTGCAGTCACC+AGG - tig0024906:17188-17207 None:intergenic 40.0%
CGTAAAAGAAGCAAAGTAGG+AGG - tig0024906:17352-17371 None:intergenic 40.0%
TGGTGTACTGTCATCAAGAA+AGG + tig0024906:17788-17807 Msa1421010:CDS 40.0%
AGACCAAACACTAGAAGAAG+TGG + tig0024906:17829-17848 Msa1421010:exon 40.0%
GAGGAAGAGATTACAGAGAT+TGG + tig0024906:17851-17870 Msa1421010:three_prime_UTR 40.0%
ATTCCATCATCTTCTTCAGC+CGG - tig0024906:18308-18327 None:intergenic 40.0%
GAGAATTTCTCCACCAAGAA+TGG + tig0024906:18452-18471 Msa1421010:three_prime_UTR 40.0%
CTACTAAACACCATTCTTGG+TGG - tig0024906:18465-18484 None:intergenic 40.0%
GCCATTCAATATGAGAGGAA+AGG - tig0024906:18515-18534 None:intergenic 40.0%
! CTAGTGCCATTCAATATGAG+AGG - tig0024906:18520-18539 None:intergenic 40.0%
TGTTCCTCAGTGAATTGCGA+CGG - tig0024906:13289-13308 None:intergenic 45.0%
CAAGCTTCTTCATGATCACC+AGG + tig0024906:13307-13326 Msa1421010:CDS 45.0%
TAAGAAGCTAGCTAGGGAGA+TGG + tig0024906:13643-13662 Msa1421010:CDS 45.0%
TCGTGGATTTATCGTGCAAC+CGG + tig0024906:13757-13776 Msa1421010:CDS 45.0%
GAAAGCTTCGGAATCAATCC+CGG - tig0024906:13779-13798 None:intergenic 45.0%
! GGGATTGATTCCGAAGCTTT+CGG + tig0024906:13778-13797 Msa1421010:CDS 45.0%
! GGATTGATTCCGAAGCTTTC+GGG + tig0024906:13779-13798 Msa1421010:CDS 45.0%
! GATTGATTCCGAAGCTTTCG+GGG + tig0024906:13780-13799 Msa1421010:CDS 45.0%
! ATTGATTCCGAAGCTTTCGG+GGG + tig0024906:13781-13800 Msa1421010:CDS 45.0%
TGATGAGGAAGGCAAAAGCT+AGG + tig0024906:13909-13928 Msa1421010:CDS 45.0%
TCATGAATCTACGGAGACAC+CGG + tig0024906:13973-13992 Msa1421010:CDS 45.0%
AGGTGTAAAAAAGCCGGAGT+TGG + tig0024906:14000-14019 Msa1421010:CDS 45.0%
AGCTGTTCCTTATCCAACTC+CGG - tig0024906:14016-14035 None:intergenic 45.0%
AATCAGAGAAATGGCTAGGC+GGG + tig0024906:14135-14154 Msa1421010:CDS 45.0%
TGATGTTGCTATGACTCCGA+AGG + tig0024906:14441-14460 Msa1421010:CDS 45.0%
ACGGTCTGTTAAGGAAGCTA+AGG + tig0024906:14552-14571 Msa1421010:CDS 45.0%
GACAAAGAATGAGTGCTCGA+AGG + tig0024906:14815-14834 Msa1421010:CDS 45.0%
AATGAGTGCTCGAAGGATTC+TGG + tig0024906:14822-14841 Msa1421010:CDS 45.0%
TTCTGGTACGGAACCTGTAT+TGG + tig0024906:14839-14858 Msa1421010:CDS 45.0%
!! GCTTTAGACCGTCAAGTTGA+TGG + tig0024906:14885-14904 Msa1421010:CDS 45.0%
! CTCCTCTGATAGACTTGCTT+TGG - tig0024906:14919-14938 None:intergenic 45.0%
ATCGGTGACATCAAAGACTC+TGG + tig0024906:15077-15096 Msa1421010:CDS 45.0%
! AAAGACTCTGGTGTTGAACC+TGG + tig0024906:15089-15108 Msa1421010:CDS 45.0%
!! ATTGGAGTTGGTGAAGATGG+TGG + tig0024906:15332-15351 Msa1421010:CDS 45.0%
!! AAGATGGTGGAGAACTTGAC+TGG + tig0024906:15345-15364 Msa1421010:CDS 45.0%
TTGAATGGAGCCATTCATGG+AGG - tig0024906:15526-15545 None:intergenic 45.0%
! CACCGTGGTATGATTTTCTC+TGG - tig0024906:15980-15999 None:intergenic 45.0%
CAGAGAAAATCATACCACGG+TGG + tig0024906:15978-15997 Msa1421010:CDS 45.0%
! AGGAATTCATTTAGGGCCTC+GGG - tig0024906:16028-16047 None:intergenic 45.0%
TTGAACCCAGTGAAGAAGGA+TGG + tig0024906:16082-16101 Msa1421010:CDS 45.0%
TGAACCCAGTGAAGAAGGAT+GGG + tig0024906:16083-16102 Msa1421010:CDS 45.0%
AGCTGGCAAAAAATCAGGGA+AGG + tig0024906:16228-16247 Msa1421010:CDS 45.0%
GAAGGATATCGGGAAGGATT+TGG + tig0024906:16336-16355 Msa1421010:CDS 45.0%
TTTGCTAGTGAAACAGTGGG+GGG - tig0024906:16586-16605 None:intergenic 45.0%
AAGCTTTCCTGGAGAGCTTA+TGG - tig0024906:16697-16716 None:intergenic 45.0%
TAAGCTCTCCAGGAAAGCTT+AGG + tig0024906:16697-16716 Msa1421010:intron 45.0%
!! GCTGTTTTCCTAAGCTTTCC+TGG - tig0024906:16708-16727 None:intergenic 45.0%
GACGATGGAGAAGAAAGAGT+CGG + tig0024906:17089-17108 Msa1421010:CDS 45.0%
GATGGCTCCAGATCTTGAAT+TGG + tig0024906:17127-17146 Msa1421010:CDS 45.0%
GTGATTGCTTTCCAAGATCC+TGG + tig0024906:17167-17186 Msa1421010:CDS 45.0%
! TTTTGCAGTCACCAGGATCT+TGG - tig0024906:17181-17200 None:intergenic 45.0%
CAGGCTCATATGGATATGCT+TGG + tig0024906:17218-17237 Msa1421010:CDS 45.0%
GCTCATATGGATATGCTTGG+AGG + tig0024906:17221-17240 Msa1421010:CDS 45.0%
CATATGGATATGCTTGGAGG+TGG + tig0024906:17224-17243 Msa1421010:CDS 45.0%
GCAATGCTTTCGTTGTTGCA+CGG + tig0024906:17246-17265 Msa1421010:intron 45.0%
TAAGTGGGAATCCGCATAGA+TGG + tig0024906:17526-17545 Msa1421010:intron 45.0%
TATGTTCTAGCAGGCAACTC+AGG - tig0024906:17658-17677 None:intergenic 45.0%
CCTCCACTTCTTCTAGTGTT+TGG - tig0024906:17835-17854 None:intergenic 45.0%
CCAAACACTAGAAGAAGTGG+AGG + tig0024906:17832-17851 Msa1421010:three_prime_UTR 45.0%
GATAACAAAGGATCGATCCG+TGG + tig0024906:17895-17914 Msa1421010:three_prime_UTR 45.0%
AAACCGGCTGAAGAAGATGA+TGG + tig0024906:18302-18321 Msa1421010:three_prime_UTR 45.0%
AGTGAATTGCGACGGTTGGT+GGG - tig0024906:13281-13300 None:intergenic 50.0%
TGGAGGCTAAGAAGCTAGCT+AGG + tig0024906:13636-13655 Msa1421010:CDS 50.0%
GGAGGCTAAGAAGCTAGCTA+GGG + tig0024906:13637-13656 Msa1421010:CDS 50.0%
TGTTCAAGGTGAGGAGGAGA+AGG + tig0024906:13715-13734 Msa1421010:CDS 50.0%
GTTCAAGGTGAGGAGGAGAA+GGG + tig0024906:13716-13735 Msa1421010:CDS 50.0%
CGTGGATTTATCGTGCAACC+GGG + tig0024906:13758-13777 Msa1421010:CDS 50.0%
GAGGAAGGCAAAAGCTAGGA+AGG + tig0024906:13913-13932 Msa1421010:CDS 50.0%
! TCTACGGAGACACCGGTTAT+AGG + tig0024906:13980-13999 Msa1421010:CDS 50.0%
TCCTCGCGCACTCCTATTAA+TGG + tig0024906:14481-14500 Msa1421010:CDS 50.0%
GTGCTCGAAGGATTCTGGTA+CGG + tig0024906:14827-14846 Msa1421010:CDS 50.0%
! AAGCGGTCTCGGACTTTTGA+AGG - tig0024906:14869-14888 None:intergenic 50.0%
! TTGACGGTCTAAAGCGGTCT+CGG - tig0024906:14880-14899 None:intergenic 50.0%
!! GACCGTCAAGTTGATGGCTT+TGG + tig0024906:14891-14910 Msa1421010:CDS 50.0%
TGGAGAACTTGACTGGATGC+AGG + tig0024906:15352-15371 Msa1421010:CDS 50.0%
! TCGGGAATTTTCTCCACGGA+GGG - tig0024906:16010-16029 None:intergenic 50.0%
CCTTCCCATCCTTCTTCACT+GGG - tig0024906:16090-16109 None:intergenic 50.0%
TCCTTCCCATCCTTCTTCAC+TGG - tig0024906:16091-16110 None:intergenic 50.0%
GCACACAAAGAAATGGTCCC+AGG + tig0024906:16261-16280 Msa1421010:CDS 50.0%
GACATGTCCATAAGCTCTCC+AGG + tig0024906:16687-16706 Msa1421010:intron 50.0%
CAGTGAATTGCGACGGTTGG+TGG - tig0024906:13282-13301 None:intergenic 55.0%
CCTCAGTGAATTGCGACGGT+TGG - tig0024906:13285-13304 None:intergenic 55.0%
CCAACCGTCGCAATTCACTG+AGG + tig0024906:13282-13301 Msa1421010:CDS 55.0%
CTAGCTAGGGAGATGGAGAG+TGG + tig0024906:13650-13669 Msa1421010:CDS 55.0%
ATTCCGAAGCTTTCGGGGGT+TGG + tig0024906:13785-13804 Msa1421010:CDS 55.0%
! GCCATTAATAGGAGTGCGCG+AGG - tig0024906:14485-14504 None:intergenic 55.0%
! CTCTGGTGTTGAACCTGGAG+TGG + tig0024906:15094-15113 Msa1421010:CDS 55.0%
! CTCGGGAATTTTCTCCACGG+AGG - tig0024906:16011-16030 None:intergenic 55.0%
CTCCGTGGAGAAAATTCCCG+AGG + tig0024906:16009-16028 Msa1421010:CDS 55.0%
! GGCCTCGGGAATTTTCTCCA+CGG - tig0024906:16014-16033 None:intergenic 55.0%
CCCAGTGAAGAAGGATGGGA+AGG + tig0024906:16087-16106 Msa1421010:CDS 55.0%
TCGGGAAGGATTTGGATCGC+TGG + tig0024906:16344-16363 Msa1421010:CDS 55.0%
AGCAGGCAACTCAGGTGACA+TGG - tig0024906:17650-17669 None:intergenic 55.0%
CCACCAACCCCCGAAAGCTT+CGG - tig0024906:13791-13810 None:intergenic 60.0%
GAGAAATGGCTAGGCGGGCA+CGG + tig0024906:14140-14159 Msa1421010:CDS 60.0%
AGAAATGGCTAGGCGGGCAC+GGG + tig0024906:14141-14160 Msa1421010:CDS 60.0%
AGGCGGGCACGGGAAATTGA+AGG + tig0024906:14151-14170 Msa1421010:CDS 60.0%
CGGGCACGGGAAATTGAAGG+CGG + tig0024906:14154-14173 Msa1421010:CDS 60.0%
GGGCACGGGAAATTGAAGGC+GGG + tig0024906:14155-14174 Msa1421010:CDS 60.0%
GGCACGGGAAATTGAAGGCG+GGG + tig0024906:14156-14175 Msa1421010:CDS 60.0%
CCGAAGCTTTCGGGGGTTGG+TGG + tig0024906:13788-13807 Msa1421010:CDS 65.0%
ACGGAGGGTCCTTTCCACCG+TGG - tig0024906:15995-16014 None:intergenic 65.0%
ACGGTGGAAAGGACCCTCCG+TGG + tig0024906:15994-16013 Msa1421010:CDS 65.0%
CGTTGTTGCACGGCCTCCCA+AGG + tig0024906:17256-17275 Msa1421010:intron 65.0%
Chromosome Type Strat End Strand Name
tig0024906 gene 13260 18591 13260 ID=Msa1421010;Name=Msa1421010
tig0024906 mRNA 13260 18591 13260 ID=Msa1421010-mRNA-1;Parent=Msa1421010;Name=Msa1421010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.4|0.33|1|0.8|0.66|6|491|1003
tig0024906 exon 13260 14671 13260 ID=Msa1421010-mRNA-1:exon:1870;Parent=Msa1421010-mRNA-1
tig0024906 exon 14779 15572 14779 ID=Msa1421010-mRNA-1:exon:1871;Parent=Msa1421010-mRNA-1
tig0024906 exon 15954 16495 15954 ID=Msa1421010-mRNA-1:exon:1872;Parent=Msa1421010-mRNA-1
tig0024906 exon 17068 17256 17068 ID=Msa1421010-mRNA-1:exon:1873;Parent=Msa1421010-mRNA-1
tig0024906 exon 17756 17969 17756 ID=Msa1421010-mRNA-1:exon:1874;Parent=Msa1421010-mRNA-1
tig0024906 exon 18240 18591 18240 ID=Msa1421010-mRNA-1:exon:1875;Parent=Msa1421010-mRNA-1
tig0024906 CDS 13260 14671 13260 ID=Msa1421010-mRNA-1:cds;Parent=Msa1421010-mRNA-1
tig0024906 CDS 14779 15572 14779 ID=Msa1421010-mRNA-1:cds;Parent=Msa1421010-mRNA-1
tig0024906 CDS 15954 16495 15954 ID=Msa1421010-mRNA-1:cds;Parent=Msa1421010-mRNA-1
tig0024906 CDS 17068 17256 17068 ID=Msa1421010-mRNA-1:cds;Parent=Msa1421010-mRNA-1
tig0024906 CDS 17756 17830 17756 ID=Msa1421010-mRNA-1:cds;Parent=Msa1421010-mRNA-1
tig0024906 three_prime_UTR 17831 17969 17831 ID=Msa1421010-mRNA-1:three_prime_utr;Parent=Msa1421010-mRNA-1
tig0024906 three_prime_UTR 18240 18591 18240 ID=Msa1421010-mRNA-1:three_prime_utr;Parent=Msa1421010-mRNA-1
Gene Sequence

>Msa1421010

TTGGCTCATTTTCGACGACCCACCAACCGTCGCAATTCACTGAGGAACAAGCTTCTTCATGATCACCAGGTAAGTAGAATTCACATTCCCAATGACCCTTCTTCTGTTTCTAGTAATCATATTGAAGAAATTGATGATGGTAGTTTTGTTGAATTGGAAAAACTACAAAAATCTGAACTTTTGGGTGAAAATGTTTTGTTGAATAAATTGGAGAATTGGGTTGATAAGTATAAGGAAGATGTTGATTTTTGGGGTATTGGGTCTGCTCCTATTTTTACTGTTTATCAAGATTCATTTGGTGGTGTTAAGAGGGTTTTAGTTGATGAAGATGAGATTTTGAAAAGAGTTGGTGGAAATGAAATAGAGGATAAGATTTTGGAGGCTAAGAAGCTAGCTAGGGAGATGGAGAGTGGTGAAAATGTGATTGCAAGGAATAGTTCTGTGGCTAAGTTTATTGTTCAAGGTGAGGAGGAGAAGGGTGATTTTGTTAAGGCTGTTCGTGGATTTATCGTGCAACCGGGATTGATTCCGAAGCTTTCGGGGGTTGGTGGCATAGTATTGTGTGTTTTTGTTGTTATGTTTGGAGTGAAGAAGTTATTTCGTGTTGGTGATAAGGAGATTCGGTATACAGAAATGGAGAAGAAAATTATGATGAGGAAGGCAAAAGCTAGGAAGGAGAAAGAGATGTTGATGAAGGGTGCTATTGAAGTTATTCATGAATCTACGGAGACACCGGTTATAGGTGTAAAAAAGCCGGAGTTGGATAAGGAACAGCTTATGAACAATATTCTAAAAGCTAAGACTTCTTCTGATAAACTTGTAGTTCAGAATTCTTCTGGTGAAGTGAGAATGGATATGGACTATAAGGTTCGAGAAATCAGAGAAATGGCTAGGCGGGCACGGGAAATTGAAGGCGGGGATCGTTCTCTAGTTAGTAAGGATATGGAAATGGATGACAGTGTGATTGGGAAGTCCTATAATGAGAGTGAAGTCATAAAAGAGAATAGCAAACAAGATAACAGTTTAAGTAACCGTCAAAATGAAGTTGCAAGCAAAACAACGGATAATAATGGAATTCTGCACACAACTTCTGATGATATCACAGAGAAGGTTGATATTTCAACCAAGCATGAGATTGTTCGTGATGATAGAGAAATTGGTAAAGAGGAAATCAAAATCAATGATGTTGCTATGACTCCGAAGGACAGAGAAGACAATAAATCCTCGCGCACTCCTATTAATGGCTCATTTATGACAAATAAAAGTTCAGTGAACAAGAAACCAAGGATCATACGGTCTGTTAAGGAAGCTAAGGATTATCTTTCAAAAAAACACGACAAAGAAAATCCTGATGCAAAATCTGGAATTGAACTTGGAAAGAAAACATGGCTGATTCAAAGCCTTCCGAATTTTGAAGATTCTAATCAAAAGGAAAGGGAAAAGAGCTCGACAAAGAATGAGTGCTCGAAGGATTCTGGTACGGAACCTGTATTGGAAGACCTTCAAAAGTCCGAGACCGCTTTAGACCGTCAAGTTGATGGCTTTGGTTCCAAAGCAAGTCTATCAGAGGAGAAAAGCTTCACTGAAGTTGAGCCAATAATTAAACAAATCAGGAATGATGATACTTTAAATATGAAATCAGATTCTAGGCCTGACCTAAATCCTAGTGAAGATTCTGATCAGAAGGATAAGAAATTCGGCCCAACAAAGATCGGTGACATCAAAGACTCTGGTGTTGAACCTGGAGTGGTAATTCGTCAAAATTCTGAGACCACTTCAGACCATGAAGTTAATGGTGATAGTAGAAAGAAAAGATTTTCTGGAAAGACAGAAAATTGGCTGGAGAAAAATTTCCATGAAGTTGAGCCTATAATTAAGAAAATTAGAGCTGGATTTCAAGATAACTATGCACTTGCAAAAGAGAGAGTTGATCAACCTTTAGATATACCAACTGAGATGGAATCAATTGGAGTTGGTGAAGATGGTGGAGAACTTGACTGGATGCAGGATGATCATCTTAGAGACATTGTCTTTCGAGTTCGTGATAATGAATTGTGTGGACGAGAACCATTTTATTTGATGAACGACGAAGATAAAGATGCTTTCTTCAAAGGTCTTGAGAAAAAAGTTGACATAGAAAACAAAAAACTTTCTCACCTCCATGAATGGCTCCATTCAAATATTGAAAATATTGATTACGGAGCAGATGGCATTAGTATATATGATTCACCAGAGAAAATCATACCACGGTGGAAAGGACCCTCCGTGGAGAAAATTCCCGAGGCCCTAAATGAATTCCTAGATAAAAAAAGAAAGACAACTTCCACCAAAAATTTGAACCCAGTGAAGAAGGATGGGAAGGACTCTGCTAAAAAATCATCCGATTCATCTTCAAAAGTAAAGGTTGATGGTTCAATAGGCCCGATGAAGAAGTCAAAAAATCCAAAGACTGTTGTTGAAGGAAGTGATGGTTCTGTTAAAGCTGGCAAAAAATCAGGGAAGGAATATTGGCAGCACACAAAGAAATGGTCCCAGGAATTTTTGGATTGTTACAATGCTGAGACAGACCCAGAAGTTAAGTCTGTAATGAAGGATATCGGGAAGGATTTGGATCGCTGGATCACTGAAAAAGAAATAGAGAAAGCAGCTGATCTGATGAGCAAATTACCTGAGAGGAATAGAAGTTTCGTGGAAAAGAAAACCAACAAGCTTAAAAGAGAGATGGAGTCGTTCGGACCGCAAGCAGTATGCATTGAGGTATATAAAGTTGACGATGGAGAAGAAAGAGTCGGATTTTATTCATTGGAGATGGCTCCAGATCTTGAATTGGAGCCTAAACCATATCACGTGATTGCTTTCCAAGATCCTGGTGACTGCAAAAATCTTTGTTACATAATGCAGGCTCATATGGATATGCTTGGAGGTGGCAATGCTTTCGATGCTTTTCGAGATGCTAAAGAAAATGGTTTTGGTGTACTGTCATCAAGAAAGGAGAACTTCAGCTTAATATAG
Protein sequence

>Msa1421010

LAHFRRPTNRRNSLRNKLLHDHQVSRIHIPNDPSSVSSNHIEEIDDGSFVELEKLQKSELLGENVLLNKLENWVDKYKEDVDFWGIGSAPIFTVYQDSFGGVKRVLVDEDEILKRVGGNEIEDKILEAKKLAREMESGENVIARNSSVAKFIVQGEEEKGDFVKAVRGFIVQPGLIPKLSGVGGIVLCVFVVMFGVKKLFRVGDKEIRYTEMEKKIMMRKAKARKEKEMLMKGAIEVIHESTETPVIGVKKPELDKEQLMNNILKAKTSSDKLVVQNSSGEVRMDMDYKVREIREMARRAREIEGGDRSLVSKDMEMDDSVIGKSYNESEVIKENSKQDNSLSNRQNEVASKTTDNNGILHTTSDDITEKVDISTKHEIVRDDREIGKEEIKINDVAMTPKDREDNKSSRTPINGSFMTNKSSVNKKPRIIRSVKEAKDYLSKKHDKENPDAKSGIELGKKTWLIQSLPNFEDSNQKEREKSSTKNECSKDSGTEPVLEDLQKSETALDRQVDGFGSKASLSEEKSFTEVEPIIKQIRNDDTLNMKSDSRPDLNPSEDSDQKDKKFGPTKIGDIKDSGVEPGVVIRQNSETTSDHEVNGDSRKKRFSGKTENWLEKNFHEVEPIIKKIRAGFQDNYALAKERVDQPLDIPTEMESIGVGEDGGELDWMQDDHLRDIVFRVRDNELCGREPFYLMNDEDKDAFFKGLEKKVDIENKKLSHLHEWLHSNIENIDYGADGISIYDSPEKIIPRWKGPSVEKIPEALNEFLDKKRKTTSTKNLNPVKKDGKDSAKKSSDSSSKVKVDGSIGPMKKSKNPKTVVEGSDGSVKAGKKSGKEYWQHTKKWSQEFLDCYNAETDPEVKSVMKDIGKDLDRWITEKEIEKAADLMSKLPERNRSFVEKKTNKLKREMESFGPQAVCIEVYKVDDGEERVGFYSLEMAPDLELEPKPYHVIAFQDPGDCKNLCYIMQAHMDMLGGGNAFDAFRDAKENGFGVLSSRKENFSLI*