Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051550 | XP_013447725.1 | 98.371 | 307 | 5 | 0 | 1 | 307 | 1 | 307 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051550 | A0A072U7J6 | 98.371 | 307 | 5 | 0 | 1 | 307 | 1 | 307 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0691980 | Msa1051550 | 0.802501 | 5.443643e-49 | -8.615850e-47 |
| Msa0754520 | Msa1051550 | 0.815360 | 9.623170e-52 | -8.615850e-47 |
| Msa0833220 | Msa1051550 | 0.813292 | 2.755537e-51 | -8.615850e-47 |
| Msa1010000 | Msa1051550 | 0.806903 | 6.562384e-50 | -8.615850e-47 |
| Msa1051550 | Msa1097640 | 0.854916 | 8.945984e-62 | -8.615850e-47 |
| Msa1051550 | Msa1139810 | 0.827544 | 1.475242e-54 | -8.615850e-47 |
| Msa1051550 | Msa1253310 | 0.817034 | 4.064074e-52 | -8.615850e-47 |
| Msa1051550 | Msa1323670 | 0.810667 | 1.028725e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051550 | MtrunA17_Chr7g0220871 | 98.371 | 307 | 5 | 0 | 1 | 307 | 1 | 307 | 0.0 | 617 |
| Msa1051550 | MtrunA17_Chr6g0457141 | 62.951 | 305 | 97 | 8 | 9 | 307 | 11 | 305 | 9.01e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051550 | AT5G16030.4 | 54.902 | 255 | 88 | 9 | 14 | 245 | 4 | 254 | 8.00e-73 | 225 |
| Msa1051550 | AT5G16030.1 | 55.159 | 252 | 86 | 9 | 14 | 242 | 4 | 251 | 1.55e-70 | 222 |
| Msa1051550 | AT5G16030.3 | 53.462 | 260 | 86 | 9 | 14 | 242 | 4 | 259 | 2.42e-69 | 219 |
| Msa1051550 | AT5G16030.2 | 54.941 | 253 | 86 | 10 | 14 | 242 | 4 | 252 | 7.14e-69 | 218 |
| Msa1051550 | AT3G02500.1 | 47.244 | 254 | 110 | 8 | 14 | 254 | 4 | 246 | 1.53e-60 | 195 |
| Msa1051550 | AT3G02500.3 | 46.667 | 255 | 111 | 8 | 14 | 254 | 4 | 247 | 3.38e-60 | 194 |
| Msa1051550 | AT3G02500.2 | 42.913 | 254 | 106 | 9 | 14 | 254 | 4 | 231 | 6.75e-48 | 162 |
| Msa1051550 | AT5G16030.5 | 52.761 | 163 | 56 | 6 | 98 | 242 | 2 | 161 | 1.39e-37 | 134 |
Find 75 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTAATGTACCTTTAAA+AGG | 0.181978 | 7_2:-18840389 | None:intergenic |
| TCTTTCACCACTGCCCTTAA+AGG | 0.188324 | 7_2:+18840520 | Msa1051550:CDS |
| AAAGAAAATGTAATAATTAA+AGG | 0.217046 | 7_2:+18844885 | Msa1051550:exon |
| TTCCATTCCTTTCTTGATCT+TGG | 0.233615 | 7_2:-18845032 | None:intergenic |
| TATATATGCAATCCACTTTC+AGG | 0.234776 | 7_2:+18840921 | Msa1051550:CDS |
| GAATTTAATGCAAACCCTTC+TGG | 0.264923 | 7_2:-18840876 | None:intergenic |
| TGTGTGACTCTTCTGAATTT+TGG | 0.266040 | 7_2:-18839970 | None:intergenic |
| ATTTGTAGAGGTTTGAAAAT+AGG | 0.266378 | 7_2:-18840108 | None:intergenic |
| ATCTCTTCTTCTTGAACTAT+AGG | 0.274819 | 7_2:-18840198 | None:intergenic |
| TTGTCTTGAAAAGAAATTAT+AGG | 0.275895 | 7_2:-18840032 | None:intergenic |
| TCTCTTCTTCTTGAACTATA+GGG | 0.297403 | 7_2:-18840197 | None:intergenic |
| AAGCAACTTTGCAAGCAAAT+AGG | 0.298807 | 7_2:+18844761 | Msa1051550:CDS |
| TTGAGTTCATAACTCATTCA+TGG | 0.306645 | 7_2:+18840154 | Msa1051550:exon |
| AAAATTAATATTACCTTTAA+GGG | 0.307677 | 7_2:-18840533 | None:intergenic |
| TCTCTTAAATTTCCAATTCC+AGG | 0.312931 | 7_2:+18841092 | Msa1051550:CDS |
| ATAGAAAAGTCAAGAGGAAT+TGG | 0.339726 | 7_2:+18845212 | Msa1051550:three_prime_UTR |
| AACAATTCTAGAAGGTATTC+AGG | 0.354558 | 7_2:+18840281 | Msa1051550:CDS |
| AAAGCATATGAACCTGGAAT+TGG | 0.366715 | 7_2:-18841104 | None:intergenic |
| TGTTTAGAGAAGTTTAATTT+CGG | 0.382507 | 7_2:+18845002 | Msa1051550:three_prime_UTR |
| TCTTCATGTGTGTAAATTGA+TGG | 0.384210 | 7_2:-18841065 | None:intergenic |
| AGCAACTTTGCAAGCAAATA+GGG | 0.387007 | 7_2:+18844762 | Msa1051550:CDS |
| GGGATATGATTCAGCATTGT+AGG | 0.390690 | 7_2:-18840177 | None:intergenic |
| AAGAAAATGTAATAATTAAA+GGG | 0.415042 | 7_2:+18844886 | Msa1051550:exon |
| ACACTCTCTTCTTAGAACTT+TGG | 0.443499 | 7_2:+18840000 | Msa1051550:five_prime_UTR |
| GAGTAGGTTTGAATGAATGA+TGG | 0.459123 | 7_2:+18844910 | Msa1051550:three_prime_UTR |
| TGAAGAAGCAGTACTAGAAA+TGG | 0.463289 | 7_2:-18840357 | None:intergenic |
| TGCCAACGTGAATACTTTGT+TGG | 0.463968 | 7_2:-18845093 | None:intergenic |
| TTGGAATTATGATCAATAGA+AGG | 0.467251 | 7_2:+18845231 | Msa1051550:three_prime_UTR |
| AATATTACCTTTAAGGGCAG+TGG | 0.469379 | 7_2:-18840527 | None:intergenic |
| AGAGTAACAACAATTCTAGA+AGG | 0.470000 | 7_2:+18840273 | Msa1051550:CDS |
| TCTAGTACTGCTTCTTCACC+TGG | 0.472912 | 7_2:+18840362 | Msa1051550:CDS |
| GTAATAATTAAAGGGAGAGT+AGG | 0.473203 | 7_2:+18844894 | Msa1051550:three_prime_UTR |
| AGAGGTTTGAAAATAGGTGT+TGG | 0.489540 | 7_2:-18840102 | None:intergenic |
| ATGATGGATGGAGTTGAAGT+AGG | 0.491118 | 7_2:-18841518 | None:intergenic |
| ATTGGTACCTCTCCTGAAAG+TGG | 0.491756 | 7_2:-18840933 | None:intergenic |
| CAAGGGTAAGCTATAACAGT+TGG | 0.503145 | 7_2:+18840841 | Msa1051550:CDS |
| TTTGCTGATAAACATTCCAT+TGG | 0.503270 | 7_2:-18840951 | None:intergenic |
| AAAGTAATGTACCTTTAAAA+GGG | 0.508301 | 7_2:-18840388 | None:intergenic |
| AGAGGGAATGACAAGAGATG+TGG | 0.508546 | 7_2:+18841451 | Msa1051550:CDS |
| GTACCTTTAAAAGGGTATCC+AGG | 0.521359 | 7_2:-18840380 | None:intergenic |
| TTTAACCTCTCTATGATGGA+TGG | 0.523140 | 7_2:-18841530 | None:intergenic |
| GTGGTGAAAGAATATGTTGA+AGG | 0.526710 | 7_2:-18840508 | None:intergenic |
| TTCATACAGCATTACAAGCA+AGG | 0.534612 | 7_2:+18840823 | Msa1051550:intron |
| CTATGCAGAAAAGAAGAAAG+AGG | 0.536699 | 7_2:+18841433 | Msa1051550:intron |
| CTTTGTTGTGGAATTTGTAG+AGG | 0.540650 | 7_2:-18840120 | None:intergenic |
| GGTTTGAAAATAGGTGTTGG+AGG | 0.543055 | 7_2:-18840099 | None:intergenic |
| AAAGAGTAGAATCTTTGTTG+TGG | 0.545864 | 7_2:-18840132 | None:intergenic |
| AGACTCACCAAGATCAAGAA+AGG | 0.545884 | 7_2:+18845025 | Msa1051550:three_prime_UTR |
| GCAAATAGTGACTAGAAAAG+AGG | 0.546301 | 7_2:-18840075 | None:intergenic |
| TGATGGATGGAGTTGAAGTA+GGG | 0.547063 | 7_2:-18841517 | None:intergenic |
| AAGGGTAAGCTATAACAGTT+GGG | 0.551130 | 7_2:+18840842 | Msa1051550:CDS |
| TGAAAGATCATTATGAAACA+TGG | 0.556613 | 7_2:+18844696 | Msa1051550:CDS |
| GATGGAGTTGAAGTAGGGCT+AGG | 0.557032 | 7_2:-18841512 | None:intergenic |
| TGGGAGTGTTTATCTCCAGA+AGG | 0.557249 | 7_2:+18840861 | Msa1051550:CDS |
| CACCAAGATCAAGAAAGGAA+TGG | 0.559819 | 7_2:+18845030 | Msa1051550:three_prime_UTR |
| GAGGGAATGACAAGAGATGT+GGG | 0.562323 | 7_2:+18841452 | Msa1051550:CDS |
| ATCTTCGAAGTGCAATGACA+TGG | 0.570183 | 7_2:-18839931 | None:intergenic |
| TTTGCATTTGAATTTGAACT+AGG | 0.572177 | 7_2:-18841572 | None:intergenic |
| GGACTGCTTGAACTAAGATA+AGG | 0.574582 | 7_2:-18841491 | None:intergenic |
| TCATACAGCATTACAAGCAA+GGG | 0.583811 | 7_2:+18840824 | Msa1051550:intron |
| CTTGAAATAGAAAAGTCAAG+AGG | 0.585793 | 7_2:+18845206 | Msa1051550:three_prime_UTR |
| GGGAGTGTTTATCTCCAGAA+GGG | 0.586530 | 7_2:+18840862 | Msa1051550:CDS |
| GAAAGATCATTATGAAACAT+GGG | 0.602826 | 7_2:+18844697 | Msa1051550:CDS |
| TATGCAGAAAAGAAGAAAGA+GGG | 0.610950 | 7_2:+18841434 | Msa1051550:intron |
| CTGCTTGAACTAAGATAAGG+AGG | 0.612198 | 7_2:-18841488 | None:intergenic |
| TGTCTTGCAGAATAAACAAG+AGG | 0.624414 | 7_2:-18841029 | None:intergenic |
| GGTTTGCATTAAATTCAAAG+TGG | 0.634839 | 7_2:+18840883 | Msa1051550:CDS |
| TGGTGAAAGAATATGTTGAA+GGG | 0.636354 | 7_2:-18840507 | None:intergenic |
| ACTTTCAGGAGAGGTACCAA+TGG | 0.645021 | 7_2:+18840935 | Msa1051550:CDS |
| GACTAATATCCACAAAAGTG+TGG | 0.645848 | 7_2:-18845129 | None:intergenic |
| CAACTCCATCCATCATAGAG+AGG | 0.653040 | 7_2:+18841525 | Msa1051550:CDS |
| ATGCAATCCACTTTCAGGAG+AGG | 0.654107 | 7_2:+18840926 | Msa1051550:CDS |
| GAAGCTTTAGAGAAGATACA+AGG | 0.659098 | 7_2:+18840315 | Msa1051550:CDS |
| CACCAACAAAGTATTCACGT+TGG | 0.680946 | 7_2:+18845091 | Msa1051550:three_prime_UTR |
| AGGGAATGACAAGAGATGTG+GGG | 0.701802 | 7_2:+18841453 | Msa1051550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTATTTTT+TGG | + | chr7_2:18844226-18844245 | Msa1051550:intron | 0.0% |
| !! | AAAATTAATATTACCTTTAA+GGG | - | chr7_2:18840536-18840555 | None:intergenic | 10.0% |
| !! | AAAAATTAATATTACCTTTA+AGG | - | chr7_2:18840537-18840556 | None:intergenic | 10.0% |
| !! | TATATTTATTGAGAAAAATT+TGG | - | chr7_2:18841624-18841643 | None:intergenic | 10.0% |
| !!! | ATCTGATTTTTTTTTTTTTT+TGG | - | chr7_2:18842125-18842144 | None:intergenic | 10.0% |
| !! | TATAGTAAAAAAATCATAAA+TGG | + | chr7_2:18844034-18844053 | Msa1051550:intron | 10.0% |
| !! | ATTCAAAAAAATTCTATAAT+TGG | - | chr7_2:18844601-18844620 | None:intergenic | 10.0% |
| !! | AAAGAAAATGTAATAATTAA+AGG | + | chr7_2:18844885-18844904 | Msa1051550:exon | 10.0% |
| !! | AAGAAAATGTAATAATTAAA+GGG | + | chr7_2:18844886-18844905 | Msa1051550:exon | 10.0% |
| !! | TTAATTTATCCAAAAAGTTT+AGG | - | chr7_2:18840795-18840814 | None:intergenic | 15.0% |
| !!! | AACTTTTTGGATAAATTAAA+TGG | + | chr7_2:18840796-18840815 | Msa1051550:intron | 15.0% |
| !!! | TTCAATTTTCATATGAATTT+TGG | - | chr7_2:18842203-18842222 | None:intergenic | 15.0% |
| !! | CTATTATATGATGTTATTAT+TGG | - | chr7_2:18843363-18843382 | None:intergenic | 15.0% |
| !! | GTTTATATAATACGAATTAT+TGG | + | chr7_2:18843582-18843601 | Msa1051550:intron | 15.0% |
| !! | AAAGAAAATTATATATGACA+GGG | - | chr7_2:18843692-18843711 | None:intergenic | 15.0% |
| !! | ATAAAATAAAAAATAACACG+TGG | - | chr7_2:18844222-18844241 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTTTTTGGTGT+TGG | + | chr7_2:18844232-18844251 | Msa1051550:intron | 15.0% |
| !!! | TTATTTTATTTTTTGGTGTT+GGG | + | chr7_2:18844233-18844252 | Msa1051550:intron | 15.0% |
| !!! | TTTTGTAATTTTTTTCTTAG+AGG | + | chr7_2:18844293-18844312 | Msa1051550:intron | 15.0% |
| !!! | TTTGTAATTTTTTTCTTAGA+GGG | + | chr7_2:18844294-18844313 | Msa1051550:intron | 15.0% |
| !! | GAAAAAAAAAAAAGTAACAA+CGG | - | chr7_2:18844455-18844474 | None:intergenic | 15.0% |
| !! | TTGTCTTGAAAAGAAATTAT+AGG | - | chr7_2:18840035-18840054 | None:intergenic | 20.0% |
| !!! | AAAGTAATGTACCTTTAAAA+GGG | - | chr7_2:18840391-18840410 | None:intergenic | 20.0% |
| !! | AAAAGTAATGTACCTTTAAA+AGG | - | chr7_2:18840392-18840411 | None:intergenic | 20.0% |
| !!! | CTATATAGTTTGAGTTAAAA+TGG | - | chr7_2:18840417-18840436 | None:intergenic | 20.0% |
| !! | TATATAGTTCATGAATTTCA+TGG | + | chr7_2:18840430-18840449 | Msa1051550:intron | 20.0% |
| !!! | AGAATCATGGTTTTAAATTA+CGG | + | chr7_2:18840610-18840629 | Msa1051550:intron | 20.0% |
| !! | AATAAGCTAAAAACAGTTTA+TGG | - | chr7_2:18841250-18841269 | None:intergenic | 20.0% |
| !! | AACAGATACTAAAATGTTTA+AGG | - | chr7_2:18841695-18841714 | None:intergenic | 20.0% |
| !! | TAGATTACAACATTATAATG+TGG | + | chr7_2:18842289-18842308 | Msa1051550:intron | 20.0% |
| !! | AGATTACAACATTATAATGT+GGG | + | chr7_2:18842290-18842309 | Msa1051550:intron | 20.0% |
| !!! | TTTTGAAATTTCTCATCAAA+TGG | - | chr7_2:18842515-18842534 | None:intergenic | 20.0% |
| !!! | CAAAACAAATTTTGTTCAAT+TGG | - | chr7_2:18842683-18842702 | None:intergenic | 20.0% |
| !!! | TTTCCTAGTTTTTACTAAAT+CGG | + | chr7_2:18842719-18842738 | Msa1051550:intron | 20.0% |
| !! | TATACTATTCATTCATTATC+AGG | + | chr7_2:18843260-18843279 | Msa1051550:intron | 20.0% |
| !! | ATATTATGCTATATACAAAG+TGG | - | chr7_2:18843320-18843339 | None:intergenic | 20.0% |
| !! | TAATAGTCACATTAAACAAA+TGG | + | chr7_2:18843377-18843396 | Msa1051550:intron | 20.0% |
| !! | AAGAAAATTATATATGACAG+GGG | - | chr7_2:18843691-18843710 | None:intergenic | 20.0% |
| !! | CAAAGAAAATTATATATGAC+AGG | - | chr7_2:18843693-18843712 | None:intergenic | 20.0% |
| !! | TGCAATTTAAAAAATTCAGA+TGG | - | chr7_2:18843758-18843777 | None:intergenic | 20.0% |
| !!! | TTGTAGTTTTTTTTCTTAGA+GGG | - | chr7_2:18844108-18844127 | None:intergenic | 20.0% |
| !!! | TTTGTAGTTTTTTTTCTTAG+AGG | - | chr7_2:18844109-18844128 | None:intergenic | 20.0% |
| !!! | TATTTTATTTTTTGGTGTTG+GGG | + | chr7_2:18844234-18844253 | Msa1051550:intron | 20.0% |
| !!! | TGTTTAGAGAAGTTTAATTT+CGG | + | chr7_2:18845002-18845021 | Msa1051550:three_prime_UTR | 20.0% |
| ! | ATTTGTAGAGGTTTGAAAAT+AGG | - | chr7_2:18840111-18840130 | None:intergenic | 25.0% |
| !!! | CAGATTTTAATTTGAGAGAA+TGG | + | chr7_2:18840225-18840244 | Msa1051550:CDS | 25.0% |
| ! | AAAAGGCGAAAGAATAATAA+AGG | + | chr7_2:18840566-18840585 | Msa1051550:intron | 25.0% |
| !!! | TATAAAGAATTTTGAGGTCT+CGG | - | chr7_2:18840697-18840716 | None:intergenic | 25.0% |
| ! | CCTCAAAATTCTTTATATTG+CGG | + | chr7_2:18840700-18840719 | Msa1051550:intron | 25.0% |
| !!! | TATTTTTGGCCTAAACTTTT+TGG | + | chr7_2:18840783-18840802 | Msa1051550:intron | 25.0% |
| ! | ATATCATCTATTGTTTCCAT+AGG | - | chr7_2:18841225-18841244 | None:intergenic | 25.0% |
| ! | TTTGCATTTGAATTTGAACT+AGG | - | chr7_2:18841575-18841594 | None:intergenic | 25.0% |
| ! | AAATGCAAAAACAAAATCTG+AGG | + | chr7_2:18841586-18841605 | Msa1051550:CDS | 25.0% |
| ! | ATAATTCAGTGTAATCATAG+AGG | - | chr7_2:18841895-18841914 | None:intergenic | 25.0% |
| ! | ATGAATTTGATTAAGTGAAC+AGG | + | chr7_2:18841996-18842015 | Msa1051550:intron | 25.0% |
| !!! | TACTTTATTTTTACAGACAC+CGG | - | chr7_2:18842052-18842071 | None:intergenic | 25.0% |
| !!! | CTTTGTTATTTTCTGTTGTT+TGG | + | chr7_2:18842076-18842095 | Msa1051550:intron | 25.0% |
| !! | TGCAAAATTTTCAAACCAAA+AGG | + | chr7_2:18842173-18842192 | Msa1051550:intron | 25.0% |
| !!! | ATGAATTTTGGAATTCCTTT+TGG | - | chr7_2:18842191-18842210 | None:intergenic | 25.0% |
| !! | AAGATTTGATTCTTTTGTCT+TGG | - | chr7_2:18842256-18842275 | None:intergenic | 25.0% |
| ! | GATTACAACATTATAATGTG+GGG | + | chr7_2:18842291-18842310 | Msa1051550:intron | 25.0% |
| ! | CATCCAAAAAGAAAAAAAAG+TGG | + | chr7_2:18842484-18842503 | Msa1051550:intron | 25.0% |
| ! | AAAACTAGGAAAGAGAATAT+TGG | - | chr7_2:18842711-18842730 | None:intergenic | 25.0% |
| ! | TTTACTAAATCGGCATTTAT+TGG | + | chr7_2:18842729-18842748 | Msa1051550:intron | 25.0% |
| ! | TTACTAAATCGGCATTTATT+GGG | + | chr7_2:18842730-18842749 | Msa1051550:intron | 25.0% |
| !!! | TTTTGAAGTGAACTTTTGAA+TGG | - | chr7_2:18842883-18842902 | None:intergenic | 25.0% |
| ! | ATGTTATTATTGGTGAGATA+AGG | - | chr7_2:18843353-18843372 | None:intergenic | 25.0% |
| !! | ATCCTTTAAAGGATAATATC+AGG | - | chr7_2:18843426-18843445 | None:intergenic | 25.0% |
| ! | CTCTTAAATCCAAACAAATT+AGG | + | chr7_2:18843605-18843624 | Msa1051550:intron | 25.0% |
| ! | TTGTAATGAACTAGTACTAA+TGG | - | chr7_2:18843884-18843903 | None:intergenic | 25.0% |
| ! | TACAGTCATATAGATGAAAT+TGG | + | chr7_2:18843907-18843926 | Msa1051550:intron | 25.0% |
| ! | ATGTTCGATATAGATGAAAT+TGG | + | chr7_2:18843998-18844017 | Msa1051550:intron | 25.0% |
| !! | GATGAAATTGGTTTACAATT+AGG | + | chr7_2:18844010-18844029 | Msa1051550:intron | 25.0% |
| !!! | ATTTTATTTTTTGGTGTTGG+GGG | + | chr7_2:18844235-18844254 | Msa1051550:intron | 25.0% |
| ! | ATTAAGCCATCATAAATTAG+CGG | + | chr7_2:18844359-18844378 | Msa1051550:intron | 25.0% |
| !!! | TTCAATCATGTGTCATTTTT+TGG | - | chr7_2:18844552-18844571 | None:intergenic | 25.0% |
| ! | TGAAAGATCATTATGAAACA+TGG | + | chr7_2:18844696-18844715 | Msa1051550:CDS | 25.0% |
| ! | GAAAGATCATTATGAAACAT+GGG | + | chr7_2:18844697-18844716 | Msa1051550:CDS | 25.0% |
| !! | TTTTTCACTTATCACTTCAA+AGG | + | chr7_2:18844856-18844875 | Msa1051550:CDS | 25.0% |
| !! | TTTTCACTTATCACTTCAAA+GGG | + | chr7_2:18844857-18844876 | Msa1051550:CDS | 25.0% |
| ! | TAAAAAATACCGACAAAAGT+TGG | - | chr7_2:18845176-18845195 | None:intergenic | 25.0% |
| ! | TTGGAATTATGATCAATAGA+AGG | + | chr7_2:18845231-18845250 | Msa1051550:three_prime_UTR | 25.0% |
| !!! | AAAGAGGTTTTTTAGAGTGA+AGG | - | chr7_2:18840062-18840081 | None:intergenic | 30.0% |
| AAAGAGTAGAATCTTTGTTG+TGG | - | chr7_2:18840135-18840154 | None:intergenic | 30.0% | |
| TTGAGTTCATAACTCATTCA+TGG | + | chr7_2:18840154-18840173 | Msa1051550:exon | 30.0% | |
| TCTCTTCTTCTTGAACTATA+GGG | - | chr7_2:18840200-18840219 | None:intergenic | 30.0% | |
| ATCTCTTCTTCTTGAACTAT+AGG | - | chr7_2:18840201-18840220 | None:intergenic | 30.0% | |
| AGAGTAACAACAATTCTAGA+AGG | + | chr7_2:18840273-18840292 | Msa1051550:CDS | 30.0% | |
| !! | AACAATTCTAGAAGGTATTC+AGG | + | chr7_2:18840281-18840300 | Msa1051550:CDS | 30.0% |
| TGGTGAAAGAATATGTTGAA+GGG | - | chr7_2:18840510-18840529 | None:intergenic | 30.0% | |
| ! | CATGATTCTAGTTAACAATG+TGG | - | chr7_2:18840599-18840618 | None:intergenic | 30.0% |
| CACATTGTTAACTAGAATCA+TGG | + | chr7_2:18840597-18840616 | Msa1051550:intron | 30.0% | |
| ! | CCGCAATATAAAGAATTTTG+AGG | - | chr7_2:18840703-18840722 | None:intergenic | 30.0% |
| GGTTTGCATTAAATTCAAAG+TGG | + | chr7_2:18840883-18840902 | Msa1051550:CDS | 30.0% | |
| TATATATGCAATCCACTTTC+AGG | + | chr7_2:18840921-18840940 | Msa1051550:CDS | 30.0% | |
| TTTGCTGATAAACATTCCAT+TGG | - | chr7_2:18840954-18840973 | None:intergenic | 30.0% | |
| TTATCAGCAAAAACTCTTAG+TGG | + | chr7_2:18840963-18840982 | Msa1051550:CDS | 30.0% | |
| TCTTCATGTGTGTAAATTGA+TGG | - | chr7_2:18841068-18841087 | None:intergenic | 30.0% | |
| TCTCTTAAATTTCCAATTCC+AGG | + | chr7_2:18841092-18841111 | Msa1051550:CDS | 30.0% | |
| CTTAATTCCAGATTCTACTT+CGG | + | chr7_2:18841133-18841152 | Msa1051550:intron | 30.0% | |
| TAAATAAGTCAATCCGAACA+TGG | - | chr7_2:18841159-18841178 | None:intergenic | 30.0% | |
| TATGCAGAAAAGAAGAAAGA+GGG | + | chr7_2:18841434-18841453 | Msa1051550:intron | 30.0% | |
| AAAAACAAAATCTGAGGAAG+AGG | + | chr7_2:18841592-18841611 | Msa1051550:CDS | 30.0% | |
| !!! | TTTTTTTCACTAAGAGTTGC+TGG | + | chr7_2:18842458-18842477 | Msa1051550:intron | 30.0% |
| !!! | CAGCCACTTTTTTTTCTTTT+TGG | - | chr7_2:18842490-18842509 | None:intergenic | 30.0% |
| CAAAAAGAAAAAAAAGTGGC+TGG | + | chr7_2:18842488-18842507 | Msa1051550:intron | 30.0% | |
| TAACTCTTTAGACAATTGCT+AGG | + | chr7_2:18842536-18842555 | Msa1051550:intron | 30.0% | |
| AACTCTTTAGACAATTGCTA+GGG | + | chr7_2:18842537-18842556 | Msa1051550:intron | 30.0% | |
| CAATCAAGTCATTGTTTCAA+CGG | - | chr7_2:18842657-18842676 | None:intergenic | 30.0% | |
| !! | ATGCCGATTTAGTAAAAACT+AGG | - | chr7_2:18842725-18842744 | None:intergenic | 30.0% |
| GAAAATTGAATCATCGAAGA+GGG | - | chr7_2:18843092-18843111 | None:intergenic | 30.0% | |
| TGAAAATTGAATCATCGAAG+AGG | - | chr7_2:18843093-18843112 | None:intergenic | 30.0% | |
| !!! | AAGTACAGCATTTTTTCATC+AGG | + | chr7_2:18843199-18843218 | Msa1051550:intron | 30.0% |
| !!! | AGTACAGCATTTTTTCATCA+GGG | + | chr7_2:18843200-18843219 | Msa1051550:intron | 30.0% |
| ATTATCAGGACCATATACAA+AGG | + | chr7_2:18843274-18843293 | Msa1051550:intron | 30.0% | |
| ! | CTTTAAAGGATAATATCAGG+AGG | - | chr7_2:18843423-18843442 | None:intergenic | 30.0% |
| CTCCTGATATTATCCTTTAA+AGG | + | chr7_2:18843421-18843440 | Msa1051550:intron | 30.0% | |
| CACATAGCATTATCCTTTAA+AGG | - | chr7_2:18843437-18843456 | None:intergenic | 30.0% | |
| !! | GTGTTTCTACCTAATTTGTT+TGG | - | chr7_2:18843617-18843636 | None:intergenic | 30.0% |
| AATTATATATGACAGGGGAA+TGG | - | chr7_2:18843686-18843705 | None:intergenic | 30.0% | |
| CTGATCTATGCTTAATCTAT+TGG | - | chr7_2:18843844-18843863 | None:intergenic | 30.0% | |
| CAATAGATTAAGCATAGATC+AGG | + | chr7_2:18843842-18843861 | Msa1051550:intron | 30.0% | |
| CCATTTCTCTCTAGATTTAA+CGG | + | chr7_2:18843946-18843965 | Msa1051550:intron | 30.0% | |
| ! | TGTCTCTAAATTTTGTGATG+AGG | + | chr7_2:18844405-18844424 | Msa1051550:intron | 30.0% |
| ! | GTCTCTAAATTTTGTGATGA+GGG | + | chr7_2:18844406-18844425 | Msa1051550:intron | 30.0% |
| ! | AAATTTTGTGATGAGGGAAT+TGG | + | chr7_2:18844412-18844431 | Msa1051550:intron | 30.0% |
| ATGAACCTTGAAACTACATT+TGG | + | chr7_2:18844485-18844504 | Msa1051550:intron | 30.0% | |
| TGAACCTTGAAACTACATTT+GGG | + | chr7_2:18844486-18844505 | Msa1051550:intron | 30.0% | |
| AATGACACATGATTGAAATG+AGG | + | chr7_2:18844555-18844574 | Msa1051550:intron | 30.0% | |
| AGACAAAAAGAGAAAAGAGT+GGG | + | chr7_2:18844720-18844739 | Msa1051550:CDS | 30.0% | |
| GAAGTGATAAGTGAAAAAGA+TGG | - | chr7_2:18844854-18844873 | None:intergenic | 30.0% | |
| GTAATAATTAAAGGGAGAGT+AGG | + | chr7_2:18844894-18844913 | Msa1051550:three_prime_UTR | 30.0% | |
| ! | TAGTTAAATCCACACTTTTG+TGG | + | chr7_2:18845120-18845139 | Msa1051550:three_prime_UTR | 30.0% |
| CTTGAAATAGAAAAGTCAAG+AGG | + | chr7_2:18845206-18845225 | Msa1051550:three_prime_UTR | 30.0% | |
| ATAGAAAAGTCAAGAGGAAT+TGG | + | chr7_2:18845212-18845231 | Msa1051550:three_prime_UTR | 30.0% | |
| ! | TGTGTGACTCTTCTGAATTT+TGG | - | chr7_2:18839973-18839992 | None:intergenic | 35.0% |
| ACACTCTCTTCTTAGAACTT+TGG | + | chr7_2:18840000-18840019 | Msa1051550:five_prime_UTR | 35.0% | |
| GCAAATAGTGACTAGAAAAG+AGG | - | chr7_2:18840078-18840097 | None:intergenic | 35.0% | |
| AGAGGTTTGAAAATAGGTGT+TGG | - | chr7_2:18840105-18840124 | None:intergenic | 35.0% | |
| ! | CTTTGTTGTGGAATTTGTAG+AGG | - | chr7_2:18840123-18840142 | None:intergenic | 35.0% |
| !! | GAAGCTTTAGAGAAGATACA+AGG | + | chr7_2:18840315-18840334 | Msa1051550:CDS | 35.0% |
| TGAAGAAGCAGTACTAGAAA+TGG | - | chr7_2:18840360-18840379 | None:intergenic | 35.0% | |
| GTGGTGAAAGAATATGTTGA+AGG | - | chr7_2:18840511-18840530 | None:intergenic | 35.0% | |
| ! | AATATTACCTTTAAGGGCAG+TGG | - | chr7_2:18840530-18840549 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAAATTACGGTCG+CGG | + | chr7_2:18840616-18840635 | Msa1051550:intron | 35.0% |
| TAAGCTTGCAATTCTAGTCA+TGG | - | chr7_2:18840746-18840765 | None:intergenic | 35.0% | |
| TTCATACAGCATTACAAGCA+AGG | + | chr7_2:18840823-18840842 | Msa1051550:intron | 35.0% | |
| TCATACAGCATTACAAGCAA+GGG | + | chr7_2:18840824-18840843 | Msa1051550:intron | 35.0% | |
| AAGGGTAAGCTATAACAGTT+GGG | + | chr7_2:18840842-18840861 | Msa1051550:CDS | 35.0% | |
| GAATTTAATGCAAACCCTTC+TGG | - | chr7_2:18840879-18840898 | None:intergenic | 35.0% | |
| TGTCTTGCAGAATAAACAAG+AGG | - | chr7_2:18841032-18841051 | None:intergenic | 35.0% | |
| AAAGCATATGAACCTGGAAT+TGG | - | chr7_2:18841107-18841126 | None:intergenic | 35.0% | |
| ! | GAATCAAAAGCATATGAACC+TGG | - | chr7_2:18841113-18841132 | None:intergenic | 35.0% |
| ! | CGAAGTAGAATCTGGAATTA+AGG | - | chr7_2:18841135-18841154 | None:intergenic | 35.0% |
| !! | TTTAGCTTATTTCTAGCAGC+CGG | + | chr7_2:18841259-18841278 | Msa1051550:intron | 35.0% |
| CTATGCAGAAAAGAAGAAAG+AGG | + | chr7_2:18841433-18841452 | Msa1051550:intron | 35.0% | |
| ! | TTTAACCTCTCTATGATGGA+TGG | - | chr7_2:18841533-18841552 | None:intergenic | 35.0% |
| ! | AGCTTTTAACCTCTCTATGA+TGG | - | chr7_2:18841537-18841556 | None:intergenic | 35.0% |
| ! | GTTTTTACTGTGTTTGTGAG+TGG | - | chr7_2:18841743-18841762 | None:intergenic | 35.0% |
| TTAAAGCACAGACACAAACA+CGG | - | chr7_2:18841977-18841996 | None:intergenic | 35.0% | |
| ! | TCTAGGACACAAGAAATTTC+CGG | + | chr7_2:18842030-18842049 | Msa1051550:intron | 35.0% |
| ! | AAATTGAACTAGTCTACCCT+TGG | + | chr7_2:18842215-18842234 | Msa1051550:intron | 35.0% |
| GAAACAAAGAGGGACAAAAT+TGG | - | chr7_2:18842329-18842348 | None:intergenic | 35.0% | |
| GCTTTCACATGAAACAAAGA+GGG | - | chr7_2:18842339-18842358 | None:intergenic | 35.0% | |
| ACCAAAAACTATAGAAGGAG+GGG | - | chr7_2:18842361-18842380 | None:intergenic | 35.0% | |
| GACCAAAAACTATAGAAGGA+GGG | - | chr7_2:18842362-18842381 | None:intergenic | 35.0% | |
| !! | TGATAGGAGGAAAGTATTGA+GGG | - | chr7_2:18842384-18842403 | None:intergenic | 35.0% |
| CACCTTTATGTAGAAGTTGA+GGG | + | chr7_2:18842616-18842635 | Msa1051550:intron | 35.0% | |
| AAGTCATTGTTTCAACGGTA+GGG | - | chr7_2:18842652-18842671 | None:intergenic | 35.0% | |
| CGTTGAAACAATGACTTGAT+TGG | + | chr7_2:18842655-18842674 | Msa1051550:intron | 35.0% | |
| ! | AAGTGAACTTTTGAATGGAG+AGG | - | chr7_2:18842878-18842897 | None:intergenic | 35.0% |
| GTGACTTCAAATGAGACAAA+GGG | - | chr7_2:18843163-18843182 | None:intergenic | 35.0% | |
| AGTGACTTCAAATGAGACAA+AGG | - | chr7_2:18843164-18843183 | None:intergenic | 35.0% | |
| !!! | GTACAGCATTTTTTCATCAG+GGG | + | chr7_2:18843201-18843220 | Msa1051550:intron | 35.0% |
| TAAGTCCACTCCTTTGTATA+TGG | - | chr7_2:18843287-18843306 | None:intergenic | 35.0% | |
| CCGTTAAATCTAGAGAGAAA+TGG | - | chr7_2:18843949-18843968 | None:intergenic | 35.0% | |
| TCTACAGTTTACAGTTGTAG+AGG | + | chr7_2:18843971-18843990 | Msa1051550:intron | 35.0% | |
| AGCATAGACCAAGTCAAAAT+TGG | - | chr7_2:18844176-18844195 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | - | chr7_2:18844261-18844280 | None:intergenic | 35.0% |
| TGCTACAGTTGCAAAAGTTA+GGG | + | chr7_2:18844265-18844284 | Msa1051550:intron | 35.0% | |
| ATCGCAACTTTGTGAAACTT+AGG | + | chr7_2:18844322-18844341 | Msa1051550:intron | 35.0% | |
| TCGCAACTTTGTGAAACTTA+GGG | + | chr7_2:18844323-18844342 | Msa1051550:intron | 35.0% | |
| ! | CGTTTTCCGCTAATTTATGA+TGG | - | chr7_2:18844368-18844387 | None:intergenic | 35.0% |
| GAGACAAAAAGAGAAAAGAG+TGG | + | chr7_2:18844719-18844738 | Msa1051550:CDS | 35.0% | |
| AAGCAACTTTGCAAGCAAAT+AGG | + | chr7_2:18844761-18844780 | Msa1051550:CDS | 35.0% | |
| AGCAACTTTGCAAGCAAATA+GGG | + | chr7_2:18844762-18844781 | Msa1051550:CDS | 35.0% | |
| GAGTAGGTTTGAATGAATGA+TGG | + | chr7_2:18844910-18844929 | Msa1051550:three_prime_UTR | 35.0% | |
| TTCCATTCCTTTCTTGATCT+TGG | - | chr7_2:18845035-18845054 | None:intergenic | 35.0% | |
| GACTAATATCCACAAAAGTG+TGG | - | chr7_2:18845132-18845151 | None:intergenic | 35.0% | |
| ! | ACTGATCAACCAACTTTTGT+CGG | + | chr7_2:18845164-18845183 | Msa1051550:three_prime_UTR | 35.0% |
| ATCTTCGAAGTGCAATGACA+TGG | - | chr7_2:18839934-18839953 | None:intergenic | 40.0% | |
| !! | GGTTTGAAAATAGGTGTTGG+AGG | - | chr7_2:18840102-18840121 | None:intergenic | 40.0% |
| GGGATATGATTCAGCATTGT+AGG | - | chr7_2:18840180-18840199 | None:intergenic | 40.0% | |
| ! | TCACCTGGATACCCTTTTAA+AGG | + | chr7_2:18840377-18840396 | Msa1051550:CDS | 40.0% |
| !! | GTACCTTTAAAAGGGTATCC+AGG | - | chr7_2:18840383-18840402 | None:intergenic | 40.0% |
| CAAGGGTAAGCTATAACAGT+TGG | + | chr7_2:18840841-18840860 | Msa1051550:CDS | 40.0% | |
| GAGACTGATTATAGAGCCTA+TGG | + | chr7_2:18841206-18841225 | Msa1051550:intron | 40.0% | |
| !! | GTTGTTTTCGTAAGCTATCC+TGG | - | chr7_2:18841292-18841311 | None:intergenic | 40.0% |
| CTGCTTGAACTAAGATAAGG+AGG | - | chr7_2:18841491-18841510 | None:intergenic | 40.0% | |
| GGACTGCTTGAACTAAGATA+AGG | - | chr7_2:18841494-18841513 | None:intergenic | 40.0% | |
| ! | TGATGGATGGAGTTGAAGTA+GGG | - | chr7_2:18841520-18841539 | None:intergenic | 40.0% |
| !! | ATGATGGATGGAGTTGAAGT+AGG | - | chr7_2:18841521-18841540 | None:intergenic | 40.0% |
| AATGAAGCACAGAAACTCCT+TGG | + | chr7_2:18841824-18841843 | Msa1051550:intron | 40.0% | |
| TGTAATCATAGAGGCAGTGT+CGG | - | chr7_2:18841886-18841905 | None:intergenic | 40.0% | |
| ATTAAGTGAACAGGATCACC+AGG | + | chr7_2:18842005-18842024 | Msa1051550:intron | 40.0% | |
| TGTCTTGGAAAACACACCAT+TGG | - | chr7_2:18842241-18842260 | None:intergenic | 40.0% | |
| GGCTTTCACATGAAACAAAG+AGG | - | chr7_2:18842340-18842359 | None:intergenic | 40.0% | |
| GGACCAAAAACTATAGAAGG+AGG | - | chr7_2:18842363-18842382 | None:intergenic | 40.0% | |
| GAGGGACCAAAAACTATAGA+AGG | - | chr7_2:18842366-18842385 | None:intergenic | 40.0% | |
| !! | CTGATAGGAGGAAAGTATTG+AGG | - | chr7_2:18842385-18842404 | None:intergenic | 40.0% |
| TGACCAGAAAACAGACTGAT+AGG | - | chr7_2:18842400-18842419 | None:intergenic | 40.0% | |
| CCTCAACTTCTACATAAAGG+TGG | - | chr7_2:18842618-18842637 | None:intergenic | 40.0% | |
| CCACCTTTATGTAGAAGTTG+AGG | + | chr7_2:18842615-18842634 | Msa1051550:intron | 40.0% | |
| GACCCTCAACTTCTACATAA+AGG | - | chr7_2:18842621-18842640 | None:intergenic | 40.0% | |
| CAAGTCATTGTTTCAACGGT+AGG | - | chr7_2:18842653-18842672 | None:intergenic | 40.0% | |
| ACACCATGAGCTACTACTTA+CGG | + | chr7_2:18842780-18842799 | Msa1051550:intron | 40.0% | |
| GTGTCTCATATGATCTACTG+CGG | - | chr7_2:18842856-18842875 | None:intergenic | 40.0% | |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | + | chr7_2:18844082-18844101 | Msa1051550:intron | 40.0% |
| GCACATGTGCAAAACTTAAG+GGG | - | chr7_2:18844136-18844155 | None:intergenic | 40.0% | |
| GGCACATGTGCAAAACTTAA+GGG | - | chr7_2:18844137-18844156 | None:intergenic | 40.0% | |
| TGGCACATGTGCAAAACTTA+AGG | - | chr7_2:18844138-18844157 | None:intergenic | 40.0% | |
| !!! | GTTTTGCACATGTGCCATTT+TGG | + | chr7_2:18844141-18844160 | Msa1051550:intron | 40.0% |
| !! | ACCAAGTCAAAATTGGCCTT+GGG | - | chr7_2:18844169-18844188 | None:intergenic | 40.0% |
| CTGCTACAGTTGCAAAAGTT+AGG | + | chr7_2:18844264-18844283 | Msa1051550:intron | 40.0% | |
| GCTACAGTTGCAAAAGTTAG+GGG | + | chr7_2:18844266-18844285 | Msa1051550:intron | 40.0% | |
| CTACAGTTGCAAAAGTTAGG+GGG | + | chr7_2:18844267-18844286 | Msa1051550:intron | 40.0% | |
| CGCAACTTTGTGAAACTTAG+GGG | + | chr7_2:18844324-18844343 | Msa1051550:intron | 40.0% | |
| GCAACTTTGTGAAACTTAGG+GGG | + | chr7_2:18844325-18844344 | Msa1051550:intron | 40.0% | |
| CTAGCCCAAATGTAGTTTCA+AGG | - | chr7_2:18844493-18844512 | None:intergenic | 40.0% | |
| !! | GAAACTACATTTGGGCTAGT+TGG | + | chr7_2:18844494-18844513 | Msa1051550:intron | 40.0% |
| CAAAAAGAGAAAAGAGTGGG+TGG | + | chr7_2:18844723-18844742 | Msa1051550:CDS | 40.0% | |
| !! | AGCAAATAGGGTGCTTTTCA+TGG | + | chr7_2:18844774-18844793 | Msa1051550:CDS | 40.0% |
| AGACTCACCAAGATCAAGAA+AGG | + | chr7_2:18845025-18845044 | Msa1051550:three_prime_UTR | 40.0% | |
| CACCAAGATCAAGAAAGGAA+TGG | + | chr7_2:18845030-18845049 | Msa1051550:three_prime_UTR | 40.0% | |
| ! | CACCAACAAAGTATTCACGT+TGG | + | chr7_2:18845091-18845110 | Msa1051550:three_prime_UTR | 40.0% |
| TGCCAACGTGAATACTTTGT+TGG | - | chr7_2:18845096-18845115 | None:intergenic | 40.0% | |
| TCTAGTACTGCTTCTTCACC+TGG | + | chr7_2:18840362-18840381 | Msa1051550:CDS | 45.0% | |
| TCTTTCACCACTGCCCTTAA+AGG | + | chr7_2:18840520-18840539 | Msa1051550:CDS | 45.0% | |
| !! | TGGGAGTGTTTATCTCCAGA+AGG | + | chr7_2:18840861-18840880 | Msa1051550:CDS | 45.0% |
| !! | GGGAGTGTTTATCTCCAGAA+GGG | + | chr7_2:18840862-18840881 | Msa1051550:CDS | 45.0% |
| ATGCAATCCACTTTCAGGAG+AGG | + | chr7_2:18840926-18840945 | Msa1051550:CDS | 45.0% | |
| ATTGGTACCTCTCCTGAAAG+TGG | - | chr7_2:18840936-18840955 | None:intergenic | 45.0% | |
| !! | ACTTTCAGGAGAGGTACCAA+TGG | + | chr7_2:18840935-18840954 | Msa1051550:CDS | 45.0% |
| AACATGGCCGAAGTAGAATC+TGG | - | chr7_2:18841143-18841162 | None:intergenic | 45.0% | |
| GATTCTACTTCGGCCATGTT+CGG | + | chr7_2:18841143-18841162 | Msa1051550:intron | 45.0% | |
| AGAGGGAATGACAAGAGATG+TGG | + | chr7_2:18841451-18841470 | Msa1051550:CDS | 45.0% | |
| GAGGGAATGACAAGAGATGT+GGG | + | chr7_2:18841452-18841471 | Msa1051550:CDS | 45.0% | |
| AGGGAATGACAAGAGATGTG+GGG | + | chr7_2:18841453-18841472 | Msa1051550:CDS | 45.0% | |
| CAACTCCATCCATCATAGAG+AGG | + | chr7_2:18841525-18841544 | Msa1051550:CDS | 45.0% | |
| GCACAGAAACTCCTTGGATT+AGG | + | chr7_2:18841830-18841849 | Msa1051550:intron | 45.0% | |
| TATTATCCGTGTCTGCGTGT+CGG | + | chr7_2:18841930-18841949 | Msa1051550:intron | 45.0% | |
| TTTCTTGTGTCCTAGACTCC+TGG | - | chr7_2:18842026-18842045 | None:intergenic | 45.0% | |
| GAAAACACACCATTGGCCAA+GGG | - | chr7_2:18842234-18842253 | None:intergenic | 45.0% | |
| ! | GCCCCTCCTTCTATAGTTTT+TGG | + | chr7_2:18842357-18842376 | Msa1051550:intron | 45.0% |
| CCAGAAAACAGACTGATAGG+AGG | - | chr7_2:18842397-18842416 | None:intergenic | 45.0% | |
| ! | CCTCCTATCAGTCTGTTTTC+TGG | + | chr7_2:18842394-18842413 | Msa1051550:intron | 45.0% |
| ACTCGTCTTCACAACTGAGA+CGG | - | chr7_2:18842759-18842778 | None:intergenic | 45.0% | |
| TCTCCGTAAGTAGTAGCTCA+TGG | - | chr7_2:18842786-18842805 | None:intergenic | 45.0% | |
| TCTGTGTTCGTACTTCGAAC+GGG | - | chr7_2:18842921-18842940 | None:intergenic | 45.0% | |
| GTCTGTGTTCGTACTTCGAA+CGG | - | chr7_2:18842922-18842941 | None:intergenic | 45.0% | |
| CACAAGTGTCTGTGTCGTAT+CGG | + | chr7_2:18843013-18843032 | Msa1051550:intron | 45.0% | |
| GTGTCAGTCACGATACATGT+CGG | + | chr7_2:18843035-18843054 | Msa1051550:intron | 45.0% | |
| !! | CTCTGATTGAAGGCGTGTTT+TGG | - | chr7_2:18843064-18843083 | None:intergenic | 45.0% |
| CAAAACACGCCTTCAATCAG+AGG | + | chr7_2:18843062-18843081 | Msa1051550:intron | 45.0% | |
| CAGGACCATATACAAAGGAG+TGG | + | chr7_2:18843279-18843298 | Msa1051550:intron | 45.0% | |
| GAGAAATGGTGTAGTCGTAG+AGG | - | chr7_2:18843935-18843954 | None:intergenic | 45.0% | |
| ! | TCGCAACTTTGGGAAAGTCA+GGG | - | chr7_2:18844079-18844098 | None:intergenic | 45.0% |
| ! | ATCGCAACTTTGGGAAAGTC+AGG | - | chr7_2:18844080-18844099 | None:intergenic | 45.0% |
| AGGGCCAAAATCGCAACTTT+GGG | - | chr7_2:18844089-18844108 | None:intergenic | 45.0% | |
| CATGTGCAAAACTTAAGGGG+CGG | - | chr7_2:18844133-18844152 | None:intergenic | 45.0% | |
| !! | CAAGTCAAAATTGGCCTTGG+GGG | - | chr7_2:18844167-18844186 | None:intergenic | 45.0% |
| !! | CCAAGTCAAAATTGGCCTTG+GGG | - | chr7_2:18844168-18844187 | None:intergenic | 45.0% |
| ! | GACCAAGTCAAAATTGGCCT+TGG | - | chr7_2:18844170-18844189 | None:intergenic | 45.0% |
| GCATGACATTGATGTGAGAG+TGG | + | chr7_2:18844652-18844671 | Msa1051550:intron | 45.0% | |
| !!! | TAATTTTTTTTTTTAGTAAA+AGG | + | chr7_2:18840549-18840568 | Msa1051550:intron | 5.0% |
| !!! | TTTCTTATATTTTATATTTT+TGG | + | chr7_2:18840769-18840788 | Msa1051550:intron | 5.0% |
| AAGCTATCCTGGAGAGCTAC+CGG | - | chr7_2:18841281-18841300 | None:intergenic | 50.0% | |
| GATGGAGTTGAAGTAGGGCT+AGG | - | chr7_2:18841515-18841534 | None:intergenic | 50.0% | |
| ! | TCCTTGGATTAGGTGTGTCC+TGG | + | chr7_2:18841840-18841859 | Msa1051550:intron | 50.0% |
| ACCAGGACACACCTAATCCA+AGG | - | chr7_2:18841844-18841863 | None:intergenic | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | + | chr7_2:18841846-18841865 | Msa1051550:intron | 50.0% | |
| AACAGGATCACCAGGAGTCT+AGG | + | chr7_2:18842013-18842032 | Msa1051550:intron | 50.0% | |
| ! | ACTAGTCTACCCTTGGCCAA+TGG | + | chr7_2:18842222-18842241 | Msa1051550:intron | 50.0% |
| GGAAAACACACCATTGGCCA+AGG | - | chr7_2:18842235-18842254 | None:intergenic | 50.0% | |
| GAGCTACTACTTACGGAGAG+TGG | + | chr7_2:18842787-18842806 | Msa1051550:intron | 50.0% | |
| GTACTTCGAACGGGAGAACT+AGG | - | chr7_2:18842912-18842931 | None:intergenic | 50.0% | |
| CTGACACAGACACGTCAACA+CGG | + | chr7_2:18842954-18842973 | Msa1051550:intron | 50.0% | |
| GAGGGAGAACCTCTGATTGA+AGG | - | chr7_2:18843074-18843093 | None:intergenic | 50.0% | |
| ! | GCAACTTTGGGAAAGTCAGG+GGG | - | chr7_2:18844077-18844096 | None:intergenic | 50.0% |
| ! | CGCAACTTTGGGAAAGTCAG+GGG | - | chr7_2:18844078-18844097 | None:intergenic | 50.0% |
| GAGGGCCAAAATCGCAACTT+TGG | - | chr7_2:18844090-18844109 | None:intergenic | 50.0% | |
| !!! | CCCCAAGGCCAATTTTGACT+TGG | + | chr7_2:18844165-18844184 | Msa1051550:intron | 50.0% |
| !! | TGACTTGGTCTATGCTGACG+TGG | + | chr7_2:18844180-18844199 | Msa1051550:intron | 50.0% |
| AACACGTGGCACCTCACTTA+GGG | - | chr7_2:18844208-18844227 | None:intergenic | 50.0% | |
| TAACACGTGGCACCTCACTT+AGG | - | chr7_2:18844209-18844228 | None:intergenic | 50.0% | |
| CAGTTGCAAAAGTTAGGGGG+CGG | + | chr7_2:18844270-18844289 | Msa1051550:intron | 50.0% | |
| GAGAGTGGAAATGCATGTGC+AGG | + | chr7_2:18844667-18844686 | Msa1051550:intron | 50.0% | |
| GGAAATGCATGTGCAGGTTG+AGG | + | chr7_2:18844673-18844692 | Msa1051550:intron | 50.0% | |
| ! | GTCGGTGTCTGTGTCGTGTT+CGG | + | chr7_2:18841948-18841967 | Msa1051550:intron | 55.0% |
| !!! | ATGTGCCATTTTGGCCCCCA+AGG | + | chr7_2:18844150-18844169 | Msa1051550:intron | 55.0% |
| !! | ATTGGCCTTGGGGGCCAAAA+TGG | - | chr7_2:18844158-18844177 | None:intergenic | 55.0% |
| ATCAACGCGTGTCCGACACC+AGG | - | chr7_2:18841861-18841880 | None:intergenic | 60.0% | |
| CAGACACCGACACGCAGACA+CGG | - | chr7_2:18841939-18841958 | None:intergenic | 60.0% | |
| CTGACGTGGCACCCTAAGTG+AGG | + | chr7_2:18844194-18844213 | Msa1051550:intron | 60.0% | |
| CTAGCAGCCGGTAGCTCTCC+AGG | + | chr7_2:18841271-18841290 | Msa1051550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 18839879 | 18845308 | 18839879 | ID=Msa1051550;Name=Msa1051550 |
| chr7_2 | mRNA | 18839879 | 18845308 | 18839879 | ID=Msa1051550-mRNA-1;Parent=Msa1051550;Name=Msa1051550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=294|1|1|1|1|1|5|422|307 |
| chr7_2 | exon | 18839879 | 18840398 | 18839879 | ID=Msa1051550-mRNA-1:exon:4152;Parent=Msa1051550-mRNA-1 |
| chr7_2 | exon | 18840497 | 18840541 | 18840497 | ID=Msa1051550-mRNA-1:exon:4153;Parent=Msa1051550-mRNA-1 |
| chr7_2 | exon | 18840832 | 18841113 | 18840832 | ID=Msa1051550-mRNA-1:exon:4154;Parent=Msa1051550-mRNA-1 |
| chr7_2 | exon | 18841441 | 18841613 | 18841441 | ID=Msa1051550-mRNA-1:exon:4155;Parent=Msa1051550-mRNA-1 |
| chr7_2 | exon | 18844689 | 18845308 | 18844689 | ID=Msa1051550-mRNA-1:exon:4156;Parent=Msa1051550-mRNA-1 |
| chr7_2 | five_prime_UTR | 18839879 | 18840172 | 18839879 | ID=Msa1051550-mRNA-1:five_prime_utr;Parent=Msa1051550-mRNA-1 |
| chr7_2 | CDS | 18840173 | 18840398 | 18840173 | ID=Msa1051550-mRNA-1:cds;Parent=Msa1051550-mRNA-1 |
| chr7_2 | CDS | 18840497 | 18840541 | 18840497 | ID=Msa1051550-mRNA-1:cds;Parent=Msa1051550-mRNA-1 |
| chr7_2 | CDS | 18840832 | 18841113 | 18840832 | ID=Msa1051550-mRNA-1:cds;Parent=Msa1051550-mRNA-1 |
| chr7_2 | CDS | 18841441 | 18841613 | 18841441 | ID=Msa1051550-mRNA-1:cds;Parent=Msa1051550-mRNA-1 |
| chr7_2 | CDS | 18844689 | 18844886 | 18844689 | ID=Msa1051550-mRNA-1:cds;Parent=Msa1051550-mRNA-1 |
| chr7_2 | three_prime_UTR | 18844887 | 18845308 | 18844887 | ID=Msa1051550-mRNA-1:three_prime_utr;Parent=Msa1051550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
